Vigun01g105200.1

Transcript Overview
NameVigun01g105200.1
Unique NameVigun01g105200.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1817
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:27610810..27613152 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
psvuL193Pisum sativum Cameor genome v1aPisum sativum
crvuL231Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL163Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0247Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0868Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0078Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0709Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL412Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR020Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL001Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL431Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL142Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL337Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL159Cicer arietinum
ccavuL194Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR051Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL324Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_07253.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014635666.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cc_v2.0_02794.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
jg33236.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va03G062980.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_04G01860.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat03G0269200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat3g080040.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_11837Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.04G261100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_009659Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_004493327.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.001G121200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr01.1041Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.04G165200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cr_07406.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_06817.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-TanjilR_32890Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.5g099640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan03g212300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_07159Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
PvulFLAVERTChr01.792Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g105200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g105200Vigun01g105200_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g105200.1Vigun01g105200.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g105200.1_Vu_IT97K-499-35_v1.1Vigun01g105200.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g105200.1.v1.1.five_prime_UTR.1Vigun01g105200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g105200.1.v1.1.CDS.1Vigun01g105200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g105200.1.v1.1.CDS.2Vigun01g105200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g105200.1.v1.1.three_prime_UTR.1Vigun01g105200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.975e-69
Identity = 116/170 (68.24%), Postives = 145/170 (85.29%), Query Frame = 1 
Query:  172 FYPFHVSQITPTPSHHDRALAAMKNHKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELET--VPSETDEITVLSTGGDYGSDGRLVFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVVAADKE-HSIESINFLQ 672
            +YP  +S I  T +  DRALAA++NHKEAE+RRRERINSHL++LR +L CNSKTDKA+LLAKVVQRV+ELKQQT E ++ +   +PSETDEI+VL  G DY +DG ++FKASLCCEDRSDL+PDL+EIL SL++KTL+AEM T+GGRTR+VLVVAADKE H +ES++FLQ
Sbjct:   47 YYPLAISGIGETMAQ-DRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHFG-DYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQ 214
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.817e-66
Identity = 103/155 (66.45%), Postives = 130/155 (83.87%), Query Frame = 1 
Query:  214 HHDRALAAMKNHKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVLST-GGDYGSDGRLVFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVVAADKE-HSIESINFLQ 672
            + D+ALA+++NHKEAE++RR RINSHL++LR LL CNSKTDK++LLAKVVQRVKELKQQT EIT+ ET+PSETDEI+VL+      G D R++FK S CCEDR +L+ DL+E L SL ++TL A+M T+GGRTRNVLVVAADKE H ++S+NFLQ
Sbjct:   38 YEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQ 191
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.776e-46
Identity = 85/135 (62.96%), Postives = 110/135 (81.48%), Query Frame = 1 
Query:  223 RALAAMKNHKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVLSTGGDYGSDGRLVFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVV 627
            +ALAA K+H EAE+RRRERIN+HL +LR++LP  +KTDKASLLA+V+Q VKELK++TS I+E   VP+E+DE+TV  T  +   DGR V KASLCCEDRSDL+PD+I+ L ++ LKTLKAE+ T+GGR +NVL V
Sbjct:  170 KALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFV 304
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.288e-40
Identity = 79/136 (58.09%), Postives = 110/136 (80.88%), Query Frame = 1 
Query:  223 RALAAMKNHKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVLSTGGDYGSDGRLVFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVVA 630
            +ALAA K+H EAE+RRRERIN+HL +LR++LP  +KTDKASLLA+V+Q +KELK+QTS+IT+   VP+E D++TV S+  D   +G LV +AS CC+DR+DL+ D+I  L SL L+TLKAE+AT+GGR +N+L ++
Sbjct:  128 KALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPTECDDLTVDSSYND--EEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLS 261
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.501e-33
Identity = 62/133 (46.62%), Postives = 96/133 (72.18%), Query Frame = 1 
Query:  220 DRALAAMKNHKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVL-STGGDYGSD-GRLVFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTR 612
            ++A +  ++H+ AEKRRR+RINSHL  LR L+P + K DKA+LLA V+++VKELKQ+ +E    + +P+E DE+TV   T  D+ S+   ++FKAS CCED+ + I ++I +L  L L+T++AE+ ++GGR R
Sbjct:   58 EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETIQAEIISVGGRMR 190
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: BH131_ARATH (Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.944e-18
Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 1 
Query:  196 ITPTPSHHDRALAAMKNHKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVLSTGGDYGSDGRLVFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVV 627
            +T   S  +    A K H +AE+RRR RINS    LRT+LP   K DKAS+L + V+   ELK+    + ++ T PS  D + +     D+ ++ R + +    C DR  L+ ++ E + ++  K ++AE+ T+GGRT+  L V
Sbjct:   79 VTKPKSKTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKM---VQDIPTTPSLEDNLRL-----DHCNNNRDLARVVFSCSDREGLMSEVAESMKAVKAKAVRAEIMTVGGRTKCALFV 214
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.064e-7
Identity = 41/166 (24.70%), Postives = 72/166 (43.37%), Query Frame = 1 
Query:  256 AEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKEL----KQQTSEITELETVPSETDEITVLSTGGDYGSD--------------------------------GRLVFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVVAADKEH 645
            +E+ RR+++N  L  LR+++P  +K DKAS++   +  ++ L    K+  +EI ELE+ P  +     LS   D+  D                                G      S+ C  R+D +  L E+  SL+LK L + + +  G   + + + AD+E 
Sbjct:   59 SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSS-----LSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEE 219
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=AIB PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 2.034e-7
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1 
Query:  244 NHKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVP-----SETDEITV 447
            NH EAE++RRE++N     LR+++P  SK DKASLL   +  +KEL Q+  +I E E V      SE++ ITV
Sbjct:  395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKEL-QEKVKIMEDERVGTDKSLSESNTITV 466
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: UNE10_ARATH (Transcription factor UNE10 OS=Arabidopsis thaliana OX=3702 GN=UNE10 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 4.449e-7
Identity = 22/55 (40.00%), Postives = 42/55 (76.36%), Query Frame = 1 
Query:  247 HKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITEL 411
            H ++E++RR++IN  +  L+ L+P +SKTDKAS+L +V++ +K+L+ Q S ++ +
Sbjct:  218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRM 272
[Close]
BLAST of Vigun01g105200.1 vs. DB:Swiss
Match: BMAL1_MOUSE (Aryl hydrocarbon receptor nuclear translocator-like protein 1 OS=Mus musculus OX=10090 GN=Arntl PE=1 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 9.242e-7
Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 1 
Query:  214 HHDRALAAMKNHKEAEKRRRERINSHLDELRTLLP-CNS---KTDKASLLAKVVQRVKELKQQTSEITELETVPS 426
            H  R   A + H + EKRRR+++NS +DEL +L+P CN+   K DK ++L   VQ +K L+  T+  TE    P+
Sbjct:   73 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT 147
The following BLAST results are available for this feature:
BLAST of Vigun01g105200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
BH106_ARATH1.975e-6968.24Transcription factor bHLH106 OS=Arabidopsis thalia... [more]
BH107_ARATH7.817e-6666.45Putative transcription factor bHLH107 OS=Arabidops... [more]
BH030_ARATH6.776e-4662.96Transcription factor bHLH30 OS=Arabidopsis thalian... [more]
BH032_ARATH1.288e-4058.09Transcription factor AIG1 OS=Arabidopsis thaliana ... [more]
BH051_ARATH5.501e-3346.62Transcription factor bHLH51 OS=Arabidopsis thalian... [more]
BH131_ARATH1.944e-1834.72Transcription factor bHLH131 OS=Arabidopsis thalia... [more]
BH035_ARATH1.064e-724.70Transcription factor bHLH35 OS=Arabidopsis thalian... [more]
AIB_ARATH2.034e-745.21Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Ar... [more]
UNE10_ARATH4.449e-740.00Transcription factor UNE10 OS=Arabidopsis thaliana... [more]
BMAL1_MOUSE9.242e-740.00Aryl hydrocarbon receptor nuclear translocator-lik... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..252
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 84..133
e-value: 8.5E-13
score: 58.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 82..127
e-value: 3.4E-12
score: 46.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 78..127
score: 15.967
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 81..130
e-value: 1.39864E-12
score: 59.1499
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 73..139
e-value: 9.3E-16
score: 59.3
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 73..135

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g105200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g105200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g105200.1; organism=Vigna unguiculata; type=mRNA; length=1817bp
TTGGGTCAGTCAAAAAGTGCAATCATAAGCATCACTTCACCTTCACCTTC
ACCACCACAAAATCTCTTAACTCTTCTCTTCCCTTCTTATTCCCCCTTCC
CTCTCACACCAACCCTATCTTAATCTTCTTCATGCACCACTTCGCCATGG
ACAACTCTCACCTTCTTCAATTCCTTCCAAAcaccaccaccaccaccgcc
gccaccaccaccaacaacaaccccttcttccacactgctccacacaccac
caacatcatgcaccaccaccaAACCCTCTCCAATAACTCCTCCTCCAATA
ACTTCTATCCCTTTCATGTCTCCCAAATTACCCCAACACCCTCCCACCAT
GATAGAGCCCTTGCTGCCATGAAGAACCACAAGGAAGCTGAGAAGAGAAG
GAGGGAGCGAATCAACTCCCACCTCGATGAGCTTCGCACTCTTCTCCCTT
GCAATTCCAAGACAGACAAGGCTTCGCTTCTGGCGAAGGTTGTGCAGCGA
GTGAAGGAGTTGAAGCAGCAGACGTCAGAGATAACGGAGCTGGAGACGGT
TCCGTCGGAAACCGACGAGATCACGGTGCTCTCGACCGGCGGGGACTACG
GCAGCGATGGGAGGCTGGTGTTCAAGGCCTCGCTGTGCTGCGAGGACCGC
TCCGACCTCATCCCGGATCTCATAGAAATCCTGAACTCGCTTCACCTGAA
AACCCTCAAAGCAGAAATGGCGACGCTGGGTGGAAGAACACGCAACGTTC
TGGTGGTGGCTGCAGACAAAGAACACAGCATCGAATCCATCAATTTCCTT
CAGAACTCGCTCAAGTCCTTGCTAGACAGGTCCAATTCCAGCGACAGATC
AAAACGTCGCCGTGGCCTAGACCGAAGGCTAATGTCTTAAGCGGacacac
acaaacacacacacaAATCTTGTATAACTAGACGTGCAAATGCATGCTTG
CAAGCATCGGTCTTAATGTGTTTGGTTATGTAAAGAGAGTTGAACTAAGA
TGATGGattacattatatgatattattatattataATTGTTtaggttgtt
attaaggtagttaggtaggtagttaggGTTTGTGTGGTGTTTGTTTGGAA
TGTTTGCATGTGAACTTAGTGTTGCATGTAAGTAGGAGAAACAGGATGGT
AAGAATCTGAGGGGTTTTGTTTAATTACGTGCTGTGCAAGTTGTGGCTTG
TGACAGTGAGGGAAAGGAGCCTGTCTGTTCTGTAAAAGCAATGCTTCTGT
GAGTTTCCAAGCTGTAGAAAATGGCATATTCGTTTCTCTTTCATGCTCTT
TCTTTCTCTCATATCTATCTGCTTTGTGACTGTATGTCGTTGTTTTTCCT
TTTGCTGAGCTTACACTGATTCTAAAGAAGCAACTGGGTGGGGAAACATG
GAATGCTTGTGTGTTGGGAACTGGGTTTTGGGTTGGATTGTTGCTGTAAT
TGATGCTGAGGTTTTTTAATCACAATCTTAGTTTTCTGATTAACTCTTTC
TTCAATACGTAAAGAATAAAGTTATGTGAGTATTATTACAGCAGTGTTTT
TGCGTGTGAGACAGTGAAATGACAAGGGGCTGCAAATGGACAGGGGTTTT
GGTCGATGGAAGTGGAAGAATGTGTTGTGTTTCCAAATCTTGCTTTTGGG
GAAGAAAAAGGAGAAAAGGTGTTGTGAGTGGTCGGAGAAAGAGGGCAAGG
TCATTGAAAGAATCAGAGGTAGTTCTGCTTCTGCTTCTGCATATGATGTT
AAAAGCCTTTTTAATTAATCTCACTCCATGTATTATTGATGGGGTGAGGA
ATATATTTATGCCAACC
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protein sequence of Vigun01g105200.1_Vu_IT97K-499-35_v1.1

>Vigun01g105200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g105200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g105200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=253bp
MHHFAMDNSHLLQFLPNTTTTTAATTTNNNPFFHTAPHTTNIMHHHQTLS
NNSSSNNFYPFHVSQITPTPSHHDRALAAMKNHKEAEKRRRERINSHLDE
LRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVL
STGGDYGSDGRLVFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLG
GRTRNVLVVAADKEHSIESINFLQNSLKSLLDRSNSSDRSKRRRGLDRRL
MS*
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mRNA from alignment at Vu01:27610810..27613152+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g105200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g105200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g105200.1; organism=Vigna unguiculata; type=mRNA; length=2343bp; location=Sequence derived from: Vu01:27610810..27613152+ (Vigna unguiculata
TTGGGTCAGTCAAAAAGTGCAATCATAAGCATCACTTCACCTTCACCTTC
ACCACCACAAAATCTCTTAACTCTTCTCTTCCCTTCTTATTCCCCCTTCC
CTCTCACACCAACCCTATCTTAATCTTCTTCATGCACCACTTCGCCATGG
ACAACTCTCACCTTCTTCAATTCCTTCCAAACACCACCACCACCACCGCC
GCCACCACCACCAACAACAACCCCTTCTTCCACACTGCTCCACACACCAC
CAACATCATGCACCACCACCAAACCCTCTCCAATAACTCCTCCTCCAATA
ACTTCTATCCCTTTCATGTCTCCCAAATTACCCCAACACCCTCCCACCAT
GATAGAGCCCTTGCTGCCATGAAGAACCACAAGGAAGCTGAGAAGAGAAG
GAGGGAGCGAATCAACTCCCACCTCGATGAGCTTCGCACTCTTCTCCCTT
GCAATTCCAAGGTATACACCAACCACACTCACACATCCATCACCATATCT
TACACTCCTTATACTCCTCAACATAATTATAACACTTTCAACTTCAATTC
CTAAGAACACCCTTATGTGACCTATGTAGCTGCAAACCTAACATATGTGT
TTCTTCAATATGTATGTCATTATTAAATTGATACTGTGCTTGTTTTTGAG
CAATTTGCAACCTTTTCCCACTCACTGTGTACGCACCTTGTTTTATTCTC
AAAGGTTGCATACTTTTTGACCAACAAAGCTAAATGGGCGTGTTTTACTT
GACTACACTTTAATTGCCATGAAATATGTATCTATGGATATGTACTTCGC
ATACATACAGCAACAGAACGAGATTAGGTTGTCGGAAAGAAACTCATAAA
ATCCAAAGTGTTACCTGCATTAGAATCTCATTTATTCATGTCATGTTTCA
AAAGGAAACCCCAGTGAGTTTGGGAAAGTGAGTTTGCTTTTACCAACATG
CGATATAATGGTTGTTTATAAATCTTTGGTTCTTCAGACAGACAAGGCTT
CGCTTCTGGCGAAGGTTGTGCAGCGAGTGAAGGAGTTGAAGCAGCAGACG
TCAGAGATAACGGAGCTGGAGACGGTTCCGTCGGAAACCGACGAGATCAC
GGTGCTCTCGACCGGCGGGGACTACGGCAGCGATGGGAGGCTGGTGTTCA
AGGCCTCGCTGTGCTGCGAGGACCGCTCCGACCTCATCCCGGATCTCATA
GAAATCCTGAACTCGCTTCACCTGAAAACCCTCAAAGCAGAAATGGCGAC
GCTGGGTGGAAGAACACGCAACGTTCTGGTGGTGGCTGCAGACAAAGAAC
ACAGCATCGAATCCATCAATTTCCTTCAGAACTCGCTCAAGTCCTTGCTA
GACAGGTCCAATTCCAGCGACAGATCAAAACGTCGCCGTGGCCTAGACCG
AAGGCTAATGTCTTAAGCGGACACACACAAACACACACACAAATCTTGTA
TAACTAGACGTGCAAATGCATGCTTGCAAGCATCGGTCTTAATGTGTTTG
GTTATGTAAAGAGAGTTGAACTAAGATGATGGATTACATTATATGATATT
ATTATATTATAATTGTTTAGGTTGTTATTAAGGTAGTTAGGTAGGTAGTT
AGGGTTTGTGTGGTGTTTGTTTGGAATGTTTGCATGTGAACTTAGTGTTG
CATGTAAGTAGGAGAAACAGGATGGTAAGAATCTGAGGGGTTTTGTTTAA
TTACGTGCTGTGCAAGTTGTGGCTTGTGACAGTGAGGGAAAGGAGCCTGT
CTGTTCTGTAAAAGCAATGCTTCTGTGAGTTTCCAAGCTGTAGAAAATGG
CATATTCGTTTCTCTTTCATGCTCTTTCTTTCTCTCATATCTATCTGCTT
TGTGACTGTATGTCGTTGTTTTTCCTTTTGCTGAGCTTACACTGATTCTA
AAGAAGCAACTGGGTGGGGAAACATGGAATGCTTGTGTGTTGGGAACTGG
GTTTTGGGTTGGATTGTTGCTGTAATTGATGCTGAGGTTTTTTAATCACA
ATCTTAGTTTTCTGATTAACTCTTTCTTCAATACGTAAAGAATAAAGTTA
TGTGAGTATTATTACAGCAGTGTTTTTGCGTGTGAGACAGTGAAATGACA
AGGGGCTGCAAATGGACAGGGGTTTTGGTCGATGGAAGTGGAAGAATGTG
TTGTGTTTCCAAATCTTGCTTTTGGGGAAGAAAAAGGAGAAAAGGTGTTG
TGAGTGGTCGGAGAAAGAGGGCAAGGTCATTGAAAGAATCAGAGGTAGTT
CTGCTTCTGCTTCTGCATATGATGTTAAAAGCCTTTTTAATTAATCTCAC
TCCATGTATTATTGATGGGGTGAGGAATATATTTATGCCAACC
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Coding sequence (CDS) from alignment at Vu01:27610810..27613152+

>Vigun01g105200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g105200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g105200.1; organism=Vigna unguiculata; type=CDS; length=759bp; location=Sequence derived from: Vu01:27610810..27613152+ (Vigna unguiculata
ATGCACCACTTCGCCATGGACAACTCTCACCTTCTTCAATTCCTTCCAAA
CACCACCACCACCACCGCCGCCACCACCACCAACAACAACCCCTTCTTCC
ACACTGCTCCACACACCACCAACATCATGCACCACCACCAAACCCTCTCC
AATAACTCCTCCTCCAATAACTTCTATCCCTTTCATGTCTCCCAAATTAC
CCCAACACCCTCCCACCATGATAGAGCCCTTGCTGCCATGAAGAACCACA
AGGAAGCTGAGAAGAGAAGGAGGGAGCGAATCAACTCCCACCTCGATGAG
CTTCGCACTCTTCTCCCTTGCAATTCCAAGACAGACAAGGCTTCGCTTCT
GGCGAAGGTTGTGCAGCGAGTGAAGGAGTTGAAGCAGCAGACGTCAGAGA
TAACGGAGCTGGAGACGGTTCCGTCGGAAACCGACGAGATCACGGTGCTC
TCGACCGGCGGGGACTACGGCAGCGATGGGAGGCTGGTGTTCAAGGCCTC
GCTGTGCTGCGAGGACCGCTCCGACCTCATCCCGGATCTCATAGAAATCC
TGAACTCGCTTCACCTGAAAACCCTCAAAGCAGAAATGGCGACGCTGGGT
GGAAGAACACGCAACGTTCTGGTGGTGGCTGCAGACAAAGAACACAGCAT
CGAATCCATCAATTTCCTTCAGAACTCGCTCAAGTCCTTGCTAGACAGGT
CCAATTCCAGCGACAGATCAAAACGTCGCCGTGGCCTAGACCGAAGGCTA
ATGTCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity