rna-KK1_036685
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_036685 vs. DB:Swiss
Match: HGNAT_MOUSE (Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus OX=10090 GN=Hgsnat PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 9.698e-35 Identity = 148/477 (31.03%), Postives = 228/477 (47.80%), Query Frame = 1 Query: 73 SIEHDRDTRSNQEGESVQQIVEQE-QPLVKQKT-RRVATLDAFRGLTIVLMVLVDDAGGAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRI-----TKVKDAVKKIILRTLKLLFWG-ILLQGGYSHAPDDLSYGVDMRFIRWCGILQRIALVYCVVALIETFTTKLRPS--TLKPGHLSIFS-AYRW-QWLGGFVAFVIYMVTTFSLYVPDWSFVDYNSDKPKRYTVQCGMRGHLG--PACN--AVGYVDRQVWGVNHLYSDPVWTRLKACTFSSPAEGPLRKDAPFWCRAPFEPEXXXXXXXXXXXXXXXXHYGHVLIHFKGHSE----RLKQWLS-MGFVLLILGIILHFTNAIPINKQLYSFSYVCFTAGAAGIVFSVFYLLIDVWGL--RTPFLFLEWIGMNAMLVFVMAAQGIFAAFVNGWYYKDPDNSLQVYWIQNHVFINVWHSERLGTLLYVIFAEITFWGV 1434
S E DR S S + + QP ++ + R+ +D FRGL +VLMV V+ GG Y HS WNG T+AD V P+F+FI+G +I L++ I +K+K + KI+ R+ L+ G I++ Y P + +R G+LQR+ + Y VVA++E F K P TL+ S+ W QWL I++ TF L VP P Y G+ G LG P C A GY+DR + G NHLY P T L + ++PEG+L +I++I+ +G+ G +L+++K ++ R W +G + ++L + IPINK L+S SYV + A + + Y ++DV GL TPF + GMN++LV+V + + F W D + S + + IQN V +W + YV++ + FW +
Sbjct: 225 SRETDRLINSELGSPSRADPLSADYQPETRRSSANRLRCVDTFRGLALVLMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQRGCSKLK-LLGKIVWRSFLLICIGVIIVNPNYCLGP------LSWDKVRIPGVLQRLGVTYFVVAVLEFFFWKPVPDSCTLESSCFSLRDITSSWPQWLTILTLESIWLALTFFLPVPGC---------PTGYLGPGGI-GDLGKYPHCTGGAAGYIDRLLLGDNHLYQHPSSTVL------------------YHTEVAYDPEGVLGTINSIVMAFLGVQAGKILVYYKDQTKAILTRFAAWCCILGLISIVLTKVSANEGFIPINKNLWSISYVTTLSCFAFFILLILYPVVDVKGLWTGTPFFY---PGMNSILVYV-GHEVLENYFPFQWKLAD-EQSHKEHLIQNIVATALWV-----LIAYVLYKKKLFWKI 656
BLAST of rna-KK1_036685 vs. DB:Swiss
Match: HGNAT_HUMAN (Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens OX=9606 GN=HGSNAT PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.437e-29 Identity = 131/442 (29.64%), Postives = 210/442 (47.51%), Query Frame = 1 Query: 172 RVATLDAFRGLTIVLMVLVDDAGGAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRITKVKDA----VKKIILRTLKLLFWGILL-QGGYSHAPDDLSYGVDMRFIRWCGILQRIALVYCVVALIETFTTKLRP----STLKPGHLSIFSAYRWQWLGGFVAFVIYMVTTFSLYVPDWSFVDYNSDKPKRYTVQCGMRGHLG--PACN--AVGYVDRQVWGVNHLYSDPVWTRLKACTFSSPAEGPLRKDAPFWCRAPFEPEXXXXXXXXXXXXXXXXHYGHVLIHFKGHSE----RLKQWLS-MGFVLLILGIILHFTNAIPINKQLYSFSYVCFTAGAAGIVFSVFYLLIDVWGL--RTPFLFLEWIGMNAMLVFVMAAQGIFAA-FVNGWYYKDPDNSLQVYWIQNHVFINVWHSERLGTLLYVIFAEITFWGV 1434
R+ ++D FRG+ ++LMV V+ GG Y H+ WNG T+AD V P+F+FI+G +I L++ I + + + KI R+ L+ GI++ Y P LS+ +R G+LQR+ + Y VVA++E K P S L ++ QWL V +++ TF L VP P Y G+ G G P C A GY+DR + G +HLY P L + ++PEG+L +I++I+ +G+ G +L+++K ++ R W +G + + L + IP+NK L+S SYV + A + V Y ++DV GL TPF + GMN++LV+V +F F W KD + S + + QN V +W + Y+++ + FW +
Sbjct: 267 RLRSVDTFRGIALILMVFVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQRGCSKFRLLGKIAWRSFLLICIGIIIVNPNYCLGP--LSWDK----VRIPGVLQRLGVTYFVVAVLELLFAKPVPEHCASERSCLSLRDITSSWPQWLLILVLEGLWLGLTFLLPVPGC---------PTGYLGPGGI-GDFGKYPNCTGGAAGYIDRLLLGDDHLYQHPSSAVL------------------YHTEVAYDPEGILGTINSIVMAFLGVQAGKILLYYKARTKDILIRFTAWCCILGLISVALTKVSENEGFIPVNKNLWSLSYVTTLSSFAFFILLVLYPVVDVKGLWTGTPFFY---PGMNSILVYV--GHEVFENYFPFQWKLKD-NQSHKEHLTQNIVATALWV-----LIAYILYRKKIFWKI 663 The following BLAST results are available for this feature:
BLAST of rna-KK1_036685 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_036685_Cc_Asha_v1.0 ID=rna-KK1_036685_Cc_Asha_v1.0; Name=rna-KK1_036685; organism=Cajanus cajan; type=mRNA; length=1479bpback to top protein sequence of rna-KK1_036685_Cc_Asha_v1.0 >rna-KK1_036685_Cc_Asha_v1.0 ID=rna-KK1_036685_Cc_Asha_v1.0; Name=rna-KK1_036685_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=492bpback to top mRNA from alignment at Scaffold128880-KQ483745.1:52654..56222- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_036685_Cc_Asha_v1.0 ID=rna-KK1_036685_Cc_Asha_v1.0; Name=rna-KK1_036685; organism=Cajanus cajan; type=mRNA; length=3569bp; location=Sequence derived from: Scaffold128880-KQ483745.1:52654..56222- (Cajanus cajanback to top Coding sequence (CDS) from alignment at Scaffold128880-KQ483745.1:52654..56222- >rna-KK1_036685_Cc_Asha_v1.0 ID=rna-KK1_036685_Cc_Asha_v1.0; Name=rna-KK1_036685; organism=Cajanus cajan; type=CDS; length=2958bp; location=Sequence derived from: Scaffold128880-KQ483745.1:52654..56222- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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