Vigun01g110000.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP1L_ARATH (Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 OS=Arabidopsis thaliana OX=3702 GN=AOP1.2 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.072e-63 Identity = 122/315 (38.73%), Postives = 176/315 (55.87%), Query Frame = 1 Query: 22 ELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIMGLQE-NHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKYRTPETG-----EKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMNATKTRYSMGLFSFSGDK-IMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKEKIKDPYSRIEAYCG 945 +L V+DF+D ++PG+ W V +ALE GCF A +D++ EL SV AME+LF LP+ TK + S K FHGY LYESLGIDD L+ F + N E+I+ +++ L ELD M +RM+ ES+G++ + S+ YL R MKY +P E LG+ SHTD I++I+HQ ++GLE+K KD +WI V S +VM GD+ NGR+ HRV M KTRYS GLFS I+ P+E+V+++HP +K F++ ++L F+ E + S + A+ Sbjct: 13 QLPVIDFSDQNLKPGSSKWDEVKADVLKALEDYGCFEAFFDKLSVELNRSVFEAMEDLFELPIPTKQRNVSSKPFHGYLCH----NLYESLGIDDANVLEKVNDFTQQLWPDHGNKSISETIHLFSEQLVELDLMVRRMIMESFGIE-NYIDEHLNSTYYLTRLMKYTSPPDDDDDDEETKLGLRSHTDKNIITILHQY-QVDGLEVKTKDDKWIKVKPSQDSVLVMVGDSLCALLNGRLHSPYHRVIMTGKKTRYSTGLFSIPKTGVIIDSPEELVDKEHPRIFKP-FEYTDFLHFFQTEAGRIAQSALHAFAA 320
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP1C_ARATH (Probable 2-oxoglutarate-dependent dioxygenase AOP1 OS=Arabidopsis thaliana OX=3702 GN=AOP1 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.524e-63 Identity = 121/316 (38.29%), Postives = 176/316 (55.70%), Query Frame = 1 Query: 22 ELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIMGLQE-NHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKYRTPETG------EKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMNATKTRYSMGLFSFSGDK-IMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKEKIKDPYSRIEAYCG 945 +L V+DF+D ++PG+ W V +ALE GCF A +D++ EL SV AME+LF LP+ TK + S K FHGY LYESLGI+D L+ F + N E+I+ +++ L ELD M +RM+ ES+G++ + S+ YL R MKY +P E LG+ SHTD I++I+HQ ++GLE+K KD +WI V S +VM GD+ NGR+ HRV M KTRYS GLFS I+ P+E+V+++HP +K F++ ++L F+ E + S + A+ Sbjct: 13 QLPVIDFSDQNLKPGSSKWDEVTADVLKALEDYGCFEASFDKLSVELNRSVFEAMEDLFELPIPTKQRNVSSKPFHGYLCH----NLYESLGINDANVLEKVNDFTQQLWPDHGNKSISETIHLFSEQLVELDLMVRRMIMESFGIE-NYIDEHLNSTYYLTRLMKYTSPPDDDDDDDEETKLGLRSHTDKNIITILHQY-QVDGLEVKTKDDKWIKVKPSQDSVLVMVGDSLCALLNGRLHSPYHRVIMTGKKTRYSTGLFSIPKTGVIIDSPEELVDKEHPRIFKP-FEYTDFLHFFQTEAGRIAQSALHAFAA 321
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP1V_ARATH (Probable 2-oxoglutarate-dependent dioxygenase AOP1 (Fragment) OS=Arabidopsis thaliana OX=3702 GN=AOP1 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 3.652e-62 Identity = 119/300 (39.67%), Postives = 173/300 (57.67%), Query Frame = 1 Query: 22 ELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIMGLQE-NHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKYRT----PETGEKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMNATKTRYSMGLFSFSGDK-IMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKE 903 +L V+DF+D ++PG+ W V +ALE GCF A +D++ EL SV AME+LF LP+ TK + S KLFHGY LYESLGI+D L+ F + N E+I+ +++ L ELD M +RM+ ES+G++ + + S+ YL R MKY + + E LG+ SHTD I++I+HQ ++GLE+K KD +WI V S +VM GD+ NGR+ HRV M KTRYS GLFS I+ P+E+V+++HP +K F++ ++L F+ E Sbjct: 6 QLPVIDFSDQNLKPGSSKWDEVTADVLKALEDYGCFEASFDKLSVELNRSVFEAMEDLFELPIPTKQRNVSSKLFHGYLCH----NLYESLGINDANVLEKVNDFTQQLWPDHGNKSISETIHLFSEQLVELDLMVRRMIMESFGIE-KYIDEHLNSTYYLTRLMKYTSPPDDDDDEETKLGLRSHTDKNIITILHQY-QVDGLEVKTKDDKWIKVKPSQDSVLVMVGDSLCALLNGRLHSPYHRVIMTGKKTRYSTGLFSIPKTGVIIDSPEELVDKEHPRIFKP-FEYTDFLHFFQTE 298
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP2V_ARATH (2-oxoglutarate-dependent dioxygenase AOP2 OS=Arabidopsis thaliana OX=3702 GN=AOP2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.834e-29 Identity = 66/186 (35.48%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 22 ELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIM--GLQENHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKYRTPETGEKDLGMHSHTDL 573 +L +++ D T+EPG+ W + VR+ALE GCF A YD++ EL +S++ MEELF+LPVETK + K + GY L ESLGI + L+ +F + N ++I +A+ L E+D M +RMV ES+G++ + ++S++Y +R MKY P G+ + + + DL Sbjct: 7 QLPLINLADKTLEPGSSKWAEVRSDVRKALEDFGCFEASYDKVSLELQESIMKTMEELFALPVETKQRNVCPKPYVGYLNHN---NLSESLGISNANILENVNEFTQQLWPDGDGNENISKTIQLFAEKLVEIDVMVRRMVMESFGIE-KYIDDHLKSTEYRMRLMKYIAPPEGDANTTVDDYADL 188 HSP 2 Score: 94.7449 bits (234), Expect = 1.804e-20 Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 538 EKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMNATK-TRYSMGLFSF-SGDKIMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKEKIKDPYSRIEAYCGIS 951 EK LG+ HTD + +++ Q + + GLE+K KD +WI V S + F+V+AGD+ NGRIR HRV + K TRY+ +F+ D +++ P E+V+E+HP ++ FD+ + FY E + ++AYC +S Sbjct: 293 EKKLGLPCHTDKNLFTVLFQ-HEIEGLEVKTKDEKWIRVKPSPNTFIVIAGDSLCALMNGRIRAPYHRVRVTEKKRTRYTAAIFTCPKPDYVIEAPKELVDEKHPRLFRP-FDYRDLFTFYHSEAGRKIQYTLQAYCAVS 430
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP2L_ARATH (2-oxoglutarate-dependent dioxygenase AOP2 OS=Arabidopsis thaliana OX=3702 GN=AOP2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.004e-28 Identity = 65/186 (34.95%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 22 ELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIMGLQ--ENHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKYRTPETGEKDLGMHSHTDL 573 +L +++ D T+EPG+ W + VR+AL+ GCF A YD++ EL +S++ MEELF+LPVETK + K + GY L ESLGI + L+ +F + N ++I +A+ L E+D M +RMV ES+G++ + ++S++Y +R MKY P G+ + + + DL Sbjct: 7 QLPLINLADKTLEPGSSKWAEVRSDVRKALQDFGCFEASYDKVSLELQESIMKTMEELFALPVETKQRNVCPKPYVGYLNHN---NLSESLGISNANILENINEFTQQLWPHGDGNENISKTIQLFAEKLVEIDVMVRRMVMESFGIE-KYIDDHLKSTEYRMRLMKYIAPPEGDANTTVDDYADL 188 HSP 2 Score: 94.7449 bits (234), Expect = 1.787e-20 Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 538 EKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMNATK-TRYSMGLFSF-SGDKIMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKEKIKDPYSRIEAYCGIS 951 EK LG+ HTD + +++ Q + + GLE+K KD +WI V S + F+V+AGD+ NGRIR HRV + K TRY+ +F+ D +++ P E+V+E+HP ++ FD+ + FY E + ++AYC +S Sbjct: 293 EKKLGLPCHTDKNLFTVLFQ-HEIEGLEVKTKDEKWIRVKPSPNTFIVIAGDSLCALMNGRIRAPYHRVRVTEKKRTRYTAAIFTCPKPDYVIEAPKELVDEKHPRLFRP-FDYRDLFTFYHSEAGRKIQYTLQAYCAVS 430
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP3C_ARATH (2-oxoglutarate-dependent dioxygenase AOP3 OS=Arabidopsis thaliana OX=3702 GN=AOP3 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 7.612e-26 Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 1 MGSQTESELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIMGLQENHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKY 519 MGS +L ++ +D T++PG+ W + VR+ALE GCF A+ D++ EL SVL AM+ELF+LP E K + K F GY L ES GI D L+ +F + + N + I YA+ L ELD M +R++ ESYG++ + S+ Y +R MKY Sbjct: 1 MGS-CSPQLPLICLSDQTLKPGSSKWVKVRSDVRKALEDYGCFEAKIDQVSMELQGSVLKAMQELFALPTEAKQRNVCPKPFTGYLSHN---GLSESFGIKDANILEKAHEFTQQLWPEGNKSISKMIQLYAEKLAELDMMVRRLILESYGIEYF-IDEHLNSTYYRMRLMKY 168 HSP 2 Score: 98.9821 bits (245), Expect = 4.880e-22 Identity = 54/141 (38.30%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 538 EKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMN-ATKTRYSMGLFSFSGDK-IMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKEKIKDPYSRIEAYCGISS 954 + +LG+ SHTD ++ I++Q + ++GLE+K K+G+WI V + + +V+AGDA NGRI HRV + KTRY+ LFS + I+ P E+V+E+HP +K FD + FY E + S ++A+CG+S+ Sbjct: 271 DAELGLPSHTDKSLTGIIYQ-HQIDGLEVKTKEGKWIRVKPAPNTVIVIAGDALCALMNGRIPSPYHRVRVTEKKKTRYAAALFSNPKEGYIIDSPKELVDEKHPRAFKP-FDFVDLFNFYHTEAGRRAPSTLQAFCGVSA 409
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP3V_ARATH (2-oxoglutarate-dependent dioxygenase AOP3 OS=Arabidopsis thaliana OX=3702 GN=AOP3 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.574e-25 Identity = 66/173 (38.15%), Postives = 96/173 (55.49%), Query Frame = 1 Query: 1 MGSQTESELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIMGLQENHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKY 519 MGS +L ++ +D T++PG+ W + VR+ALE GCF A+ D++ EL SVL AM+ELF+LP E K + K F GYF L ES GI D L+ +F + E ++ + I YA+ L ELD M +R++ ESYG++ + S+ Y +R MKY Sbjct: 1 MGS-CSPQLPLICLSDQTLKPGSSKWVKVRSDVRKALEDYGCFEAKIDQVSMELQGSVLKAMQELFALPTEAKQRNVCPKPFAGYFSHN---GLSESFGIKDANILEKAHEFTQQL-WPEGNKSIKMIQLYAEKLAELDMMVRRLILESYGIEYF-IDEHLNSTYYRMRLMKY 167 HSP 2 Score: 96.2857 bits (238), Expect = 5.036e-21 Identity = 53/141 (37.59%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 538 EKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMN-ATKTRYSMGLFSFSGDK-IMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKEKIKDPYSRIEAYCGISS 954 + +LG+ SHTD ++ I++Q + ++GLE+K K+G+WI V + + + +AGDA NGRI HRV + KTRY+ LFS + I+ P E+V+E+HP +K FD + FY E + S ++A+CG+S+ Sbjct: 270 DAELGLPSHTDKSLSGIIYQ-HQIDGLEVKTKEGKWIRVKPAPNTVIFIAGDALCALMNGRIPSPYHRVRVTEKKKTRYAAALFSNPKEGYIIDSPKELVDEKHPRAFKP-FDFVDLFNFYHTEAGRRAPSTLQAFCGVSA 408
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP3L_ARATH (2-oxoglutarate-dependent dioxygenase AOP3 OS=Arabidopsis thaliana OX=3702 GN=AOP3 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.638e-25 Identity = 66/173 (38.15%), Postives = 96/173 (55.49%), Query Frame = 1 Query: 1 MGSQTESELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIMGLQENHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKY 519 MGS +L ++ +D T++PG+ W + VR+ALE GCF A+ D++ EL SVL AM+ELF+LP E K + K F GYF L ES GI D L+ +F + E ++ + I YA+ L ELD M +R++ ESYG++ + S+ Y +R MKY Sbjct: 1 MGS-CSPQLPLICLSDQTLKPGSSKWVKVRSDVRKALEDYGCFEAKIDQVSMELQGSVLKAMQELFALPTEAKQRNVCPKPFAGYFSHN---GLSESFGIKDANILEKAHEFTQQL-WPEGNKSIKMIQLYAEKLAELDMMVRRLILESYGIEYF-IDEHLNSTYYRMRLMKY 167 HSP 2 Score: 100.138 bits (248), Expect = 1.798e-22 Identity = 54/141 (38.30%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 538 EKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMNA-TKTRYSMGLFSFSGDK-IMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKEKIKDPYSRIEAYCGISS 954 + +LG+ SHTD ++ I++Q + ++GLE+K K+G+WI V + + +V+AGDA NGRI HRV + KTRY+ LFS+ + I+ P E+V+E+HP +K FD + FY E + S ++A+CG+S+ Sbjct: 270 DAELGLPSHTDKSLSGIIYQ-HQIDGLEVKTKEGKWIRVKPAPNTVIVIAGDALCALMNGRIPSPYHRVRVTERKKTRYAAALFSYPKEGYIIDSPKELVDEKHPRAFKP-FDFVDLFNFYHTEAGRRAPSTLQAFCGVSA 408
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: AOP2C_ARATH (Probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 OS=Arabidopsis thaliana OX=3702 GN=AOP2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.960e-23 Identity = 64/191 (33.51%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 22 ELHVVDFTDATMEPGTDAWFSACTLVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGCQKFAHIMGLQ--ENHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMIESSDYLLRCMKYRTPETG----EKDLGMHSHTDLT 576 +L +++ D T+EPG+ W + VR+ALE GCF A YD++ EL +S++ MEELF+LPVETK + K + GY L ESLGI + L+ +F + N ++I +A+ L E+D M +RMV ES+G++ + D L+ Y T E E ++G+ + D++ Sbjct: 7 QLPLINLADKTLEPGSSKWAEVRSDVRKALEDFGCFEASYDKVSLELQESIMKTMEELFALPVETKQRNVCPKPYVGYLNHN---NLSESLGISNANILENINEFTQQLWPHGDGNENISKTIQLFAEKLVEIDVMVRRMVMESFGIE--------KYIDDHLKSTAYATDELNIVGVEPNVGVKVNADIS 186 HSP 2 Score: 94.7449 bits (234), Expect = 1.253e-20 Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 538 EKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGEWIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMNATK-TRYSMGLFSF-SGDKIMQIPDEVVNEQHPLRYKSIFDHYEYLRFYDKEKIKDPYSRIEAYCGIS 951 EK LG+ HTD + +++ Q + + GLE+K KD +WI V S + F+V+AGD+ NGRIR HRV + K TRY+ +F+ D +++ P E+V+E+HP ++ FD+ + FY E + ++AYC +S Sbjct: 260 EKKLGLPCHTDKNLFTVLFQ-HEIEGLEVKTKDEKWIRVKPSPNTFIVIAGDSLCALMNGRIRAPYHRVRVTEKKRTRYTAAIFTCPKPDYVIEAPKELVDEKHPRLFRP-FDYRDLFTFYHSEAGRKIQYTLQAYCAVS 397
BLAST of Vigun01g110000.1 vs. DB:Swiss
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana OX=3702 GN=GA3OX3 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.523e-19 Identity = 72/271 (26.57%), Postives = 122/271 (45.02%), Query Frame = 1 Query: 94 LVREALEQNGCFVARYDRIGKELCDSVLCAMEELFSLPVETKAQKTSDKLFHGYFGQVPWLPLYESLGIDDPLTLQGC--QKFAHIMGLQENHRFCESINEYAKLLGELDHMAKRMVFESYGVKMQGCKRMI--------ESSDYLLRCMKYRTPETGEKDLGMHSHTDLTIVSIVHQLNNLNGLEIKLKDGE---WIGVDASFSLFVVMAGDAFNVWSNGRIRPCEHRVTMNATKTRYSMGLFSFSGDKIMQIPDEVVNEQHPLRYKSIF 867 L+R+A E+ G F + L +V C M+ LFSLP+ K +G V Y+ L + ++ G ++ A ++ ++ FC + EY K + +L H M+ S G+ + ++ +S L+ Y +G+ HTD ++++I++Q N+ GLEI+ E WIGV+ VV+ GD ++ SNG+ R HR +N T R S F+ K +QI ++ HP Y+ + Sbjct: 60 LLRQACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQ-GNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFA-GPPKNLQIGPLTSDKNHPPIYRRLI 328 The following BLAST results are available for this feature:
BLAST of Vigun01g110000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g110000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g110000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g110000.1; organism=Vigna unguiculata; type=mRNA; length=1276bpback to top protein sequence of Vigun01g110000.1_Vu_IT97K-499-35_v1.1 >Vigun01g110000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g110000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g110000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=320bpback to top mRNA from alignment at Vu01:28335507..28337000- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g110000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g110000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g110000.1; organism=Vigna unguiculata; type=mRNA; length=1494bp; location=Sequence derived from: Vu01:28335507..28337000- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:28335507..28337000- >Vigun01g110000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g110000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g110000.1; organism=Vigna unguiculata; type=CDS; length=960bp; location=Sequence derived from: Vu01:28335507..28337000- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|