Vigun01g031900.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: NQR_ARATH (NADPH:quinone oxidoreductase OS=Arabidopsis thaliana OX=3702 GN=NQR PE=1 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 3.888e-100 Identity = 147/197 (74.62%), Postives = 172/197 (87.31%), Query Frame = 1 Query: 1 MAAVAGASSSLIKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYVDISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASRAPNVWAGKPAAIVSAXXXXXXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNRLKEILLSLKAFTLRLQGQ 591 M AV A LI+VAALSGSLRK S++ GL+RAAI+L+K S GLQIEY+DIS LP +NTDLE+NGTYP VEAFRQ+I+ ADSILFASPEYN+SV+ PLKNA+DWASR PNVWA KPAAI+S GGGFGGGRSQYHLRQIGVFLDLHFINKPEF +NAFQPP KF+++G+L+DE K RLK++LLSL+AFTLRLQG+ Sbjct: 1 MEAVT-AIKPLIRVAALSGSLRKTSFHTGLLRAAIDLTKESVPGLQIEYIDISPLPLINTDLEVNGTYPPVVEAFRQKILEADSILFASPEYNFSVSAPLKNALDWASRPPNVWADKPAAIISTGGGFGGGRSQYHLRQIGVFLDLHFINKPEFTLNAFQPPQKFDAEGNLVDEVTKERLKQVLLSLQAFTLRLQGK 196
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: NQR_SOLTU (NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 5.373e-90 Identity = 133/173 (76.88%), Postives = 148/173 (85.55%), Query Frame = 1 Query: 19 ASSSLIKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYVDISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASRAPNVWAGKPAAIVSAXXXXXXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNR 537 A+ +IKVA L GSLRKGSYNRGL+ AA+E+ K S G++IEYVDIS LPFLNTDLE+NGTYP VEAFR++I AD LFASPEYNYS+TGPLKNAIDWASR PNVWA K AA+VSAGGGFGGGRSQYHLRQIGVFLDLHFINKPEFF+NAFQ P KF+SDG L DE+ K R Sbjct: 2 AAQPVIKVAGLCGSLRKGSYNRGLLNAAMEICKDSITGMEIEYVDISPLPFLNTDLEVNGTYPPVVEAFRKKIEEADCFLFASPEYNYSITGPLKNAIDWASRPPNVWADKAAAMVSAGGGFGGGRSQYHLRQIGVFLDLHFINKPEFFLNAFQQPPKFDSDGVLTDEETKQR 174
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: NQR1_ORYSJ (Probable NADPH:quinone oxidoreductase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0953600 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 5.389e-82 Identity = 125/195 (64.10%), Postives = 154/195 (78.97%), Query Frame = 1 Query: 13 AGASSSLIKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYVDISALPFLNTDLEI-NGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASRAPNVWAGKPAAIVSAXXXXXXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNRLKEILLSLKAFTLRLQGQN 594 A A+ +I+VAA+ GSLRK SYN GL+RAA + + S GL++++VDIS LP LNTDLE +G +P VEAFR ++ AD LF SPEYNYS+ PLKNA+DWASR N WA KPAAIVSAGGGFGGGRSQYHLRQ+GVFLDLHFINKPE + AF+ P KF+SDG+LID + R+K++LLSL+AFTLRLQ ++ Sbjct: 3 AAAARPVIRVAAICGSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDLETADGGFPPAVEAFRDKVRQADCFLFGSPEYNYSIATPLKNALDWASRGQNCWADKPAAIVSAGGGFGGGRSQYHLRQVGVFLDLHFINKPELAVKAFEQPPKFDSDGNLIDAQIRERIKQVLLSLQAFTLRLQKKD 197
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: NQR2_ORYSJ (Probable NADPH:quinone oxidoreductase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0954000 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 7.423e-80 Identity = 120/190 (63.16%), Postives = 149/190 (78.42%), Query Frame = 1 Query: 22 SSSLIKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYVDISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASRAPNVWAGKPAAIVSAXXXXXXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNRLKEILLSLKAFTLRLQGQ 591 S ++VAA+SGSLR+GS N GL+RAA E+ + S G+ I++VDI LP LNTD+E++ +P VEAFR + AAD LFASPEYNYS++GPLKNA+DW SR PN WA + AAIVSA GG GG RS YH+RQ+GVFLD+HFINKPE FI A QPP KF+SDG+LID + K LK++LLSL+AF LRLQG+ Sbjct: 6 SPKALRVAAISGSLRRGSANTGLIRAAKEICEESIPGMVIDHVDIPDLPLLNTDMEVDDGFPPAVEAFRASVRAADCFLFASPEYNYSISGPLKNALDWGSRPPNCWADRAAAIVSASGGSGGSRSMYHIRQVGVFLDIHFINKPEVFIKAHQPPKKFDSDGNLIDPEIKEELKDMLLSLQAFALRLQGK 195
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: FMNRE_PSEAE (NAD(P)H-dependent FMN reductase PA1204 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA1204 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.097e-45 Identity = 92/187 (49.20%), Postives = 125/187 (66.84%), Query Frame = 1 Query: 34 IKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYVDISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASRAP-NVWAGKPAAIVSAXXXX-XXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNRLKEILLSLKAFTLRLQG 588 IKV +SGSLR GSYN ++ AI L G+ IE DIS +P N D+ G +P VE FR++I AAD++LFA+PEYNYS+ G LKNAIDWASR P ++GKPAAI+ A G G R+QYHLRQ VFLD+H +NKPE I++ Q F++ G L+D+ A+ +++ L +L+ + RL+G Sbjct: 5 IKVLGISGSLRSGSYNSAALQEAIGLVPP---GMSIELADISGIPLYNEDVYALG-FPPAVERFREQIRAADALLFATPEYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAGRFGTARAQYHLRQTLVFLDVHPLNKPEVMISSAQ--NAFDAQGRLLDDKARELIQQQLQALQLWVRRLRG 185
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: CHRR_SHIFL (Quinone reductase OS=Shigella flexneri OX=623 GN=chrR PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.558e-33 Identity = 75/190 (39.47%), Postives = 109/190 (57.37%), Query Frame = 1 Query: 25 SSLIKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYV-DISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASRAPNV-WAGKPAAI-VSAXXXXXXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNRLKEILLSLKAFTLRLQ 585 S ++V L GSLRKGS+N + R +++ S +++ + I+ +P + D++ +P+ VEA ++I AD ++ +PEYNYSV G LKNAIDW SR P+ AGKP I S+ G GG R QYHLRQI VFLD +NKPEF Q + G++ID+ + L L + F R++ Sbjct: 2 SEKLQVVTLLGSLRKGSFNGMVARTLPKIAPAS---MEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQT-GEVIDQGTLDHLTGQLTAFGEFIQRVK 187
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: CHRR_ECOLI (Quinone reductase OS=Escherichia coli (strain K12) OX=83333 GN=chrR PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.558e-33 Identity = 75/190 (39.47%), Postives = 109/190 (57.37%), Query Frame = 1 Query: 25 SSLIKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYV-DISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASRAPNV-WAGKPAAI-VSAXXXXXXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNRLKEILLSLKAFTLRLQ 585 S ++V L GSLRKGS+N + R +++ S +++ + I+ +P + D++ +P+ VEA ++I AD ++ +PEYNYSV G LKNAIDW SR P+ AGKP I S+ G GG R QYHLRQI VFLD +NKPEF Q + G++ID+ + L L + F R++ Sbjct: 2 SEKLQVVTLLGSLRKGSFNGMVARTLPKIAPAS---MEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQT-GEVIDQGTLDHLTGQLTAFGEFIQRVK 187
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: CHRR_ECO57 (Quinone reductase OS=Escherichia coli O157:H7 OX=83334 GN=chrR PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.558e-33 Identity = 75/190 (39.47%), Postives = 109/190 (57.37%), Query Frame = 1 Query: 25 SSLIKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYV-DISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASRAPNV-WAGKPAAI-VSAXXXXXXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNRLKEILLSLKAFTLRLQ 585 S ++V L GSLRKGS+N + R +++ S +++ + I+ +P + D++ +P+ VEA ++I AD ++ +PEYNYSV G LKNAIDW SR P+ AGKP I S+ G GG R QYHLRQI VFLD +NKPEF Q + G++ID+ + L L + F R++ Sbjct: 2 SEKLQVVTLLGSLRKGSFNGMVARTLPKIAPAS---MEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQT-GEVIDQGTLDHLTGQLTAFGEFIQRVK 187
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: HBQR_BURSP (2-hydroxy-1,4-benzoquinone reductase OS=Burkholderia sp. OX=36773 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.612e-31 Identity = 64/183 (34.97%), Postives = 106/183 (57.92%), Query Frame = 1 Query: 34 IKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYVDISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASR--APNVWAGKPAAIV-SAXXXXXXXRSQYHLRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDEDAKNRLKEILLSLKAFT 573 +K+A + GSLR+ S+N+ L A L+ ++VDI LP + D + + +P AF+Q+I AD +L +PEYN S+ G LKNA+DWASR +VW GKP AI+ ++ G G +Q HLR + +LD+ +N+PE +I ++ +++G+++ ED + L+ + A+ Sbjct: 3 LKIAVVVGSLRRDSFNKQLAHALASLAPSD---FSFDFVDIGGLPLYSQDYDSD--FPEVARAFKQQIADADGLLIVTPEYNRSMPGVLKNALDWASRPWGQSVWGGKPGAIIGTSVGAIGTAIAQSHLRGVCAYLDIVLMNQPEMYIK--HDESRIDANGNIVSEDTRKYLQTFMDKYAAWV 178
BLAST of Vigun01g031900.1 vs. DB:Swiss
Match: CHRR_PSEPU (Quinone reductase OS=Pseudomonas putida OX=303 GN=chrR PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.744e-25 Identity = 72/169 (42.60%), Postives = 97/169 (57.40%), Query Frame = 1 Query: 25 SSLIKVAALSGSLRKGSYNRGLVRAAIELSKGSNLGLQIEYVDISALPFLNTDLEINGTYPSEVEAFRQRIVAADSILFASPEYNYSVTGPLKNAIDWASR--APNVWAGKPAAIVSAXXXXXXXRSQYH-LRQIGVFLDLHFINKPEFFINAFQPPAKFNSDGDLIDE 522 S + VA + GSLRK SYNR + RA EL+ S+L L+I V+I LP N D+E P + FR+ I +D++LF +PE+N SV G LKNAID SR + W+GKP A+VS G GG H +RQ VFLD+ + PE +I + F+ G L D+ Sbjct: 2 SQVYSVAVVVGSLRKESYNRKVARALSELAP-SSLALKI--VEIGDLPLYNEDVEAEAP-PEAWKRFREEIRRSDAVLFVTPEHNRSVPGCLKNAIDVGSRPYGQSAWSGKPTAVVSVSPGAIGGFGANHAVRQSLVFLDMPCMQMPEAYIGGAA--SLFDDSGKLNDK 164 The following BLAST results are available for this feature:
BLAST of Vigun01g031900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g031900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g031900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g031900.1; organism=Vigna unguiculata; type=mRNA; length=926bpback to top protein sequence of Vigun01g031900.1_Vu_IT97K-499-35_v1.1 >Vigun01g031900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g031900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g031900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=199bpback to top mRNA from alignment at Vu01:4029327..4031154+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g031900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g031900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g031900.1; organism=Vigna unguiculata; type=mRNA; length=1828bp; location=Sequence derived from: Vu01:4029327..4031154+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:4029327..4031154+ >Vigun01g031900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g031900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g031900.1; organism=Vigna unguiculata; type=CDS; length=597bp; location=Sequence derived from: Vu01:4029327..4031154+ (Vigna unguiculataback to top |