Vigun01g138600.1

Transcript Overview
NameVigun01g138600.1
Unique NameVigun01g138600.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2005
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:31885755..31889990 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR031Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR035Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL193Pisum sativum Cameor genome v1aPisum sativum
psvuL197Pisum sativum Cameor genome v1aPisum sativum
psvuL530Pisum sativum Cameor genome v1aPisum sativum
crvuL221Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL323Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL571Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL163Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL259Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0241Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0352Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0475Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0808Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0652Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0654Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0779Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0870Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1076Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1152Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL207Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL325Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL341Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL345Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR020Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR050Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR052Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL351Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL329Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL239Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL579Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL585Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL438Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL756Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL759Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR023Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL142Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL219Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL226Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL269Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL276Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL285Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL337Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL159Cicer arietinum
carvuL243Cicer arietinum
carvuL249Cicer arietinum
ccavuL188Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR014Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR018Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR002Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR059Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL542Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL550Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL324Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL546Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL552Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL492Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR022Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_07318.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Tiffany.R1.5g097480.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g051840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_000987Cajanus cajan Asha genome v1.0Cajanus cajan
Phvul.007G176900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat03G0214500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
XM_058884263.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_04G02177.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan02g124800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cc_v2.0_03549.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Psat06G0160600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat3g060720.1Pisum sativum Cameor genome v1aPisum sativum
PvulFLAVERTChr01.1020Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_014640816.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
XM_058914953.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_07790Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_24573Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
PvulFLAVERTChr07.1001138Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigan.08G228300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va02G043840.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg32602.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va03G069630.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.08G192600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_014659214.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_09521.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
jg1924.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.001G156400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.04G192700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cr_06039.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr07.2577Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_07555.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_029702Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_004495091.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004493679.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
evm.model.Chr01.1351Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.5g121240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_01967Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_12194Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.04G304600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.3g062400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_08G01761.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan10g097900Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun07g104000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun07g104000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun01g138600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g138600Vigun01g138600_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g138600.1Vigun01g138600.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g138600.1_Vu_IT97K-499-35_v1.1Vigun01g138600.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g138600.1.v1.1.five_prime_UTR.1Vigun01g138600.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g138600.1.v1.1.CDS.1Vigun01g138600.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g138600.1.v1.1.CDS.2Vigun01g138600.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g138600.1.v1.1.CDS.3Vigun01g138600.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g138600.1.v1.1.CDS.4Vigun01g138600.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g138600.1.v1.1.CDS.5Vigun01g138600.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g138600.1.v1.1.CDS.6Vigun01g138600.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g138600.1.v1.1.three_prime_UTR.1Vigun01g138600.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun01g138600.1 vs. DB:Swiss
Match: UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 6.474e-110
Identity = 215/308 (69.81%), Postives = 239/308 (77.60%), Query Frame = 1 
Query:    4 ANNPSD-----TPADDFLEQILGLPTFASGDSGLAAADVGLSGTTSPAPMMLQLNSADPNAHLTGAA------FHAPVYQLGLSLDQGKG-GFMKPEEASASGKRYRDDVVDGRA---KNVFHGQPMPTTMPSXXXXXXXXX-XXXXXXXXXTDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VEEEGGEGARN-RPAWDKLSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDSSSIVKPETNPP 873
            +NNP D     TP+DDF EQILGLP F++  +   +   G  G  +P PMMLQL S +  +H+ G        FH  ++ LGLSLDQGKG GF++PE    SGKR+ DDVVD R    K VFHGQPM    PSAPH P     RVRARRGQATDPHSIAERLRRERIAERIRALQELVP+VNKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD+PLSS VE+E GEG R  +PAW+K SNDGTERQVAKLMEENVGAAMQ LQSKALC+MPISLA AIY SQPPD+SS+VKPE NPP
Sbjct:    3 SNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAP-PMMLQLGSGEEGSHMGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309
[Close]
BLAST of Vigun01g138600.1 vs. DB:Swiss
Match: BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.367e-92
Identity = 198/314 (63.06%), Postives = 221/314 (70.38%), Query Frame = 1 
Query:    1 MANN---PSDT-----PADDFLEQILGLPTFASGDSGLAAADVGLSGTTSPAPMMLQLNSADPNAH--------LTGAAFHAPVYQLGLSLDQGKG-GFMKPEEASASGKRYRDDVVDGRA---KNVFHGQPMPTTMPSXXXXXXXXXXXXXXXX-XXTDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSVEEEGGEGARNRPAWDKLSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPD-SSSIVKPETNPP 873
            MANN   P D+     P DDF EQILG     S  SG + + +   G   P PMMLQL S +   H             FH  ++ LGLSLDQGKG GF+KP+E   +GKR++DDV+D R    K +FHGQPM    P  PH  +        R  QATDPHSIAERLRRERIAERIR+LQELVP+VNKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVT++PL SSVE+E       +  W+K SNDGTERQVAKLMEENVGAAMQ LQSKALCIMPISLA AIY SQPPD SSSIVKPE NPP
Sbjct:    1 MANNNNIPHDSISDPSPTDDFFEQILG----LSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRFQDDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVEDE------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPP 301
[Close]
BLAST of Vigun01g138600.1 vs. DB:Swiss
Match: BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana OX=3702 GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 8.024e-37
Identity = 91/161 (56.52%), Postives = 116/161 (72.05%), Query Frame = 1 
Query:  412 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGARNRPAWDKLSNDG------------TERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDSSSIVKP 858
            TDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI++YV+FL+LQVKVLSMSRLGGAG+V P +  +   S E  G   A   P  + L+ +G            TE++VAKLMEE++G+AMQ+LQ K LC+MPISLA+AI  S      S+  P
Sbjct:  107 TDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGL---SAEAGGRLNALTAPC-NGLNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFNP 263
[Close]
BLAST of Vigun01g138600.1 vs. DB:Swiss
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana OX=3702 GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.031e-36
Identity = 88/148 (59.46%), Postives = 109/148 (73.65%), Query Frame = 1 
Query:  412 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGARNRPAWDKLSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDSSSIVK 855
            TDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLGGA + +        S + E+ G    N  +  +     TE QVAKLMEE++G+AMQ+LQ K LC+MPISLA+ I  +  P  S  VK
Sbjct:  138 TDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASAS--------SQISEDAGGSHENTSSSGEAKM--TEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVK 275
[Close]
BLAST of Vigun01g138600.1 vs. DB:Swiss
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana OX=3702 GN=BHLH66 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.006e-34
Identity = 91/143 (63.64%), Postives = 110/143 (76.92%), Query Frame = 1 
Query:  412 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDI-----PLSSVEEEGGEGARNRPAWDKLSNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLASAI 816
            TDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLGGA +V+  +++        SS    G + A N       SND    TE QVAKLMEE++G+AMQ+LQ K LC+MPISLA+AI
Sbjct:  146 TDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGN-------SNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 281
The following BLAST results are available for this feature:
BLAST of Vigun01g138600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
UNE12_ARATH6.474e-11069.81Transcription factor UNE12 OS=Arabidopsis thaliana... [more]
BH007_ARATH2.367e-9263.06Transcription factor bHLH7 OS=Arabidopsis thaliana... [more]
BH082_ARATH8.024e-3756.52Transcription factor bHLH82 OS=Arabidopsis thalian... [more]
BH069_ARATH4.031e-3659.46Transcription factor bHLH69 OS=Arabidopsis thalian... [more]
BH066_ARATH1.006e-3463.64Transcription factor bHLH66 OS=Arabidopsis thalian... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 142..191
e-value: 9.5E-11
score: 51.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 141..185
e-value: 7.5E-8
score: 32.2
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 136..185
score: 16.12
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 129..186
e-value: 1.9E-13
score: 52.0
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 134..195

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g138600.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g138600.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g138600.1; organism=Vigna unguiculata; type=mRNA; length=2005bp
CGCGATTGCTATTAGATGGTTATGAATTTGTTaataagaaagaaaatgag
ggaagaaggagaaaagaagtgtgtagtagaagaaCTTCCCAAGTCATTAA
TACGAACAGAAATAGTTGGGAAAGGGGAGAAAGAAAAGATAAATGGACTT
GGGTGTAAATACCAAAAATAGAGCCCCTTTAGgaaaaaaaaaagaagaag
aagaaaggagaagCTTTTTGTAAGCAGGATAAAGGCACCCGCACTGATTG
TGCAAAGTGGGAAGCTAACTACCCAGTAGAGAAAAAAAGCACAGTTAAGT
TAGTGCAAAACGAAGAAACAAAACCAAACAAAACCAATTTCACTTTCCGC
TTCATGTAGATTCTTCTTTCCTAACTCGTTTACCCGATTCAACCTTGACT
CGTCCCGGTTCAAGCTCAAACTCATACTCATGGCGAATAACCCTTCCGAC
ACTCCCGCAGACGATTTCCTTGAACAAATTCTCGGCCTCCCGACCTTCGC
TTCTGGAGACTCAGGCCTCGCTGCAGCCGATGTTGGACTCTCCGGTACTA
CTTCTCCGGCTCCGATGATGCTGCAGCTCAACTCTGCCGACCCCAACGCT
CACCTCACCGGCGCCGCCTTCCACGCGCCGGTCTATCAGTTAGGTCTTAG
CTTGGACCAAGGCAAAGGAGGGTTCATGAAGCCCGAGGAAGCCTCCGCTA
GTGGAAAGCGCTATCGCGACGACGTGGTTGATGGTAGAGCTAAGAATGTT
TTTCATGGGCAACCCATGCCTACTACGATGCCCTCTGCTCCACATCCTCC
AGCAATACGCCCTAGGGTGCGGGCAAGGAGAGGACAGGCTACAGATCCAC
ACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGAATCAGG
GCGTTGCAAGAACTTGTTCCTAGTGTCAATAAGACGGACAGAGCTGCCAT
GTTAGATGAAATCGTCGATTATGTCAAGTTCCTAAGGCTTCAAGTGAAGG
TTTTGAGCATGAGTAGATTGGGTGGAGCGGGTGCAGTGGCACCACTGGTA
ACTGACATACCGTTATCATCAGTTGAGGAAGAAGGTGGTGAAGGTGCGAG
AAACCGACCAGCATGGGACAAGTTGTCAAATGATGGAACAGAAAGACAAG
TAGCGAAACTTATGGAAGAAAACGTTGGGGCTGCCATGCAGTTTCTTCAA
TCAAAGGCTCTCTGCATCATGCCCATCTCACTAGCATCGGCAATTTATCA
GTCACAACCACCAGACTCTTCTAGTATAGTGAAGCCTGAAACTAATCCTC
CTTCATAGACCTTAGGCACACATGTGGAGCAATCTACTATTGGTCCCGTC
ACGGACTCACCTAATCTGCTGGGACCCACGCCTAACGCGTTATTTGTCTG
TTCCAAACCCCCATAAATAAGTCACTGGAAAGCATCAAGTTGCAATCAAA
GTCAGATGCCATAATTCTTCCTTTTTTGCCTTTGTTCCAGCTTTTGTCAA
TACAGGGTTCGATGTCAATGCCTTGGAAAATAGAAGCAAGTAGAGAGTAA
GAAATTGTCAAAAGTTGAATTGATATGCGTCTCTTTTTTTGTGTCAAATG
GTGGGGGGTAGTGGACCATGATGTAAGCGCTTTTGTAGTGGGCTGTGGGA
CCTTCTAAAAGGTTAGAGTGGTGTGTATACTTTTAATAGTGAAGCTGAAA
TCAACAATAGTTGCTTTAACAATGCTGGGCTATGGCCAGTCCTGCAAAAA
ATGATGGTGCTTTGTTTTTTGTTTACTCAAAAGTAATTGGACGACTTTTC
TCTATTCTTCTGAATCATCATTAAATTTTGATTCATCAGATGGAAATGGA
AGCACAAATGTGGGTGCTCCTTTCACCCAGTCCTTGTCAATCTATAAACT
ATAACCTTATTCAGCTCAAGTGACAGGAAGTCTTTGCTGAACCCGTCAAT
GTTCGGGTAAAGAAAGGCAAACAAATTTAAGAGGATATTCAGTTCAGTTT
TCCAA
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protein sequence of Vigun01g138600.1_Vu_IT97K-499-35_v1.1

>Vigun01g138600.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g138600.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g138600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=293bp
MANNPSDTPADDFLEQILGLPTFASGDSGLAAADVGLSGTTSPAPMMLQL
NSADPNAHLTGAAFHAPVYQLGLSLDQGKGGFMKPEEASASGKRYRDDVV
DGRAKNVFHGQPMPTTMPSAPHPPAIRPRVRARRGQATDPHSIAERLRRE
RIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGA
GAVAPLVTDIPLSSVEEEGGEGARNRPAWDKLSNDGTERQVAKLMEENVG
AAMQFLQSKALCIMPISLASAIYQSQPPDSSSIVKPETNPPS*
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mRNA from alignment at Vu01:31885755..31889990+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g138600.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g138600.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g138600.1; organism=Vigna unguiculata; type=mRNA; length=4236bp; location=Sequence derived from: Vu01:31885755..31889990+ (Vigna unguiculata
CGCGATTGCTATTAGATGGTTATGAATTTGTTAATAAGAAAGAAAATGAG
GGAAGAAGGAGAAAAGAAGTGTGTAGTAGAAGAACTTCCCAAGTCATTAA
TACGAACAGAAATAGTTGGGAAAGGGGAGAAAGAAAAGATAAATGGACTT
GGGTGTAAATACCAAAAATAGAGCCCCTTTAGGAAAAAAAAAAGAAGAAG
AAGAAAGGAGAAGCTTTTTGTAAGCAGGATAAAGGCACCCGCACTGATTG
TGCAAAGTGGGAAGCTAACTACCCAGTAGAGAAAAAAAGCACAGTTAAGT
TAGTGCAAAACGAAGAAACAAAACCAAACAAAACCAATTTCACTTTCCGC
TTCATGTAGATTCTTCTTTCCTAACTCGTTTACCCGATTCAACCTTGACT
CGTCCCGGTTCAAGCTCAAACTCATACTCATGGCGAATAACCCTTCCGAC
ACTCCCGCAGACGATTTCCTTGAACAAATTCTCGGCCTCCCGACCTTCGC
TTCTGGAGACTCAGGCCTCGCTGCAGCCGATGTTGGACTCTCCGGTACTA
CTTCTCCGGCTCCGATGATGCTGCAGCTCAACTCTGCCGACCCCAACGCT
CACCTCACCGGCGCCGCCTTCCACGCGCCGGTCTATCAGTTAGGTCTTAG
CTTGGACCAAGGCAAAGGAGGGTTCATGAAGCCCGAGGAAGCCTCCGCTA
GTGGAAAGCGCTATCGCGACGACGTGGTTGATGGTAGAGCTAAGAATGTA
AACCTCTACCTTATTTCGATTCTCCTCTTTTTTTTTTTTTTGTTTTATAT
GATATTCTATTTAGACAGAGTTCTGTGCTTTGCATAAATTAATTATTTCG
GTCTAATATGAGTGCTTGTTTCAGGAAGAGGTTTTATATGCTTAGAATCA
CTTTAGTTGAATTGCCAGGTTCAAATTACCACCATTGCATTTGCATAAAG
CAAAGCGAAACGGTTTAATTAAAGGTTAATGAAAATAGTAGCAAGCAGTG
GAATGTTGATTTCCTTCCAAATTAAGGTATATAAAAAATGAGATTATTCG
AGTTTCATGTTGACGGATTTGTTAGGTGTGTGGTCGTTGGTGATGCTAGT
CAACTTAGTATAGACACGTCAATAACATGTCTCGTTGTAATTGCCCACGC
TGTTGGGTATATTGTCAGATTTGTTAGGTTTGAGTATGATTTATTGAGTT
AGTTTATTTACACCTTTTGTAGGCACTTCTGGTTACCTTCTGTAATCTTT
AAACCTCTTAAATCATGTAGTATATTTATGCTTGGCTTTGAGTAATCCTT
GAATGATTGTTTTCTTGTGAGAATCTTCTTTTTCTTTTCCCTGTTCTCAT
TCTTACTGGATCAAGTAGCATTTGTTGTCCGGTTGATAATTCATAACCCT
CTTGTAGGTTTTTCATGGGCAACCCATGCCTACTACGATGCCCTCTGCTC
CACATCCTCCAGCAATACGCCCTAGGGTGCGGGCAAGGAGAGGACAGGCT
ACAGATCCACACAGCATAGCTGAACGGGTGAGTTTTTAGATGCTTGAATG
CAAACTGTTTGATTAAACTGCAGGTTACGGTCGTAGCTCATTCTGTCTTC
CATGTTACCCTTTGGTTACAGTTGCGCAGAGAAAGAATAGCAGAAAGAAT
CAGGGCGTTGCAAGAACTTGTTCCTAGTGTCAATAAGGTATGTGATTTCT
TTTGCGTATCCTCTTATTGCTAATTGTGGTCTTGCTTTTGTCATTAGCTA
GTGGAATAGACCTTGGTAAAGCAAAGGGTTTTATCATGAATTGTTAGAAA
TGATAAAGAATATCAAGTTAATCTTTACATAAGATGCGTATTTATTACTA
TTCCCTTTAATTTCTAGCTTGTTCACTTTACAATAACACAGTTTGTGATC
AATTTCAGTTTGTGTTTAAGTAGATTCATCTCTCACGAATAAAATTGACA
TTAGTAAAAACATTATTGCAAGAATAAAAAAAGCAGTGCTAAAAGTGAAG
CCTTTCAAGGCTTGCTTGTGACTTATCTGTTTTCTTTCTTGGGGGATATT
GTTCATTACATACTTGTTTTGTACTTCACCCATCTCCACTTACACTATTG
ACTTTCATACATTCTGTCTTCCTTTTACAATACACCTTAGAAAAAGCAGA
TGTCATTACTTTTATAACTTTATTGTGAACATTTAACTTTTACAAAATAG
GTTGCTTTTGCATGTAAAAATTGCTTCGATTCAAGAATATTTGGACACTT
CTGGCTTTTCAAGAGCTTTTCTTTAGGCAAGGCCTGGTTAAAGCAATGAG
TTTGTTAAAGCTGAACATTATTGTACATTGTGCCGAGCTTGCCTGAATGC
AATGTATAATCTAGGATAACTAGTTTCTGGTAGTGGAATAACATCTGCGT
GTATCTTAAACTGGCGTGCATGCAAATGGAATTTTTAAGAATACATAGTG
TCAAATAATTGTACTGGATTTCCGATATGGTTTTGTATGATATATGTGAT
GGCTCTGTTTTTCTGCATGGCTGCTGAAAAGATAAGAGTACTGAATTATT
TTATTTGTTCTAATATTGTGGTGCATTTCTATTGTGTTCAGACGGACAGA
GCTGCCATGTTAGATGAAATCGTCGATTATGTCAAGTTCCTAAGGCTTCA
AGTGAAGGTAAAAATGCCATTGTTATCCTCAGCGATCCTGCTTTTATTTT
CCAAGTTTGGTCTCTATTTGTATCGATGACAATTTATAATTACTTATCAT
AATTTGTTGGGTATTGCCTGTTAAATCTGTCAACCTTCACATTTTTATCC
CCATCGCTCTGAGAGTTCAGTTAGTTAGTGTTCAACTCGTTATCATGAAT
CCCATAATACGGTGGTGGCCACTTGCCACTTTGGATGAGAACTTGTTGAC
TGACTAAGACTGAGGAATATCTAAACACAGTCAAATGGTAGCATTTTCAG
GCTGCTGAGTGCGCTGTATTTTTTTTAAAAAAACCGTCCAATAACTTTTA
AGGGTTTTATGTTGGAATACAAATTACTTCTTTGAACCATGATATCAATA
TAAAAGCAGAAGGCTTTTCTCTCTAGCCAAATTTAGATCTGTAGCAGTGT
GAAATTGAGGCTGCAAACGACTTCCAATGACTTGATTCATGTACCTTTCA
GGTTTTGAGCATGAGTAGATTGGGTGGAGCGGGTGCAGTGGCACCACTGG
TAACTGACATACCGTTATCATCAGTTGAGGTGATTATAGTGAGGAAATAG
TCGAAAAATTTTTATTTTTAATATCCTCAAGAGATTTAACGAATTTGGTG
ATGATCAGGAAGAAGGTGGTGAAGGTGCGAGAAACCGACCAGCATGGGAC
AAGTTGTCAAATGATGGAACAGAAAGACAAGTAGCGAAACTTATGGAAGA
AAACGTTGGGGCTGCCATGCAGTTTCTTCAATCAAAGGCTCTCTGCATCA
TGCCCATCTCACTAGCATCGGCAATTTATCAGTCACAACCACCAGACTCT
TCTAGTATAGTGAAGCCTGAAACTAATCCTCCTTCATAGACCTTAGGCAC
ACATGTGGAGCAATCTACTATTGGTCCCGTCACGGACTCACCTAATCTGC
TGGGACCCACGCCTAACGCGTTATTTGTCTGTTCCAAACCCCCATAAATA
AGTCACTGGAAAGCATCAAGTTGCAATCAAAGTCAGATGCCATAATTCTT
CCTTTTTTGCCTTTGTTCCAGCTTTTGTCAATACAGGGTTCGATGTCAAT
GCCTTGGAAAATAGAAGCAAGTAGAGAGTAAGAAATTGTCAAAAGTTGAA
TTGATATGCGTCTCTTTTTTTGTGTCAAATGGTGGGGGGTAGTGGACCAT
GATGTAAGCGCTTTTGTAGTGGGCTGTGGGACCTTCTAAAAGGTTAGAGT
GGTGTGTATACTTTTAATAGTGAAGCTGAAATCAACAATAGTTGCTTTAA
CAATGCTGGGCTATGGCCAGTCCTGCAAAAAATGATGGTGCTTTGTTTTT
TGTTTACTCAAAAGTAATTGGACGACTTTTCTCTATTCTTCTGAATCATC
ATTAAATTTTGATTCATCAGATGGAAATGGAAGCACAAATGTGGGTGCTC
CTTTCACCCAGTCCTTGTCAATCTATAAACTATAACCTTATTCAGCTCAA
GTGACAGGAAGTCTTTGCTGAACCCGTCAATGTTCGGGTAAAGAAAGGCA
AACAAATTTAAGAGGATATTCAGTTCAGTTTTCCAA
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Coding sequence (CDS) from alignment at Vu01:31885755..31889990+

>Vigun01g138600.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g138600.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g138600.1; organism=Vigna unguiculata; type=CDS; length=879bp; location=Sequence derived from: Vu01:31885755..31889990+ (Vigna unguiculata
ATGGCGAATAACCCTTCCGACACTCCCGCAGACGATTTCCTTGAACAAAT
TCTCGGCCTCCCGACCTTCGCTTCTGGAGACTCAGGCCTCGCTGCAGCCG
ATGTTGGACTCTCCGGTACTACTTCTCCGGCTCCGATGATGCTGCAGCTC
AACTCTGCCGACCCCAACGCTCACCTCACCGGCGCCGCCTTCCACGCGCC
GGTCTATCAGTTAGGTCTTAGCTTGGACCAAGGCAAAGGAGGGTTCATGA
AGCCCGAGGAAGCCTCCGCTAGTGGAAAGCGCTATCGCGACGACGTGGTT
GATGGTAGAGCTAAGAATGTTTTTCATGGGCAACCCATGCCTACTACGAT
GCCCTCTGCTCCACATCCTCCAGCAATACGCCCTAGGGTGCGGGCAAGGA
GAGGACAGGCTACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAA
AGAATAGCAGAAAGAATCAGGGCGTTGCAAGAACTTGTTCCTAGTGTCAA
TAAGACGGACAGAGCTGCCATGTTAGATGAAATCGTCGATTATGTCAAGT
TCCTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCG
GGTGCAGTGGCACCACTGGTAACTGACATACCGTTATCATCAGTTGAGGA
AGAAGGTGGTGAAGGTGCGAGAAACCGACCAGCATGGGACAAGTTGTCAA
ATGATGGAACAGAAAGACAAGTAGCGAAACTTATGGAAGAAAACGTTGGG
GCTGCCATGCAGTTTCTTCAATCAAAGGCTCTCTGCATCATGCCCATCTC
ACTAGCATCGGCAATTTATCAGTCACAACCACCAGACTCTTCTAGTATAG
TGAAGCCTGAAACTAATCCTCCTTCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity