Transcript Overview
Name | Vigun01g074700.2 |
Unique Name | Vigun01g074700.2_Vu_IT97K-499-35_v1.1 |
Type | mRNA |
Organism | Vigna unguiculata (cowpea) |
Sequence length | 2875 |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun01g074700.2 | Vigun01g074700.2_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
Vigun01g074700.2_Vu_IT97K-499-35_v1.1 | Vigun01g074700.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun01g074700.2.v1.1.five_prime_UTR.1 | Vigun01g074700.2.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun01g074700.2.v1.1.CDS.1 | Vigun01g074700.2.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.2 | Vigun01g074700.2.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.3 | Vigun01g074700.2.v1.1.CDS.3_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.4 | Vigun01g074700.2.v1.1.CDS.4_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.5 | Vigun01g074700.2.v1.1.CDS.5_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.6 | Vigun01g074700.2.v1.1.CDS.6_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.7 | Vigun01g074700.2.v1.1.CDS.7_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.8 | Vigun01g074700.2.v1.1.CDS.8_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.9 | Vigun01g074700.2.v1.1.CDS.9_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.10 | Vigun01g074700.2.v1.1.CDS.10_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun01g074700.2.v1.1.CDS.11 | Vigun01g074700.2.v1.1.CDS.11_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun01g074700.2.v1.1.three_prime_UTR.1 | Vigun01g074700.2.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
Homology
BLAST of Vigun01g074700.2 vs. DB:Swiss
Match: Y2349_ARATH (Uncharacterized protein At2g33490 OS=Arabidopsis thaliana OX=3702 GN=At2g33490 PE=4 SV=2) HSP 1 Score: 443.736 bits (1140), Expect = 1.450e-147 Identity = 304/612 (49.67%), Postives = 397/612 (64.87%), Query Frame = 1 Query: 34 ALHKTVSKDKRDFHPTVKFDELALAAKDMQDMRDCYDSLLSAAAATQNSAYEFAESLQEMGTCLLEKTTLNDDEESGKVLGMLGSVQLELQKLVDSYRSHIVLTITNPSESLLNELRTVEDMKRQCDEKREVYEYMIAQQXXXXXXXXXXXXXITLQQLQAAHDDYEEEATLCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPQVRMVAERQHIDYQFSX-XXXXXXXXXXXXXXXXXXVIEGGELSFDYRPNKQGPYIVSTSPNSAEVEEPGRSYVRASTPETAETSLDKN---QGDFKLSSRVSSYSAPILAEKKFD-PAEKVRQLIASSAAKSNAYVLPTPVNIKETKS--------SLAPRTSASGSLHNLWHSSPLDEKKNERDIDSKLSEPTIHRAHSVLKESNSDTTSIQLPRPSADGLSLPQVDVFNASDTKKIKIQTFSGPLTNKPLSVKPI-------SGGFPRLPVXXXXXXXXXXXXXXXLVSSPRISELHELPRPPGSKPVKSSR-VGHSAPLVFKTPEVTVANKFSSVISSVASPLPTPPIVSRSFSIPSSGQRAMTLNVSNAKYLDSPQVSKVDKAPSPPLTPMS 1806
LHK SKD+RD V+ DELA A++D++DMRDCYDSLL+AAAAT NSAYEF+ESL+E+G CLLEKT LNDDEESG+VL MLG +Q ELQKLVD YRSHI TIT PSESLLNELR VE+M+R CDEKR VYE M+ +Q+EKG+SK GKGE+ + QQLQ AHDDYE E TL FRLKSLKQGQ+RSLLTQAARHHAAQL FF+K L SLE V+P V+MV E QHIDY FSG +DD ++ N++++ +V + GELSF+YR N + S++ S+E+ ++ + P TA+ + + N F+ R S SAP+ E + P+EK+ ++ ++ K N Y LPTPV + S ++ +W+SSPL E + + S+ + VL+ESN +T+ +LP P ADGL +F+ T +K ++FSGPLT+KPL KP+ SG PR PV + +SP ASP VS+P+ISELHELPRPP KSSR +G+SAPLV ++ ++ +I++ ASPLP PP ++RSFSIP+S RA L++S +K PSPPLTPMS
Sbjct: 11 VLHKHESKDRRDLRALVQKDELAQASQDVEDMRDCYDSLLNAAAATANSAYEFSESLRELGACLLEKTALNDDEESGRVLIMLGKLQFELQKLVDKYRSHIFQTITIPSESLLNELRIVEEMQRLCDEKRNVYEGMLTRQREKGRSKGGKGETFSPQQLQEAHDDYENETTLFVFRLKSLKQGQTRSLLTQAARHHAAQLCFFKKALSSLEEVDPHVQMVTESQHIDYHFSGLEDDDGDDEIENNENDGSEVHDDGELSFEYRVNDKDQDADSSAGGSSELGNSDITFPQIGGPYTAQENEEGNYRKSHSFRRDVRAVSQSAPLFPENRTTPPSEKLLRMRSTLTRKFNTYALPTPVETTRSPSSTTSPGHKNVGSSNPTKAITKQIWYSSPL-ETRGPAKVSSR---SMVALKEQVLRESNKNTS--RLPPPLADGL------LFSRLGT--LKRRSFSGPLTSKPLPNKPLSTTSHLYSGPIPRNPVSKLPKVSSSPTASPTFVSTPKISELHELPRPPPRSSTKSSRELGYSAPLVSRSQLLS-----KPLITNSASPLPIPPAITRSFSIPTSNLRASDLDMSKTSL-----GTKKLGTPSPPLTPMS 598
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR027267 | AH/BAR domain superfamily | GENE3D | 1.20.1270.60 | | coord: 30..243 e-value: 1.5E-23 score: 85.8 |
IPR027267 | AH/BAR domain superfamily | SUPERFAMILY | 103657 | BAR/IMD domain-like | coord: 31..229 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 463..499 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 369..398 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 599..622 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 369..386 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 416..435 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 476..490 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 585..622 |
None | No IPR available | CDD | cd07307 | BAR | coord: 39..227 e-value: 3.42188E-26 score: 104.063 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g074700.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g074700.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g074700.2; organism=Vigna unguiculata; type=mRNA; length=2875bp TGGAAACGTGCGGGGTTCTGGGCTTAGGCTTAGGGGCGTGACGTTGGACT GATGCGTCTCTCGTTTCCTTATTTCGCAtctctctctctctctctctctc tctTGCTGTCTGATCTGCCTCTCTTCCCTTTCCTTCTTCTGCCTTTCTTT TGACCCACCTTCCCCCTTCTACTTCAATGTCTTTCACTCTCCTTAATCCA TTCCCACACTTTCCTTCTCTCTTTCACCCTTAAGATTCTTCCCCAATTCT CACCAAAACACAAACACAACACAAACCCTCTTTCCCCCTTCCTCCCTCCT AGGGTGCAAAATGAAGTCCTCGCTCAGCAAGTTGAAGAAAATTGCACTTC ACAAGACGGTTTCCAAGGACAAAAGGGACTTCCACCCCACCGTGAAGTTC GACGAACTCGCTCTTGCTGCCAAGGACATGCAAGATATGAGAGATTGCTA TGATAGCCTGCTTTCTGCAGCTGCTGCTACGCAAAACAGTGCTTACGAAT TTGCTGAGTCGCTGCAGGAAATGGGTACTTGTCTTTTGGAGAAAACTACC TTAAATGATGACGAAGAAAGTGGTAAAGTTTTGGGGATGCTTGGAAGTGT GCAGCTTGAGCTTCAGAAGCTTGTTGATAGCTATCGTTCTCACATTGTAC TGACAATAACCAATCCATCGGAGTCTCTTCTTAATGAACTAAGAACCGTT GAGGACATGAAGCGACAATGTGACGAGAAAAGAGAGGTTTATGAATACAT GATTGCACAACAAAAAGAGAAAGGAAAGTCAAAGAGTGGCAAAGGTGAAA GTATCACCTTACAGCAGTTGCAGGCAGCTCATGATGACTATGAAGAAGAA GCAACACTTTGTGCCTTTCGATTAAAATCACTCAAGCAAGGCCAGTCACG CAGTCTCCTTACACAAGCAGCACGTCACCATGCTGCTCAGTTAAATTTCT TTCGGAAAGGACTTAAATCACTAGAGGCGGTTGAGCCACAAGTCAGGATG GTTGCTGAAAGACAACATATTGATTACCAATTCAGTGGCCTTGAGGATGA CATTGGTGAAGATGGTAATAATGATGACAGTAATGATTTTGATGTCATTG AAGGCGGTGAACTGAGTTTTGACTACAGACCAAATAAGCAAGGACCATAT ATTGTTTCCACATCACCAAACTCAGCAGAGGTGGAAGAACCAGGTCGCTC TTATGTTCGAGCTTCAACCCCAGAAACTGCAGAAACAAGTCTAGACAAGA ACCAAGGGGATTTTAAACTTTCAAGTAGAGTCAGCAGTTATTCAGCTCCA ATACTTGCAGAAAAGAAATTTGACCCTGCTGAAAAAGTAAGACAACTTAT AGCATCATCTGCAGCAAAGTCTAATGCATATGTCCTTCCCACACCAGTTA ACATCAAAGAAACCAAAAGTAGCTTAGCCCCCCGCACAAGTGCAAGTGGA TCTCTGCATAACTTGTGGCATTCTTCTCCACTAGATGAAAAAAAGAATGA GAGAGATATTGATAGTAAATTGTCAGAACCGACCATCCATAGAGCTCACT CTGTTCTCAAAGAAAGTAACAGTGACACTACATCCATCCAGTTACCACGC CCGTCCGCAGATGGACTCTCACTTCCACAAGTTGATGTTTTCAATGCTTC TGATACTAAGAAAATAAAGATACAAACCTTTTCTGGTCCATTGACTAATA AACCATTGTCAGTAAAACCTATTTCTGGGGGTTTTCCACGTTTACCTGTA CCACAACCTTCATCTCCAAAAGCATCTCCCAATGCTTCACCTCCCCTTGT TTCTTCACCCAGGATAAGTGAACTTCATGAACTTCCTAGACCTCCTGGTA GTAAGCCAGTGAAATCTTCTCGAGTGGGTCACTCTGCCCCATTAGTATTT AAAACTCCAGAGGTTACTGTGGCTAATAAATTTTCTTCTGTTATATCCAG TGTAGCCTCTCCACTCCCAACACCACCAATAGTCTCTCGGAGTTTTTCTA TACCTTCCAGTGGTCAGAGGGCTATGACATTAAATGTTTCTAATGCTAAG TATTTGGATAGTCCCCAAGTTTCAAAGGTTGATAAAGCTCCATCACCACC TCTTACACCCATGTCTCAGAGAGTCTCTAGTATACCTGATATGGCTTCTC ACTCCAGTGAAATCCAAGGTGGGAGCTAAATCTCATGAACACATACCAAG GAATGAGTTCTGAATTGTTCTTAGTTCAAGTGTTTTTATTCTATGCTTGT GGGAGCTAAGTCCCTTTTGTTGTGGAGTTATAGGGGGGTTTTCGACAAAA AAGGTTCAGGCAAATATGTGTAAATATGTTGTTGATGTATTGTTTAGCTT CTCATCTCAATTTGTATCTATTATTTTTACTTTAACTAGTGATGATGAGA ACTAAACTCTACATGATTGTCATTATAATGTGTTGTGTATATATTCGGAT GAAAAATTTTGTTCACTTCTCCAAGTTCAACATGACAACAATGAAAGAAC TTTAGCAAGAGAGTGAGATCCATACCATTTTTTTCACATTCCAGGTGCTC AATGTTTGAACTAATTTCTAATTTCCAGGAGATGACATTTATTTTCATTG ACATGGGCTAATTTGTCTTAGTTTTAGGGTATTGAATCTTGGATTACTAT TAGGGAAGTGTTCCTTTCTTGTCAGTATATTTACAATTACCTTTTGTCCA GATGCACTCATTTCATTTGGACAGCAATTCGAGGTGCATATTAGAATAAA TAAAAAGGTGACTAGAACTAGTGATGTCTGAGCTACTTGAGTGGTTTATG TTTTGTTAAAATAGTACTACATAGTTATTTGTGAAAAAAATGTACCATGC AAAGTAGTATATGTTCATCAGGTAG back to topprotein sequence of Vigun01g074700.2_Vu_IT97K-499-35_v1.1 >Vigun01g074700.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g074700.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g074700.2_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=623bp MKSSLSKLKKIALHKTVSKDKRDFHPTVKFDELALAAKDMQDMRDCYDSL LSAAAATQNSAYEFAESLQEMGTCLLEKTTLNDDEESGKVLGMLGSVQLE LQKLVDSYRSHIVLTITNPSESLLNELRTVEDMKRQCDEKREVYEYMIAQ QKEKGKSKSGKGESITLQQLQAAHDDYEEEATLCAFRLKSLKQGQSRSLL TQAARHHAAQLNFFRKGLKSLEAVEPQVRMVAERQHIDYQFSGLEDDIGE DGNNDDSNDFDVIEGGELSFDYRPNKQGPYIVSTSPNSAEVEEPGRSYVR ASTPETAETSLDKNQGDFKLSSRVSSYSAPILAEKKFDPAEKVRQLIASS AAKSNAYVLPTPVNIKETKSSLAPRTSASGSLHNLWHSSPLDEKKNERDI DSKLSEPTIHRAHSVLKESNSDTTSIQLPRPSADGLSLPQVDVFNASDTK KIKIQTFSGPLTNKPLSVKPISGGFPRLPVPQPSSPKASPNASPPLVSSP RISELHELPRPPGSKPVKSSRVGHSAPLVFKTPEVTVANKFSSVISSVAS PLPTPPIVSRSFSIPSSGQRAMTLNVSNAKYLDSPQVSKVDKAPSPPLTP MSQRVSSIPDMASHSSEIQGGS* back to topmRNA from alignment at Vu01:20970222..20978311+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Vigun01g074700.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g074700.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g074700.2; organism=Vigna unguiculata; type=mRNA; length=8090bp; location=Sequence derived from: Vu01:20970222..20978311+ (Vigna unguiculata TGGAAACGTGCGGGGTTCTGGGCTTAGGCTTAGGGGCGTGACGTTGGACT
GATGCGTCTCTCGTTTCCTTATTTCGCATCTCTCTCTCTCTCTCTCTCTC
TCTTGCTGTCTGATCTGCCTCTCTTCCCTTTCCTTCTTCTGCCTTTCTTT
TGACCCACCTTCCCCCTTCTACTTCAATGTCTTTCACTCTCCTTAATCCA
TTCCCACACTTTCCTTCTCTCTTTCACCCTTAAGATTCTTCCCCAATTCT
CACCAAAACACAAACACAACACAAACCCTCTTTCCCCCTTCCTCCCTCCT
AGGGTGCAAAATGAAGTCCTCGCTCAGCAAGTTGAAGAAAATTGCACTTC
ACAAGACGGTTTCCAAGGACAAAAGGGACTTCCACCCCACCGTGAAGTTC
GACGAACTCGCTCTTGCTGCCAAGGTTCTTCTCCCACTCTACTTTGATTT
TTCAACCTTAATATTATCATTATCATTATAATGAATAAATAGATAATTTC
TTCGTTGCGCCTTGTTATGTGCCTTTTGCAATTATCGTGTTTTGTCGCAA
CGATGATCGGTTGTTGTCAATGACGGAACGCGGGGGTTTTGTTCTGGAGA
TGGCACGTGGACAGTGTGTTTTTTCCGATGGGAATTTGGTTCTCTTACTG
CTGGCTTTAATTCGTTTTCATTTAGTAGTAGTAGTAGTAGTTACAGGCTT
TGGGTGTGGAAAAAGTGTGTGTTAATGGTGATTTTGTGAGAAATGTTGAA
CGATCTCGTGCCTCTGGCTTGCTTGTTGTAGTCTCGTAAAGGCTTTTCTC
TCTCTCTTTTCAGGACATGCAAGATATGAGAGATTGCTATGATAGCCTGC
TTTCTGCAGCTGCTGCTACGCAAAACAGTGCTTACGGTAAACATTAGTCT
TCATACTTCTAATGTATTCCAAGCTTTTGAATTGGTTGTGCATTTTGTTA
TCTGTCCAAATTTAGGTCACAAATTAAAAGTGCACAGACACACACACGTT
TCATTTACTTGTTATATTATATATAAAGTCTCCAACAATTTTAGATACAT
GTTTGCATTTCGATTCGAGTTGCCGCAGTCCATCCTTGGCTGGTCTTCTG
CGCTAGCGCTATCCGTATTAGGGAATACGCATTCATTTCTTTTTCATTTG
TATTCTTGTTTAGTTTCTCTGCGATAGAATTAGCTTTTGAGTTAGGATTT
CTTTTTTTGCTGACTCAGTAGTGAGTCACTTAGCATAGGTGTATAATATA
TCATCTCTCTGTAATTTGCATTCTAATGATCAGATTACATTTCCTATTTC
TTCTACTTATGTCTTTCACTTAGCAAAATTTATTGATCCATGAAGTTTAG
CATTGAGATCCAATTCTAAAATAGGGAAATAGCTTATAATGCTGAACTTG
CACACCCTGCCCTTATCATGCCTTCTTATTCTTATTGACATTATTGTTGT
GACAACATTTTAAGTATTGTGAGGTGCAGCATTGAGGTATTTGAAAATGT
CATGGTCTCCACTATAGGACGTATTATCTCTTCAAGCCTATTCACTGTAT
TATATTTATTGATCATTTGAAAAAGAGTTGTCTAGTTTATTTCTTTAGAT
GAGTTTTGCTGCCTTGAAAATAGTGAAGTTGGTATCATATCCTTTACTGT
GTTATGTGTTCCAGAATTTGCTGAGTCGCTGCAGGAAATGGGTACTTGTC
TTTTGGAGAAAACTACCTTAAATGATGACGAAGAAAGTGGTGAGTGGGTA
AACATTTGATGACTGCCCTATCCAAGTTACTTAGCCTATTTGCTAGTTGA
TTTAAACCATGTATATAGTCTCATTGCAATAGTTGTTATGAACTGTATGC
AGGTAAAGTTTTGGGGATGCTTGGAAGTGTGCAGCTTGAGCTTCAGAAGC
TTGTTGATAGCTATGTGAGCCTTTATCTGGGTGTATCCTTTTTTATTTCC
TTGCTTCTCCTTGAGCATTGTTCATTTACAAAATGTTTATTATGATTCTA
TCCTTTCTGTTCCTCAGCGTTCTCACATTGTACTGACAATAACCAATCCA
TCGGAGTCTCTTCTTAATGAACTAAGAACCGTTGAGGTATGTTTATGTAT
TTATTTCTTTTATCTGATTCCTCTATCATTATAAAGCACCCAATAGCCTG
ACTGGGCTCTACAGTGCACACTTCTGAATTCGTTGTTTCCATGTTTCCCT
TGTTGTTCATTACACTTTTATTTTAATGGTTACTGGAAAATGCAGTTTCC
TATCAGCACAACACAGAATGGAATGCAATTAAAAGAAAATGGTGTTTTGG
AACTTAGAGTAATGCTTTGCAGGGGTGATTCTTAAATCTCATCCCCTTAC
GATTATATGTGGATGGTTATCAAATATTTGTAATCTTCAATTTGGTTAAA
GGGACATTTTGAACCTACAGAATGTATAATTGTTGATAGAAATTCTGGAT
CAACCTGAATTTTAGTCCAACAAGAACAATACACTGATTTAAGTCCTTTC
AGAGTCTTCCTCTCTTAAACATACTCAGTACAAACTACCCACTAAATAAT
ACAGAAACTGCCATGCCATCTACATATATAACACCATTCAACAACTATCA
CACAAACCCATAAATTCTTGGTGCCTAAAGATGCAAATTGCAGGCCTATA
CTAATGGTGCATCTAGATGAGAGGAAAGAAAAACAGATAATATAAACTGT
TTGTTCTGTTGAAGAGAAAATAAAGGGAAAAAATGAACTTTTAGTAAAAA
GAATTCAATTTTTTCTTTCCTTCCATTTTCTCTTCAATTCATATTTCAAC
TTTTTCTTTCCTCTCAAACAGAGGGTAATGTTTCATATCTGTGACTACCT
AAAGAGACTCTGCATAGTTAGTTGCCTTAGCACACAAATTCGTTATATAT
GATGTTGAAACCACATCATGACATGATTTCTTGTTGTGATCTCTTTTTTC
CTGTTTAATGAATTATATATTCTGGAAGAATCTCATGATATTTATAAGTG
TACCCTCCTTATAGTGATTAACTTTCGAAATTGTTGCAATAACACCTGTT
TCCCTAACTGAGATATCCTTGTGAAGGATTGATTGTTGCCTTATAACACA
AAGACAGTGACATTATTCACACATCCATTGCTTGGTTGTTGTGTAAATCT
GACTGTTTCTTGTTCTCACCCTCCATGCATCACATATGACATATTTAAAA
TATATTCACATGGAGTTTGTGGATTCACTGATGTTTTAAAAAGTTGTTAG
GTTCTTCATACTGCAAAATATTGTGGAAAAACTGTAAAACATGTTTCTCT
AAATCTAATAATGTGTTTTAGAGCTGCTATAGATAAAGGGATTTGCACAA
AGCTTTAGGTTCAACTAAAAAGTTCATTCATACTTGTAAGATGTTACGTT
CTGATTGTAAAGGACGAGAAATTGGCCTGAATTGTAAGTATGGAATTTTA
GTATTTGTGGTTTATGAGGCTGTAGGCTCTCCAACTTTCCAAGTACAATC
GCTAGTGTTTGTGGTGTGATTCACCCAATGTTGCTTTCATTATTCAGTGC
TTCCAGTAAAACTTGTTACATTTGACAGTTCATTAAAATGGTAAATCAAC
TTATTAAGCAAGTAAGATTTCATAAATCTTGGATATTAATAAATATATCC
AGTAAAATAATTTGAAAACATTGGAAACCCTGTGTCTCAGATAGAGGATG
TGATTATTGATGCTTAGTGAAATGGGCAGGGTTTATGAGGCTGTAGGCTC
TCCAACTTTCCAATTACAATGGCTAGTCTTTGTGGTGTGGTTCTCCCAAT
GTTACTTTCATTATTCCGTGCTTCCAGTAAAACTTTTTACATTTGACAGT
TCATTAACATGGTAGTAAATCAACTTATTAAGCAAGTAAGATTTCATAAA
TCATGAATATAATAAATATATCCAGTAAAATAATTTGAAAACATTGGAAA
TTCTCTTTGTCTCATAGAGAATGTGATTATTGAAGCTTAGTGAAATGGGC
AGGGTTTCAGATAGAGAATGTGATTATTGAAGCTTAGTGAAATGGGCGGG
GTTTTATATCTTAACTGGTTTATCACTGTGTTACTAACAGCTGATTGCGG
AGAATAACAAAAAGCTAAAAGTCCATTATATATTATAGCATATAGGGACA
TAGGCAACTAGTGGAATATTCATCCAGGTAGAAGTAAATCAATTATATAT
GTATAAAAATGTATACAAACAAAATAAGCTTGTGTTTCTGACTTATTGCG
ATGAAAATTCTGAAAGTTGAATTTTATGCATTTGAAGTTGACTAGTCGTT
AGTGGGTGATTTGTTAGATATTGTATGTGTATGCAAGAGATTTGAGGCTT
GTTAATAACGACAATTGAACTTGAACTGAGTAAGGTGCAGGACTATAGAA
GTATTGCAAAACTTAAAGGGGAAGGAAAAAGTAGTATTTTTCAGTTTTTG
CCTTCTCTTATTTAAGCCTGACATTTACATATTTTTGTTTTCTTTACAAA
TCTCTAGCCTGAGATTTAAAAACTGTCCTTTTTTTATTCTTTTTAACACT
ATATAGATTGCCTTGTCTAGATAGAACCACGGTCAATGAATTTGGAACTA
TAGTGACTTTGCTGGTGTATGAATTATATTGAATGTAGAACTGTAAATTG
TCTTGTTACATCTCAATGCCTGTCTGTTCCTCATGCAGGACATGAAGCGA
CAATGTGACGAGAAAAGGTTTGTCTTTACACAACTTATATTATTTTCCTT
AGCATTATGTGATGTTTCCTGAATCTGTTGTGTTGCCTGCAGAGAGGTTT
ATGAATACATGATTGCACAACAAAAAGAGAAAGGAAAGTCAAAGAGTGGC
AAAGGTGAAAGTATCACCTTACAGCAGTTGCAGGCAGCTCATGATGACTA
TGAAGAAGAAGCAACACTTTGTGCCTTTCGATTAAAATCACTCAAGCAAG
GCCAGTCACGCAGTCTCCTTACACAAGCAGCACGTCACCATGCTGCTCAG
GTTTTCTTCAACTATGACATTTCTCCTCATTCAAATCTTTTATCCTTTCT
TCTGCATAGTCTTGATGCATGTTTCCTCTTGTTCTGCTTTCAATATAGTT
AAATTTCTTTCGGAAAGGACTTAAATCACTAGAGGCGGTTGAGCCACAAG
TCAGGATGGTTGCTGAAAGACAACATATTGATTACCAATTCAGTGGCCTT
GAGGATGACATTGGTGAAGATGGTAATAATGATGACAGTAATGATTTTGA
TGTCATTGAAGGCGGTGAACTGAGTTTTGACTACAGACCAAATAAGCAAG
GACCATATATTGTTTCCACATCACCAAACTCAGCAGAGGTGAGAATTTTG
TATTACTCAACTTGAATGGTATTTTAAAGCCTTAGATCATATTGAACTTT
ATTATAATTGCTTATTTACTTCTTTTTTTAAATTAATTTAAAACATTGCC
AGAGCTTGTCACACTTGTTATTTTATTCTTGTTTGTTTCTACCATCCATA
CCTTGTGACAAATTTAAAACATAATATCCTTATTTTTTCAGATTCTGAAT
TATAAATTTATCTTATAATGATCATTGGCCATGTATTGCTTGCTAGGTGG
AAGAACCAGGTCGCTCTTATGTTCGAGCTTCAACCCCAGAAACTGCAGAA
GTACTTTTCACAACTACCTTGATATATTAATTGAAACTTTTTTTATTTAA
ATCTTAAATTAACTCTAAAGAAAAATCTAGGCCAATTAGAACCTTAGTGT
GTCACCTAATAAAGATCACAAATAAAGTTATGTACTATTTTCTTAATGAT
TTAAAGACATAGCTTTAGAATGTAATTATTATGTTCTAACTGTGGCCTCA
GTCTAACAGATCATCAGTTCAGGTTGATTCTTTAATCTTACTTAGATTAT
CCTCTAATACTTCTATTAACTTGCATTCTGGCAGACAAGTCTAGACAAGA
ACCAAGGGGATTTTAAACTTTCAAGTAGAGTCAGCAGTTATTCAGCTCCA
ATACTTGCAGAAAAGAAATTTGACCCTGCTGAAAAAGTAAGACAACTTAT
AGCATCATCTGCAGCAAAGTCTAATGCATATGTCCTTCCCACACCAGTTA
ACATCAAAGAAACCAAAAGTAGCTTAGCCCCCCGCACAAGTGCAAGTGGA
TCTCTGCATAACTTGTGGCATTCTTCTCCACTAGATGAAAAAAAGAATGA
GAGAGATATTGATAGTAAATTGTCAGAACCGACCATCCATAGAGCTCACT
CTGTTCTCAAAGAAAGTAACAGTGACACTACATCCATCCAGTTACCACGC
CCGTCCGCAGATGGACTCTCACTTCCACAAGTTGATGTTTTCAATGCTTC
TGATACTAAGAAAATAAAGATACAAACCTTTTCTGGTCCATTGACTAATA
AACCATTGTCAGTAAAACCTATTTCTGGGGGTTTTCCACGTTTACCTGTA
CCACAACCTTCATCTCCAAAAGCATCTCCCAATGCTTCACCTCCCCTTGT
TTCTTCACCCAGGATAAGTGAACTTCATGAACTTCCTAGACCTCCTGGTA
GTAAGCCAGTGAAATCTTCTCGAGTGGGTCACTCTGCCCCATTAGTATTT
AAAACTCCAGAGGTTACTGTGGCTAATAAATTTTCTTCTGTTATATCCAG
TGTAGCCTCTCCACTCCCAACACCACCAATAGTCTCTCGGAGTTTTTCTA
TACCTTCCAGTGGTCAGAGGGCTATGACATTAAATGTTTCTAATGCTAAG
TATTTGGATAGTCCCCAAGTTTCAAAGGTTGATAAAGCTCCATCACCACC
TCTTACACCCATGTCTCAGAGAGTCTCTAGTATACCTGATATGGCTTCTC
ACTCCAGTGAAATCCAAGGTAAGAAACTAGTAATTGTTGTAGTTCTTATT
GTTGTAAATTTTTATAAATTTGGATATGTTTTTCTGTCTTCATATAATAA
TAACTAACTTTTTGTGTAAATTGAATATGCTTTCAAATAGATAATAGTTT
GTAGGGTCTGTTTGGACTAACATCTCCCAGAAAACTTTCAGGATGAAATT
GACTTTTACACAAGTTATTAACATATGCCCAATCGAATTTGTAGGAGTTC
TCTTATATATCTTCTCCAAATTTTTATGAAGAAATCAATTTCATTTTTTT
CTTCATATTTTTTCTCCTTAAAGTCATTGTGGAGAAGTTCTTCCAATTAG
TTACATGACTTTTTTAACTTGATTTTACATAGTTTAGGTACAAGCATCCT
TGGTCTATTATGTGGTCTATGGAGTGTGTTTAGCATCAACATTTTCCTTT
TTGTTATTTTCATTATGGTTTACCTTGTCAATTTCATCTTGATGAAAAAC
AAATGTGAGTATGAGGTTTTTCAGTGGATGCAGGTGGGAGCTAAATCTCA
TGAACACATACCAAGGAATGAGTTCTGAATTGTTCTTAGTTCAAGTGTTT
TTATTCTATGCTTGTGGGAGCTAAGTCCCTTTTGTTGTGGAGTTATAGGG
GGGTTTTCGACAAAAAAGGTTCAGGCAAATATGTGTAAATATGTTGTTGA
TGTATTGTTTAGCTTCTCATCTCAATTTGTATCTATTATTTTTACTTTAA
CTAGTGATGATGAGAACTAAACTCTACATGATTGTCATTATAATGTGTTG
TGTATATATTCGGATGAAAAATTTTGTTCACTTCTCCAAGTTCAACATGA
CAACAATGAAAGAACTTTAGCAAGAGAGTGAGATCCATACCATTTTTTTC
ACATTCCAGGTGCTCAATGTTTGAACTAATTTCTAATTTCCAGGAGATGA
CATTTATTTTCATTGACATGGGCTAATTTGTCTTAGTTTTAGGGTATTGA
ATCTTGGATTACTATTAGGGAAGTGTTCCTTTCTTGTCAGTATATTTACA
ATTACCTTTTGTCCAGATGCACTCATTTCATTTGGACAGCAATTCGAGGT
GCATATTAGAATAAATAAAAAGGTGACTAGAACTAGTGATGTCTGAGCTA
CTTGAGTGGTTTATGTTTTGTTAAAATAGTACTACATAGTTATTTGTGAA
AAAAATGTACCATGCAAAGTAGTATATGTTCATCAGGTAG back to topCoding sequence (CDS) from alignment at Vu01:20970222..20978311+ >Vigun01g074700.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g074700.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g074700.2; organism=Vigna unguiculata; type=CDS; length=1869bp; location=Sequence derived from: Vu01:20970222..20978311+ (Vigna unguiculata ATGAAGTCCTCGCTCAGCAAGTTGAAGAAAATTGCACTTCACAAGACGGT TTCCAAGGACAAAAGGGACTTCCACCCCACCGTGAAGTTCGACGAACTCG CTCTTGCTGCCAAGGACATGCAAGATATGAGAGATTGCTATGATAGCCTG CTTTCTGCAGCTGCTGCTACGCAAAACAGTGCTTACGAATTTGCTGAGTC GCTGCAGGAAATGGGTACTTGTCTTTTGGAGAAAACTACCTTAAATGATG ACGAAGAAAGTGGTAAAGTTTTGGGGATGCTTGGAAGTGTGCAGCTTGAG CTTCAGAAGCTTGTTGATAGCTATCGTTCTCACATTGTACTGACAATAAC CAATCCATCGGAGTCTCTTCTTAATGAACTAAGAACCGTTGAGGACATGA AGCGACAATGTGACGAGAAAAGAGAGGTTTATGAATACATGATTGCACAA CAAAAAGAGAAAGGAAAGTCAAAGAGTGGCAAAGGTGAAAGTATCACCTT ACAGCAGTTGCAGGCAGCTCATGATGACTATGAAGAAGAAGCAACACTTT GTGCCTTTCGATTAAAATCACTCAAGCAAGGCCAGTCACGCAGTCTCCTT ACACAAGCAGCACGTCACCATGCTGCTCAGTTAAATTTCTTTCGGAAAGG ACTTAAATCACTAGAGGCGGTTGAGCCACAAGTCAGGATGGTTGCTGAAA GACAACATATTGATTACCAATTCAGTGGCCTTGAGGATGACATTGGTGAA GATGGTAATAATGATGACAGTAATGATTTTGATGTCATTGAAGGCGGTGA ACTGAGTTTTGACTACAGACCAAATAAGCAAGGACCATATATTGTTTCCA CATCACCAAACTCAGCAGAGGTGGAAGAACCAGGTCGCTCTTATGTTCGA GCTTCAACCCCAGAAACTGCAGAAACAAGTCTAGACAAGAACCAAGGGGA TTTTAAACTTTCAAGTAGAGTCAGCAGTTATTCAGCTCCAATACTTGCAG AAAAGAAATTTGACCCTGCTGAAAAAGTAAGACAACTTATAGCATCATCT GCAGCAAAGTCTAATGCATATGTCCTTCCCACACCAGTTAACATCAAAGA AACCAAAAGTAGCTTAGCCCCCCGCACAAGTGCAAGTGGATCTCTGCATA ACTTGTGGCATTCTTCTCCACTAGATGAAAAAAAGAATGAGAGAGATATT GATAGTAAATTGTCAGAACCGACCATCCATAGAGCTCACTCTGTTCTCAA AGAAAGTAACAGTGACACTACATCCATCCAGTTACCACGCCCGTCCGCAG ATGGACTCTCACTTCCACAAGTTGATGTTTTCAATGCTTCTGATACTAAG AAAATAAAGATACAAACCTTTTCTGGTCCATTGACTAATAAACCATTGTC AGTAAAACCTATTTCTGGGGGTTTTCCACGTTTACCTGTACCACAACCTT CATCTCCAAAAGCATCTCCCAATGCTTCACCTCCCCTTGTTTCTTCACCC AGGATAAGTGAACTTCATGAACTTCCTAGACCTCCTGGTAGTAAGCCAGT GAAATCTTCTCGAGTGGGTCACTCTGCCCCATTAGTATTTAAAACTCCAG AGGTTACTGTGGCTAATAAATTTTCTTCTGTTATATCCAGTGTAGCCTCT CCACTCCCAACACCACCAATAGTCTCTCGGAGTTTTTCTATACCTTCCAG TGGTCAGAGGGCTATGACATTAAATGTTTCTAATGCTAAGTATTTGGATA GTCCCCAAGTTTCAAAGGTTGATAAAGCTCCATCACCACCTCTTACACCC ATGTCTCAGAGAGTCTCTAGTATACCTGATATGGCTTCTCACTCCAGTGA AATCCAAGGTGGGAGCTAA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: INTERPRO
Term | Definition |
IPR027267 | AH/BAR_dom_sf |
|