rna-KK1_027606

Transcript Overview
Namerna-KK1_027606
Unique Namerna-KK1_027606_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length507
ProductTranscription factor RF2b
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0309Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR271Pisum sativum Cameor genome v1aPisum sativum
ccpvR0415Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0417Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0418Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asccL0554Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0335Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0341Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0342Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0345Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0347Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0367Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0368Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0382Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvssR0383Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjccL0581Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ccccaR0446Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0447Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0412Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0414Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Va02G063280.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_11G01013.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014647274.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg45696.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun04g134900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.1g113800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan02g204200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr04.1313.1.6211316fVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014657502.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr07.690Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g218000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_08G00726.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.007G079000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_18228.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cc_v2.0_04640.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_027606gene-KK1_027606_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_027606rna-KK1_027606_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_027606_Cc_Asha_v1.0rna-KK1_027606_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_027606_Cc_Asha_v1.0-CDS-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571847872:55765..56057rna-KK1_027606_Cc_Asha_v1.0-CDS-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571847872:55765..56057Cajanus cajanCDS
rna-KK1_027606_Cc_Asha_v1.0-CDS-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571847872:54636..54849rna-KK1_027606_Cc_Asha_v1.0-CDS-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571847872:54636..54849Cajanus cajanCDS
rna-KK1_027606_Cc_Asha_v1.0-CDS-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571082112:55765..56057rna-KK1_027606_Cc_Asha_v1.0-CDS-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571082112:55765..56057Cajanus cajanCDS
rna-KK1_027606_Cc_Asha_v1.0-CDS-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571082112:54636..54849rna-KK1_027606_Cc_Asha_v1.0-CDS-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571082112:54636..54849Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_027606_Cc_Asha_v1.0-exon-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571847872:55765..56057rna-KK1_027606_Cc_Asha_v1.0-exon-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571847872:55765..56057Cajanus cajanexon
rna-KK1_027606_Cc_Asha_v1.0-exon-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571847872:54636..54849rna-KK1_027606_Cc_Asha_v1.0-exon-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571847872:54636..54849Cajanus cajanexon
rna-KK1_027606_Cc_Asha_v1.0-exon-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571082112:55765..56057rna-KK1_027606_Cc_Asha_v1.0-exon-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571082112:55765..56057Cajanus cajanexon
rna-KK1_027606_Cc_Asha_v1.0-exon-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571082112:54636..54849rna-KK1_027606_Cc_Asha_v1.0-exon-Scaffold000350-KQ483452.1_Cc_Asha_v1.0-1571082112:54636..54849Cajanus cajanexon


Homology
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: RF2B_ORYSJ (Transcription factor RF2b OS=Oryza sativa subsp. japonica OX=39947 GN=RF2b PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.842e-18
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1 
Query:  226 VKKALAPEQLAELAIVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQ 426
             KKA+ PEQL+ELA +DPKR KRILANRQSAA+SKERK R++ EL++KVQ L+ + T  +  +T+ Q
Sbjct:  116 AKKAMTPEQLSELAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQ 182
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: BZP18_ARATH (bZIP transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=BZIP18 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.410e-17
Identity = 44/90 (48.89%), Postives = 64/90 (71.11%), Query Frame = 1 
Query:  157 RRRNKIPVGASSRASFKGETVSLVKKALAPEQLAELAIVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQ 426
            R R+ + V  SS      E++   KKA+AP++LAEL +VDPKR KRI+ANRQSAA+SKERK R++ EL++KVQ L+ + T  +  +++ Q
Sbjct:  114 RHRHSLSVDGSSTL----ESIE-AKKAMAPDKLAELWVVDPKRAKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLFQ 198
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: RF2A_ORYSJ (Transcription factor RF2a OS=Oryza sativa subsp. japonica OX=39947 GN=RF2a PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.681e-17
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:  178 VGASSRASFKGETVSLVKKALAPEQLAELAIVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQ 426
            VGAS     +G + +  KKA++  +LAELA+VDPKR KRI ANRQSAA+SKERKMR++ EL++KVQ L+ + T  +  + +LQ
Sbjct:  151 VGAS--PGTEGMSSAEAKKAVSAAKLAELALVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLALLQ 231
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: VIP1_ARATH (Transcription factor VIP1 OS=Arabidopsis thaliana OX=3702 GN=VIP1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.795e-17
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 1 
Query:  196 ASFKGETVSLVKKALAPEQLAELAIVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQ 426
            AS  G+        +  ++LAELA++DPKR KRILANRQSAA+SKERK+R+  EL++KVQ L+ + T  +  VTMLQ
Sbjct:  168 ASVSGKDSGKKNMGMGGDRLAELALLDPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQ 244
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: POF21_ARATH (Probable transcription factor PosF21 OS=Arabidopsis thaliana OX=3702 GN=POSF21 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.123e-15
Identity = 37/67 (55.22%), Postives = 53/67 (79.10%), Query Frame = 1 
Query:  226 VKKALAPEQLAELAIVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQ 426
             KK+++  +LAELA++DPKR KRI ANRQSAA+SKERK R++ EL++KVQ L+ + T  +  +T+LQ
Sbjct:  185 AKKSMSATKLAELALIDPKRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQ 251
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: BZP02_ORYSJ (Basic leucine zipper 2 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP02 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.918e-9
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 1 
Query:  205 KGETVSLVKKA--LAPEQLAELAIVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQVYVFLFNLSSGNL 465
            KGET     +     P Q A  A VDPKRVKRILANRQSA +S+ RK++++ EL++ V  L+ + +  +  V  L     L  L + +L
Sbjct:  163 KGETDEAQSECDGATPGQPASPATVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRSLLTLGNSHL 251
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: BZP34_ARATH (Basic leucine zipper 34 OS=Arabidopsis thaliana OX=3702 GN=BZIP34 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 2.083e-7
Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 1 
Query:  268 IVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQVYVFLFNLSSGNL 465
            I+DPKRVKRILANRQSA +S+ RK++++ EL++ V  L+ + +  +  V  L     L N+ +  L
Sbjct:  184 ILDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSAL 249
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: BZP61_ARATH (Basic leucine zipper 61 OS=Arabidopsis thaliana OX=3702 GN=BZIP61 PE=1 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 7.695e-7
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 1 
Query:  268 IVDPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQVYVFLFNLSS 456
            I DPKRVKRILANRQSA +S+ RK++++ EL++ V  L+ + +  +  V  L     L N+ +
Sbjct:  200 IHDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNVDN 262
[Close]
BLAST of rna-KK1_027606 vs. DB:Swiss
Match: BZP19_ORYSJ (Basic leucine zipper 19 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP19 PE=2 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 9.052e-7
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 1 
Query:  274 DPKRVKRILANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQVYVFLFNLSSGNL 465
            DPKRVKRILANRQSA +S+ RK++++ EL++ V  L+++ +  +  V  L     L  + + +L
Sbjct:  140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVGNSHL 203
The following BLAST results are available for this feature:
BLAST of rna-KK1_027606 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
RF2B_ORYSJ2.842e-1859.70Transcription factor RF2b OS=Oryza sativa subsp. j... [more]
BZP18_ARATH2.410e-1748.89bZIP transcription factor 18 OS=Arabidopsis thalia... [more]
RF2A_ORYSJ4.681e-1753.01Transcription factor RF2a OS=Oryza sativa subsp. j... [more]
VIP1_ARATH5.795e-1753.25Transcription factor VIP1 OS=Arabidopsis thaliana ... [more]
POF21_ARATH1.123e-1555.22Probable transcription factor PosF21 OS=Arabidopsi... [more]
BZP02_ORYSJ1.918e-940.45Basic leucine zipper 2 OS=Oryza sativa subsp. japo... [more]
BZP34_ARATH2.083e-742.42Basic leucine zipper 34 OS=Arabidopsis thaliana OX... [more]
BZP61_ARATH7.695e-742.86Basic leucine zipper 61 OS=Arabidopsis thaliana OX... [more]
BZP19_ORYSJ9.052e-740.63Basic leucine zipper 19 OS=Oryza sativa subsp. jap... [more]
back to top
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..130
NoneNo IPR availableGENE3D1.20.5.170coord: 94..145
e-value: 3.3E-8
score: 35.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableCDDcd14703bZIP_plant_RF2coord: 95..142
e-value: 4.29752E-14
score: 61.0516
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 94..145
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 90..154
e-value: 3.7E-5
score: 33.1
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 92..128
e-value: 2.5E-6
score: 27.4

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_027606_Cc_Asha_v1.0 ID=rna-KK1_027606_Cc_Asha_v1.0; Name=rna-KK1_027606; organism=Cajanus cajan; type=mRNA; length=507bp
ATGCTTGAGTCGCTGCCGCCGCCGCCAAGCGCCGCCGTGGTGGGCGTGGA
TTCGGTGTCGTCGGAGCATTCGGTGGGGCCCACTGCGGGAGTGGACCGTG
GGAAGTCGGTGGTGAGCGAGGAGATGGGCGGCGGCGGAGGGAAGAAGGCG
GAGCGGCGGCGGCGGAACAAGATTCCCGTGGGCGCGTCCTCGAGGGCGTC
GTTTAAGGGAGAGACGGTTTCTTTGGTGAAGAAGGCCCTCGCCCCTGAGC
AGCTTGCTGAACTTGCTATCGTTGATCCTAAGAGGGTTAAGAGGATTCTT
GCCAATAGGCAATCTGCTGCTAAATCCAAGGAGAGGAAAATGCGTCATAT
GCGTGAGTTACAAAAGAAGGTACAGTTGCTTAAAATTCAAACAACCGAGA
AGGCTACAACTGTTACCATGCTTCAGGTATATGTTTTCCTTTTCAATTTG
TCAAGTGGCAATTTGAGTGTTAACGAGTATTTTAATTTCTCTATAAATAT
CATCTGA
back to top

protein sequence of rna-KK1_027606_Cc_Asha_v1.0

>rna-KK1_027606_Cc_Asha_v1.0 ID=rna-KK1_027606_Cc_Asha_v1.0; Name=rna-KK1_027606_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=168bp
MLESLPPPPSAAVVGVDSVSSEHSVGPTAGVDRGKSVVSEEMGGGGGKKA
ERRRRNKIPVGASSRASFKGETVSLVKKALAPEQLAELAIVDPKRVKRIL
ANRQSAAKSKERKMRHMRELQKKVQLLKIQTTEKATTVTMLQVYVFLFNL
SSGNLSVNEYFNFSINII
back to top

mRNA from alignment at Scaffold000350-KQ483452.1:54636..56057-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_027606_Cc_Asha_v1.0 ID=rna-KK1_027606_Cc_Asha_v1.0; Name=rna-KK1_027606; organism=Cajanus cajan; type=mRNA; length=1422bp; location=Sequence derived from: Scaffold000350-KQ483452.1:54636..56057- (Cajanus cajan
ATGCTTGAGTCGCTGCCGCCGCCGCCAAGCGCCGCCGTGGTGGGCGTGGA
TTCGGTGTCGTCGGAGCATTCGGTGGGGCCCACTGCGGGAGTGGACCGTG
GGAAGTCGGTGGTGAGCGAGGAGATGGGCGGCGGCGGAGGGAAGAAGGCG
GAGCGGCGGCGGCGGAACAAGATTCCCGTGGGCGCGTCCTCGAGGGCGTC
GTTTAAGGGAGAGACGGTTTCTTTGGTGAAGAAGGCCCTCGCCCCTGAGC
AGCTTGCTGAACTTGCTATCGTTGATCCTAAGAGGGTTAAGAGGTCTACA
TTTTTTCATTTTATTTCTTTTTTAATCAATTATTTTCAAAACCATTAAAA
AATTAAATTATATTTTTATAAATCTTTTGCATAAAATTGTTTAGTAATAT
AATCAAATATTTTTTTAGCAAAAACAATTTTTAAGTAATATTTTGCGAAT
TAAAAATAGAAATATTCTCTAATACTTTTTTTTTTGGGCAGATCTAATAC
TATTTTTATAACATATATTTTTTCTATTATTGATTGAAGTTTATTGAAAA
TCATAAATCATAAATTTTATTAATAAGTGAAATCAAATGAAGAACAAAAC
TCACTTAAAATTATAATTTTTAATGAATTTCGGTTAACAATAAAAAATAA
TTATTCTATACATATAACAACTTAGTCTTCATTGATTATTGTAAATAAAT
AATTAAGAAAAAATATATGATTATATATTATTATAATGGATCTGATTTTA
GTGAAGAGTTTTTTTTTTTTTTTTACAGCAAAGAATTATTTTCTTTTAGA
AAAATAGCATAGGATTCATACTCGTGTTCATCAACTTCTAGAGAGATAAA
AGAAAAAAGGAAGTGATAAATTTAACACAAAATATGAGACAAAAAAGAAA
TATAAAGAGATATTACATATTAGAGTCATGTAGCGTTGTTCATTTTTCTG
TTTTCCTTTTTGAAAGAAAAGTGAGATCAATTACAATTTTTTTTAAAACT
CTTAAAAATAAAAAGTAATAATAAACAAAAGAGTTTTCTTTTTCAAAAGA
AAAGAAAGTACAAGAGTTACGGTACTACTTTTTGAATCAGTCTCAATCAG
TCTTTTTGCTCACGTGTGCATATGCATGGCCAAAAAAAAATAATCGTTGT
CTGCATGGCGTAACACGTGTTTGAGATTGATGATATTAGTTCAATTGTTG
TTTCGTAGGATTCTTGCCAATAGGCAATCTGCTGCTAAATCCAAGGAGAG
GAAAATGCGTCATATGCGTGAGTTACAAAAGAAGGTACAGTTGCTTAAAA
TTCAAACAACCGAGAAGGCTACAACTGTTACCATGCTTCAGGTATATGTT
TTCCTTTTCAATTTGTCAAGTGGCAATTTGAGTGTTAACGAGTATTTTAA
TTTCTCTATAAATATCATCTGA
back to top

Coding sequence (CDS) from alignment at Scaffold000350-KQ483452.1:54636..56057-

>rna-KK1_027606_Cc_Asha_v1.0 ID=rna-KK1_027606_Cc_Asha_v1.0; Name=rna-KK1_027606; organism=Cajanus cajan; type=CDS; length=1014bp; location=Sequence derived from: Scaffold000350-KQ483452.1:54636..56057- (Cajanus cajan
ATGCTTGAGTCGCTGCCGCCGCCGCCAAGCGCCGCCGTGGTGGGCGTGGA
TTCGGTGTCGTCGGAGCATTCGGTGGGGCCCACTGCGGGAGTGGACCGTG
GGAAGTCGGTGGTGAGCGAGGAGATGGGCGGCGGCGGAGGGAAGAAGGCG
GAGCGGCGGCGGCGGAACAAGATTCCCGTGGGCGCGTCCTCGAGGGCGTC
GTTTAAGGGAGAGACGGTTTCTTTGGTGAAGAAGGCCCTCGCCCCTGAGC
AGCTTGCTGAACTTGCTATCGTTGATCCTAAGAGGGTTAAGAGATGCTTG
AGTCGCTGCCGCCGCCGCCAAGCGCCGCCGTGGTGGGCGTGGATTCGGTG
TCGTCGGAGCATTCGGTGGGGCCCACTGCGGGAGTGGACCGTGGGAAGTC
GGTGGTGAGCGAGGAGATGGGCGGCGGCGGAGGGAAGAAGGCGGAGCGGC
GGCGGCGGAACAAGATTCCCGTGGGCGCGTCCTCGAGGGCGTCGTTTAAG
GGAGAGACGGTTTCTTTGGTGAAGAAGGCCCTCGCCCCTGAGCAGCTTGC
TGAACTTGCTATCGTTGATCCTAAGAGGGTTAAGAGGATTCTTGCCAATA
GGCAATCTGCTGCTAAATCCAAGGAGAGGAAAATGCGTCATATGCGTGAG
TTACAAAAGAAGGTACAGTTGCTTAAAATTCAAACAACCGAGAAGGCTAC
AACTGTTACCATGCTTCAGGTATATGTTTTCCTTTTCAATTTGTCAAGTG
GCAATTTGAGTGTTAACGAGTATTTTAATTTCTCTATAAATATCATCTGA
GATTCTTGCCAATAGGCAATCTGCTGCTAAATCCAAGGAGAGGAAAATGC
GTCATATGCGTGAGTTACAAAAGAAGGTACAGTTGCTTAAAATTCAAACA
ACCGAGAAGGCTACAACTGTTACCATGCTTCAGGTATATGTTTTCCTTTT
CAATTTGTCAAGTGGCAATTTGAGTGTTAACGAGTATTTTAATTTCTCTA
TAAATATCATCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity