rna-KK1_040519
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana OX=3702 GN=PER39 PE=1 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 9.487e-139 Identity = 192/265 (72.45%), Postives = 217/265 (81.89%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNSTT--KQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGVISP-EIAXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEVTQLLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVN 786 MHFHDCFVRGCDGS+L+N+T+ +Q EK APPNLTVRGFDFID++KS +E++CPG+VSCADI+TLA RDSIVA GGP W VPTGRRDG IS A IP PF NFTTL TLF NQGLD+KDLVLLSGAHTIGVSHCSS SNRLFNFTG GDQDPSLDSEYA NLK +C +I DNTTK+EMDPGSR TFDL YYR V+K RGLFESDAAL N ++V + GS + FFAEF+ SMEKMGRI VKTG++GEIR+ CA VN Sbjct: 62 MHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana OX=3702 GN=PER3 PE=2 SV=1) HSP 1 Score: 391.734 bits (1005), Expect = 6.066e-137 Identity = 183/264 (69.32%), Postives = 218/264 (82.58%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNSTTKQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGVISPEI-AXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEVTQLLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVNS 789 MHFHDCFVRGCDGSVL+NST+ AE++A PNLTVRGF FID IKS++EA+CPG+VSCADI+ LA+RD++V TGGP W VPTGRRDG IS A IP P N T LQTLF+NQGLDLKDLVLLSGAHTIGVSHCSS +NRL+NFTG+G QDP+LDSEYAANLK KC ++NDN T +EMDPGSRKTFDL YY+ V+K RGLF+SD+AL TN T S + ++L GS+ +FF+EFA SMEKMGRI VKTG+ G +R+ C++ NS Sbjct: 63 MHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVANS 326
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana OX=3702 GN=PER30 PE=1 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 2.804e-129 Identity = 175/264 (66.29%), Postives = 210/264 (79.55%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNSTTKQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGVISPEI-AXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEVTQLLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVNS 789 MHFHDCFVRGCDGSVL+NST+ AE++APPNLT+RGF F++RIK+L+E CP VSCADI+ L ARD++VATGGP W VPTGRRDG IS + A IP P NFTTLQ LF NQGL+LKDLVLLSGAHTIGVSHCSS++ RL+NF+ QDPSLDS+YAANLK KCK++NDN+T +EMDPGS ++FDL YYR V+K RGLF+SD+AL TNS T + L+ GS + FF FA SMEKMGR+KVKTG+ G IR C++ S Sbjct: 66 MHFHDCFVRGCDGSVLINSTSGNAERDAPPNLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRCSVAGS 329
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana OX=3702 GN=PER56 PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 1.816e-104 Identity = 152/263 (57.79%), Postives = 191/263 (72.62%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNSTTKQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGVISPEI-AXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEVTQLLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVN 786 M FHDCFVRGC+GSVLL K+ EKN+ PNLT+RGF+ ID +K+ +E ECPG+VSC+D+L L ARD++VA GP W+V TGRRDG+++ A +P+PF+N ++L T F ++GLD KDLV+LSG HTIG HC ++NRL+NFTGKGD DP+LD+EYA L R KCK D TT +EMDPGS KTFD Y++ V + RGLF+SDAALL N TKS V + L FF +F SM KMGRI V TG GE+RK C +VN Sbjct: 69 MFFHDCFVRGCEGSVLLELKNKKDEKNSIPNLTLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKL-RGKCKP-TDTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PRX74 PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 2.687e-103 Identity = 151/267 (56.55%), Postives = 190/267 (71.16%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNST-TKQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGVISPEIAXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTG---KGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEVTQLLQGSLEN-FFAEFATSMEKMGRIKVKTGTEGEIRKHCALVN 786 MHFHDCFVRGCDGSVLL+S AEK+A PN T+RGF F++R+K+ VE CPG VSCAD+L L ARD++ + GPFW VP GRRDG +S +P P NFT L +F+ + LDLKDLV+LS HTIG SHC S ++RL+NFTG D DP+L+ +Y A L R KC ++ DNTT +EMDPGS KTFDLGY++ V K RGLF SD LLTN T++ V + G ++ FFA+FA SM KMG ++V TG++GEIRK C +VN Sbjct: 61 MHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQLPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARL-RSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana OX=3702 GN=PER27 PE=1 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 6.571e-103 Identity = 155/262 (59.16%), Postives = 187/262 (71.37%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNSTTKQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGVISPEIAXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEVTQLLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVN 786 M FHDCFVRGCDGSVLL+ Q EK+A PNL++RGF ID K+ +E CPG+VSC+DIL L ARD++VA GP W+V TGRRDG +S I +P+PF N T L + F ++GL+ KDLV+LSG HTIG+ HC L+NRL+NFTGKGD DPSLDSEYAA L++ KCK D TT +EMDPGS KTFDL Y+ V K RGLF+SDAALL NS T++ V Q ++ FF +F SM KMGR V TG GEIRK C N Sbjct: 63 MFFHDCFVRGCDGSVLLDKPNNQGEKSAVPNLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVS-NINEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRK-KCKP-TDTTTALEMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER2_ARATH (Peroxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PER2 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.701e-89 Identity = 135/265 (50.94%), Postives = 183/265 (69.06%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNSTTKQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGVISP-EIAXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEV-TQ-LLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVN 786 MHFHDCFVRGCDGSVLL S AE++A PNLT++G++ +D K+ +E +CP ++SCAD+L L ARD++ GGP+W VP GRRDG IS A +P+PF + TL+ F+N+GL+ KDLV+LSG HTIG+S C+ +++RL+NFTGKGD DPS++ Y LKR KC D T + MDPGS TFD Y++ V + +GLF SD+ LL + TK+ V TQ +L +F +F+ SM K+G +++ TG GEIRK CA N Sbjct: 63 MHFHDCFVRGCDGSVLLKSAKNDAERDAVPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKR-KCPP-TDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER1_ARATH (Peroxidase 1 OS=Arabidopsis thaliana OX=3702 GN=PER1 PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.701e-89 Identity = 135/265 (50.94%), Postives = 183/265 (69.06%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNSTTKQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGVISP-EIAXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEV-TQ-LLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVN 786 MHFHDCFVRGCDGSVLL S AE++A PNLT++G++ +D K+ +E +CP ++SCAD+L L ARD++ GGP+W VP GRRDG IS A +P+PF + TL+ F+N+GL+ KDLV+LSG HTIG+S C+ +++RL+NFTGKGD DPS++ Y LKR KC D T + MDPGS TFD Y++ V + +GLF SD+ LL + TK+ V TQ +L +F +F+ SM K+G +++ TG GEIRK CA N Sbjct: 63 MHFHDCFVRGCDGSVLLKSAKNDAERDAVPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKR-KCPP-TDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana OX=3702 GN=PER15 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.370e-79 Identity = 128/266 (48.12%), Postives = 171/266 (64.29%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNST-TKQAEKNAPPN-LTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDGV-ISPEIAXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEVTQLLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVNS 789 +HFHDCFV+GCDGS+LL+++ + EKN+ PN + RGF+ +D IK+ +E ECP VSCAD LTLAARDS V TGGP W VP GRRD S + IPAP + F T+ T F+NQGLDL D+V LSG+HTIG S C+S RL+N +G G D +L+ YAANL++ +C + E+D S FD Y++ +I+N GL SD L +++ E+ + E FF +FA SM KMG I TG+ GEIRK+C +N+ Sbjct: 73 LHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQ-RCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKINN 337
BLAST of rna-KK1_040519 vs. DB:Swiss
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana OX=3702 GN=PER49 PE=2 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 4.695e-79 Identity = 128/266 (48.12%), Postives = 175/266 (65.79%), Query Frame = 1 Query: 1 MHFHDCFVRGCDGSVLLNSTTKQA-EKNAPPN-LTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDSIVATGGPFWKVPTGRRDG-VISPEIAXXXIPAPFHNFTTLQTLFSNQGLDLKDLVLLSGAHTIGVSHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKRFKCKNINDNTTKIEMDPGSRKTFDLGYYRQVIKNRGLFESDAALLTNSVTKSEVTQLLQGSLENFFAEFATSMEKMGRIKVKTGTEGEIRKHCALVNS 789 +HFHDCFV+GCDGS+LL+S+ + A EKN+ PN + RGFD +D+IK+ +E +CPG VSCAD+LTLAARDS V TGGP W VP GRRD S + IPAP + F T+ + F+ QGLD+ DLV LSG+HTIG S C+S RL+N +G G D +L+ +AANL++ K+ D + +D S +FD Y++ +I+N+GL SD L +++ E+ + FF +FA SM KMG I TG+ GEIRK+C +NS Sbjct: 67 LHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSV-LDIISAASFDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKINS 331 The following BLAST results are available for this feature:
BLAST of rna-KK1_040519 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_040519_Cc_Asha_v1.0 ID=rna-KK1_040519_Cc_Asha_v1.0; Name=rna-KK1_040519; organism=Cajanus cajan; type=mRNA; length=795bpback to top protein sequence of rna-KK1_040519_Cc_Asha_v1.0 >rna-KK1_040519_Cc_Asha_v1.0 ID=rna-KK1_040519_Cc_Asha_v1.0; Name=rna-KK1_040519_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=264bpback to top mRNA from alignment at Scaffold000230-KQ484021.1:71808..73390- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_040519_Cc_Asha_v1.0 ID=rna-KK1_040519_Cc_Asha_v1.0; Name=rna-KK1_040519; organism=Cajanus cajan; type=mRNA; length=1583bp; location=Sequence derived from: Scaffold000230-KQ484021.1:71808..73390- (Cajanus cajanback to top Coding sequence (CDS) from alignment at Scaffold000230-KQ484021.1:71808..73390- >rna-KK1_040519_Cc_Asha_v1.0 ID=rna-KK1_040519_Cc_Asha_v1.0; Name=rna-KK1_040519; organism=Cajanus cajan; type=CDS; length=1590bp; location=Sequence derived from: Scaffold000230-KQ484021.1:71808..73390- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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