rna-KK1_025163

Transcript Overview
Namerna-KK1_025163
Unique Namerna-KK1_025163_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length2337
ProductU-box domain-containing protein 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0202Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0205Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR165Pisum sativum Cameor genome v1aPisum sativum
ccpsR166Pisum sativum Cameor genome v1aPisum sativum
ccpsR167Pisum sativum Cameor genome v1aPisum sativum
ccccL001Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvR0260Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0261Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0261Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0262Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccL0542Cicer arietinum ICC 4958 genome v2Cicer arietinum
caiccL0718Cicer arietinum ICC 4958 genome v2Cicer arietinum
caccL0581Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0767Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0271Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0272Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0386Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0444Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0929Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0053Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0672Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0207Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0208Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0213Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0214Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0222Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0223Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0235Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0236Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0245Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvssR0247Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0581Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0775Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0387Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0708Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0624Cicer arietinum
carccL0831Cicer arietinum
ccccaR0274Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0275Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0256Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0257Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_20480Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014638721.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat7g078440.1Pisum sativum Cameor genome v1aPisum sativum
Cr_21880.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr01.2311.3.6211317bVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.6g055040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_13030.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-TanjilR_09114Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.2g112040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan01g095300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.001G260300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_01G01546.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg53569.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.2g092040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun03g169300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va03G085140.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014654318.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg30397.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_11008Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_11333Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_13721.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_04G03214.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_33003Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va01G038960.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr03.3723.1.6211317dVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.6g045800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_027334640.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun01g245800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.002G175000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_16304.1Cicer arietinum ICC 4958 genome v2Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_22024.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_019888Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_00100.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_025163gene-KK1_025163_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_025163rna-KK1_025163_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_025163_Cc_Asha_v1.0rna-KK1_025163_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:608354..608404rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:608354..608404Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:608354..608404rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:608354..608404Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:608801..608986rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:608801..608986Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:608801..608986rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:608801..608986Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:609098..609205rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:609098..609205Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:609098..609205rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:609098..609205Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:609540..610702rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:609540..610702Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:609540..610702rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:609540..610702Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:611142..611849rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:611142..611849Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:611142..611849rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:611142..611849Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:612126..612246rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:612126..612246Cajanus cajanexon
rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:612126..612246rna-KK1_025163_Cc_Asha_v1.0-exon-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:612126..612246Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:608354..608404rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:608354..608404Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:608354..608404rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:608354..608404Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:608801..608986rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:608801..608986Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:608801..608986rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:608801..608986Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:609098..609205rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:609098..609205Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:609098..609205rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:609098..609205Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:609540..610702rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:609540..610702Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:609540..610702rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:609540..610702Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:611142..611849rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:611142..611849Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:611142..611849rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:611142..611849Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:612126..612246rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571082112:612126..612246Cajanus cajanCDS
rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:612126..612246rna-KK1_025163_Cc_Asha_v1.0-CDS-Scaffold136490-KQ483418.1_Cc_Asha_v1.0-1571847872:612126..612246Cajanus cajanCDS


Homology
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUB6 PE=2 SV=2)

HSP 1 Score: 996.882 bits (2576), Expect = 0.000e+0
Identity = 527/784 (67.22%), Postives = 620/784 (79.08%), Query Frame = 1
Query:    1 MDVAEVEENLFAVSDAKLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKSGIQALCSLHVALEKVKNILQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFATIEFALDPSEKQVGDDLIALLQQGRKFSDSSDSNELESFHQAATRLGITSSRAALTERRALKKLIERARTEEDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSSPCSPTVQGSIEDSVPGSHSQAFDRQISKLSCFNFKPNNSSKSGLMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWGLVLXXXXXXXXXXXXXXXXCKLKGVQVVPLEESGISEESVE-----NGTESVSVQGEDTEQYFSFLKVLTEENNWRRQCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLHSAVREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTSSYGCTTALYLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQSLLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQR-RDQSPIKTHESPPETSDLSMPPAEMQPLCNDLSMPPAEMQPLCKSISRRKS-GKTFNFFWKSKSYSVYQ 2331
            MDV+E+EENLFA SDAKLHG MCK LS +YCKVLS+FPSLE ARPRSKSGIQ LCSLH+ALEK KNILQHCSECSKLYLAITGD+VLLKFEKAK AL DSLRRVEDIVP SIG Q+ +IV E    +F LDPSEK+VGD +IALLQQG+KF + SDS ELE FHQAATRL ITSSR+AL ERRALKK+I+RAR EEDKRKESIVAYLLHLMRKYSKLFRSE  D+NDS  S+PCSPT QG  ED V      AF RQ+SK    N+KP NS KSG MP+PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN+CPKTQQ+L HL LTPNYCVKGL+ASWCEQNG+ +P GPPESLDLNYW L +S+SES NSKSV+SV  C  K ++VVPLEES   E   +     N  + V  +    E Y   L ++ +E +  ++C+VVE +R+LL+D+EEARI MGANGFVEA LQFL SAV + +  A E+GAMALFNLAVNNNRNKE+ML++GV+ LLE+MIS + S G  TALYLNLSCLE+AKP+IG SQAV F + LL  D   QCK D+LHALYNLST   NIP LLSS I   LQ +L   G+ +WIEKS+AVL+NLA+S  G+EE+++T G+IS LA++LDTG+ +EQEQAV CL+ILC  SE+C +MVLQEGVIP+LVSISVNG+PRGR+K+QKLLMLFREQR RDQ      E+P +T  +S P A   P    +S P +E++PL KSISRRK+  + F+F WK KS+S++ 
Sbjct:    1 MDVSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIALEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIVGELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAERRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPCSTPCSPTGQGPNEDRV-----NAFGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQ-VLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAPRKT--VSAPMAIPAP----VSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSIHH 771          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1 SV=1)

HSP 1 Score: 979.163 bits (2530), Expect = 0.000e+0
Identity = 526/783 (67.18%), Postives = 623/783 (79.57%), Query Frame = 1
Query:    1 MDVAEVEENLFAVSDAKLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKSGIQALCSLHVALEKVKNILQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFATIEFALDPSEKQVGDDLIALLQQGRKFSDSSDSNELESFHQAATRLGITSSRAALTERRALKKLIERARTEEDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSS--PCSPTVQGSIEDSVPGSHSQAFDRQISKLSCFNFKP-NNSSKSGLMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWGLVLXXXXXXXXXXXXXXXXCKLKGVQVVPLEESG-ISEESVENGTESVSVQGEDTEQYFSFLKVLTEENNWRRQCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLHSAVREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTSSYGCTTALYLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQSLLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQR-RDQSPIKTHESPPETSDLSMPPAEMQPLCNDLSMPPAEMQPLCKSISRRKSGKTFNFFWKSKSYSVYQC 2334
            MDV EVEEN FA  DAKLHG+MC  LS+IYCK++S+FPSLEAARPRSKSGIQALCSLHV LEKVKNIL+HC+E SKLYLAITGDSV+LKFEKAK +L DSLRRVEDIV QSIG Q+ EI+ E    EF+LDP+EK++GD +I LLQQG  F  SSD+NELE FHQAATRLGITSSRAALTERR LKKLIERAR E+DKRKESIVAYLLHLMRKYSKLFRSE  DDNDSQGSS  PCSPT+QGSI+D    +H +AFDRQ+SKLS FNF+  NN+ +S  M +PPEELRCPISLQLMYDPVIIASGQTYER+CIEKWFSDGHN CPKT Q+LSHLCLTPNYCVK L++SWCEQNGV +P+GPPESLDLNYW L LS SEST+++S   V SCKLK V+VVPLEESG I EE+ E  +E    Q    E+    L  LT+ +  R++C VVEQ+R+LL+DDEEARI MG NG VEALLQFL SA+ E +  A + GAMALFNLAV+NNRNKE+ML++G++ LLEEM+    S+G  TA+YLNLSCLEEAKP+IG S AV F++ LL ++ +VQCK D+LH+L++LST P NIP LLS+ + + LQSL + + +  W EKS+AVL+NL  +E G++E++S P L+S L +ILDTGE  EQEQAV  LLILCN SE CSEMVLQEGVIP+LVSISVNGT RGRE+AQKLL LFRE R RDQ    TH + P+ ++++ P           S    E +P CKS SR+K G+ F+F WKSKS+SVYQC
Sbjct:    1 MDVNEVEENFFAPGDAKLHGKMCNALSVIYCKIMSIFPSLEAARPRSKSGIQALCSLHVVLEKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEILMELENTEFSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALTERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTIQGSIDD----AHGRAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIKEEACE--SEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISD-EQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQRDQ----THLTEPQHTEVTSPEDGFSV----ASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQC 768          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB7_ARATH (U-box domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=PUB7 PE=2 SV=1)

HSP 1 Score: 962.985 bits (2488), Expect = 0.000e+0
Identity = 525/792 (66.29%), Postives = 608/792 (76.77%), Query Frame = 1
Query:    1 MDVAEVEENLFAVSDAKLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKSGIQALCSLHVALEKVKNILQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFATIEFALDPSEKQVGDDLIALLQQGRKFSDSSDSNELESFHQAATRLGITSSRAALTERRALKKLIERARTEEDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSSPCSPTV-QGSIEDSVPGSHSQAFDRQISKLSCFNFKPNNSSKSGLMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWGLVLXXXXXXXXXXXXXXXXCKLKGVQVVPLEESGISEESVENGTESVSVQGEDT--------EQYFSFLKVLTEENNWRRQCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLHSAVREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTSSYGCTTALYLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQSLLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQR--RDQSPIKTHESP---PETSDLSMPPAEMQPLCNDLSMPPAEMQPLCKSISRRKS-GKTFNFFWKSKSYSVYQ 2331
            MDV E+EENLFA SDAKLHG MCK LS + CKVLS+FPSLE ARPRSKSGIQALCSLH+ALEK KNILQHCSECSKLYLAITGD+VLLKFEKAK AL D L+RVEDIVP SIG Q+ EIV E     F LDPSEK+VGD +IALLQQG+KF + +D+ ELE FH+AATRL ITSSR AL ERRALKKLI+RAR EEDKRKESIVAYLLHLMRK SKLFRSE  D+NDS GS PCSP    GS+           F RQ+S+    N KP NS  SG MP+PPEELRCPISLQLM DPVIIASGQTYERVCIEKWFSDGHN CPKTQQ+L H+ LTPN CVKGL+ASWCEQNG  IP GPPES DL+YW L LS+SEST S+SVNS+ S KLKGV++VPLEE+G +    +N  ES     +D         E+Y   L VL EE    ++C+VVE++RLLL+DDEEARIFMGANGFVEALL+FL SAV + +  A +SGAMALFNLAVNNNRNKE+ML++GV+ LLE+MIS   S+G  TALYLNLSCL+EAK +IG SQAV FL+QLLQ + + QCK D+LHALYNLST   NIP LLSS I   LQ LL   G+ +WIEKS+AVL+NLA+S+ G++E +S+ G+IS+LA++LD G+  EQEQAV CLLILCN  E+C +MVLQEGVIP+LVSISVNGTPRGREK+QKLLMLFRE+R  RDQ      E P   P    LS P +         S+   E + L KS+SRRKS  + F+FFWK KSYSV +
Sbjct:    1 MDVTELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIALEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVGELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAERRALKKLIDRARAEEDKRKESIVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPNEDHGSV---------HGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSVRE 782          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.101e-45
Identity = 179/676 (26.48%), Postives = 303/676 (44.82%), Query Frame = 1
Query:  112 PSLEAARPRSKSG---IQALCSLHVALEKVKNILQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFATIEFALDPSEKQVGDDLIALLQQ-GRKFSDSSDSNELESFHQAATRLGITSSRAALTERRALKKLIERAR--TEEDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSSPCSPTVQGSIEDSVPGSHSQAFDRQISKLSCFNFKPNNSSKSGLMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWGLVLXXXXXXXXXXXXXXXXCKLKGVQVVPLEESGISEESVENGTESVSVQGEDTEQYFSFLKVLTEENNWRRQCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLHSAVREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTS--SYGCTTALYLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQSLLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLF 2115
            P LE  R   +S    + AL S+  +L   K++L   S  SK+YL +  D V++KF+K    LE +L     I+P             +  +E + D  ++QV   L+ L +  G++  D  D    +        L + S R ++ E   ++++ E+ +  T  D  +ES+   LL ++           S  +D   S      V   I+D V   +    D  +   S     P +      M +PPEE RCPISL+LM DPVI++SGQTYER CI+KW   GH  CPKTQ+ L+   +TPNY ++ L+A WCE NG+     PP+  +++      S S S      N +    LK                        S Q ED       +++L ++NN  R                   + + A+G +  L+  L   +   S    E    ++ NL++      +I+ S+G +  +  ++ K S  +     A   +LS ++E K  IG + A+  L+ LL S+   + K+D+  AL+NL     N    + +G+   L  LL  E +   +++S+++L  L++   G+ E+ +    +  L   + +G    +E +   L+ LC+ ++       + G++  L+ ++ NGT RG+ KA +LL  F
Sbjct:   46 PMLEEIRDNQESSSEVVNALLSVKQSLLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQAL----SIIP-------------YENLEIS-DELKEQVELVLVQLRRSLGKRGGDVYDDELYKDV------LSLYSGRGSVMESDMVRRVAEKLQLMTITDLTQESLA--LLDMVSS---------SGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRLKSSL---PKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGIE----PPKRPNISQPSSKASSSSSAPDDEHNKIEELLLK----------------------LTSQQPEDRRSAAGEIRLLAKQNNHNR-------------------VAIAASGAIPLLVNLL--TISNDS-RTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLL-SEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLT-EPESGMVDESLSILAILSSHPDGKSEVGAADA-VPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRF 632          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.123e-41
Identity = 131/442 (29.64%), Postives = 203/442 (45.93%), Query Frame = 1
Query:  832 PLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWGLVLXXXXXXXXXXXXXXXXCKLKGVQVVPLEESGISEESVENGTESVSVQGEDTEQYFSF--LKVLTEENNWRRQCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLHSA---VREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTSSYGC---TTALYLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQSLLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQRRD 2133
            P+ P+E RCPISL+LM DPVI++SGQTYER CI+KW   GH  CPKTQQ LSH  LTPN+ +K L++ WCE NG+ +P+    S D                           K  +    + +G+   S+ N   S    G   EQ  +   +++L + N   R C                   +   G +  L+  L S+    +E ++ AL        NL+++ N    I+ S  +  ++E  + KT S        A   +LS ++E K  IG + A+  LI LL  D   + K+D+  A++NL     N    + +GI   L + LV     M I++++++L  LA +  G+  +++    I  L  ++ TG    +E A   L +LC+     +      GV  AL  +S  GT R + KA  +L L  +   D
Sbjct:  226 PIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGIELPKNKQNSRD--------------------------KKAAKSSDYDHAGLV--SLMNRLRS----GNQDEQRAAAGEIRLLAKRNVNNRIC-------------------IAEAGAIPLLVNLLSSSDPRTQEHAVTAL-------LNLSIHENNKASIVDSHAIPKIVE--VLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLL-CDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGM-IDEALSLLSILAGNPEGK-IVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQANED 604          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.937e-37
Identity = 143/483 (29.61%), Postives = 221/483 (45.76%), Query Frame = 1
Query:  841 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNY----WGLVLXXXXXXXXXXXXXXXXCKLKGVQVVPLEES--GISEESV------ENGTESVSVQGEDTEQYFSFLKVLTEENNWRRQCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLHSAVREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTSSYGCTTAL--YLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSN------------IPYLLSSGITSGL----------------QSLLVGEGDCMW-----------IEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQRR 2130
            P + RC +SL+LM DPVI+ASGQT+ERV I+KW   G   CPKT+Q LSH  LTPN+ V+  +ASWCE N V     PP+ L+L +    + L++    +++S++ +S S    +  QV     S  GI  E V       N     S+   +T   F       EE +WR    +   +R             G++  +E  ++ L   ++  SL         +  LA N+  N+ ++     +  L  ++  T       A+   LNLS  +  K +I  S A+  LI +L++    + K +S   L++LS +               +  LL SG  SG                 ++ ++  G   +           +EK++ VL NLAT   G+  I    G I  L  +++ G    +E A   LL LC  S      V++EGVIP LV+++ +GT RG+EKAQ LL  F+  R+
Sbjct:  241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNV----YPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFP------EERHWRHPGIIPATVRET-----------GSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAI-GEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQ 701          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.340e-37
Identity = 126/445 (28.31%), Postives = 204/445 (45.84%), Query Frame = 1
Query:  805 NNSSKSGLMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWGLVLXXXXXXXXXXXXXXXXCKLKGVQVVPLEESGISEESVENGTESVSVQGEDTEQYFSFLKVLTEENNWRRQCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLHSAVREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTSSYGC---TTALYLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQSLLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQRR 2130
            ++S KS  + +P E+  CPISL+LM DP I+++GQTYER  I++W   G+ +CPKTQQ+L +  LTPNY ++ L++ WC ++ +  P G       N  G   S  + +   S      CKL             S +S+E+   +VS       +  S  K  T+                        RI +   G +  L++ L S   +G     E+    + NL++  +  + IML+  V S++  ++ +  S        A   +LS  +E K +IG S A+  L+ LLQ    V+ K+D+  AL+NL     N    + +GI   L  +L         ++++ +L  LA+++V +  IL     I  L   L   +   +E A   LL LC R       + + G +  L+ +S +GT R + KA  LL L R+  R
Sbjct:  233 DDSQKSDNLTIP-EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDG---SFRDLSGDMSAIRALVCKL-------------SSQSIEDRRTAVS-------EIRSLSKRSTDN-----------------------RILIAEAGAIPVLVKLLTS---DGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIV--LVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQY-GSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANA-IPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSSR 623          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.114e-34
Identity = 104/364 (28.57%), Postives = 187/364 (51.37%), Query Frame = 1
Query:   13 EVEENLFAVSDAKLH-GQMCKTLSIIYCKVLSVFPSL-EAARPRSKSGIQALCSLHVALEKVKNILQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRV---EDIVPQSIGCQVQEIVNEFATIEFALDPSEKQVGDDLIALLQQGRKFSDSSDSNELES-FHQAATRLGITSSRAALTERRALKKLIERARTEEDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSSPCSPTVQGSIEDSVPGSHSQAFDRQISKLSCFNFKPNNSSKSGLMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESL 1086
            +V   + A+SD ++   ++C  L+     ++ +F  + E+  P S+  ++ L +L  A+   K+ L+ CS+ SK+YL +  + V  K  +    LE SL ++   E  +   +  QV+ ++++F   +  +D S+ ++ +DL +L  +      SSD +  +    + A +L +        E  AL +++  +  +  +  E + A +L +++ +      +  DDN                E+   G +S++  +             +++ S  +P+ P++ RCPISL++M DPVI++SGQTYER CIEKW   GH+ CPKTQQ L+   LTPNY ++ L+A WCE N +  P+ PP SL
Sbjct:   14 DVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQSLCNK------SSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVASSGGDVGENIEEM-AMVLKMIKDF-----VQTEDDNG---------------EEQKVGVNSRSNGQ------------TSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIEPPK-PPSSL 337          

HSP 2 Score: 72.0182 bits (175), Expect = 1.190e-11
Identity = 61/217 (28.11%), Postives = 110/217 (50.69%), Query Frame = 1
Query: 1462 ESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTS--SYGCTTALYLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQSLLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQKLL 2106
            E    AL NL++  N NK  ++SAG +  + +++ K S  +     A   +LS ++E K  IG   A+  L+ LL ++   + K+D+  AL+NL     N    + +G+   L  LL   G  M +++++A+L  L++   G+  I+ +   + +L   + TG    +E A   L+ LC+          + G++  L+ ++ NGT RG+ KA +LL
Sbjct:  412 EHSVTALLNLSICEN-NKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLL-NEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGM-VDEALAILAILSSHPEGKA-IIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLL 624          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB5_ARATH (U-box domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PUB5 PE=3 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 4.068e-32
Identity = 71/187 (37.97%), Postives = 115/187 (61.50%), Query Frame = 1
Query:   49 KLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKSGIQALCSLHVALEKVKNILQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFATIEFALDPSEKQVGDDLIALLQQGRKFSDSSDSNELESFHQAATRLGITSSRAALTERRALKKLIERARTEEDKRKESI 609
            K+H  MC  L  +  +++ +FP +E ARP   SGIQ LC LH AL+K K +LQ+CSE SKLY+A+TGD++L +  +AK +LE  L  +  IVP  +  ++ +IV +  + +  L+ SE++ G  +  L+Q+    S S+  +E++ FH AA +L +++  A +TERR+LK + E  +       +SI
Sbjct:   14 KMHSSMCLELKRLVDRIMRIFPDIEDARPGCSSGIQTLCLLHNALDKTKQLLQYCSESSKLYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEFSEEEAGKAIRELMQKST--SSSASPDEIKDFHYAALKLQLSTPEAIVTERRSLKIICEDHKQNSFTHHQSI 198          

HSP 2 Score: 88.1965 bits (217), Expect = 1.230e-16
Identity = 32/74 (43.24%), Postives = 54/74 (72.97%), Query Frame = 1
Query:  841 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPI 1062
            PE+ +C +S  +MYDPVII+SG T+ER+ I+KWF +G+++CP ++++L    L PN  +K  ++ WC +NG+ +
Sbjct:  220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKSQISEWCAKNGLDV 293          
BLAST of rna-KK1_025163 vs. DB:Swiss
Match: PUB1_MEDTR (U-box domain-containing protein 1 OS=Medicago truncatula OX=3880 GN=PUB1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.643e-30
Identity = 169/692 (24.42%), Postives = 293/692 (42.34%), Query Frame = 1
Query:  121 EAARPRSKSGIQALCSLHVALEKVKNILQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEF---------ATIEFALDPSEKQVGDDLIALLQ----QGRKFSDSSDSNELESFHQAATRLGITSSRAALTERRALKKLIERARTEEDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSSPCSPTVQGSIEDSVPGSHSQAFDRQISKLSCFNFKPNNSSKSGLMPLP-PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWGLVLXXXXXXXXXXXXXXXXCKLKGVQVVPLEESGISEESVENGTES--VSVQGEDTEQYFS------FLKVLTEENNWRRQCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLHSAVREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMISKTSSYG---CTTALYLNLSCLEEAKPMIGMSQAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQSLLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGELLEQEQAVCCLLILCNRSETCSEMVLQEG--VIPALVSISVNGTPRGREKAQKLLMLF 2115
            E+  P   S I     +   + +VK ++Q C++ S L+  I  D +  +F      L   + R  DI+P ++    Q+I  +            +E  +DP E Q  ++L  ++     Q +K +++    +     +    +G+ +    + E   + KL   A+ +       +V+ + +LM   S      F +D +S+   P S                  F    SK+   +   ++S    +M +  P+E RCPISL LM DPVI++SG TY+R+ I +W + GH+ CPK+ QRL H  L PNY +K LV  WC +N V + E   ++ + +        +    S++  S  + K+    +V    +G ++   ++  E   ++  G D  +  +      FL  L    + R Q  VV  L  L   D    + M A G ++ +++ L       ++ A E+ A A+++L++ ++   +I  S+  +  L  ++ + +  G     TAL+ NL+     K  I  S AV  L++LL  D                            +GIT                + S+AVL  L     G EEI ++  L+  L  +L  G +  +E ++  LL LC        M L      IP+L S++ +G+ R R KA  LL L 
Sbjct:   64 ESDSPLPPSSILCFIEIFSVITRVKVLIQECTDGSSLWSLIQLDFISNQF----FVLVKEMGRALDILPLNLLNVAQDIKEQVDLLHKQSKRVELELFIDPREVQRRENLFEVMSKNCLQNKKTNNNKGFIDFVKVEEIMCSIGLRTLSDYVEE---ISKLEVEAQNQAGTGGLIVVSNINNLMSLVSYTKSMVFRNDGESEECKPIS-----------------MFLYNKSKIHDNDSSSSSSFSQSMMTVNIPDEFRCPISLDLMRDPVIVSSGHTYDRISIAEWINSGHHTCPKSGQRLIHTALIPNYALKSLVHQWCYENNVKMNEAITKNNNSSSKRHKNENAIDHISENKASKDAVKMTAEFLVGKLATGSTDIQRQSAYEIRLLAKTGMDNRRIIAEVGAIPFLVTLLVSKDSRIQEHVVTALFNLSIYDNNKILIMAA-GAIDNIVEVLEFG---KTMEARENAAAAIYSLSMIDDCKVQIGASSRAIPALVGLLKEGTIIGKRDAATALF-NLAVYNPNKLSIVKSGAVTLLVELLMDD---------------------------KAGIT----------------DDSLAVLAVLLGCSEGLEEIKNSKSLVPLLIDLLRFGSVKGKENSITLLLGLCKEEGELVAMRLLANPRSIPSLQSLAADGSLRARRKADALLRLL 683          
The following BLAST results are available for this feature:
BLAST of rna-KK1_025163 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PUB6_ARATH0.000e+067.22U-box domain-containing protein 6 OS=Arabidopsis t... [more]
PUB45_ARATH0.000e+067.18U-box domain-containing protein 45 OS=Arabidopsis ... [more]
PUB7_ARATH0.000e+066.29U-box domain-containing protein 7 OS=Arabidopsis t... [more]
PUB12_ARATH1.101e-4526.48U-box domain-containing protein 12 OS=Arabidopsis ... [more]
PUB12_ORYSJ2.123e-4129.64U-box domain-containing protein 12 OS=Oryza sativa... [more]
PUB2_ARATH1.937e-3729.61U-box domain-containing protein 2 OS=Arabidopsis t... [more]
PUB10_ARATH2.340e-3728.31U-box domain-containing protein 10 OS=Arabidopsis ... [more]
PUB13_ARATH3.114e-3428.57U-box domain-containing protein 13 OS=Arabidopsis ... [more]
PUB5_ARATH4.068e-3237.97U-box domain-containing protein 5 OS=Arabidopsis t... [more]
PUB1_MEDTR5.643e-3024.42U-box domain-containing protein 1 OS=Medicago trun... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 283..346
e-value: 3.8E-31
score: 119.5
IPR003613U box domainPFAMPF04564U-boxcoord: 281..350
e-value: 1.9E-17
score: 63.2
IPR003613U box domainPROSITEPS51698U_BOXcoord: 279..353
score: 41.338
IPR000225ArmadilloSMARTSM00185arm_5coord: 455..499
e-value: 7.2
score: 14.3
coord: 540..581
e-value: 4.9
score: 15.6
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 466..512
score: 10.237
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 280..353
e-value: 1.8E-26
score: 94.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 422..713
e-value: 1.6E-29
score: 104.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 710..730
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..250
NoneNo IPR availableCDDcd16664RING-Ubox_PUBcoord: 284..326
e-value: 5.05954E-25
score: 95.7634
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 274..355
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 428..707

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_025163_Cc_Asha_v1.0 ID=rna-KK1_025163_Cc_Asha_v1.0; Name=rna-KK1_025163; organism=Cajanus cajan; type=mRNA; length=2337bp
ATGGATGTTGCTGAGGTTGAAGAGAATCTATTTGCCGTAAGTGATGCCAA
GTTACATGGACAAATGTGCAAGACCCTTTCTATAATATACTGCAAAGTAT
TGTCTGTATTTCCTTCTTTAGAAGCTGCTAGGCCTAGGAGTAAATCTGGT
ATTCAGGCATTATGTTCATTGCATGTAGCCTTAGAGAAAGTCAAGAATAT
TCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACTTGGCTATAACTGGAG
ATTCTGTCCTTCTAAAATTTGAGAAGGCTAAATGTGCTCTTGAAGATAGT
CTTAGACGGGTGGAAGATATTGTTCCACAATCTATAGGTTGTCAGGTTCA
GGAGATTGTGAATGAATTTGCGACTATAGAATTTGCACTTGACCCATCAG
AAAAGCAAGTTGGTGATGATTTAATAGCATTGCTCCAACAGGGAAGAAAG
TTTAGTGACTCTAGTGACAGCAATGAGCTTGAATCTTTTCACCAGGCTGC
TACAAGACTTGGAATCACATCTTCAAGAGCAGCTCTTACTGAAAGAAGAG
CTCTCAAGAAACTCATAGAAAGGGCTAGAACTGAGGAAGACAAGCGGAAG
GAATCAATTGTTGCATATCTTTTACATCTTATGAGGAAATACTCCAAGTT
ATTTAGAAGTGAGTTCTCGGATGACAATGATTCTCAGGGTTCTTCACCTT
GTTCTCCCACTGTTCAGGGATCTATTGAGGATAGTGTTCCTGGTAGTCAC
TCACAAGCCTTTGACAGACAGATTTCAAAACTCAGTTGTTTTAATTTCAA
ACCAAATAATAGTAGCAAGTCAGGGCTGATGCCTCTTCCACCTGAAGAGT
TAAGGTGTCCAATATCTCTGCAACTTATGTATGATCCTGTTATCATTGCT
TCTGGGCAAACATATGAAAGGGTTTGTATAGAGAAATGGTTCAGTGATGG
GCACAACAACTGCCCAAAGACCCAACAGAGACTTTCACATCTTTGTTTGA
CTCCTAATTACTGTGTTAAGGGCCTTGTTGCTAGTTGGTGTGAACAAAAT
GGAGTTCCTATTCCTGAAGGCCCTCCTGAATCCCTTGATCTTAACTACTG
GGGGTTGGTATTATCAGAGTCTGAATCTACAAATTCAAAATCTGTAAATA
GTGTCAGCTCTTGCAAGTTGAAGGGTGTCCAAGTGGTTCCTTTGGAAGAG
AGTGGTATCTCAGAGGAATCTGTGGAAAATGGAACTGAAAGTGTGTCTGT
ACAAGGGGAAGACACTGAGCAGTATTTTAGTTTTCTGAAAGTCCTGACTG
AGGAGAACAATTGGAGGAGGCAATGTGAAGTGGTAGAACAGTTAAGGCTG
TTGCTGAGGGATGATGAGGAAGCTAGGATTTTTATGGGGGCTAATGGGTT
TGTTGAAGCACTTTTGCAGTTTTTGCATTCAGCTGTGCGTGAAGGTAGTT
TGATGGCTCTGGAAAGTGGAGCAATGGCTCTCTTCAACTTGGCTGTGAAT
AATAACAGAAATAAGGAAATTATGTTATCAGCTGGAGTATTATCGTTATT
GGAGGAAATGATTTCAAAAACTAGTTCTTATGGTTGTACAACTGCTCTTT
ATTTGAATCTCTCTTGCCTTGAAGAAGCCAAGCCTATGATTGGCATGAGT
CAGGCTGTCCAGTTCCTTATCCAACTTCTTCAATCTGACGCTGATGTTCA
ATGCAAGCAAGATTCTCTCCATGCTCTCTATAATCTTTCTACTGTGCCTT
CCAATATTCCGTACCTCCTTTCATCTGGCATCACTAGTGGTTTACAATCC
CTTCTTGTAGGCGAGGGTGATTGCATGTGGATAGAAAAAAGCATAGCTGT
TTTGATAAATTTAGCTACTTCAGAAGTTGGTAGGGAGGAAATTTTATCTA
CACCTGGACTCATTAGTGCATTGGCTTCGATATTGGACACTGGTGAGCTC
TTAGAACAGGAGCAAGCTGTGTGTTGCCTCCTAATTTTGTGCAATAGAAG
TGAGACTTGTAGTGAGATGGTACTGCAAGAAGGGGTTATACCAGCATTGG
TTTCAATATCAGTGAACGGGACCCCAAGAGGAAGAGAAAAAGCTCAGAAA
CTCTTGATGCTGTTCCGAGAGCAGCGAAGGGACCAATCACCAATTAAGAC
ACATGAGAGCCCACCTGAAACCAGTGATTTGTCTATGCCTCCTGCTGAGA
TGCAACCGCTATGCAATGATTTGTCTATGCCGCCGGCTGAAATGCAACCG
CTATGCAAGTCGATTTCAAGAAGAAAGTCTGGGAAGACTTTCAACTTTTT
CTGGAAAAGCAAGAGCTATTCTGTTTACCAGTGTTAA
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protein sequence of rna-KK1_025163_Cc_Asha_v1.0

>rna-KK1_025163_Cc_Asha_v1.0 ID=rna-KK1_025163_Cc_Asha_v1.0; Name=rna-KK1_025163_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=778bp
MDVAEVEENLFAVSDAKLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKSG
IQALCSLHVALEKVKNILQHCSECSKLYLAITGDSVLLKFEKAKCALEDS
LRRVEDIVPQSIGCQVQEIVNEFATIEFALDPSEKQVGDDLIALLQQGRK
FSDSSDSNELESFHQAATRLGITSSRAALTERRALKKLIERARTEEDKRK
ESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSSPCSPTVQGSIEDSVPGSH
SQAFDRQISKLSCFNFKPNNSSKSGLMPLPPEELRCPISLQLMYDPVIIA
SGQTYERVCIEKWFSDGHNNCPKTQQRLSHLCLTPNYCVKGLVASWCEQN
GVPIPEGPPESLDLNYWGLVLSESESTNSKSVNSVSSCKLKGVQVVPLEE
SGISEESVENGTESVSVQGEDTEQYFSFLKVLTEENNWRRQCEVVEQLRL
LLRDDEEARIFMGANGFVEALLQFLHSAVREGSLMALESGAMALFNLAVN
NNRNKEIMLSAGVLSLLEEMISKTSSYGCTTALYLNLSCLEEAKPMIGMS
QAVQFLIQLLQSDADVQCKQDSLHALYNLSTVPSNIPYLLSSGITSGLQS
LLVGEGDCMWIEKSIAVLINLATSEVGREEILSTPGLISALASILDTGEL
LEQEQAVCCLLILCNRSETCSEMVLQEGVIPALVSISVNGTPRGREKAQK
LLMLFREQRRDQSPIKTHESPPETSDLSMPPAEMQPLCNDLSMPPAEMQP
LCKSISRRKSGKTFNFFWKSKSYSVYQC
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mRNA from alignment at Scaffold136490-KQ483418.1:608354..612246+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_025163_Cc_Asha_v1.0 ID=rna-KK1_025163_Cc_Asha_v1.0; Name=rna-KK1_025163; organism=Cajanus cajan; type=mRNA; length=3893bp; location=Sequence derived from: Scaffold136490-KQ483418.1:608354..612246+ (Cajanus cajan
ATGGATGTTGCTGAGGTTGAAGAGAATCTATTTGCCGTAAGTGATGCCAA GGTATGATTATGTCTTCGATTATTTTGCATACTGTTTTGGAAAATCTAAT GCTTTTTGCATAGTAAATTGGAAATTGCTTTTCCAGTATGTACAGTCGTT TTGCCAAGGTTTAGTGGAAGACTCAAATCTATTTTCTATTAGTTTATTTG TGTTCTTCATTCATTTaactaaggaaaaaaaaagttaaacctGTCTACCT TTTGAGGTGCATGAACAAAATGCTTTACATGGTTACCATAACTCCTATTT AAGCAAATGTTTTTCGTTGCTGGccaaatgaaaaacaaaaacagtAAGGT CCTGTTTGAATACTGTTTTTCTTGCtctgttttatttattctattttata ttgtcTGAACTGTAGTCTGACCAATTTCTATCTGGTTTCTTATGCAGTTA CATGGACAAATGTGCAAGACCCTTTCTATAATATACTGCAAAGTATTGTC TGTATTTCCTTCTTTAGAAGCTGCTAGGCCTAGGAGTAAATCTGGTATTC AGGCATTATGTTCATTGCATGTAGCCTTAGAGAAAGTCAAGAATATTCTT CAGCACTGCTCAGAGTGTAGTAAACTTTACTTGGTATGATTTTACCTTGT CTTATGAAACAGTTATTCACATTGGCtagtaaaattatttgatcTGAAAT ACATTTTGTAAATAATCTTACATATGGCATTAATTATGATGCAGGCTATA ACTGGAGATTCTGTCCTTCTAAAATTTGAGAAGGCTAAATGTGCTCTTGA AGATAGTCTTAGACGGGTGGAAGATATTGTTCCACAATCTATAGGTTGTC AGGTAATATTATTCAGCAATATGGCTGACACTGTATAGTTTTTTTCCATG TGGGGTTGTGGTGGTTAGTTTTAGCCTTGTAGGTTCTTGATCCTATTATT ATATTGTGTGGAGGGTCTTACTTGTTCTTGCTGATATCTGTTGTGAGCAT ATGAACCgctattttagattttagattttgttATTCCGAAATAATTTAAT GCACCTTGATTACATTACACTAGTTTGGTTTTCTGTAACACTGGCATTCA TATGTGCATATGCACAGATTTTGCTCTttcttgttattgttgttgatgTT TAACCCGGTCTGAGGTTTGATTCATTACCTGTTCAGGTTCAGGAGATTGT GAATGAATTTGCGACTATAGAATTTGCACTTGACCCATCAGAAAAGCAAG TTGGTGATGATTTAATAGCATTGCTCCAACAGGGAAGAAAGTTTAGTGAC TCTAGTGACAGCAATGAGCTTGAATCTTTTCACCAGGCTGCTACAAGACT TGGAATCACATCTTCAAGAGCAGCTCTTACTGAAAGAAGAGCTCTCAAGA AACTCATAGAAAGGGCTAGAACTGAGGAAGACAAGCGGAAGGAATCAATT GTTGCATATCTTTTACATCTTATGAGGAAATACTCCAAGTTATTTAGAAG TGAGTTCTCGGATGACAATGATTCTCAGGGTTCTTCACCTTGTTCTCCCA CTGTTCAGGGATCTATTGAGGATAGTGTTCCTGGTAGTCACTCACAAGCC TTTGACAGACAGATTTCAAAACTCAGTTGTTTTAATTTCAAACCAAATAA TAGTAGCAAGTCAGGGCTGATGCCTCTTCCACCTGAAGAGTTAAGGTGTC CAATATCTCTGCAACTTATGTATGATCCTGTTATCATTGCTTCTGGGCAA ACATATGAAAGGGTTTGTATAGAGAAATGGTTCAGTGATGGGCACAACAA CTGCCCAAAGACCCAACAGAGACTTTCACATCTTTGTTTGACTCCTAATT ACTGTGTTAAGGGCCTTGTTGCTAGTTGGTGTGAACAAAATGGAGTTCCT ATTCCTGAAGGCCCTCCTGAATCCCTTGATCTTAACTACTGGGGGTTGGT ATTATCAGAGTCTGAATCTACAAATTCAAAATCTGTAAATAGTGTCAGCT CTTGCAAGTTGAAGGGTGTCCAAGTGGTTCCTTTGGAAGAGAGTGGTATC TCAGAGGAATCTGTGGAAAATGGAACTGAAAGTGTGTCTGTACAAGGGGA AGACACTGAGCAGTATTTTAGTTTTCTGAAAGTCCTGACTGAGGAGAACA ATTGGAGGAGGCAATGTGAAGTGGTAGAACAGTTAAGGCTGTTGCTGAGG GATGATGAGGAAGCTAGGATTTTTATGGGGGCTAATGGGTTTGTTGAAGC ACTTTTGCAGTTTTTGCATTCAGCTGTGCGTGAAGGTAGTTTGATGGCTC TGGAAAGTGGAGCAATGGCTCTCTTCAACTTGGCTGTGAATAATAACAGG TATgctttatatttgtattttatttaatcatcaAGTAAAACGCTTTTCAA ATGtgattacaaaatcaaaacaGTTGCCGGTATTATTTGAGAAGCTTAAC CTTGCGATTTAGCCAAAGCCATTATGATCAAAACTGATCACTGAGATTTG CATAGTGCAAGTGGATGTGAAAAATTGATCACTGCCCACATTAATTACAT TTCTACAAGTTGATGACATACACAATTTCTTCAGTATTTAGACTCTGATT CTTTATTGgcatatttaaaatagaaagaaaatgattttgttcGTTCAGTT AATATGTTCCCAATTAAATGTGGCTGAAGTTTACCAATATGGTATATTGT TAATGTTTCTAAATTCacatagtttttattatttttaaccttAGTACACA TTTCTAACTTGAACTTGATCTTCTTTACTTTTCAACAGAAATAAGGAAAT TATGTTATCAGCTGGAGTATTATCGTTATTGGAGGAAATGATTTCAAAAA CTAGTTCTTATGGTTGTACAACTGCTCTTTATTTGAATCTCTCTTGCCTT GAAGAAGCCAAGCCTATGATTGGCATGAGTCAGGCTGTCCAGTTCCTTAT CCAACTTCTTCAATCTGACGCTGATGTTCAATGCAAGCAAGATTCTCTCC ATGCTCTCTATAATCTTTCTACTGTGCCTTCCAATATTCCGTACCTCCTT TCATCTGGCATCACTAGTGGTTTACAATCCCTTCTTGTAGGCGAGGGTGA TTGCATGTGGATAGAAAAAAGCATAGCTGTTTTGATAAATTTAGCTACTT CAGAAGTTGGTAGGGAGGAAATTTTATCTACACCTGGACTCATTAGTGCA TTGGCTTCGATATTGGACACTGGTGAGCTCTTAGAACAGGAGCAAGCTGT GTGTTGCCTCCTAATTTTGTGCAATAGAAGTGAGACTTGTAGTGAGATGG TACTGCAAGAAGGGGTTATACCAGCATTGGTTTCAATATCAGTGAACGGG ACCCCAAGAGGAAGAGAAAAAGCTCAGAAACTCTTGATGCTGTTCCGAGA GCAGCGAAGGGACCAATCACCAATTAAGACACATGAGAGCCCACCTGAAA CCAGTGATTTGTCTATGCCTCCTGCTGAGATGCAACCGCTATGCAAGTCG ATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCCTGAAACCAGTGATTTGTCTATGCCGCCGGCTGAAATG CAACCGCTATGCAAGTCGATTTCAAGAAGAAAGTCTGGGAAGACTTTCAA CTTTTTCTGGAAAAGCAAGAGCTATTCTGTTTACCAGTGTTAA
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Coding sequence (CDS) from alignment at Scaffold136490-KQ483418.1:608354..612246+

>rna-KK1_025163_Cc_Asha_v1.0 ID=rna-KK1_025163_Cc_Asha_v1.0; Name=rna-KK1_025163; organism=Cajanus cajan; type=CDS; length=4674bp; location=Sequence derived from: Scaffold136490-KQ483418.1:608354..612246+ (Cajanus cajan
ATGGATGTTGCTGAGGTTGAAGAGAATCTATTTGCCGTAAGTGATGCCAA
GATGGATGTTGCTGAGGTTGAAGAGAATCTATTTGCCGTAAGTGATGCCA
AGTTACATGGACAAATGTGCAAGACCCTTTCTATAATATACTGCAAAGTA
TTGTCTGTATTTCCTTCTTTAGAAGCTGCTAGGCCTAGGAGTAAATCTGG
TATTCAGGCATTATGTTCATTGCATGTAGCCTTAGAGAAAGTCAAGAATA
TTCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACTTGTTACATGGACAA
ATGTGCAAGACCCTTTCTATAATATACTGCAAAGTATTGTCTGTATTTCC
TTCTTTAGAAGCTGCTAGGCCTAGGAGTAAATCTGGTATTCAGGCATTAT
GTTCATTGCATGTAGCCTTAGAGAAAGTCAAGAATATTCTTCAGCACTGC
TCAGAGTGTAGTAAACTTTACTTGGCTATAACTGGAGATTCTGTCCTTCT
AAAATTTGAGAAGGCTAAATGTGCTCTTGAAGATAGTCTTAGACGGGTGG
AAGATATTGTTCCACAATCTATAGGTTGTCAGGCTATAACTGGAGATTCT
GTCCTTCTAAAATTTGAGAAGGCTAAATGTGCTCTTGAAGATAGTCTTAG
ACGGGTGGAAGATATTGTTCCACAATCTATAGGTTGTCAGGTTCAGGAGA
TTGTGAATGAATTTGCGACTATAGAATTTGCACTTGACCCATCAGAAAAG
CAAGTTGGTGATGATTTAATAGCATTGCTCCAACAGGGAAGAAAGTTTAG
TGACTCTAGTGACAGCAATGAGCTTGAATCTTTTCACCAGGCTGCTACAA
GACTTGGAATCACATCTTCAAGAGCAGCTCTTACTGAAAGAAGAGCTCTC
AAGAAACTCATAGAAAGGGCTAGAACTGAGGAAGACAAGCGGAAGGAATC
AATTGTTGCATATCTTTTACATCTTATGAGGAAATACTCCAAGTTATTTA
GAAGTGAGTTCTCGGATGACAATGATTCTCAGGGTTCTTCACCTTGTTCT
CCCACTGTTCAGGGATCTATTGAGGATAGTGTTCCTGGTAGTCACTCACA
AGCCTTTGACAGACAGATTTCAAAACTCAGTTGTTTTAATTTCAAACCAA
ATAATAGTAGCAAGTCAGGGCTGATGCCTCTTCCACCTGAAGAGTTAAGG
TGTCCAATATCTCTGCAACTTATGTATGATCCTGTTATCATTGCTTCTGG
GCAAACATATGAAAGGGTTTGTATAGAGAAATGGTTCAGTGATGGGCACA
ACAACTGCCCAAAGACCCAACAGAGACTTTCACATCTTTGTTTGACTCCT
AATTACTGTGTTAAGGGCCTTGTTGCTAGTTGGTGTGAACAAAATGGAGT
TCCTATTCCTGAAGGCCCTCCTGAATCCCTTGATCTTAACTACTGGGGGT
TGGTATTATCAGAGTCTGAATCTACAAATTCAAAATCTGTAAATAGTGTC
AGCTCTTGCAAGTTGAAGGGTGTCCAAGTGGTTCCTTTGGAAGAGAGTGG
TATCTCAGAGGAATCTGTGGAAAATGGAACTGAAAGTGTGTCTGTACAAG
GGGAAGACACTGAGCAGTATTTTAGTTTTCTGAAAGTCCTGACTGAGGAG
AACAATTGGAGGAGGCAATGTGAAGTGGTAGAACAGTTAAGGCTGTTGCT
GAGGGATGATGAGGAAGCTAGGATTTTTATGGGGGCTAATGGGTTTGTTG
AAGCACTTTTGCAGTTTTTGCATTCAGCTGTGCGTGAAGGTAGTTTGATG
GCTCTGGAAAGTGGAGCAATGGCTCTCTTCAACTTGGCTGTGAATAATAA
CAGGTTCAGGAGATTGTGAATGAATTTGCGACTATAGAATTTGCACTTGA
CCCATCAGAAAAGCAAGTTGGTGATGATTTAATAGCATTGCTCCAACAGG
GAAGAAAGTTTAGTGACTCTAGTGACAGCAATGAGCTTGAATCTTTTCAC
CAGGCTGCTACAAGACTTGGAATCACATCTTCAAGAGCAGCTCTTACTGA
AAGAAGAGCTCTCAAGAAACTCATAGAAAGGGCTAGAACTGAGGAAGACA
AGCGGAAGGAATCAATTGTTGCATATCTTTTACATCTTATGAGGAAATAC
TCCAAGTTATTTAGAAGTGAGTTCTCGGATGACAATGATTCTCAGGGTTC
TTCACCTTGTTCTCCCACTGTTCAGGGATCTATTGAGGATAGTGTTCCTG
GTAGTCACTCACAAGCCTTTGACAGACAGATTTCAAAACTCAGTTGTTTT
AATTTCAAACCAAATAATAGTAGCAAGTCAGGGCTGATGCCTCTTCCACC
TGAAGAGTTAAGGTGTCCAATATCTCTGCAACTTATGTATGATCCTGTTA
TCATTGCTTCTGGGCAAACATATGAAAGGGTTTGTATAGAGAAATGGTTC
AGTGATGGGCACAACAACTGCCCAAAGACCCAACAGAGACTTTCACATCT
TTGTTTGACTCCTAATTACTGTGTTAAGGGCCTTGTTGCTAGTTGGTGTG
AACAAAATGGAGTTCCTATTCCTGAAGGCCCTCCTGAATCCCTTGATCTT
AACTACTGGGGGTTGGTATTATCAGAGTCTGAATCTACAAATTCAAAATC
TGTAAATAGTGTCAGCTCTTGCAAGTTGAAGGGTGTCCAAGTGGTTCCTT
TGGAAGAGAGTGGTATCTCAGAGGAATCTGTGGAAAATGGAACTGAAAGT
GTGTCTGTACAAGGGGAAGACACTGAGCAGTATTTTAGTTTTCTGAAAGT
CCTGACTGAGGAGAACAATTGGAGGAGGCAATGTGAAGTGGTAGAACAGT
TAAGGCTGTTGCTGAGGGATGATGAGGAAGCTAGGATTTTTATGGGGGCT
AATGGGTTTGTTGAAGCACTTTTGCAGTTTTTGCATTCAGCTGTGCGTGA
AGGTAGTTTGATGGCTCTGGAAAGTGGAGCAATGGCTCTCTTCAACTTGG
CTGTGAATAATAACAGAAATAAGGAAATTATGTTATCAGCTGGAGTATTA
TCGTTATTGGAGGAAATGATTTCAAAAACTAGTTCTTATGGTTGTACAAC
TGCTCTTTATTTGAATCTCTCTTGCCTTGAAGAAGCCAAGCCTATGATTG
GCATGAGTCAGGCTGTCCAGTTCCTTATCCAACTTCTTCAATCTGACGCT
GATGTTCAATGCAAGCAAGATTCTCTCCATGCTCTCTATAATCTTTCTAC
TGTGCCTTCCAATATTCCGTACCTCCTTTCATCTGGCATCACTAGTGGTT
TACAATCCCTTCTTGTAGGCGAGGGTGATTGCATGTGGATAGAAAAAAGC
ATAGCTGTTTTGATAAATTTAGCTACTTCAGAAGTTGGTAGGGAGGAAAT
TTTATCTACACCTGGACTCATTAGTGCATTGGCTTCGATATTGGACACTG
GTGAGCTCTTAGAACAGGAGCAAGCTGTGTGTTGCCTCCTAATTTTGTGC
AATAGAAGTGAGACTTGTAGTGAGATGGTACTGCAAGAAGGGGTTATACC
AGCATTGGTTTCAATATCAGTGAACGGGACCCCAAGAGGAAGAGAAAAAG
CTCAGAAACTCTTGATGCTGTTCCGAGAGCAGCGAAGGGACCAATCACCA
ATTAAGACACATGAGAGCCCACCTGAAACCAGTGATTTGTCTATGCCTCC
TGCTGAGATGCAACCGCTATGCAAAAATAAGGAAATTATGTTATCAGCTG
GAGTATTATCGTTATTGGAGGAAATGATTTCAAAAACTAGTTCTTATGGT
TGTACAACTGCTCTTTATTTGAATCTCTCTTGCCTTGAAGAAGCCAAGCC
TATGATTGGCATGAGTCAGGCTGTCCAGTTCCTTATCCAACTTCTTCAAT
CTGACGCTGATGTTCAATGCAAGCAAGATTCTCTCCATGCTCTCTATAAT
CTTTCTACTGTGCCTTCCAATATTCCGTACCTCCTTTCATCTGGCATCAC
TAGTGGTTTACAATCCCTTCTTGTAGGCGAGGGTGATTGCATGTGGATAG
AAAAAAGCATAGCTGTTTTGATAAATTTAGCTACTTCAGAAGTTGGTAGG
GAGGAAATTTTATCTACACCTGGACTCATTAGTGCATTGGCTTCGATATT
GGACACTGGTGAGCTCTTAGAACAGGAGCAAGCTGTGTGTTGCCTCCTAA
TTTTGTGCAATAGAAGTGAGACTTGTAGTGAGATGGTACTGCAAGAAGGG
GTTATACCAGCATTGGTTTCAATATCAGTGAACGGGACCCCAAGAGGAAG
AGAAAAAGCTCAGAAACTCTTGATGCTGTTCCGAGAGCAGCGAAGGGACC
AATCACCAATTAAGACACATGAGAGCCCACCTGAAACCAGTGATTTGTCT
ATGCCTCCTGCTGAGATGCAACCGCTATGCAATGATTTGTCTATGCCGCC
GGCTGAAATGCAACCGCTATGCAAGTCGATTTCAAGAAGAAAGTCTGGGA
AGACTTTCAACTTTTTCTGGAAAAGCAAGAGCTATTCTGTTTACCAGTGT
TAATGATTTGTCTATGCCGCCGGCTGAAATGCAACCGCTATGCAAGTCGA
TTTCAAGAAGAAAGTCTGGGAAGACTTTCAACTTTTTCTGGAAAAGCAAG
AGCTATTCTGTTTACCAGTGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR000225Armadillo
IPR013083Znf_RING/FYVE/PHD
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination