Vigun09g271000.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.074e-35 Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 28 FGAKHILRRSNLAAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLHR 288 GAK IL RS AA+ + PKG+ AVYVGE +KKR+++P+S LNQPSFQ LLS +EEEFGF+HPMGGLTIPC +D F N+TS R Sbjct: 8 LGAKKILSRSTTAASAA---PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRFQR 91
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 4.104e-34 Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 28 FGAKHILRRSNLAAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLH 285 GAK IL RS A + + PKG+ AVYVGE +KKR+++PVS LNQPSFQ LLS +EEEFGF+HPMGGLTIPC +D F N+TS L Sbjct: 8 LGAKKILSRSTGAGSAA---PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 90
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 5.339e-34 Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1 Query: 34 AKHILRRSNLAAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLH 285 AK IL RS AAA S PKG+ AVYVGE +KKR+++P+S LNQPSFQ LLS +EEEFGF+HPMGGLTIPC +D F N+TS LH Sbjct: 10 AKKILSRS--AAAVSAP-PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 7.155e-34 Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 28 FGAKHILRRSNLAAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLH 285 GAK IL RS +AA PKG+ AVYVGE +KKR+++P+S L+QPSFQ LLS +EEEFGF+HPMGGLTIPC +D F N+TS L Sbjct: 8 LGAKKILSRSTASAA-----PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 88
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 8.742e-34 Identity = 53/86 (61.63%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 28 FGAKHILRRSNLAAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLH 285 GAK IL RS A + + PKG+ AVYVGE +KKR+++P+S LNQPSFQ LLS +E+EFGF+HPMGGLTIPC +D F N+TS L Sbjct: 8 LGAKKILSRSTAAVSAA---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.128e-33 Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 4 MAIRFPTSFGAKHILRRSNLAAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGL 282 M R P G + L N A++ LD PKGY AVYVGE KRFVIPVS LNQP FQ+LLS AEEEFG++HPMGGLTIPC++D+F +ITS L Sbjct: 1 MGFRLP---GIRKTLSARNEASSKVLDAPKGYLAVYVGEN-MKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.426e-33 Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1 Query: 28 FGAKHILRRSNLAAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLH 285 GAK IL RS A + + PKG+ AVYVGE +KKR+++P+S L+QPSFQ LLS +EEEFGF HPMGGLTIPC +D F N+TS L Sbjct: 8 LGAKKILSRSTAAGSAA---PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMGGLTIPCPEDTFINVTSRLQ 90
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.951e-32 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 1 Query: 67 AATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLH 285 A+ + D PKGY AVYVGE + KRFVIPVS LNQPSFQ+LLS AEEEFG++HPMGGLTIPC++D+F ITS L+ Sbjct: 11 ASKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.432e-31 Identity = 54/94 (57.45%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 4 MAIRFPTSFGAKHILRRSNLAAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLH 285 M R P G + +N A++ ++DV KGY AVYVGE + +RFVIPVS LN+PSFQ+LLS AEEEFG++HP GGLTIPC++D+F +ITS L+ Sbjct: 1 MGFRLP---GIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90
BLAST of Vigun09g271000.1 vs. DB:Swiss
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.252e-31 Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 1 Query: 43 ILRRSNL----AAATSLDVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLHRL 291 I+RR++ AA+ +DVPKGY AVYVG+ + +RF IPVS LN+PSFQELLS AEEEFG++HPMGGLTIPC ++ F N+T+ L+ L Sbjct: 8 IVRRTSFYTTQAASKRVDVPKGYAAVYVGD-KMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLNEL 93 The following BLAST results are available for this feature:
BLAST of Vigun09g271000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g271000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g271000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g271000.1; organism=Vigna unguiculata; type=mRNA; length=294bpback to top protein sequence of Vigun09g271000.1_Vu_IT97K-499-35_v1.1 >Vigun09g271000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g271000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g271000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=98bpback to top mRNA from alignment at Vu09:43338219..43338512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g271000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g271000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g271000.1; organism=Vigna unguiculata; type=mRNA; length=294bp; location=Sequence derived from: Vu09:43338219..43338512- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:43338219..43338512- >Vigun09g271000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g271000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g271000.1; organism=Vigna unguiculata; type=CDS; length=294bp; location=Sequence derived from: Vu09:43338219..43338512- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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