Vigun01g027700.1

Transcript Overview
NameVigun01g027700.1
Unique NameVigun01g027700.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length972
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:3304948..3305919 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR004Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuL133Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL468Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuL0273Cajanus cajan Asha genome v1.0Cajanus cajan
asvuL090Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL571Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR026Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR040Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuL322Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuvuaR001Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR007Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
avjvuL042Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL497Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ccavuL074Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL353Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR048Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR053Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR016Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR068Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL447Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL490Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL467Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL501Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL117Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL399Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR004Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat04G0483500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.005G025800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014645127.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr01.229Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.07G232300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.07G145300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-KK1_032443Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_24932.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
LR48_mrnaVigan05g003900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
PvulFLAVERTChr05.1000168Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058889691.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va05G002510.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr11.114Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vum_07G01780.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g027700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun11g011200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun11g011200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g027700Vigun01g027700_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g027700.1Vigun01g027700.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g027700.1_Vu_IT97K-499-35_v1.1Vigun01g027700.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g027700.1.v1.1.CDS.1Vigun01g027700.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


Homology
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: PUB38_ARATH (U-box domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=PUB38 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.216e-9
Identity = 64/205 (31.22%), Postives = 92/205 (44.88%), Query Frame = 1
Query:  388 VGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSE------SGNCSLRTKENAVAALLNLVRYGSERVVGEVKNKVGALDGISYVQEHGSPKGKSKAVAFFKLLL-----DGGSSGEIAQDLYPVHSDSGSSR 969
            +GA   +L AL +  SD     RT  D+  A + + L + +R+ LVRLGAVP LF +V   +   R       A  VI  +A C E   A L  + V+ L   L  E          S   +EN VAAL  L  + S R  G  K +  A++ +  V+E G+ + + KA    +L+      D    GE + D   V   +GS R
Sbjct:  347 LGALQPLLHALRAAESD-----RTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASR-------ALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFAL-SHESLRFKGLAK-EARAVEVLKEVEERGTERAREKAKKILQLMRERVPEDDEEDGEGSIDWDRVIDSNGSIR 537          
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.416e-8
Identity = 88/293 (30.03%), Postives = 143/293 (48.81%), Query Frame = 1
Query:   22 IRTLVSSLTSSSDQTXXXXXXXXXXTSNEDPASRTIISXXXXXXXXXXXXYSPSHPIQDDAAATLLNLSISD-RRXXXXXXXXXXXXXHVLSRHXXXXXXXXXXXXXXTLHSLLAVVAEFRPTVGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVAALLNLVRYGSERVVGEVKNKVGALDGISYVQEHGSPKGKSKAVAFFKLL 897
            ++ L+  L SSS  T+  A   +R  +     +R +I+   A+P L + LYS    IQ DA   LLNLSI+D  + L++    +  L HVL    T     A  ++AATL S L+V+ E++  +G    I   L+ ++    SL+   KDA  A F ++++  ++T ++  GAV  L  L+          G++E A  V+A +A   E + A  +  G+  L  ++  E G  S R KENA AALL L  +  +     ++   G +  +  + + G+ +GK KA    K  
Sbjct:  423 VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLK---TGYLEEAKANSAATLFS-LSVIEEYKTEIGEAGAI-EPLVDLLGS-GSLSGK-KDAATALFNLSIHHENKTKVIEAGAVRYLVELMDP------AFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVV--ELG--SARGKENATAALLQLCTHSPKFCNNVIRE--GVIPPLVALTKSGTARGKEKAQNLLKYF 696          
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3)

HSP 1 Score: 59.6918 bits (143), Expect = 1.465e-8
Identity = 89/293 (30.38%), Postives = 145/293 (49.49%), Query Frame = 1
Query:   22 IRTLVSSLTSSSDQTXXXXXXXXXXTSNEDPASRTIISXXXXXXXXXXXXYSPSHPIQDDAAATLLNLSISD-RRXXXXXXXXXXXXXHVLSRHXXXXXXXXXXXXXXTLHSLLAVVAEFRPTVGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVAALLNLVRYGSERVVGEVKNKVGALDGISYVQEHGSPKGKSKAVAFFKLL 897
            ++ LV  L SSS  T+  A   LR  +  +  +R +I  +GA+ LL   LYS     Q++A   LLNLSI+D  +  ++    +  L HVL       +  A +++AATL S L+V+ E +  +G    I   L+ ++   +   R  KDA  A F +++++ ++  +V+ GAV  L  L+          G+++ A AV+A +A   E  +A  +  G+  L  ++  E G  S R KENA AALL L    S R    V  + GA+  +  + + G+P+ + KA A     
Sbjct:  543 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLEN----GSSEAKENSAATLFS-LSVIEENKIKIGQSGAI-GPLVDLLG--NGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDP------AAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVV--ELG--SARGKENAAAALLQL-STNSGRFCNMVLQE-GAVPPLVALSQSGTPRAREKAQALLSYF 815          
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: PUB1_MEDTR (U-box domain-containing protein 1 OS=Medicago truncatula OX=3880 GN=PUB1 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 7.263e-8
Identity = 46/180 (25.56%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  358 LAVVAEFRPTVGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVAALLNLVRYGSERVVGEVKNKVGALDGISYVQEHGSPKGKSKAVAFFKLL 897
            L+++ + +  +GA    + AL+ ++ +   + +  +DA  A F +A+Y P++ ++V+ GAV +L  L+  D     K GI +D+ AV+A +  C E  +   ++     L  +L       S++ KEN++  LL L +   E V   +     ++  +  +   GS + + KA A  +LL
Sbjct:  514 LSMIDDCKVQIGASSRAIPALVGLLKEGTIIGK--RDAATALFNLAVYNPNKLSIVKSGAVTLLVELLMDD-----KAGITDDSLAVLAVLLGCSEGLE---EIKNSKSLVPLLIDLLRFGSVKGKENSITLLLGLCKEEGELVAMRLLANPRSIPSLQSLAADGSLRARRKADALLRLL 683          
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: SL11_ORYSJ (E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL11 PE=1 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 3.011e-7
Identity = 67/235 (28.51%), Postives = 119/235 (50.64%), Query Frame = 1
Query:  193 QDDAAATLLNLSI-SDRRXXXXXXXXXXXXXHVLSRHXXXXXXXXXXXXXXTLHSLLAVVAEFRPTVGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVAALLNLVRYGSERVVGEVK-NKVGALDGISYVQEHGSPKGKSKAVAFFK 891
            Q+ A   LLNLSI  D +  +     +PS+ HVL       +  A ++AAATL SL +V+ E++ T+G    I  AL+ ++ +     R  KDA  A F + +Y+ ++   +R G VP++ GLV           ++++A A+++ +++  E + A      V  L  M+    G+ + R +ENA A +L+L   G   +V   +  + G +  +  +  +G+ +GK KAV   +
Sbjct:  426 QEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKN----GSMEARENAAATLFSL-SVIDEYKVTIGGMGAI-PALVVLLGE--GSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTG-----ALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMI----GSGTPRNRENAAAVMLHLCS-GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLE 642          
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica OX=39946 GN=SPL11 PE=1 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 3.011e-7
Identity = 67/235 (28.51%), Postives = 119/235 (50.64%), Query Frame = 1
Query:  193 QDDAAATLLNLSI-SDRRXXXXXXXXXXXXXHVLSRHXXXXXXXXXXXXXXTLHSLLAVVAEFRPTVGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVAALLNLVRYGSERVVGEVK-NKVGALDGISYVQEHGSPKGKSKAVAFFK 891
            Q+ A   LLNLSI  D +  +     +PS+ HVL       +  A ++AAATL SL +V+ E++ T+G    I  AL+ ++ +     R  KDA  A F + +Y+ ++   +R G VP++ GLV           ++++A A+++ +++  E + A      V  L  M+    G+ + R +ENA A +L+L   G   +V   +  + G +  +  +  +G+ +GK KAV   +
Sbjct:  426 QEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKN----GSMEARENAAATLFSL-SVIDEYKVTIGGMGAI-PALVVLLGE--GSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTG-----ALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMI----GSGTPRNRENAAAVMLHLCS-GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLE 642          
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: PUB18_ARATH (U-box domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=PUB18 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 3.770e-7
Identity = 46/181 (25.41%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  358 LAVVAEFRPTVGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVAALLNLVRYGSERVVGE-VKNKVGALDGISYVQEHGSPKGKSKAVAFFKLL 897
            L+ V ++   +G  P+ +  L++I+   D      + AL A  G+ +   +   ++  GAVP+L  L+   + G+   G+  D  A +A++A   +     ++  G+ +LA+ + S S +  +  K++ V  +LNL   G   VVG  VKN +  +  +  V  +G   G  KA A  +++
Sbjct:  498 LSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLL---RSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGL-KLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSL-VMGSLYTVLSNGEYGGSKKASALIRMI 673          
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.731e-7
Identity = 63/234 (26.92%), Postives = 122/234 (52.14%), Query Frame = 1
Query:  193 QDDAAATLLNLSI--SDRRXXXXXXXXXXXXXHVLSRHXXXXXXXXXXXXXXTLHSLLAVVAEFRPTVGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVAALLNLVRYGSERVVGEVKNKVGALDGISYVQEHGSPKGKSKAVAFF 888
            Q+ A  ++LNLSI   ++  ++     +P + HVL +     +  A ++AAATL SL +V+ E + T+GA   I   L++++S+     R  KDA  A F + +++ ++   VR G VPVL  L+ + +      G+++++ +++A +++  + +        V  L   + S S     R KEN+ A L++L  +  + ++     K+G +D +  + E+G+ +GK KA    
Sbjct:  415 QEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQK----GSMEARENAAATLFSL-SVIDENKVTIGAAGAI-PPLVTLLSEGSQ--RGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPES-----GMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSP----RNKENSAAVLVHLCSWNQQHLIE--AQKLGIMDLLIEMAENGTDRGKRKAAQLL 629          
BLAST of Vigun01g027700.1 vs. DB:Swiss
Match: PUB41_ARATH (U-box domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=PUB41 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 5.842e-7
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 1
Query:  388 VGAKPEILRALISIISDPDSLTRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGIIEDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVAALLNLVRYGSERVVGEVKNKVGALDGISYVQEHGSPKGKSKA 876
            +GA   +L AL S  S+     R  +DA  A + ++L   +RT LVR GAVP L  +V +  D   ++ +      V+  +AAC + + A L  + V+ L   L    G  S   +EN VA LL L + G+ R  G + ++ GA + +  V+E+G+ + K KA
Sbjct:  357 LGAVEPLLHALRSSESE-----RARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMV-RSGDSTSRILL------VLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQ-GNLRFRG-LASEAGAEEVLMEVEENGNERVKEKA 505          
The following BLAST results are available for this feature:
BLAST of Vigun01g027700.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
PUB38_ARATH2.216e-931.22U-box domain-containing protein 38 OS=Arabidopsis ... [more]
PUB2_ARATH1.416e-830.03U-box domain-containing protein 2 OS=Arabidopsis t... [more]
PUB4_ARATH1.465e-830.38U-box domain-containing protein 4 OS=Arabidopsis t... [more]
PUB1_MEDTR7.263e-825.56U-box domain-containing protein 1 OS=Medicago trun... [more]
SL11_ORYSJ3.011e-728.51E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa ... [more]
SL11_ORYSI3.011e-728.51Protein spotted leaf 11 OS=Oryza sativa subsp. ind... [more]
PUB18_ARATH3.770e-725.41U-box domain-containing protein 18 OS=Arabidopsis ... [more]
PUB12_ARATH4.731e-726.92U-box domain-containing protein 12 OS=Arabidopsis ... [more]
PUB41_ARATH5.842e-732.52U-box domain-containing protein 41 OS=Arabidopsis ... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 37..77
e-value: 4.9
score: 15.6
coord: 167..212
e-value: 9.8
score: 13.3
coord: 213..257
e-value: 11.0
score: 12.9
IPR000225ArmadilloPFAMPF00514Armcoord: 44..76
e-value: 2.9E-4
score: 20.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 6..299
e-value: 4.3E-29
score: 103.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 7..300

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g027700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g027700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g027700.1; organism=Vigna unguiculata; type=mRNA; length=972bp
ATGGACACGAAATTGTTAACAATCCGTACACTGGTCTCCTCCCTCACTTC
CTCCTCCGACCAAACCCGTCTCGCCGCCCTCCGCCACCTCCGCCGCACCT
CCAACGAGGACCCCGCCTCCCGCACCATCATCTCCGCCGCCGGCGCCGTC
CCCCTCCTCGCCGCCGCGCTCTACTCCCCCTCCCACCCCATCCAAGACGA
CGCCGCCGCCACCCTCCTCAACCTCTCCATCTCCGACCGCCGCCCCCTGC
TCTCCTGCCCCGCCCTCCTACCTTCCCTCGCCCACGTCCTCTCCCGCCAC
GCCACCTCCTCCGCCCCATCCGCCGTCCAATCCGCCGCCGCCACCCTCCA
CAGCCTCCTCGCCGTGGTAGCCGAGTTCCGCCCCACCGTCGGTGCAAAAC
CGGAGATTCTCCGTGCCCTCATCAGTATAATCAGCGATCCCGATTCGCTG
ACGAGGACGATCAAGGATGCTCTGAAAGCATCGTTCGGAATTGCACTCTA
CCGGCCGAGCCGAACCGCACTGGTCCGGCTGGGCGCCGTTCCCGTGCTCT
TCGGTCTGGTGGCGAAGGACAAGGACGGGAAGAGAAAAGTTGGCATAATC
GAGGATGCGACGGCGGTGATCGCGCAGATTGCGGCGTGCGAGGAGAGCGA
GGACGCGTTTCTTAAGGTTTCGGGGGTTTCTAGGTTGGCCATGATGCTGT
GTTCCGAAAGTGGAAACTGTAGTTTGAGGACAAAGGAGAATGCTGTTGCG
GCGTTGTTGAATCTCGTGAGATATGGGAGTGAGAGAGTGGTTGGAGAGGT
TAAGAACAAGGTTGGGGCTTTGGATGGAATCTCCTACGTGCAGGAACACG
GTAGCCCCAAAGGGAAGAGCAAAGCCGTCGCATTTTTCAAGCTTCTGCTT
GATGGTGGAAGCAGTGGTGAAATTGCTCAAGATTTGTACCCGGTTCACTC
TGATTCCGGTTCAAGCCGCTAG
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protein sequence of Vigun01g027700.1_Vu_IT97K-499-35_v1.1

>Vigun01g027700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g027700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g027700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=324bp
MDTKLLTIRTLVSSLTSSSDQTRLAALRHLRRTSNEDPASRTIISAAGAV
PLLAAALYSPSHPIQDDAAATLLNLSISDRRPLLSCPALLPSLAHVLSRH
ATSSAPSAVQSAAATLHSLLAVVAEFRPTVGAKPEILRALISIISDPDSL
TRTIKDALKASFGIALYRPSRTALVRLGAVPVLFGLVAKDKDGKRKVGII
EDATAVIAQIAACEESEDAFLKVSGVSRLAMMLCSESGNCSLRTKENAVA
ALLNLVRYGSERVVGEVKNKVGALDGISYVQEHGSPKGKSKAVAFFKLLL
DGGSSGEIAQDLYPVHSDSGSSR*
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mRNA from alignment at Vu01:3304948..3305919-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g027700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g027700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g027700.1; organism=Vigna unguiculata; type=mRNA; length=972bp; location=Sequence derived from: Vu01:3304948..3305919- (Vigna unguiculata
ATGGACACGAAATTGTTAACAATCCGTACACTGGTCTCCTCCCTCACTTC CTCCTCCGACCAAACCCGTCTCGCCGCCCTCCGCCACCTCCGCCGCACCT CCAACGAGGACCCCGCCTCCCGCACCATCATCTCCGCCGCCGGCGCCGTC CCCCTCCTCGCCGCCGCGCTCTACTCCCCCTCCCACCCCATCCAAGACGA CGCCGCCGCCACCCTCCTCAACCTCTCCATCTCCGACCGCCGCCCCCTGC TCTCCTGCCCCGCCCTCCTACCTTCCCTCGCCCACGTCCTCTCCCGCCAC GCCACCTCCTCCGCCCCATCCGCCGTCCAATCCGCCGCCGCCACCCTCCA CAGCCTCCTCGCCGTGGTAGCCGAGTTCCGCCCCACCGTCGGTGCAAAAC CGGAGATTCTCCGTGCCCTCATCAGTATAATCAGCGATCCCGATTCGCTG ACGAGGACGATCAAGGATGCTCTGAAAGCATCGTTCGGAATTGCACTCTA CCGGCCGAGCCGAACCGCACTGGTCCGGCTGGGCGCCGTTCCCGTGCTCT TCGGTCTGGTGGCGAAGGACAAGGACGGGAAGAGAAAAGTTGGCATAATC GAGGATGCGACGGCGGTGATCGCGCAGATTGCGGCGTGCGAGGAGAGCGA GGACGCGTTTCTTAAGGTTTCGGGGGTTTCTAGGTTGGCCATGATGCTGT GTTCCGAAAGTGGAAACTGTAGTTTGAGGACAAAGGAGAATGCTGTTGCG GCGTTGTTGAATCTCGTGAGATATGGGAGTGAGAGAGTGGTTGGAGAGGT TAAGAACAAGGTTGGGGCTTTGGATGGAATCTCCTACGTGCAGGAACACG GTAGCCCCAAAGGGAAGAGCAAAGCCGTCGCATTTTTCAAGCTTCTGCTT GATGGTGGAAGCAGTGGTGAAATTGCTCAAGATTTGTACCCGGTTCACTC TGATTCCGGTTCAAGCCGCTAG
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Coding sequence (CDS) from alignment at Vu01:3304948..3305919-

>Vigun01g027700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g027700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g027700.1; organism=Vigna unguiculata; type=CDS; length=972bp; location=Sequence derived from: Vu01:3304948..3305919- (Vigna unguiculata
ATGGACACGAAATTGTTAACAATCCGTACACTGGTCTCCTCCCTCACTTC
CTCCTCCGACCAAACCCGTCTCGCCGCCCTCCGCCACCTCCGCCGCACCT
CCAACGAGGACCCCGCCTCCCGCACCATCATCTCCGCCGCCGGCGCCGTC
CCCCTCCTCGCCGCCGCGCTCTACTCCCCCTCCCACCCCATCCAAGACGA
CGCCGCCGCCACCCTCCTCAACCTCTCCATCTCCGACCGCCGCCCCCTGC
TCTCCTGCCCCGCCCTCCTACCTTCCCTCGCCCACGTCCTCTCCCGCCAC
GCCACCTCCTCCGCCCCATCCGCCGTCCAATCCGCCGCCGCCACCCTCCA
CAGCCTCCTCGCCGTGGTAGCCGAGTTCCGCCCCACCGTCGGTGCAAAAC
CGGAGATTCTCCGTGCCCTCATCAGTATAATCAGCGATCCCGATTCGCTG
ACGAGGACGATCAAGGATGCTCTGAAAGCATCGTTCGGAATTGCACTCTA
CCGGCCGAGCCGAACCGCACTGGTCCGGCTGGGCGCCGTTCCCGTGCTCT
TCGGTCTGGTGGCGAAGGACAAGGACGGGAAGAGAAAAGTTGGCATAATC
GAGGATGCGACGGCGGTGATCGCGCAGATTGCGGCGTGCGAGGAGAGCGA
GGACGCGTTTCTTAAGGTTTCGGGGGTTTCTAGGTTGGCCATGATGCTGT
GTTCCGAAAGTGGAAACTGTAGTTTGAGGACAAAGGAGAATGCTGTTGCG
GCGTTGTTGAATCTCGTGAGATATGGGAGTGAGAGAGTGGTTGGAGAGGT
TAAGAACAAGGTTGGGGCTTTGGATGGAATCTCCTACGTGCAGGAACACG
GTAGCCCCAAAGGGAAGAGCAAAGCCGTCGCATTTTTCAAGCTTCTGCTT
GATGGTGGAAGCAGTGGTGAAATTGCTCAAGATTTGTACCCGGTTCACTC
TGATTCCGGTTCAAGCCGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding