rna-KK1_025158

Transcript Overview
Namerna-KK1_025158
Unique Namerna-KK1_025158_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length1164
ProductF-box/kelch-repeat protein At1g67480 family
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0202Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0205Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR165Pisum sativum Cameor genome v1aPisum sativum
ccpsR166Pisum sativum Cameor genome v1aPisum sativum
ccpsR167Pisum sativum Cameor genome v1aPisum sativum
ccccL001Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvR0260Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0261Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0261Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0262Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccL0369Cicer arietinum ICC 4958 genome v2Cicer arietinum
caiccL0542Cicer arietinum ICC 4958 genome v2Cicer arietinum
caiccL0718Cicer arietinum ICC 4958 genome v2Cicer arietinum
caccL0581Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0767Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0271Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0272Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0386Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0444Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0929Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0054Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0672Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0207Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0208Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0213Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0214Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0222Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0235Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0236Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0245Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvssR0247Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0581Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0775Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0387Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0708Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0624Cicer arietinum
carccL0831Cicer arietinum
ccccaR0274Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0275Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0256Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0257Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr01.2313.5.6211317bVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.001G260600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_20476Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cr_21878.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_11335Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Va03G085180.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_004504395.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan01g103400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_09116Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_04G03216.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun01g246100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_08792.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_014638874.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_01G01578.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.2g111920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004502248.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg53565.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.002G174600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va01G040030.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_16790Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_13719.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr03.3728Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun03g168800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_13028.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Tiffany.R1.2g091920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
jg30413.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat7g077800.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_22028.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cc_v2.0_00097.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_019885Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_025158gene-KK1_025158_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_025158rna-KK1_025158_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_025158_Cc_Asha_v1.0rna-KK1_025158_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_025158_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:545789..546324rna-KK1_025158_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:545789..546324Cajanus cajanexon
rna-KK1_025158_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:545789..546324rna-KK1_025158_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:545789..546324Cajanus cajanexon
rna-KK1_025158_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:547232..547859rna-KK1_025158_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:547232..547859Cajanus cajanexon
rna-KK1_025158_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:547232..547859rna-KK1_025158_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:547232..547859Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_025158_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:545789..546324rna-KK1_025158_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:545789..546324Cajanus cajanCDS
rna-KK1_025158_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:545789..546324rna-KK1_025158_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:545789..546324Cajanus cajanCDS
rna-KK1_025158_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:547232..547859rna-KK1_025158_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:547232..547859Cajanus cajanCDS
rna-KK1_025158_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:547232..547859rna-KK1_025158_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:547232..547859Cajanus cajanCDS


Homology
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 481.871 bits (1239), Expect = 1.140e-169
Identity = 236/380 (62.11%), Postives = 287/380 (75.53%), Query Frame = 1
Query:   22 KKRFSEPNMCFPNLANHDERPLTKSNHYVSEALDDVDDGSSPILPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKEFITVRKLAGMHEEWLYILTAGSEGNGSQWEVMDCLGQNRRSLPLMPGPAKAGFGVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFVDVYNPKKHNWCEMKNGCVMVTAHAVLEKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYKTLLYDPNAAPGSEWQTSDIRPSGLCLCCVTIKA 1161
            KKR     MCF    N D       N      +DD      P++PGLPDDV+K CLALVPR+  P+MG VCK+WR  ++SKEFITVR+LAGM EEWLY+LT  + G  ++WEVMDCLGQ   SLP MPGPAK GF VVV++GKLLV+AG   I+G+   SA+VYQYD+CLNSWSRL+++ VARYDFACAEVNG VY VGG+G DG+SLSSAEVYDP+T  WT IESLRRPRWGCFA  F GKLYVMGGRS FTIGNSK +DVYN +  +W   KNG  MVTAH  + KKLFC++WKN RK+++FN ED +W++V +PL+GSS  GF+FG L GKLLLFS +EE    TLLYDP+A+PG++W+TS+I+ SG C+C VTI A
Sbjct:    9 KKRIVNHGMCFSK-GNLDLGSRLSENF-----MDD------PLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTMNAGGKDNRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVVDGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYVMGGRSNFTIGNSKLLDVYNTQCGSWHGSKNGLTMVTAHVEVGKKLFCIDWKNHRKMSVFNAEDETWEVVALPLSGSSRAGFQFGKLSGKLLLFSSQEETGQCTLLYDPDASPGTQWKTSEIKLSGSCVCSVTITA 376          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: FBK16_ARATH (Putative F-box/kelch-repeat protein At1g27420 OS=Arabidopsis thaliana OX=3702 GN=At1g27420 PE=4 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 1.946e-87
Identity = 148/352 (42.05%), Postives = 210/352 (59.66%), Query Frame = 1
Query:  127 VDDGSSPILPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKEFITVRKLAGMHEEWLYILTAGSEGNGSQWEVMDCLGQNRRSLPLMPGPAKAGFGVVVLNG-KLLVMAGYSSIDG------TTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFVDVYNPKKHNWCEMKN-GCVMVTAHAVLEKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYKTLLYDPNAAPGSEWQTSD-IRPSGLCLCCVTI 1155
            V+  SSPI+PGL DDV++ C++ +PRS+      VC+RWR F+RS+ F  VRKL G  EE+L +L     G    WEV D  G     +P +PGP K GFGV VL+G K++   GY+ ++G      T S SA+VY++D   NSW +L+ MN+ RY+FA AEVNGL+Y + GY TD  SLS+AEVY+P T++W+ +    RP W  FA  F  KLY +G  SR       F+D+Y+PK   W E+ +   V V ++ V+  K++ M+     +L +F+PE+NSW  V VP         R G+ + K+LLFS      ++TL+YD +   GS+W+  D I+PS   L  V I
Sbjct:    3 VESSSSPIIPGLTDDVAELCVSKIPRSSFQITSQVCRRWRSFLRSQHFAAVRKLTGTVEEFLCVLMESECGRDVYWEVFDASGNKLGQIPPVPGPLKRGFGVAVLDGGKIVFFGGYTEVEGSGINSTTVSASADVYEFDPANNSWRKLAGMNIPRYNFAFAEVNGLLYVIRGYSTDTYSLSNAEVYNPKTNQWSLMHCPNRPVWRGFAFAFSSKLYAVGNGSR-------FIDIYDPKTQTWEELNSEQSVSVYSYTVVRNKVYFMDRNMPGRLGVFDPEENSWSSVFVP-PREGGFWVRLGVWNNKVLLFS--RVCGHETLMYDLDKEKGSKWRVCDQIKPSASQLASVLI 344          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.203e-30
Identity = 84/278 (30.22%), Postives = 135/278 (48.56%), Query Frame = 1
Query:  145 PILPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKEFITVRKLAGMHEEWLYILTAGSEGNGSQWEVMDCLGQNRRSLPLMPG--PAKAGFGVVVLNG-KLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTD-GDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFV--DVYNPKKHNWCEMKNGCVM--VTAHAVLEKKLFCMEWKNQRKLAIFNPEDNSW 954
            P+LPGLPDD++  CL  VPR+    +  VCKRW        F + RKL GM EEW+Y+     +G  S W   D + Q  + LP +P       GFG  VL+G  L +  G   + G+      V  Y++  N W R  +M   R+ F C  +N  +Y  GG       +L SAEVYDP+ ++W+ I  +           ++ K ++ G      +G+ + V  + Y+P+ ++W  + +G V         L  +L+ ++ ++  KL +F+   +SW
Sbjct:   77 PLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKRDRDGKIS-WNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKDPLRGSMR---RVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEVYDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLKG------LGSHQLVMSEAYDPEVNSWSPVSDGMVAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSW 344          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.322e-28
Identity = 84/284 (29.58%), Postives = 126/284 (44.37%), Query Frame = 1
Query:  145 PILPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKE-FITVRKLAGMHEEWLYILTAGSEGNGSQWEVMDCLGQNRRSLPLMPGPAKA---GFGVVVL--NGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFVDVYNPKKHNWCEMKNGCV--MVTAHAVLEKKLFCMEWKNQRKLAIFNPEDNSWKMVPVP 972
            P++PGLPDDV+ +CL  VP  +  +   VCKRW     +KE F   RK  G  + WL+++         QW+V+D        +P MP   K    GF  V +   G + V  G  S D    +   V +YD   N W+  + M  AR  FA   ++G++YA GG   D   L  AEV +P    W P+ ++             GKL V  G   +    S    VY+P+   W  M  G          V+  +LF +    + K+ +++P  +SW+ +  P
Sbjct:   52 PLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVVGFSRCTGKIQWKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMPREGTMFVCGGMVS-DSDCPLDL-VLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYELDCAEVLNPLDGNWRPVSNMVAHMASYDTAVLNGKLLVTEG-WLWPFFVSPRGQVYDPRTDQWETMSMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGP 332          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: FBK5_ARATH (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.814e-26
Identity = 69/244 (28.28%), Postives = 116/244 (47.54%), Query Frame = 1
Query:  148 ILPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKEFITVRKLAGMHEEWLYILTAGSEGNGSQWEVMDCLGQNRRSLP----LMPGPAKAGFGVVVLNGKLLVMAGYSSIDGTT------SVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYG-TDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFVDVYNPKKHNWCEMKN 846
            I+PGLPDD++  C+A +       +  V + WR  +R  ++   +   G    WL++LT   E + +QW   D        LP    +  G   +GF  V ++  LLV+ G  +   ++       V+ +V ++D     W  +++M   R  FAC  V+G VY  GG   T    + SAEVYDP  D+W  + ++ RP+  C    + G  +V+  +  F   NS   +V+NP+   W  +++
Sbjct:    8 IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLT---ERSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEVYDPVADRWEELPAMPRPQMDCSGLSYRGCFHVLSDQVGFAEQNSS--EVFNPRDMTWSTVED 246          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: SKI30_ARATH (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.591e-24
Identity = 91/309 (29.45%), Postives = 135/309 (43.69%), Query Frame = 1
Query:  142 SPILPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKEFITVRKLAGMHEEWLYILTAGSEGNGSQWEVMDCLGQNRRSLPLMPGPAK--AGFGVVVLNGKLLVMAGYSSI--------DGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPR-WGCFACGFEGKLYVM-GGRSRFTIGNSKFVDVYNPKKHNWCEMKNGCVMVTAHAVLEKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLL 1032
            S +L G+P+ V+  CLA VP    P +  V + WR  IRS E   VRK     E  L +     E   + W+V         +LPL+P   +  A FG V   G L V+ G S          DGT + + +V+ YD     W+  ++M V R  FAC  + G +   GG+ T   S+S AE+YDP+ D WT I  L +     C      GK++V+  G S   +  S  +  ++ K + W +            V+E  L+ M         +F  E ++WKMV         IG     L  ++L+
Sbjct:    9 SGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCVCAFDPE---NIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGDHDGTFA-TDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEMYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLG-WDVKDYGWPQ--------GPMVVVEDVLYVMS-----HGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLI 299          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: NS1BP_MOUSE (Influenza virus NS1A-binding protein homolog OS=Mus musculus OX=10090 GN=Ivns1abp PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.900e-24
Identity = 68/213 (31.92%), Postives = 101/213 (47.42%), Query Frame = 1
Query:  412 AKAGFGVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFVDVYNPKKHNW--CEMKNGCVMVTAHAVLEKKLFCM----EWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLL 1032
            A++G G   +NGKL+   GY+  +   +V      YD   + WS L+ M   R  F  A + G +Y VGG     D LS  E+YDP+ D WTP+  LR  R     C   GKLY++GG   +     K  DV++P   +W  C   N     +A   L   L+ +     W     +  +NPE+N+W ++  P+  +   G    +LDGKL +
Sbjct:  357 ARSGLGTAEMNGKLIAAGGYNREECLRTVEC----YDPHTDHWSFLAPMRTPRARFQMAVLMGQLYVVGGSNGHSDDLSCGEMYDPNIDDWTPVPELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCDVFDPVTKSWTSCAPLNIRRHQSAVCELGGYLYIIGGAESWNCLNTVERYNPENNTWTLI-APMNVARR-GAGVAVLDGKLFV 563          

HSP 2 Score: 65.4698 bits (158), Expect = 3.272e-10
Identity = 49/185 (26.49%), Postives = 86/185 (46.49%), Query Frame = 1
Query:  427 GVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNS-KFVDVYNPKKHNWCEM-------KNGCVMVTAHAVLEKKLF-CMEWKNQRKLAIFNPEDNSW 954
            GV  LNGKL ++ G          + +V+  D    SW+  + +N+ R+  A  E+ G +Y +GG     + L++ E Y+P+ + WT I  +   R G      +GKL+V GG   F   ++   V++Y+P ++ W  M        N  +    + +     F   E+ N   + ++NP+ N W
Sbjct:  457 GVCALNGKLYIVGGSDPYGQKGLKNCDVF--DPVTKSWTSCAPLNIRRHQSAVCELGGYLYIIGG-AESWNCLNTVERYNPENNTWTLIAPMNVARRGAGVAVLDGKLFVGGG---FDGSHAISCVEMYDPTRNEWKMMGNMTSPRSNAGITTVGNTIYAVGGFDGNEFLN--TVEVYNPQSNEW 633          

HSP 3 Score: 64.6994 bits (156), Expect = 5.625e-10
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  412 AKAGFGVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDS-LSSAEVYDPDTDKWTP 690
            A+ G GV VL+GKL V  G+   DG+ ++S  V  YD   N W  + NM   R +     V   +YAVGG+  DG+  L++ EVY+P +++W+P
Sbjct:  548 ARRGAGVAVLDGKLFVGGGF---DGSHAISC-VEMYDPTRNEWKMMGNMTSPRSNAGITTVGNTIYAVGGF--DGNEFLNTVEVYNPQSNEWSP 635          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: SKIP6_ARATH (F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana OX=3702 GN=SKIP6 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.965e-22
Identity = 85/296 (28.72%), Postives = 136/296 (45.95%), Query Frame = 1
Query:  121 DDVDDGSSP--ILPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKEFITVRKLAGMHEEWLYILTAGSEGNGSQWEVM--DCLGQNRRS-----LPLMPGPAKAGFGVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTD--GDSLSSAEVYDPDTDKWTPIES---LRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFVDVYNPKKHNWCEMKNGCVMVTAHA---VLEKKLFCMEWKNQRKLAIFNPEDNSWK 957
            D+  +  SP  ++P L +DV+  CLA VPR + P +  V K +R    S      R L G  E  LY+       +G+ W  +    L  +  S     +P  P P+  G   VV++ ++ V+ G  SI    S S  V+  D   ++W R+SNM V R   A   ++G +Y +GG   D    S++ AE++D  T  W P+ S     R +W   +   EGK+Y M  R+           VY PK+  W EM    + +       V+E  L+C ++    K+  ++P++  W+
Sbjct:    9 DEPPETKSPAQLIPLLSEDVALSCLARVPRCHYPILSLVSKTFRSLPTSPLLYATRALVGATENILYVAIRIPPESGACWFTLLHRTLSNSTNSKMLVPIPSCPSPSLVGSAYVVVDSEIYVIGG--SIRDVPSSS--VWVLDCRFHTWRRVSNMRVGREFAAAGVIDGKIYVIGGCVVDNWARSINWAEMFDIKTQTWEPVASPGMEVREKWMHASAVMEGKVYAMADRNGV---------VYEPKEKKW-EMPEKRLDLGWRGRACVIENILYCYDYLG--KIRGYDPKERIWR 288          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: FK132_ARATH (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g60570 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.166e-20
Identity = 81/318 (25.47%), Postives = 142/318 (44.65%), Query Frame = 1
Query:  139 SSPILPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKEFITVRKLAGMHEEWLYILTAGSEGNGSQWEVMDCLGQNRRSLPLMPGPA---KAGFGVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFVDVYNPKKHNWCEMKNGCVMVTAHA-------VLEKKLFCMEWKNQRKLAIFNPEDNSWKM---VPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 1053
            S  +LPGL DDV+ +CLA VPRS+ P++  V K++   I S     +RK  G+  E+L  +     G    W +   + +    LP MP       A    + ++ +LLV        G       +++Y      W +   M+  R  FA   + G+    GG   +G+ L+SAE+YD  + +W  + ++  PR  C     +GK YV+GG S   + +  F + ++ +   W +++     V   A       V+  +LF +E+     +  ++   N W++   +P  +  S+  G  F     +LL+F  +  P
Sbjct:   46 SDSVLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGI-VEYLVFMVCDPRG----WLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVF-------GRELFQFAIWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSGRWEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPNV-SVTFGEEFDLETRKWRKIEGMYPNVNRAAQAPPLVVVVNNELFTLEYSTN-MVKKYDKVKNKWEVMGRLPPMVDSSNGWGLAFKPCGDQLLVFCGQRGP 349          
BLAST of rna-KK1_025158 vs. DB:Swiss
Match: NS1BP_XENLA (Influenza virus NS1A-binding protein homolog OS=Xenopus laevis OX=8355 GN=ivns1abp PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.378e-20
Identity = 65/213 (30.52%), Postives = 97/213 (45.54%), Query Frame = 1
Query:  412 AKAGFGVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKFVDVYNPKKHNW--CEMKNGCVMVTAHAVLEKKLFCM----EWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLL 1032
            A++G G   LNGKL+   GY+  +   +V      YD   + W+ ++ M   R  F  A +   +Y VGG     D LS  E YDP ++ WTP+  LR  R     C   G LYV+GG   +     K  DV+NP    W  C   N      A   L  K++ +     W     +  +NP++++W +V  P+  +   G    + DGKLL+
Sbjct:  353 ARSGLGTAELNGKLIAAGGYNREECLRTVEC----YDLETDIWTFIAPMKTPRARFQMAVLMDHLYVVGGSNGHSDDLSCGEKYDPKSNIWTPVPELRSNRCNAGVCALNGNLYVVGGSDPYGQKGLKNCDVFNPITRMWTCCAQLNIRRHQPAVCELGNKIYIIGGAESWNCLNSVECYNPQNDTWTLV-APMNVARR-GSGVAVYDGKLLV 559          

HSP 2 Score: 62.3882 bits (150), Expect = 3.105e-9
Identity = 37/98 (37.76%), Postives = 56/98 (57.14%), Query Frame = 1
Query:  412 AKAGFGVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDS-LSSAEVYDPDTDKWTPIESL 702
            A+ G GV V +GKLLV+ G+   DGT ++   V  Y+   N W  + +M  +R +     V   +YA GG+  DG+  L++ EVY+P TD+W+P   L
Sbjct:  544 ARRGSGVAVYDGKLLVVGGF---DGTHALCC-VESYNPERNEWKMVGSMTSSRSNAGVVAVGNQIYAAGGF--DGNEFLNTVEVYNPQTDEWSPFTQL 635          

HSP 3 Score: 59.3066 bits (142), Expect = 3.150e-8
Identity = 39/141 (27.66%), Postives = 65/141 (46.10%), Query Frame = 1
Query:  415 KAGFGVVVLNGKLLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSRFTIGNSKF--VDVYNPKKHNW 831
            +   GV  LNG L V+ G          + +V+  +     W+  + +N+ R+  A  E+   +Y +GG     + L+S E Y+P  D WT +  +   R G     ++GKL V+GG      G      V+ YNP+++ W
Sbjct:  449 RCNAGVCALNGNLYVVGGSDPYGQKGLKNCDVF--NPITRMWTCCAQLNIRRHQPAVCELGNKIYIIGG-AESWNCLNSVECYNPQNDTWTLVAPMNVARRGSGVAVYDGKLLVVGGFD----GTHALCCVESYNPERNEW 582          
The following BLAST results are available for this feature:
BLAST of rna-KK1_025158 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
FBK28_ARATH1.140e-16962.11F-box/kelch-repeat protein At1g67480 OS=Arabidopsi... [more]
FBK16_ARATH1.946e-8742.05Putative F-box/kelch-repeat protein At1g27420 OS=A... [more]
FBK22_ARATH1.203e-3030.22F-box/kelch-repeat protein At1g55270 OS=Arabidopsi... [more]
FBK17_ARATH8.322e-2829.58F-box/kelch-repeat protein At1g30090 OS=Arabidopsi... [more]
FBK5_ARATH3.814e-2628.28F-box/kelch-repeat protein At1g16250 OS=Arabidopsi... [more]
SKI30_ARATH4.591e-2429.45F-box/kelch-repeat protein SKIP30 OS=Arabidopsis t... [more]
NS1BP_MOUSE5.900e-2431.92Influenza virus NS1A-binding protein homolog OS=Mu... [more]
SKIP6_ARATH6.965e-2228.72F-box/kelch-repeat protein SKIP6 OS=Arabidopsis th... [more]
FK132_ARATH1.166e-2025.47F-box/kelch-repeat protein At5g60570 OS=Arabidopsi... [more]
NS1BP_XENLA1.378e-2030.52Influenza virus NS1A-binding protein homolog OS=Xe... [more]
back to top
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 201..248
e-value: 2.1E-10
score: 50.5
coord: 249..297
e-value: 4.3
score: 6.1
coord: 150..200
e-value: 2.4E-6
score: 37.1
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 189..234
e-value: 1.9E-13
score: 49.7
coord: 140..187
e-value: 5.3E-9
score: 35.5
IPR001810F-box domainSMARTSM00256fbox_2coord: 54..94
e-value: 0.0089
score: 25.2
IPR001810F-box domainPFAMPF00646F-boxcoord: 51..90
e-value: 3.3E-5
score: 23.6
IPR011498Kelch repeat type 2PFAMPF07646Kelch_2coord: 238..281
e-value: 1.8E-5
score: 24.5
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 94..331
e-value: 3.7E-44
score: 152.7
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 101..347
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 48..91

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_025158_Cc_Asha_v1.0 ID=rna-KK1_025158_Cc_Asha_v1.0; Name=rna-KK1_025158; organism=Cajanus cajan; type=mRNA; length=1164bp
ATGCCTGGTTTTGTGGCTGAAAAGAAGAGATTTTCTGAGCCAAATATGTG
TTTTCCCAATTTGGCCAACCATGATGAACGGCCTCTCACAAAAAGCAATC
ATTATGTGAGTGAGGCTCTGGATGATGTTGATGATGGTAGTAGCCCCATC
CTACCTGGGCTGCCTGATGATGTTTCAAAGCACTGCCTTGCACTCGTGCC
TCGTTCTAACTCCCCTGCAATGGGTGGTGTCTGTAAGAGATGGAGGTGCT
TTATTCGAAGCAAGGAATTCATAACTGTGAGAAAATTGGCTGGGATGCAT
GAGGAATGGCTCTATATCTTGACAGCAGGTAGTGAAGGAAATGGGAGCCA
GTGGGAGGTCATGGATTGTCTCGGTCAAAATCGCCGTTCTCTTCCGCTGA
TGCCTGGTCCAGCGAAGGCTGGCTTTGGGGTAGTGGTTCTTAATGGAAAG
CTCCTTGTTATGGCTGGTTATTCATCGATTGATGGAACTACCTCTGTCTC
AGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGCTGGAGCAGATTGT
CAAACATGAATGTGGCACGCTATGACTTTGCTTGTGCTGAAGTCAATGGC
TTGGTTTATGCTGTTGGCGGCTACGGCACAGACGGTGACAGTCTCTCCAG
TGCAGAGGTGTATGACCCTGATACCGACAAATGGACGCCGATAGAGAGCC
TTCGTCGCCCGAGATGGGGTTGCTTTGCCTGTGGATTTGAGGGGAAGCTG
TATGTGATGGGGGGAAGGTCAAGATTTACAATTGGAAACTCCAAGTTTGT
TGATGTGTACAACCCCAAGAAGCACAACTGGTGTGAGATGAAAAACGGGT
GTGTCATGGTCACTGCTCATGCAGTGCTGGAAAAGAAGCTTTTCTGTATG
GAGTGGAAGAATCAGCGGAAGTTGGCAATATTCAATCCTGAGGACAATTC
ATGGAAAATGGTTCCGGTTCCTTTGACAGGGAGTTCAAGCATTGGTTTTC
GGTTTGGGATACTGGATGGTAAGTTGTTGCTGTTCTCACTTGAGGAAGAG
CCTTCATACAAGACTTTGTTGTATGATCCAAATGCAGCCCCTGGATCTGA
ATGGCAGACTTCTGATATAAGGCCATCTGGTTTGTGCTTATGCTGTGTAA
CTATCAAGGCCTGA
back to top

protein sequence of rna-KK1_025158_Cc_Asha_v1.0

>rna-KK1_025158_Cc_Asha_v1.0 ID=rna-KK1_025158_Cc_Asha_v1.0; Name=rna-KK1_025158_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=387bp
MPGFVAEKKRFSEPNMCFPNLANHDERPLTKSNHYVSEALDDVDDGSSPI
LPGLPDDVSKHCLALVPRSNSPAMGGVCKRWRCFIRSKEFITVRKLAGMH
EEWLYILTAGSEGNGSQWEVMDCLGQNRRSLPLMPGPAKAGFGVVVLNGK
LLVMAGYSSIDGTTSVSAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNG
LVYAVGGYGTDGDSLSSAEVYDPDTDKWTPIESLRRPRWGCFACGFEGKL
YVMGGRSRFTIGNSKFVDVYNPKKHNWCEMKNGCVMVTAHAVLEKKLFCM
EWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEE
PSYKTLLYDPNAAPGSEWQTSDIRPSGLCLCCVTIKA
back to top

mRNA from alignment at Scaffold136490-KQ483418.1:545789..547859+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_025158_Cc_Asha_v1.0 ID=rna-KK1_025158_Cc_Asha_v1.0; Name=rna-KK1_025158; organism=Cajanus cajan; type=mRNA; length=2071bp; location=Sequence derived from: Scaffold136490-KQ483418.1:545789..547859+ (Cajanus cajan
ATGCCTGGTTTTGTGGCTGAAAAGAAGAGATTTTCTGAGCCAAATATGTG TTTTCCCAATTTGGCCAACCATGATGAACGGCCTCTCACAAAAAGCAATC ATTATGTGAGTGAGGCTCTGgatgatgttgatgatggtAGTAGCCCCATC CTACCTGGGCTGCCTGATGATGTTTCAAAGCACTGCCTTGCACTCGTGCC TCGTTCTAACTCCCCTGCAATGGGTGGTGTCTGTAAGAGATGGAGGTGCT TTATTCGAAGCAAGGAATTCATAACTGTGAGAAAATTGGCTGGGATGCAT GAGGAATGGCTCTATATCTTGACAGCAGGTAGTGAAGGAAATGGGAGCCA GTGGGAGGTCATGGATTGTCTCGGTCAAAATCGCCGTTCTCTTCCGCTGA TGCCTGGTCCAGCGAAGGCTGGCTTTGGGGTAGTGGTTCTTAATGGAAAG CTCCTTGTTATGGCTGGTTATTCATCGATTGATGGAACTACCTCTGTCTC AGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGGTATGCTTTTCTAC TGTAACTTTACTTGGATGCCTTGAGAACTTATTACACTTGATATGATAAT TCCTTCTATATAATTGAGTTAATGGAGGATTATGTTGTGAACTGTATTGG GAGATATAAACCTGTAATATTGATTTTTTGAGCCTATAATTTTTTCTACA GGGATAAAATAATGGACAAAACTTAGCTGCAGTTTCTTAAGCATGGTTGA GGTTGTTCTTTAATAAAACTGAAGTTTTACCTCAGTAATATGCATTTACA TTTAATGCAGACTTTATTAATATACATTCATTAAATGTAAAATGCATATT ATGAAGGTAAAATTCTCATTTTGGTTGAAAAACAACACCTATCATGATTA AGGAACTGCATCTAAGTTTTGCCCTAAAATAATCCTGCTATTAGTTCTCT GGTTCATTATAGTTTATCCATTTCAGGAATGTTGGTTTCAGAAATTAGAA CTGAAGTCTATGCTTAGAAGTCTTTTGCTATTAGATTTTAACTTTGGAAG AAGTGTCTTTTACTACGAGAATTGTTTCACTCAAACACTAAATAAAGTCA AAACTAGAAGAAACCTTGGAATGGTTTGATACAAATTGAGTTGTATGATT TTAGTCTCCCAGTTTTGTAAGGCCTTAAAatgattagttatttttaactt ttccaGGGAAAAAACATTAGCAATGTTGTTACATGAATTCTGAAACATGA AATATGCTTTAATCATGCATCAGCCTCATTTTCATTGCGTGCTTtacatc tatatttattttcttatgttaTTGATGAAGTTGCAGGACTTAAACAATGG TCATGTCTTATGTTTAATTTAGCTAGATATTGTATGGGTTACCATGATAC ATGTTGCTATAGCTATTATTAAAGTATGCATTTGCAATTGCAGCTGGAGC AGATTGTCAAACATGAATGTGGCACGCTATGACTTTGCTTGTGCTGAAGT CAATGGCTTGGTTTATGCTGTTGGCGGCTACGGCACAGACGGTGACAGTC TCTCCAGTGCAGAGGTGTATGACCCTGATACCGACAAATGGACGCCGATA GAGAGCCTTCGTCGCCCGAGATGGGGTTGCTTTGCCTGTGGATTTGAGGG GAAGCTGTATGTGATGGGGGGAAGGTCAAGATTTACAATTGGAAACTCCA AGTTTGTTGATGTGTACAACCCCAAGAAGCACAACTGGTGTGAGATGAAA AACGGGTGTGTCATGGTCACTGCTCATGCAGTGCTGGAAAAGAAGCTTTT CTGTATGGAGTGGAAGAATCAGCGGAAGTTGGCAATATTCAATCCTGAGG ACAATTCATGGAAAATGGTTCCGGTTCCTTTGACAGGGAGTTCAAGCATT GGTTTTCGGTTTGGGATACTGGATGGTAAGTTGTTGCTGTTCTCACTTGA GGAAGAGCCTTCATACAAGACTTTGTTGTATGATCCAAATGCAGCCCCTG GATCTGAATGGCAGACTTCTGATATAAGGCCATCTGGTTTGTGCTTATGC TGTGTAACTATCAAGGCCTGA
back to top

Coding sequence (CDS) from alignment at Scaffold136490-KQ483418.1:545789..547859+

>rna-KK1_025158_Cc_Asha_v1.0 ID=rna-KK1_025158_Cc_Asha_v1.0; Name=rna-KK1_025158; organism=Cajanus cajan; type=CDS; length=2328bp; location=Sequence derived from: Scaffold136490-KQ483418.1:545789..547859+ (Cajanus cajan
ATGCCTGGTTTTGTGGCTGAAAAGAAGAGATTTTCTGAGCCAAATATGTG
TTTTCCCAATTTGGCCAACCATGATGAACGGCCTCTCACAAAAAGCAATC
ATTATGTGAGTGAGGCTCTGgatgatgttgatgatggtAGTAGCCCCATC
CTACCTGGGCTGCCTGATGATGTTTCAAAGCACTGCCTTGCACTCGTGCC
TCGTTCTAACTCCCCTGCAATGGGTGGTGTCTGTAAGAGATGGAGGTGCT
TTATTCGAAGCAAGGAATTCATAACTGTGAGAAAATTGGCTGGGATGCAT
GAGGAATGGCTCTATATCTTGACAGCAGGTAGTGAAGGAAATGGGAGCCA
GTGGGAGGTCATGGATTGTCTCGGTCAAAATCGCCGTTCTCTTCCGCTGA
TGCCTGGTCCAGCGAAGGCTGGCTTTGGGGTAGTGGTTCTTAATGGAAAG
CTCCTTGTTATGGCTGGTTATTCATCGATTGATGGAACTACCTCTGTCTC
AGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGATGCCTGGTTTTGT
GGCTGAAAAGAAGAGATTTTCTGAGCCAAATATGTGTTTTCCCAATTTGG
CCAACCATGATGAACGGCCTCTCACAAAAAGCAATCATTATGTGAGTGAG
GCTCTGgatgatgttgatgatggtAGTAGCCCCATCCTACCTGGGCTGCC
TGATGATGTTTCAAAGCACTGCCTTGCACTCGTGCCTCGTTCTAACTCCC
CTGCAATGGGTGGTGTCTGTAAGAGATGGAGGTGCTTTATTCGAAGCAAG
GAATTCATAACTGTGAGAAAATTGGCTGGGATGCATGAGGAATGGCTCTA
TATCTTGACAGCAGGTAGTGAAGGAAATGGGAGCCAGTGGGAGGTCATGG
ATTGTCTCGGTCAAAATCGCCGTTCTCTTCCGCTGATGCCTGGTCCAGCG
AAGGCTGGCTTTGGGGTAGTGGTTCTTAATGGAAAGCTCCTTGTTATGGC
TGGTTATTCATCGATTGATGGAACTACCTCTGTCTCAGCAGAGGTTTACC
AATATGATTCTTGCCTCAACAGCTGGAGCAGATTGTCAAACATGAATGTG
GCACGCTATGACTTTGCTTGTGCTGAAGTCAATGGCTTGGTTTATGCTGT
TGGCGGCTACGGCACAGACGGTGACAGTCTCTCCAGTGCAGAGGTGTATG
ACCCTGATACCGACAAATGGACGCCGATAGAGAGCCTTCGTCGCCCGAGA
TGGGGTTGCTTTGCCTGTGGATTTGAGGGGAAGCTGTATGTGATGGGGGG
AAGGTCAAGATTTACAATTGGAAACTCCAAGTTTGTTGATGTGTACAACC
CCAAGAAGCACAACTGGTGTGAGATGAAAAACGGGTGTGTCATGGTCACT
GCTCATGCAGTGCTGGAAAAGAAGCTTTTCTGTATGGAGTGGAAGAATCA
GCGGAAGTTGGCAATATTCAATCCTGAGGACAATTCATGGAAAATGGTTC
CGGTTCCTTTGACAGGGAGTTCAAGCATTGGTTTTCGGTTTGGGATACTG
GATGGTAAGTTGTTGCTGTTCTCACTTGAGGAAGAGCCTTCATACAAGAC
TTTGTTGTATGATCCAAATGCAGCCCCTGGATCTGAATGGCAGACTTCTG
ATATAAGGCCATCTGGTTTGTGCTTATGCTGTGTAACTATCAAGGCCTGA
CTGGAGCAGATTGTCAAACATGAATGTGGCACGCTATGACTTTGCTTGTG
CTGAAGTCAATGGCTTGGTTTATGCTGTTGGCGGCTACGGCACAGACGGT
GACAGTCTCTCCAGTGCAGAGGTGTATGACCCTGATACCGACAAATGGAC
GCCGATAGAGAGCCTTCGTCGCCCGAGATGGGGTTGCTTTGCCTGTGGAT
TTGAGGGGAAGCTGTATGTGATGGGGGGAAGGTCAAGATTTACAATTGGA
AACTCCAAGTTTGTTGATGTGTACAACCCCAAGAAGCACAACTGGTGTGA
GATGAAAAACGGGTGTGTCATGGTCACTGCTCATGCAGTGCTGGAAAAGA
AGCTTTTCTGTATGGAGTGGAAGAATCAGCGGAAGTTGGCAATATTCAAT
CCTGAGGACAATTCATGGAAAATGGTTCCGGTTCCTTTGACAGGGAGTTC
AAGCATTGGTTTTCGGTTTGGGATACTGGATGGTAAGTTGTTGCTGTTCT
CACTTGAGGAAGAGCCTTCATACAAGACTTTGTTGTATGATCCAAATGCA
GCCCCTGGATCTGAATGGCAGACTTCTGATATAAGGCCATCTGGTTTGTG
CTTATGCTGTGTAACTATCAAGGCCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR001810F-box_dom
IPR011498Kelch_2
IPR015915Kelch-typ_b-propeller
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding