Vigun08g147000.1

Transcript Overview
NameVigun08g147000.1
Unique NameVigun08g147000.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1232
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:31982068..31983709 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL043Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL165Pisum sativum Cameor genome v1aPisum sativum
psvuL473Pisum sativum Cameor genome v1aPisum sativum
pvvuL059Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL732Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL706Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL135Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL139Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL548Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0050Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0782Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0428Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0636Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0856Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1203Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL486Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL703Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR574Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR580Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL088Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL082Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL090Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL266Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL271Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL447Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL377Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL575Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR378Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR396Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL128Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL133Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL516Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL413Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL598Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL140Cicer arietinum
carvuL141Cicer arietinum
carvuL516Cicer arietinum
ccavuL061Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL423Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR676Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR682Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR673Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR701Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR731Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL287Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL378Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL301Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL400Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL057Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL618Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR437Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_23864Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_005648Cajanus cajan Asha genome v1.0Cajanus cajan
Va07G014540.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan07g073200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
PvulFLAVERTChr01.1452Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg33999.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-KK1_020142Cajanus cajan Asha genome v1.0Cajanus cajan
PvulFLAVERTChr08.1001504Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vum_03G00712.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.03G064100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.008G234300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va03G077780.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_012713073.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.001G231500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
XM_058890528.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_16136Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat02G0135800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_022778994.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr08.1372Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.04G263100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_014648837.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigan.04G365900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_04G02938.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_00422.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
evm.model.Chr01.2046Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_21311Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_12086.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
LR48_mrnaVigan03g259200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.03G091900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g216700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun01g216700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun08g147000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g147000Vigun08g147000_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g147000.1Vigun08g147000.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g147000.1_Vu_IT97K-499-35_v1.1Vigun08g147000.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g147000.1.v1.1.five_prime_UTR.1Vigun08g147000.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g147000.1.v1.1.CDS.1Vigun08g147000.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g147000.1.v1.1.CDS.2Vigun08g147000.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g147000.1.v1.1.CDS.3Vigun08g147000.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g147000.1.v1.1.CDS.4Vigun08g147000.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g147000.1.v1.1.CDS.5Vigun08g147000.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g147000.1.v1.1.three_prime_UTR.1Vigun08g147000.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: BH086_ARATH (Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=BHLH86 PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.551e-49
Identity = 95/144 (65.97%), Postives = 111/144 (77.08%), Query Frame = 1 
Query:  382 WLYSEPN-VHXXXXXXXXXXXXVLRKRSFMGESMQAANAKKPCT-IXXXXXXXXXXXXXDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVRQAIDAILSSQR 807
            WLYS    V+  S +ES + +L   KR F GE+ Q +  KKP +    K     ++  KDPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YVKFLQ+QVKVLAADEFWP QGGKAPDISQV++AIDAILSS +
Sbjct:  153 WLYSGSTIVNIGSRHESTSPKLAGNKRPFTGENTQLS--KKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSSQ 294
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: BH083_ARATH (Transcription factor bHLH83 OS=Arabidopsis thaliana OX=3702 GN=BHLH83 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.635e-49
Identity = 95/141 (67.38%), Postives = 107/141 (75.89%), Query Frame = 1 
Query:  382 WLYSEPNV-HXXXXXXXXXXXXVLRKRSFMGESMQAANAKKPCTIXXXXXXXXXXXXXDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVRQAIDAILSS 801
            WLYS+  V  + S NES + +    KRS  GES Q +  K    +  K     ++  KDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEKAISYVKFLQ+QVKVLA DEFWP QGGKAPDISQV+ AIDAILSS
Sbjct:  147 WLYSDSTVVTTGSRNESLSPKSAGNKRSHTGESTQPS-KKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFWPAQGGKAPDISQVKDAIDAILSS 286
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: BH084_ARATH (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.768e-23
Identity = 41/60 (68.33%), Postives = 54/60 (90.00%), Query Frame = 1 
Query:  553 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFW 732
            DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct:  246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: BH085_ARATH (Transcription factor bHLH85 OS=Arabidopsis thaliana OX=3702 GN=BHLH85 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.029e-22
Identity = 41/60 (68.33%), Postives = 54/60 (90.00%), Query Frame = 1 
Query:  553 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFW 732
            DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct:  275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 334
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: BH054_ARATH (Transcription factor bHLH54 OS=Arabidopsis thaliana OX=3702 GN=BHLH54 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.056e-21
Identity = 40/60 (66.67%), Postives = 53/60 (88.33%), Query Frame = 1 
Query:  553 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFW 732
            DPQS+ A+ RRE+I+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct:  176 DPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 235
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: BH139_ARATH (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.683e-21
Identity = 39/60 (65.00%), Postives = 52/60 (86.67%), Query Frame = 1 
Query:  553 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFW 732
            DPQS+ A+ RRERI++RLK LQ LVPNG+KVD+ TMLE A+ YVKFLQLQ+K+L++++ W
Sbjct:  141 DPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLW 200
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana OX=3702 GN=BHLH66 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.680e-18
Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 1 
Query:  553 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVRQA 780
            DP S+A + RRERI+ER+K LQELVPNG+K D  +ML++ I YVKFLQLQVKVL+        GG A   SQ+ +A
Sbjct:  147 DPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAASVSSQISEA 218
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana OX=3702 GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.162e-18
Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = 1 
Query:  553 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVRQ 777
            DP S+A + RRERI+ER+K LQELVPNG+K D  +ML++ I YVKFLQLQVKVL+        GG A   SQ+ +
Sbjct:  139 DPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAASASSQISE 209
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: LAX1_ORYSJ (Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.161e-16
Identity = 35/56 (62.50%), Postives = 45/56 (80.36%), Query Frame = 1 
Query:  553 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAA 720
            DPQSVAA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +  A
Sbjct:   43 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQA 98
[Close]
BLAST of Vigun08g147000.1 vs. DB:Swiss
Match: LF_ORYSJ (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.139e-15
Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  553 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 714
            DPQ+VAA+ RRER+SERL++LQ LVP GSK+D  TML++A SY+KFL+ Q++ L
Sbjct:  306 DPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 359
The following BLAST results are available for this feature:
BLAST of Vigun08g147000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
BH086_ARATH2.551e-4965.97Putative transcription factor bHLH086 OS=Arabidops... [more]
BH083_ARATH5.635e-4967.38Transcription factor bHLH83 OS=Arabidopsis thalian... [more]
BH084_ARATH7.768e-2368.33Transcription factor bHLH84 OS=Arabidopsis thalian... [more]
BH085_ARATH1.029e-2268.33Transcription factor bHLH85 OS=Arabidopsis thalian... [more]
BH054_ARATH1.056e-2166.67Transcription factor bHLH54 OS=Arabidopsis thalian... [more]
BH139_ARATH2.683e-2165.00Transcription factor bHLH139 OS=Arabidopsis thalia... [more]
BH066_ARATH2.680e-1856.58Transcription factor bHLH66 OS=Arabidopsis thalian... [more]
BH069_ARATH6.162e-1856.00Transcription factor bHLH69 OS=Arabidopsis thalian... [more]
LAX1_ORYSJ4.161e-1662.50Transcription factor LAX PANICLE 1 OS=Oryza sativa... [more]
LF_ORYSJ1.139e-1562.96Transcription factor LATE FLOWERING OS=Oryza sativ... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 188..237
e-value: 1.0E-11
score: 54.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 191..232
e-value: 5.1E-8
score: 32.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 182..231
score: 15.281
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 184..236
e-value: 8.51171E-12
score: 57.2239
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 172..232
e-value: 1.0E-10
score: 43.2
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 180..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..188

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g147000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g147000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g147000.1; organism=Vigna unguiculata; type=mRNA; length=1232bp
AAATATTTCAGTTCCAATTAATTGGTTTTTGAAGGCTATATAGAGAGGTC
TTCTTCACTGTTTGTGACATGCTCATTATTCACCTTAACAAACCTTAGCT
TCTGCATTTGGGTGCGTCTTTTACTTCCCTAATGCCACTCTCTTTGACAT
CTCATGGGGTCAATGAGTACCAAAAATGTGGGGTTCAAGAGGAAGATAAC
TCACAAACTACTACTAATGGATTCAGCAATGATTCAGCTTCAGCTTCAGC
CGTAACTCAATCTCTGATTAACTTCAAAGCCAACGACTTCAGCAACCTCA
TGAAAGGTAGTGATTCTTTTCTCAGCTTTCAGCAGAGCTGGTTGTTTTCC
AAATTGCATGAAGGTTGTGACCAATGGAACCATGTCAGTCCCAAAAACAC
CACAGACATGCGCCTGGTTCAAAATTTCAGCTGCTCTGAAACTGCTACTT
GCTATAGCTCCATATTCAGTGGTGCAAAAGAGAAGAAACATGGTGAAAGT
TCATCTTCTGGGTGGCTATATTCAGAACCAAATGTCCATAGTTCTAGCCT
GAATGAGTCAGCAGCAGAAGAATTGGTCTTGAGAAAGCGATCTTTTATGG
GAGAGAGCATGCAAGCTGCCAATGCCAAGAAGCCATGCACAATTGCAAGT
AAAGCAACAAAACCAAAGTCAAGCCCTTCTAAGGATCCTCAAAGTGTTGC
TGCCAAGAATAGAAGAGAGAGAATAAGTGAACGGCTTAAGATACTCCAAG
AACTGGTCCCCAACGGCTCCAAGGTTGATTTGGTGACCATGTTGGAGAAA
GCAATTAGTTATGTGAAGTTTCTTCAGTTGCAAGTGAAGGTGTTGGCAGC
AGATGAATTTTGGCCTGTACAAGGTGGAAAAGCCCCTGACATTTCTCAAG
TAAGACAAGCCATTGATGCCATTCTTTCATCTCAAAGATGAATTTTAGGT
CATGGATTCAATGAATAAGTGTCATCATAATTAAAACACAACATTTCAGA
ACAAGAATTAGTTCTGGAAGTTGGTCGTTCTGAAGGACGTTTTAGTATTT
CAGAATACATGACATTTCTAATTTCTAAACTTCTAAATCAAGATCTAGCA
GAAAAAAAAGAAAAACATATGTCATAGTGTTTCAATCACAGACTGTTGTA
CTTTTCTCTGTATTCCAGGGATGATGGAAGTGTTTTTGATAAATATCTGA
CTACACTACCTTCTGCATTATCATGGAAAAAG
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protein sequence of Vigun08g147000.1_Vu_IT97K-499-35_v1.1

>Vigun08g147000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g147000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g147000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=270bp
MPLSLTSHGVNEYQKCGVQEEDNSQTTTNGFSNDSASASAVTQSLINFKA
NDFSNLMKGSDSFLSFQQSWLFSKLHEGCDQWNHVSPKNTTDMRLVQNFS
CSETATCYSSIFSGAKEKKHGESSSSGWLYSEPNVHSSSLNESAAEELVL
RKRSFMGESMQAANAKKPCTIASKATKPKSSPSKDPQSVAAKNRRERISE
RLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGK
APDISQVRQAIDAILSSQR*
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mRNA from alignment at Vu08:31982068..31983709+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g147000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g147000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g147000.1; organism=Vigna unguiculata; type=mRNA; length=1642bp; location=Sequence derived from: Vu08:31982068..31983709+ (Vigna unguiculata
AAATATTTCAGTTCCAATTAATTGGTTTTTGAAGGCTATATAGAGAGGTC
TTCTTCACTGTTTGTGACATGCTCATTATTCACCTTAACAAACCTTAGCT
TCTGCATTTGGGTGCGTCTTTTACTTCCCTAATGCCACTCTCTTTGACAT
CTCATGGGGTCAATGAGTACCAAAAATGTGGGGTTCAAGAGGAAGATAAC
TCACAAACTACTACTAATGGATTCAGCAATGATTCAGCTTCAGCTTCAGC
CGTAACTCAATCTCTGATTAACTTCAAAGCCAACGACTTCAGCAACCTCA
TGAAAGGTAGTGATTCTTTTCTCAGCTTTCAGCAGAGCTGGTTGTTTTCC
AAATTGCATGAAGGTTGTGACCAATGGAACCATGTCAGTCCCAAAAACAC
CACAGACATGCGCCTGGTTCAAAATTTCAGCTGCTCTGAAACTGCTACTT
GCTATAGCTCCATATTCAGTGGTGCAAAAGAGAAGAAACATGGTGAAAGT
TCATCTTCTGGGTGGCTATATTCAGAACCAAATGTCCATAGTTCTAGCCT
GAATGAGTCAGCAGCAGAAGAATTGGTCTTGAGAAAGCGATCTTTTATGG
TATTGTTGGTTTCTTAATCAATCATAACTTAATTTTTTTGTGCATTAATA
GAAGATTGATGTGTGAGATTTGTGTCTATAGGGAGAGAGCATGCAAGCTG
CCAATGCCAAGAAGCCATGCACAATTGCAAGTAAAGCAACAAAACCAAAG
TCAAGCCCTTCTAAGGATCCTCAAAGTGTTGCTGCCAAGGTTTGCTTAAT
TGCTTCAAACCTAAGATAAATTATGTCGCATGTGTACCAAGTTTTTGATT
GCAAAGTAAGAAAACTTAAAATACGAGATTCAATGCTGATAGAATGTTTG
TATGAGTGTATCACAGAATAGAAGAGAGAGAATAAGTGAACGGCTTAAGA
TACTCCAAGAACTGGTCCCCAACGGCTCCAAGGTAGGTTTTTCAGACTGG
TTTGAAATGCTGCATTCTTTTGGATTTACTTTACAAGAATAACTTATGAT
TTAACTCCATTGATGAATTTTGCAGGTTGATTTGGTGACCATGTTGGAGA
AAGCAATTAGTTATGTGAAGTTTCTTCAGTTGCAAGTGAAGGTGGGAGTA
GCACACAATACAATGCACTAATTTTTCCTTGTTCTTTTGTTATGCATGTT
TTTGGTCATTCATGGAATCTCACCTGTTCTGTGAAACATGTTTGTGAAGG
TGTTGGCAGCAGATGAATTTTGGCCTGTACAAGGTGGAAAAGCCCCTGAC
ATTTCTCAAGTAAGACAAGCCATTGATGCCATTCTTTCATCTCAAAGATG
AATTTTAGGTCATGGATTCAATGAATAAGTGTCATCATAATTAAAACACA
ACATTTCAGAACAAGAATTAGTTCTGGAAGTTGGTCGTTCTGAAGGACGT
TTTAGTATTTCAGAATACATGACATTTCTAATTTCTAAACTTCTAAATCA
AGATCTAGCAGAAAAAAAAGAAAAACATATGTCATAGTGTTTCAATCACA
GACTGTTGTACTTTTCTCTGTATTCCAGGGATGATGGAAGTGTTTTTGAT
AAATATCTGACTACACTACCTTCTGCATTATCATGGAAAAAG
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Coding sequence (CDS) from alignment at Vu08:31982068..31983709+

>Vigun08g147000.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g147000.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g147000.1; organism=Vigna unguiculata; type=CDS; length=810bp; location=Sequence derived from: Vu08:31982068..31983709+ (Vigna unguiculata
ATGCCACTCTCTTTGACATCTCATGGGGTCAATGAGTACCAAAAATGTGG
GGTTCAAGAGGAAGATAACTCACAAACTACTACTAATGGATTCAGCAATG
ATTCAGCTTCAGCTTCAGCCGTAACTCAATCTCTGATTAACTTCAAAGCC
AACGACTTCAGCAACCTCATGAAAGGTAGTGATTCTTTTCTCAGCTTTCA
GCAGAGCTGGTTGTTTTCCAAATTGCATGAAGGTTGTGACCAATGGAACC
ATGTCAGTCCCAAAAACACCACAGACATGCGCCTGGTTCAAAATTTCAGC
TGCTCTGAAACTGCTACTTGCTATAGCTCCATATTCAGTGGTGCAAAAGA
GAAGAAACATGGTGAAAGTTCATCTTCTGGGTGGCTATATTCAGAACCAA
ATGTCCATAGTTCTAGCCTGAATGAGTCAGCAGCAGAAGAATTGGTCTTG
AGAAAGCGATCTTTTATGGGAGAGAGCATGCAAGCTGCCAATGCCAAGAA
GCCATGCACAATTGCAAGTAAAGCAACAAAACCAAAGTCAAGCCCTTCTA
AGGATCCTCAAAGTGTTGCTGCCAAGAATAGAAGAGAGAGAATAAGTGAA
CGGCTTAAGATACTCCAAGAACTGGTCCCCAACGGCTCCAAGGTTGATTT
GGTGACCATGTTGGAGAAAGCAATTAGTTATGTGAAGTTTCTTCAGTTGC
AAGTGAAGGTGTTGGCAGCAGATGAATTTTGGCCTGTACAAGGTGGAAAA
GCCCCTGACATTTCTCAAGTAAGACAAGCCATTGATGCCATTCTTTCATC
TCAAAGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity