rna-KK1_036686
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 8.884e-69 Identity = 135/421 (32.07%), Postives = 216/421 (51.31%), Query Frame = 1 Query: 19 GKERAKCNGCGKT--YVVGGKAYGTSHLNRHIP-------KCEKRKYEDMSQMILNMQGKLKSRKIDQMIFR---------------ELYCHLMIRHGFPFNFIESPVFKALITYLNPDENTFSKNTFKVDMWRIFIRDKARLKSELATIPNKICLTSDLWKSCNTEGFISLTTHYVDLNWKSNSKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKKNFSITLDN-VSANDXXXXXXXXXXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSALCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVDENYKYCPSDEEWERATKICKFLQPFYEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKMHK 1206
G RA C C +T Y G K GTSHL RHI K ++ K + + G+ + + +R ++I H +P + ++ P F I L P T + +++ ++ ++K L +T+P +I LT LW + T G++SL ++D WK + ++LNF + PH+ LS+ I L DW ++ K F+ITLDN S++D+ L+ L + L+ G+ F VRC AH+LN + Q+ + + G + IR SIK+++ S SR KF + + +I S+ LCLDV T+WN+T+LML +AL Y++ F +L D+NY PS E+W++ C +L+ Y+ I + PTSNL+F + WK+Q L + ED V + MH+
Sbjct: 83 GATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPIIKNQEHKLALTPAVGTDNDGEGTVERPSKRRYRYTGYANAAFDQDRSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEGEVYAVYQKEKENLMQAFSTMPGRISLTIGLWTTSQTLGYVSLAGQFIDSEWKIHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSREEKFAEIALQL-EIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLELSNATGHEDPVFSSIAKDMHE 502 HSP 2 Score: 74.7146 bits (182), Expect = 1.090e-12 Identity = 46/114 (40.35%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 1159 TGEDKVVRDMELKMHKLQVA-NKSGRTQLDIYLDEPTLDLDFTEHMDILQWWKNNSQRFPDLSLMARDFLSIPITTVAS-ESTFNIGSC--ILNKYRNRLLPENVEAIICVSSW 1488
TG+ V DM L ++A ++ +++L+ YLDE + DIL WWK N+ +FP LS MARD L+IP++ V+S S F+ G+ +L+ YR+ L PE VEA++C W
Sbjct: 594 TGDGLVDFDMYLS----EIATSQPTKSELEQYLDESLTPR--IQEFDILNWWKLNTLKFPTLSRMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSLRPEIVEALVCAKDW 701
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.515e-67 Identity = 134/422 (31.75%), Postives = 213/422 (50.47%), Query Frame = 1 Query: 19 GKERAKCNGCGKT--YVVGGKAYGTSHLNRHI--PKCEKRKYEDMS-----QMILNMQGKLKSRKIDQMIFREL---------------YCHLMIRHGFPFNFIESPVFKALITYLNPDENTFSKNTFKVDMWRIFIRDKARLKSELATIPNKICLTSDLWKSCNTEGFISLTTHYVDLNWKSNSKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKKNFSITLDN-VSANDXXXXXXXX-XXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSALCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVDENYKYCPSDEEWERATKICKFLQPFYEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKMHK 1206
G RA CN C +T Y G K GTSHL RHI C K EDM + N G+ + ++ + +R ++I H +P + +E F A I L P +T + + ++ +++ L +T+P +I LT LW + T G+ISL ++D W+ + +++NF + PH+ LS+ I L DW ++ K F+ITLDN S++D+ + + ++ G+ F VRC AH+LN + Q+ + + + IR SIK+++ S KF + + +I S+ LCLDV T+WN+T+LML +AL YQ+VF SL D +Y PS E+W++ C +L Y+ I PTSN++F + WK+Q L ++ ED + R MH+
Sbjct: 123 GVSRASCNLCKQTFAYSCGSKISGTSHLKRHITLASCPMLKNEDMKLSLPLATVTNNDGEGCAERVAKRHYRSTGYANAMFDQDRTCSNLAKMIILHDYPLHIVEQRGFTAFIGSLQPRFRVIDVDTIEGQVHSVYQKERENLMHVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPHSENSLSEAISTSLSDWNMKDKLFTITLDNDPSSHDIYSANMINYLSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVHSVIYHIRESIKFIKASSVHEDKFAEIALQL-EIPSAKTLCLDVTTQWNTTYLMLLAALDYQQVFASLETCDGDYNEAPSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHEAWKLQSELSNAIAHEDPIFRSTAKIMHE 543 HSP 2 Score: 73.1738 bits (178), Expect = 2.993e-12 Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 1234 TQLDIYLDEPTLDLDFTEHMDILQWWKNNSQRFPDLSLMARDFLSIPITTVASESTF----NIGSCILNKYRNRLLPENVEAIICVSSWKYGFNPGNSFNP 1524
++L+ YL+E + + +IL+WWK N+ +FP LS MARD L+IP++ V+S S+ GS +L+ YR+ L PE VEA+ C W + P + P
Sbjct: 646 SELEQYLEEALMPR--IQDFEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATATGSQMLDDYRSSLRPETVEALFCAKDW-LQYPPATTEAP 743
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: RSLE1_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 1.711e-67 Identity = 137/421 (32.54%), Postives = 214/421 (50.83%), Query Frame = 1 Query: 19 GKERAKCNGCGKT--YVVGGKAYGTSHLNRHIP--KCEKRKYEDMSQMILNMQG-------------KLKSR-------KIDQMIFRELYCHLMIRHGFPFNFIESPVFKALITYLNPDENTFSKNTFKVDMWRIFIRDKARLKSELATIPNKICLTSDLWKSCNTEGFISLTTHYVDLNWKSNSKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKKNFSITLDN-VSANDXXXXXXXXXXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSALCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVDENYKYCPSDEEWERATKICKFLQPFYEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKMHK 1206
G RA C C +T Y G K GTSHL RHI C K K ++ ++ G K + R DQ ++I H +P + ++ P F I L P T + +++ ++ ++K L T+P +I L LW + T G++SL ++D WK + ++LNF + PH+ LS+ I L DW ++ K F+ITLDN S++D+ L+ L + L+ G+ F VRC AH+LN + Q+ + + G + IR SIK+++ S S KF + + +I S+ LCLDV T+WN+T+LML +AL Y++ F +L D+NY PS E+W++ C +L+ Y+ I + PTSNL+F + WK+Q L + ED V + MH+
Sbjct: 83 GATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPKIKNQEHKLLLTPAGGTDNDGEGTVERPSKRRYRYTGYANAAFDQERSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEWEVYAVYQKEKENLMQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSCEEKFAEIALQL-EIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLELSNATGREDPVFSSIAKDMHE 502 HSP 2 Score: 70.4774 bits (171), Expect = 2.122e-11 Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 1159 TGEDKVVRDMELKMHKLQVA-NKSGRTQLDIYLDEPTLDLDFTEHMDILQWWKNNSQRFPDLSLMARDFLSIPITTVAS-ESTFNIGSC--ILNKYRNRLLPENVEAIICVSSW 1488
TG+ V DM L ++A ++ +++L+ YLDE + DIL WWK N+ ++P LS MARD L+IP++ V+S S F+ G+ +L+ YR+ PE VEA++C W
Sbjct: 594 TGDGLVDFDMYLS----EIATSQPTKSELEQYLDESLTPR--IQEFDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSSRPEIVEALVCAKDW 701
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 3.684e-57 Identity = 113/342 (33.04%), Postives = 188/342 (54.97%), Query Frame = 1 Query: 184 KIDQMIFRELYCHLMIRHGFPFNFIESPVFKALITYLNPDENTFSKNTFKVDMWRIFIRDKARLKSELATIPNKICLTSDLWKSCNTEGFISLTTHYVDLNWKSNSKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKKNFSITLDNVSANDXXXXXXXXX-XXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSALCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVDENY--KYCPSDEEWERATKICKFLQPFYEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKM 1200
K D+++ + +I H +PFN +E F + L P S+ T + + +++ +K +L +L + ++ T D+W SC + ++ +T H++D +W +I+ F H+ HTG LS+ + W IEKK F+++LDN SAN+V + + L+CDG FFHVRC H+LNL+ ++GL V+ GT+++I+ + ++ S + + KC + D++ S + DV TRWNST+LMLR AL Y+ L D CP EEW+ A + K L+ F+++T L+SGT Y T+NL++ +I+ L+ E V+R M + M
Sbjct: 222 KYDEVVSLKKLHLAIIMHEYPFNIVEHEYFVEFVKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASE-CDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRYDAICPKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDLIDQWCVHEKFVIRRMAVAM 562 HSP 2 Score: 90.5077 bits (223), Expect = 1.008e-17 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 1198 MHKLQVANKSGRTQLDIYLDEPTLDLDFTEHMDILQWWKNNSQRFPDLSLMARDFLSIPITTVASESTFNIGSCILNKYRNRLLPENVEAIICVSSWKYGFNPGNSFNPILI 1533
+H+L+ ++ +LD Y+ EP L + DIL WW+ +P L+ +ARD L+I ++TVASES F+ G +++ YRNRL E VEA+IC W G ++ P +I
Sbjct: 656 LHELKDYDQVESNELDKYMSEPLLK--HSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWVAASRKGATYFPTMI 765
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: RSLE4_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3) HSP 1 Score: 196.823 bits (499), Expect = 7.202e-54 Identity = 118/403 (29.28%), Postives = 207/403 (51.36%), Query Frame = 1 Query: 16 DGKERAKCNGCGKT--YVVGGKAYGTSHLNRHIPK-CEKRKYEDMSQMILNMQGKLKSRKIDQMIFRELYCHLMIRHGFPFNFIESPVFKALITYLNPDENTFSKNTFKVDMWRIFIRDKARLKSELATIPNKICLTSDLWKSCNTEGFISLTTHYVDLNWKSNSKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKKNFSITLD-NVSANDXXXXXXXXXXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSALCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVDENYKYCPSDEEWERATKICKFLQPFYEITTLISGT--SYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKMHK 1206
DG +RA C C ++ Y G K GTSHL RHI + C K S+ ++ DQ ++I + +P + ++ P F + + + P+ T + +++ I++++K L+ LA IP +I LT + + +ISL ++D W+ + ++L P P + +S+ I L DW ++ K F+ITL+ + S++D+ L+ L L+ G+ F VRC A++LN + L + + IR SIK+++ ++ KF + + I S+++LCLDV + WN+T+LML +AL Y++VF L +NY PS E+W++ C FL+ Y T I ++ T+N++F W +Q L + D V+R + + +H+
Sbjct: 70 DGCKRASCIHCNQSLAYSSGSKNSGTSHLTRHIAEWCRVLKDRQKSRRYTTYNSSNENASFDQERSCLRLAKMIILNDYPLHIVQQPAFLSFVDSVQPNFKMVDIGTIETEVYAIYLKEKDHLQQALANIPGRISLTVGSLTTNQSIRYISLAAQFIDSEWRLHRRVLKVMMAPWPQSENAVSRAIIKCLSDWNMQDKLFTITLEHDCSSHDIYSANLRNHLSGDNILMLKGQTFAVRCYANILNAVAHGVLASVHNVIYLIRESIKFIKADDAHENKFAEIAVELK-ITSNNSLCLDVTSEWNTTYLMLLAALDYRQVFTLLESYYDNYGTAPSTEDWKKVEAACGFLKLLYAFTLNIMSAEGNHQTANMFFHDAWVLQLELQNGMAHGDDVIRGIVIGIHE 471 HSP 2 Score: 69.3218 bits (168), Expect = 4.983e-11 Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 1282 TEHMDILQWWKNNSQRFPDLSLMARDFLSIPITTVASESTFNI---GSCILNKYRNRLLPENVEAIICVSSW 1488
T D+L+WW++N+ ++P LS MARD L+IP++TV S+ + GS L+ YR+ L PE VEA++C W
Sbjct: 608 TPDFDVLKWWQDNTLKYPTLSRMARDVLAIPMSTVGVGSSVFLPDNGSRSLDDYRSSLRPELVEALLCAKDW 679
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: DSLE_ARATH (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.934e-53 Identity = 118/420 (28.10%), Postives = 199/420 (47.38%), Query Frame = 1 Query: 28 RAKCNGCGKT--YVVGGKAYGTSHLNRHI-------------------------PKCEKRKYEDMSQMILNMQGKLKSRKIDQMIFRELYCHLMIRHGFPFNFIESPVFKALITYLNPDENTFSKNTFKVDMWRIFIRDKARLKSELATIPNKICLTSDLWKSCNTEGFISLTTHYVDLNWKSNSKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKKNFSITLDNVSANDXXXXXXXXXXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSALCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVDENYKYCPSDEEWERATKICKFLQPFYEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKMHK 1206
RA C GC ++ Y G K GTSHL RHI PK + + SQ + K Q I + ++I H +P + ++ P F + + + P + S N + D ++ +K + L IP + CLT D W S T G++ +T HY+D +WK K+LN P LS + + + +WG+E K F++T ++ ++N ++ + + G++ DG+ C A + ++ L+ + IR S+K+++ SES +F + LK+ + S L LD T+WN+T++ML +A + + VF L D +YK PS E+W +C FL+P +E + + T P++ +F +VWK Q L ++ GED V + M +
Sbjct: 85 RAFCKGCNQSFAYSNGNKVAGTSHLKRHIFKGTCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRSQNNASPYVAFNQDKCRQEIAK-----MIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHPASNSAVENIRPQLCIKNPGIL-DGQLVIGNCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTE-LKEQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQE 497 HSP 2 Score: 80.4925 bits (197), Expect = 1.535e-14 Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 1207 LQVANKSGRTQLDIYLDEPTLDLDFTEHMDILQWWKNNSQRFPDLSLMARDFLSIPITTVASESTFNIGSCILNKYRNRLLPENVEAIICVSSW 1488
++ ++ +++LD YLDE TL L + D+L WWK N ++P LS MARD LSIP++ A + F++ +++Y+ L PE VEA+IC W
Sbjct: 582 METTGQNLKSELDQYLDE-TL-LPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREW 673
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.667e-49 Identity = 125/434 (28.80%), Postives = 207/434 (47.70%), Query Frame = 1 Query: 16 DGKERAK----CN--GCGKTYVVGGKAYGTSHLNRHIPKCEKRKYEDMSQMILNMQGK----LKSRKIDQMIFRELYCHLMIRHGFPFNFIESPVFKALITYLNPDENTFSKNTFKVDMWRIFIRDKARLKSELATIPNKICLTSDLWKSCNTEGFISLTTHYVDLNWKSNSKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKKNFSITLDNVSANDXXXX-XXXXXXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSALCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVD------------ENYKYC----------------PSDEEWERATKICKFLQPFYEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKM 1200
DGK+ + CN C Y G +GTS H+ + GK ++ K D+++ + +I H +PFN +E F + L P S+ T + + +++ +K +L +L + ++ T D+W SC + ++ +T H++D +W +I+ F H+ HTG LS+ + W IEKK F+++LDN SAN+V ++ L+CDG FFHVRC H+LNL+ ++GL V+ GT+++I+ + ++ S + + KC + D++ S + DV TRWNST+LMLR AL Y+ L D +YK+ P W C L+ F+++T L+SGT Y T+NL++ +I+ L+ E V+R M + M
Sbjct: 102 DGKKYVQVWGHCNFPNCKAKYRAEGH-HGTSGFRNHLRTSHSLVKGQLCLKSEKDHGKDINLIEPYKYDEVVSLKKLHLAIIMHEYPFNIVEHEYFVEFVKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASE-CDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRYVCLNCCTCHHYKFSINQMSIIVGTMQFVLKPRSGRWHLTLFKC--LKKFFDLTELLSGTQYSTANLFYKGFCEIKDLIDQWCCHEKFVIRRMAVAM 531 HSP 2 Score: 84.7297 bits (208), Expect = 7.828e-16 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 1198 MHKLQVANKSGRTQLDIYLDEPTLDLDFTEHMDILQWWKNNSQRFPDLSLMARDFLSIPITTVASESTFNIGSCILNKYRNRLLPENVEAIICVSSWKYGFNPGN 1512
+H+L+ ++ +LD Y+ EP L + DIL WW+ +P L+ +ARD L+I ++TVASES F+ G +++ YRNRL E VEA+IC W G
Sbjct: 625 LHELKDYDQVESNELDKYMSEPLLK--HSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWVAASRKGE 727
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: ZBED4_HUMAN (Zinc finger BED domain-containing protein 4 OS=Homo sapiens OX=9606 GN=ZBED4 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 4.357e-12 Identity = 75/340 (22.06%), Postives = 153/340 (45.00%), Query Frame = 1 Query: 244 PFNFIESPVFKALITYLNPDENTFSKNTF-KVDMWRIFIRDKARLKSELATIPNKIC-LTSDLWKSCNTEGFISLTTHYVDLNWKSN--------SKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKK-NFSITL-DNVSANDXXXXXXXXXXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSA-----LCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVDENYKYCPSDEEWERATKICKFLQPF----YEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKM 1200
P++F+++ F L+ YL P + + + F + + ++ K + S L + + TS +W S T +++LT H+V + S +L+ + ++G + K++ + + W IT+ DN S + +GE V+C +H +NLIV E +K + ++ + R R+ + K +K +++ A L DVP++W+++F ML ++ +R + V+ N++ S ++WE +C+ L+PF E++T +S S ++ L K++ +L G D ++R ++ M
Sbjct: 672 PYSFVDNVGFNRLLEYLKPQYSLPAPSYFSRTAIPGMYDNVKQIIMSHLKEAESGVIHFTSGIWMSNQTREYLTLTAHWVSFESPARPRCDDHHCSALLDVSQVDCDYSGNSIQKQLECWWEAWVTSTGLQVGITVTDNASIGKT---------------LNEGEHSSVQCFSHTVNLIVSEAIK----SQRMVQNLLSLARKICERVHRSPKAKEKLAELQREYALPQHHLIQDVPSKWSTSFHMLERLIEQKRAINEMS-VECNFRELISCDQWEVMQSVCRALKPFEAASREMSTQMSTLSQVIPMVHILN-RKVE-MLFEETMGIDTMLRSLKEAM 989
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: ZBED1_HUMAN (Zinc finger BED domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ZBED1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.508e-11 Identity = 83/389 (21.34%), Postives = 156/389 (40.10%), Query Frame = 1 Query: 241 FPFNFIESPVFKALITYLNPDENTFSKNTFKVD-MWRIFIRDKARLKSELATIPNKICLTSDLWKSCN-TEGFISLTTHYVDLNWKS----NSKILNFHHMPPPHTGFELSKKIGDFLQDWGIEKKNFSITL----DNVSANDXXXXXXXXXXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKV--LDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDINSSSALCLDVPTR---WNSTFLMLRSALKYQRVFGSLHLVDEN-YKYCPSDEEWERATKICKFLQPFYEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKMHKLQVANKSGRTQLDIYLDEPTLDLDFTEHMDILQWWKNNSQRFPDLSLMARD 1359
+P + ++ P FK L+ +P S+ + + + + ELA +++D+W+S N +++L H++ L + S+ L +P +T +++ + + +WGI K F T D V A +L H+ C H N +Q+ ++ L L + R ++Y + S M + K+ + A C+ V R W ST ML+ + Q V + + D N + EW + + LQPF ++ ++S + YPT ++ K ++ + T K EL M K +A + +T Y + P +D+ +++ + +R P LS R
Sbjct: 139 YPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAVREVILKELAEA-TWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLKTFEVPEENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACSLLDVA-----------------VHMPCLGHTFNAGIQQAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQ-----QNVAHCMLVSNRVSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTISMV-----KPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKT----YQETPEIDM----FLNVATFLDPRYKRLPFLSAFERQ 491
BLAST of rna-KK1_036686 vs. DB:Swiss
Match: ZBED4_MOUSE (Zinc finger BED domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zbed4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.382e-10 Identity = 91/441 (20.63%), Postives = 185/441 (41.95%), Query Frame = 1 Query: 37 CNGCGKTYVVGGKA--YGTSHLNRHIPKCEKRKYE-DMSQMILNMQGKLK--------------------------SRKIDQMIFRELYCHLMIRHGFPFNFIESPVFKALITYLNPDENTFSKNTF-KVDMWRIFIRDKARLKSELATIPNKIC-LTSDLWKSCNTEGFISLTTHYVDLNWKSN--------SKILNFHHMPPPHTGFELSKKIGDFLQDW----GIEKKNFSITL-DNVSANDXXXXXXXXXXXXXXGLICDGEFFHVRCCAHVLNLIVQEGLKVLDGTLDQIRTSIKYLRGSESRMIKFKKCLKKFSDIN-----SSSALCLDVPTRWNSTFLMLRSALKYQRVFGSLHLVDENYKYCPSDEEWERATKICKFLQPF----YEITTLISGTSYPTSNLYFLQVWKIQCLLMGSVTGEDKVVRDMELKM 1200
C CG+T G K GTS L RH+ + + D+S+ L+ ++ ++KI +I + L P++ +++ F L+ YL P + S + F + + ++ K + S L + + TS +W S T +++LT H+V S +L+ + ++G + K++ + + W G++ IT+ DN S ++ +GE V+C +H +NLIV E +K + ++ + R R+ + + +K +++ L DVP++W+++F ML ++ +R + ++ N++ S ++WE +C L+PF E++ +S S ++ L K++ +L G G D +++ ++ M
Sbjct: 578 CLHCGRTISRGKKPTNLGTSCLLRHLQRFHGHVLKNDVSEATLSRSPGIRRPLGIELSGPSSFRDSTEKFYDSHPVAKKITSLIAEMIALDLQ-----PYSLVDNVGFNRLLEYLKPQYSLPSPSYFSRTAIPGMYDNVKQIIMSHLKEAESGVVHFTSGIWMSSQTREYLTLTAHWVTFASAVRPHCEDHHCSALLDVSQIDCDYSGNSIQKQLECWWEAWVTSIGLQ---IGITVTDNPSIGK---------------MLSEGEHSSVQCFSHTVNLIVSEAIK----SQRMVQNLLSIARKLCERVHRSPRAREKLAELQKEYELPQHQLIQDVPSKWSTSFHMLERLIEQKRAVNEVS-IECNFRELISCDQWEVMQSVCHVLRPFDAASREMSAHMSTLSQVIPMIHILS-RKVE-MLFGETMGIDTMLKSLKEAM 988 The following BLAST results are available for this feature:
BLAST of rna-KK1_036686 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_036686_Cc_Asha_v1.0 ID=rna-KK1_036686_Cc_Asha_v1.0; Name=rna-KK1_036686; organism=Cajanus cajan; type=mRNA; length=1614bpback to top protein sequence of rna-KK1_036686_Cc_Asha_v1.0 >rna-KK1_036686_Cc_Asha_v1.0 ID=rna-KK1_036686_Cc_Asha_v1.0; Name=rna-KK1_036686_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=537bpback to top mRNA from alignment at Scaffold128880-KQ483745.1:103004..104997+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_036686_Cc_Asha_v1.0 ID=rna-KK1_036686_Cc_Asha_v1.0; Name=rna-KK1_036686; organism=Cajanus cajan; type=mRNA; length=1994bp; location=Sequence derived from: Scaffold128880-KQ483745.1:103004..104997+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at Scaffold128880-KQ483745.1:103004..104997+ >rna-KK1_036686_Cc_Asha_v1.0 ID=rna-KK1_036686_Cc_Asha_v1.0; Name=rna-KK1_036686; organism=Cajanus cajan; type=CDS; length=3228bp; location=Sequence derived from: Scaffold128880-KQ483745.1:103004..104997+ (Cajanus cajanback to top |