Vigun01g135700.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 3.630e-44 Identity = 117/281 (41.64%), Postives = 153/281 (54.45%), Query Frame = 1 Query: 4 LLRNRSRAVSKPG-----LMADHSSQQSPTQNYAKTIPSLFGSPKFRDFTNKCLSSGTEA---LRSPTSILDARALSPFAFANPFSTPPNKTSPPSRTSWDKPDSKGLALALVGAFKD-DDNPIHDSSETNKGNVL---LRVKIPFESQTCGDDFGSKPKDSKNSSGSESFAKDDCVSTSVRALSWSEMELSEEYTCVISHGPNPKTTHIFNNCIVVE-TYYSLPQNQNS-HSATSANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLDGIE 804
+LRN+ RA LMAD P N PSLF SPKFR FT+K + + ++ L SPTSIL+A S F+ NP + + P+ + PD GLA KD D N H NK + LRV+IP + DFG+K CV T V L+ SE++ +E+YT VISHGPNP THIF+N + VE T S+P Q + + ++ +FLS C TCKK+LDQ +DI+IYRGEK FCS ECR+QEM+LD +E
Sbjct: 1 MLRNKPRAAVTTKKQTSLLMADQPPPPKP--NTCHCSPSLFSSPKFRFFTSKMMMTPFDSDFSLVSPTSILEANP-SIFSSKNPKPVSYFEPTIPNPQRFHSPDVFGLA----DLVKDGDSNRDHSRKPVNKMVLFGSKLRVQIPSSA-----DFGTK-----TGIRYPPCQLSPCVQTKV--LAVSEIDQTEDYTRVISHGPNPTITHIFDNSVFVEATPCSVPLPQPAMETKSTESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQME 262
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ8_ARATH (FCS-Like Zinc finger 8 OS=Arabidopsis thaliana OX=3702 GN=FLZ8 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.965e-38 Identity = 105/278 (37.77%), Postives = 147/278 (52.88%), Query Frame = 1 Query: 4 LLRNRSRAVSKPGLMADHSSQQSPTQNYAKTIPSLFGS-PKFRDFTNKCLSSGTEALRSPTSILDARALSPFAFANPFSTPPNKTSPPSRTSWDKPDSKGLALALVGAFKDDDNPIHDSSETNKGNVL----LRVKIPFESQTCGDDFGSKPKDSKNSS---GSESFAKDDCVSTSVRALSWSEMELSEEYTCVISHGPNPKTTHIFNNCI------VVETYYSLPQNQ-NSHSATSANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVL 792
+L+ RSR SK LMA+ + Q+ Q+ P LF + F+ FT +A+ SPTSILD + S NPF + KT P + K + K + LA+V + D+ P G +L LR+++P +S DFG K ++S+ + GSES + + S+MELSE+YTCV HGPNP+T HIF+NCI VV S P N+ +S + +FLS C CKK L DIF+YRG++AFCS ECR EM++
Sbjct: 1 MLKKRSR--SKQALMAETNQSQNQKQSKTTPFPRLFTAFSSFKSFTE------NDAVASPTSILDTKPFS--VLKNPFGSDNPKTQEPE--TRLKLEPKRIGLAIVDSLIQDETP---EPGPRSGTILFGSQLRIRVP-DSPISSSDFGIKTRNSQPETKKPGSESGLGSPRIISGY--FPASDMELSEDYTCVTCHGPNPRTIHIFDNCIVESQPGVVFFRSSDPVNESDSDYSPPDSFLSCCCNCKKSLGPRDDIFMYRGDRAFCSSECRSIEMMM 260
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ10_ARATH (FCS-Like Zinc finger 10 OS=Arabidopsis thaliana OX=3702 GN=FLZ10 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.494e-20 Identity = 96/313 (30.67%), Postives = 139/313 (44.41%), Query Frame = 1 Query: 46 MADHSSQQSPT-QNYAKTIPSL--FGSPKFRD--FTNKCLSSGTEALRSPTSILDARALSPFAFANPFSTPPNKTSPPSRT-SWDKPDSKGLALALVGAFKDDDN---------PIHDSSETNKGNVLLRVK------------------IPFESQTCGDDF-------GSKPKDSKNSSGSESFAKDD--CVST-----SVRALSWSEMELSEEYTCVISHGPNPKTTHIFNNCIVVETYYSLPQN---QNSHSATSA----------------NFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEM 786
M+ HS+ Q T +Y T P L S K F KC S E+ SPTS LD R S NPF+ +++ + SWD S + L++V + DD + P DS G+++ + IP G D S D+ SG+E+F+ ++ C T S+ + S+ME+SE+YTCVISHGPNPKTTH + + ++ +N +N + A +FLSFC+ C K L +DI++Y G KAFCS ECR +E+
Sbjct: 1 MSQHSNYQMTTASDYYSTKPVLSAIRSHKLISSVFEGKC-PSDYESAWSPTSPLDFRLFS--TLGNPFAASSSRSIWRGKQRSWD---SGKVGLSIVHSLVDDHHTDSSATIVLPSPDSKNIIFGSLMRSGQKPHLLSQPFTKALMPKDVIPNAVFEIGHDVIDVLELRKSGSVDAAYCSGAENFSVNNNACQVTKQDPGSLNGGTESDMEISEDYTCVISHGPNPKTTHFYGDQVMESVEREELKNRCCKNEKESIFAVAPLDLTTPVDVLPPKDFLSFCYGCSKKLGMGEDIYMYSGYKAFCSSECRSKEI 307
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ11_ARATH (FCS-Like Zinc finger 11 OS=Arabidopsis thaliana OX=3702 GN=FLZ11 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.777e-17 Identity = 81/266 (30.45%), Postives = 128/266 (48.12%), Query Frame = 1 Query: 139 NKCLSSGTEALRSPTSILDARALSPFAFANPFSTPPNKTSPPSRTSWDKPDSKGLALALVGAFKDDDNPIHD----------SSETNKGNVLLRVKIPFESQTCGDDF-GSKPKDSKNSSGSE-------SFAKDDCVSTSVRALSWSEM------------------ELSEEYTCVISHGPNPKTTHIFNNCIVVETYYSLPQNQNSHSA-----TSANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLDGIENLE 813
NKC+S ++ +RSP S L+ R LS A + F P + P +K + L++V + DD + D SE + L + +S+ ++ G + NSS +E SF+ +DC+ + R LS S++ + E+YTC+I+HGPNPKTTHI+ + ++ L ++++ S NFL C+ C K L DI++YR EK+FCS ECR +EM++D E+LE
Sbjct: 51 NKCISD-SDFVRSPKSPLEFRVLSTMA-DSFFLRSPRSSLTAHLNCCCGPAAK-VGLSIVDSLGDDRCLLPDIVFGPALRIKCSEVMDKHPKLLFPVANKSKKIENERSGVVFEIGDNSSETEPVGLRNRSFSANDCLRKT-RVLSRSKLGQEGDFPGSGSDNAFSSEDDMEDYTCIIAHGPNPKTTHIYGDRVLECHKNELKGDEDNKEKFGSVFPSDNFLGICNFCNKKLGGGDDIYMYR-EKSFCSEECRSEEMMIDE-EDLE 310
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ18_ARATH (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.064e-11 Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 604 NCIVVETYYSLPQNQNSHSATSANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLDGIENLE 813
N IV+++ SL N+++ + + FL CH C K L Q KD+++YRG+ FCSRECR +M++D + LE
Sbjct: 20 NNIVIKS--SLRLNRSNPNISELCFLKTCHLCNKQLHQDKDVYMYRGDLGFCSRECRESQMLIDDRKELE 87
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ17_ARATH (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.064e-11 Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 604 NCIVVETYYSLPQNQNSHSATSANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLDGIENLE 813
N IV+++ SL N+++ + + FL CH C K L Q KD+++YRG+ FCSRECR +M++D + LE
Sbjct: 20 NNIVIKS--SLRLNRSNPNISELCFLKTCHLCNKQLHQDKDVYMYRGDLGFCSRECRESQMLIDDRKELE 87
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ5_ARATH (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.734e-8 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 1 Query: 646 QNSHSAT-SANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLD 795
Q HS+ S +FL C CK+ L +DI++YRG++AFCS ECR Q++ +D
Sbjct: 67 QRRHSSDYSEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVD 117
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ3_ARATH (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 2.350e-8 Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 Query: 673 NFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLD 795
+FL C C+KHL DIF+YRG+KAFCS ECR +++ D
Sbjct: 15 HFLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESD 55
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ15_ARATH (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.369e-8 Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 670 ANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLDGIENLEFE 819
+ FL C C++ L KDI++Y+G++AFCS ECR ++M++D E+L E
Sbjct: 66 SGFLEHCFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDEEESLRRE 115
BLAST of Vigun01g135700.1 vs. DB:Swiss
Match: FLZ6_ARATH (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 1.665e-7 Identity = 20/43 (46.51%), Postives = 30/43 (69.77%), Query Frame = 1 Query: 667 SANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRECRHQEMVLD 795
+ +FL C C++ L +DI++YRG+KAFCS ECR ++M D
Sbjct: 86 AGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQD 128 The following BLAST results are available for this feature:
BLAST of Vigun01g135700.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g135700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g135700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g135700.1; organism=Vigna unguiculata; type=mRNA; length=2105bpback to top protein sequence of Vigun01g135700.1_Vu_IT97K-499-35_v1.1 >Vigun01g135700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g135700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g135700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=279bpback to top mRNA from alignment at Vu01:31556541..31558926- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g135700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g135700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g135700.1; organism=Vigna unguiculata; type=mRNA; length=2386bp; location=Sequence derived from: Vu01:31556541..31558926- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:31556541..31558926- >Vigun01g135700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g135700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g135700.1; organism=Vigna unguiculata; type=CDS; length=837bp; location=Sequence derived from: Vu01:31556541..31558926- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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