rna-KK1_032180

Transcript Overview
Namerna-KK1_032180
Unique Namerna-KK1_032180_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length489
ProductXIAP-associated factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ccpvR0310Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0311Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0316Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0317Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caccL0588Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0446Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0802Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL1082Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0247Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0248Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0254Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0255Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0263Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0264Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0276Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0277Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0286Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvssR0287Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0588Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0873Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL1215Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0183Cicer arietinum
carccL0631Cicer arietinum
ccccaR0327Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0328Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0306Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0307Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun08g110300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.1g223840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr09.1839Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.1g178040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vum_02G00897.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr08.1719Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan04g200800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va07G029580.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg34590.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_03G01100.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014643294.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan07g122600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014649914.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.008G183600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.009G145000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g185600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va04G059530.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_11770.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cc_v2.0_06726.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_032180gene-KK1_032180_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_032180rna-KK1_032180_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_032180_Cc_Asha_v1.0rna-KK1_032180_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:213517..213567rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:213517..213567Cajanus cajanCDS
rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:212143..212280rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:212143..212280Cajanus cajanCDS
rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:211931..212052rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:211931..212052Cajanus cajanCDS
rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:211173..211350rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:211173..211350Cajanus cajanCDS
rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:213517..213567rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:213517..213567Cajanus cajanCDS
rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:212143..212280rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:212143..212280Cajanus cajanCDS
rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:211931..212052rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:211931..212052Cajanus cajanCDS
rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:211173..211350rna-KK1_032180_Cc_Asha_v1.0-CDS-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:211173..211350Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:213517..213567rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:213517..213567Cajanus cajanexon
rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:212143..212280rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:212143..212280Cajanus cajanexon
rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:211931..212052rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:211931..212052Cajanus cajanexon
rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:211173..211350rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571847872:211173..211350Cajanus cajanexon
rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:213517..213567rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:213517..213567Cajanus cajanexon
rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:212143..212280rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:212143..212280Cajanus cajanexon
rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:211931..212052rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:211931..212052Cajanus cajanexon
rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:211173..211350rna-KK1_032180_Cc_Asha_v1.0-exon-Scaffold000248-KQ483564.1_Cc_Asha_v1.0-1571082112:211173..211350Cajanus cajanexon


Homology
BLAST of rna-KK1_032180 vs. DB:Swiss
Match: XAF1_HUMAN (XIAP-associated factor 1 OS=Homo sapiens OX=9606 GN=XAF1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.073e-14
Identity = 37/111 (33.33%), Postives = 56/111 (50.45%), Query Frame = 1
Query:    4 VPKLRAEEHYLNTHAPVSCSLCSETMERDILDIHRGENCIRRMVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNRIQDNSAGSSRYVRPAERD 336
            VPK   EEH    H  V C++C ++M++  L+ H+   C  R V C+FC+  +    L  H+  CG+RTELC  C +++  R    H D C R +    G    +   ER+
Sbjct:   41 VPKETMEEHCKLEHQQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQHRDVC-RSEQAQLGKGERISAPERE 150          
BLAST of rna-KK1_032180 vs. DB:Swiss
Match: XAF1_BOVIN (XIAP-associated factor 1 OS=Bos taurus OX=9913 GN=XAF1 PE=2 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 1.149e-11
Identity = 35/91 (38.46%), Postives = 49/91 (53.85%), Query Frame = 1
Query:   22 EEHYLNTHAPVSCSLCSETMERDILDIHRGENCIRRMVTCEFCEFP--LPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNRIQ 288
            EEH    H  V C++C +++ +  LD H  + C  R V C+FC+    L  +DL EH   CG +TELC  C ++V LR    H + C R Q
Sbjct:   47 EEHCQGGHQQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEHH--CGQQTELCPDCGQHVMLRVLARHREECQREQ 135          
BLAST of rna-KK1_032180 vs. DB:Swiss
Match: TRAD1_MOUSE (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Trafd1 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.251e-10
Identity = 31/96 (32.29%), Postives = 50/96 (52.08%), Query Frame = 1
Query:    4 VPKLRAEEHYLNTHAPVSCSLCSETMERDILDIHRGENCIRRMVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNRIQD 291
             PK   + H    H  V+C  C++ +E+  L  H    C  R+  C+ C+  L  + L EH++ CG RTELC  C + V ++E   H + C R+++
Sbjct:   46 FPKSDMDIHMAAEHCQVTCK-CNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELKTHPEVCGRVEE 140          
BLAST of rna-KK1_032180 vs. DB:Swiss
Match: TRAD1_RAT (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Trafd1 PE=1 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 2.744e-10
Identity = 31/95 (32.63%), Postives = 49/95 (51.58%), Query Frame = 1
Query:    7 PKLRAEEHYLNTHAPVSCSLCSETMERDILDIHRGENCIRRMVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNRIQD 291
            PK   + H    H  V+C  C++ +E+  L  H    C  R+  C+ C+  L  + L EH++ CG RTELC  C + V ++E   H   C R+++
Sbjct:   47 PKSDMDIHVATEHCQVTCK-CNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELQTHPAVCGRVEE 140          
BLAST of rna-KK1_032180 vs. DB:Swiss
Match: TRAD1_BOVIN (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus OX=9913 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.180e-9
Identity = 30/93 (32.26%), Postives = 47/93 (50.54%), Query Frame = 1
Query:    4 VPKLRAEEHYLNTHAPVSCSLCSETMERDILDIHRGENCIRRMVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNR 282
             PK   E H    H  V+C  C++ +E+  L  H    C  R+  C+ C+  L  + L +H++ CG RTELC  C + V +++   H + C R
Sbjct:   46 FPKCDMETHMATEHCQVTCK-CNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTCGRNVLVKDLKTHPEVCGR 137          
BLAST of rna-KK1_032180 vs. DB:Swiss
Match: TRAD1_MACFA (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.187e-7
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 1
Query:    4 VPKLRAEEHYLNTHAPVSCSLCSETMERDILDIHRGENCIRRMVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNR 282
             PK   E H    H  V+C  C++ +E+ +L  H    C  R+  C+ C+  L  + L EH++ CG RTELC  C + V +++   H + C R
Sbjct:   46 FPKSDMETHMAAEHCQVTCK-CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVCGR 137          
BLAST of rna-KK1_032180 vs. DB:Swiss
Match: TRAD1_HUMAN (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRAFD1 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.245e-7
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 1
Query:    4 VPKLRAEEHYLNTHAPVSCSLCSETMERDILDIHRGENCIRRMVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNR 282
             PK   E H    H  V+C  C++ +E+ +L  H    C  R+  C+ C+  L  + L EH++ CG RTELC  C + V +++   H + C R
Sbjct:   46 FPKSDMETHMAAEHCQVTCK-CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVCGR 137          
The following BLAST results are available for this feature:
BLAST of rna-KK1_032180 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
XAF1_HUMAN1.073e-1433.33XIAP-associated factor 1 OS=Homo sapiens OX=9606 G... [more]
XAF1_BOVIN1.149e-1138.46XIAP-associated factor 1 OS=Bos taurus OX=9913 GN=... [more]
TRAD1_MOUSE1.251e-1032.29TRAF-type zinc finger domain-containing protein 1 ... [more]
TRAD1_RAT2.744e-1032.63TRAF-type zinc finger domain-containing protein 1 ... [more]
TRAD1_BOVIN1.180e-932.26TRAF-type zinc finger domain-containing protein 1 ... [more]
TRAD1_MACFA1.187e-733.33TRAF-type zinc finger domain-containing protein 1 ... [more]
TRAD1_HUMAN1.245e-733.33TRAF-type zinc finger domain-containing protein 1 ... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 14..68
e-value: 1.8E-7
score: 33.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..128

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_032180_Cc_Asha_v1.0 ID=rna-KK1_032180_Cc_Asha_v1.0; Name=rna-KK1_032180; organism=Cajanus cajan; type=mRNA; length=489bp
ATGGTTCCGAAACTACGTGCTGAGGAGCACTATTTAAACACCCATGCCCC
GGTTTCCTGTTCGTTGTGCAGTGAGACTATGGAACGTGATATTTTAGATA
TCCATAGAGGTGAAAATTGTATTAGAAGAATGGTCACATGTGAGTTTTGT
GAGTTTCCTTTGCCAGCAATTGATCTGGCTGAGCATCAGGAAGTATGCGG
GAATCGAACAGAACTTTGTCACCTTTGTAACAAATATGTTAGACTGCGTG
AAAGATACAACCATGAAGATAGTTGCAACAGAATTCAAGACAATTCTGCA
GGGTCGTCAAGGTACGTCAGGCCAGCTGAAAGAGATGATGGTGCTCAAAG
AAGGCCACGGCCACGGCCACGGCCACAAAATGATTTATCAAAAAGACGTC
TTCTTTTCACAATAGCAATTACTGGTATTGCTGTTATGCTCGGATCCATT
TTTTTCCAGAGAAAGACAGATCCCAGCAGTGTGCAATAG
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protein sequence of rna-KK1_032180_Cc_Asha_v1.0

>rna-KK1_032180_Cc_Asha_v1.0 ID=rna-KK1_032180_Cc_Asha_v1.0; Name=rna-KK1_032180_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=162bp
MVPKLRAEEHYLNTHAPVSCSLCSETMERDILDIHRGENCIRRMVTCEFC
EFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNRIQDNSA
GSSRYVRPAERDDGAQRRPRPRPRPQNDLSKRRLLFTIAITGIAVMLGSI
FFQRKTDPSSVQ
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mRNA from alignment at Scaffold000248-KQ483564.1:211173..213567-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_032180_Cc_Asha_v1.0 ID=rna-KK1_032180_Cc_Asha_v1.0; Name=rna-KK1_032180; organism=Cajanus cajan; type=mRNA; length=2395bp; location=Sequence derived from: Scaffold000248-KQ483564.1:211173..213567- (Cajanus cajan
ATGGTTCCGAAACTACGTGCTGAGGAGCACTATTTAAACACCCATGCCCC GGTATGGAAACTTTTGATTTTGTTTTATTCCTTCGTTTTTAGGTCAGAGA AATTACTGGCAAACACAAACCTATAAGTTGAGAAGTTCATGGTACTTAGT GCTGAAGAAAAAATGGAGAATAAATACAAGAGATTTTGAGTTTATTTTGA AAATTTTTCTGCGTCTAAAAGTGATGTCTCATTTGGCTCTTATTTGAACC AAAATAAAATTGGTTTGATAATAGGTAGGGGTGGAAAATGATCCCCCAAT CCATGTATCATTCAATCCAACTCATCTAGTTATGACAATAGATCTAATGA GTCGGATTTTTCAGATCTATTCTGTTTATAATGGTTATGGGGTCACCTCA CCAGTTTGAAAGTTGTAACAGTAGCTTTTAGAAAATATTTTATAATTTCC TTTTCCCCCTCATTTTTCCCCATGCTTTCCTAATGTAAATTTGAAAACAA CCTAATAAAAACATAGTTAATTTAATTTGAACAAAAATGATAACCCAACT GTATCCGTATGTAATTTAATTCTTAACTGAAAGTAGTAATTTTGTGGATC CTGAACTGTGACATAAGAGAATGGCAGAGTTCTAATTCCATCGAAATATA AAAATTAGAAAAAATAATAATAGATGGACTGGATTGAAAAATCTTTACTA TCATGGCTTCTAAGTTATTGGTGCTTTAGTTCTTATATTTGGGTTATACC CCAATCAGGTGTTGGTTCAACATTGTTTTTAAGATAATTGTGGTTTATAG GGAATATATATTGGTCGGTGGGAATTTTAGTTGTTTAAAGGATTCTTACT TGGATATTTTGTATGCAGTTGATACAGCAGGATAGGTAAAGCTTTAGTAC TTGAGTATAAAGATATAAAGATTACTTATTTAAGCAGATCCTGAAATTTC CCCTTACTATGTAAATATGGCTTTAATTTTCAGTAATCATGTATGGAATG GGGATTAGATGGAAATTTTGCAGTAACATGTTGATAATTTATTGAACCAG TCCTAGTTTTACTGTGTCATCTATATAATATGAAGGTGCCTATCATATCA TAGAGGGTAGAAACTTGGAGTGTCAAGTCCATATGCTAAAGGAGGCTGGC TACATGCTCATCGGTTCCTTCCCAGGGGTCCCCCTTCACCTTCTCCCCCC ATAGCACACTAAAACACAGTTCATGAAGTCAGATTTAAATTTCACATTTG CAATGGTTATTCAAAAGAAAAATGTCAATTTGTGCAGGTTTCCTGTTCGT TGTGCAGTGAGACTATGGAACGTGATATTTTAGATATCCATAGAGGTGAA AATTGTATTAGAAGAATGGTCACATGTGAGTTTTGTGAGTTTCCTTTGCC AGCAATTGATCTGGCTGAGCATCAGGTAGTGTTCATAAAGAACTTTTTGC ATTAAGAATGTTATATTAATCAATGTACTCGGGTACTACTTTCAGTTTGA TTTTTGAACATTCAGGAAGTATGCGGGAATCGAACAGAACTTTGTCACCT TTGTAACAAATATGTTAGACTGCGTGAAAGATACAACCATGAAGATAGTT GCAACAGAATTCAAGACAATTCTGCAGGGTCGTCAAGGTAGGAAATTTCG TAATTTGATTGTAGTATGTGTTTGAATTAGATTATTTTTGTGCTTCAAAA AGCTATATGATCAAAAGTTCCTTGTCAGAGCTTTGGGAGGAAAAAAAAAG TGACTATTTTCCTCAAAATAATAAAAAAAATGCACTGGCCAAAAATTATT TCTTAATGCATCTTATGAGGATTAGGGATGGATGTTAAGGATGTAACAAT AACTTACAGCATCCAACGGTATTTCTTTTATTCCACTAAACTACCATTTT TCCTCTAAAGGTACAAGTGACATCAATGCGGTCTTTTAATATTTATTTTT ACAACAAATTAGTTCTCAAGATTTTGAAGGATATAAAAAAGTGGTCCTTT TATCAGGCTCCGTGTGACATCAACTTGAATTATTGTTCAATAAATCTTTA GGGGACTGTTTTTTAATATCACTTAGTATCTTGGAAGGCCAAACCGATGC CAAGTGTATCTTTCGAGCACTAAAATGATAGTGTAATAAATTTAGGTCAC TGATGAGGATGATGGGCGATTGTCATTTATTGTAATTGAATTATTTACTT GTAATTTTTGTGTGAAGGTACGTCAGGCCAGCTGAAAGAGATGATGGTGC TCAAAGAAGGCCACGGCCACGGCCACGGCCACAAAATGATTTATCAAAAA GACGTCTTCTTTTCACAATAGCAATTACTGGTATTGCTGTTATGCTCGGA TCCATTTTTTTCCAGAGAAAGACAGATCCCAGCAGTGTGCAATAG
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Coding sequence (CDS) from alignment at Scaffold000248-KQ483564.1:211173..213567-

>rna-KK1_032180_Cc_Asha_v1.0 ID=rna-KK1_032180_Cc_Asha_v1.0; Name=rna-KK1_032180; organism=Cajanus cajan; type=CDS; length=978bp; location=Sequence derived from: Scaffold000248-KQ483564.1:211173..213567- (Cajanus cajan
ATGGTTCCGAAACTACGTGCTGAGGAGCACTATTTAAACACCCATGCCCC
GATGGTTCCGAAACTACGTGCTGAGGAGCACTATTTAAACACCCATGCCC
CGGTTTCCTGTTCGTTGTGCAGTGAGACTATGGAACGTGATATTTTAGAT
ATCCATAGAGGTGAAAATTGTATTAGAAGAATGGTCACATGTGAGTTTTG
TGAGTTTCCTTTGCCAGCAATTGATCTGGCTGAGCATCAGGTTTCCTGTT
CGTTGTGCAGTGAGACTATGGAACGTGATATTTTAGATATCCATAGAGGT
GAAAATTGTATTAGAAGAATGGTCACATGTGAGTTTTGTGAGTTTCCTTT
GCCAGCAATTGATCTGGCTGAGCATCAGGAAGTATGCGGGAATCGAACAG
AACTTTGTCACCTTTGTAACAAATATGTTAGACTGCGTGAAAGATACAAC
CATGAAGATAGTTGCAACAGAATTCAAGACAATTCTGCAGGGTCGTCAAG
GAAGTATGCGGGAATCGAACAGAACTTTGTCACCTTTGTAACAAATATGT
TAGACTGCGTGAAAGATACAACCATGAAGATAGTTGCAACAGAATTCAAG
ACAATTCTGCAGGGTCGTCAAGGTACGTCAGGCCAGCTGAAAGAGATGAT
GGTGCTCAAAGAAGGCCACGGCCACGGCCACGGCCACAAAATGATTTATC
AAAAAGACGTCTTCTTTTCACAATAGCAATTACTGGTATTGCTGTTATGC
TCGGATCCATTTTTTTCCAGAGAAAGACAGATCCCAGCAGTGTGCAATAG
GTACGTCAGGCCAGCTGAAAGAGATGATGGTGCTCAAAGAAGGCCACGGC
CACGGCCACGGCCACAAAATGATTTATCAAAAAGACGTCTTCTTTTCACA
ATAGCAATTACTGGTATTGCTGTTATGCTCGGATCCATTTTTTTCCAGAG
AAAGACAGATCCCAGCAGTGTGCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD