Vigun01g143200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: TOL2_ARATH (TOM1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=TOL2 PE=1 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 1.673e-121 Identity = 202/375 (53.87%), Postives = 272/375 (72.53%), Query Frame = 1 Query: 1 MERLKLAQLGERLKTGGAQMGRMVSGKVKEMLQAPTPESKMVDEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKINHKNPLVQTLSLDLLEACAMNCDKVFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAWGDSEDLAYLPVFRQTYMRLKEGRDDPLDMAGGNSPSIPYAS--ESYAHQ-YPVDPPERYPIPEAELAIDDPAAFSSNYQHISVEEKKEHLVVARXXXXXXXXXXXXXAEPKPLKEDLTVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVVSNYEKLEAAQMSGTQEPQNAEPAKHDA-EAVQNPNEVPVR--FEIDDSEESEADQNLDRKVPQKSNTLKV 1107 M++LK+A+ GE+LKTGGAQM RMVS KVK+MLQAPT ESKMVDEATLET+E+PNWG+N+RICA IN+D+FNG+E+V+AIKRKI+ K+P+ Q LSL+LLEACAMNC+KVFSE+ASEK+LD++V LI N +A R+RAFQLIRAWG S+DL YLPVF QTYM L EG + A G S+P S ES + PV PP YP+P E A+ D N+ ++S+++KKE + + RNSLELLSS+LN+E +P ++DLTVSL+ KCKQS +I+ I+ESTTDDE LFEAL+LNDELQQV+S+Y+K + + + Q + +K + + + PV+ DD + SEA + ++ V ++ +K+ Sbjct: 1 MDKLKIAEWGEKLKTGGAQMSRMVSEKVKDMLQAPTLESKMVDEATLETLEEPNWGMNMRICAQINNDEFNGTEIVRAIKRKISGKSPVSQRLSLELLEACAMNCEKVFSEVASEKVLDEMVWLIKNGEADSENRKRAFQLIRAWGQSQDLTYLPVFHQTYMSL-EGENGL--HARGEENSMPGQSSLESLMQRPVPVPPPGSYPVPNQEQALGDDDGLDYNFGNLSIKDKKEQIEITRNSLELLSSMLNTEGKPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDDEGVLFEALHLNDELQQVLSSYKKPDETEKKASIVEQESSGSKDTGPKPTEQEEQEPVKKTGADDDKKHSEASGSSNKTVKEEKQAVKI 372
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: TOL1_ARATH (TOM1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOL1 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 4.840e-65 Identity = 141/369 (38.21%), Postives = 213/369 (57.72%), Query Frame = 1 Query: 13 KLAQLGERLKTGGAQMGRMVSG-------KVKEMLQAPTPESKMVDEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKINHKNPLVQTLSLDLLEACAMNCDKVFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAWGDS-EDLAYLPVFRQTYMRLKE------GRDDPLDMAGGNSPSIPYASESYAHQYPVDPPERYPIPEAELAIDDPAAFSSNYQHISVEEKKEHLVVARXXXXXXXXXXXXXAEPKPLKEDLTVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVVSNYEKLEAAQMSGTQEPQNAEPAKHDAEAVQNPNEVPVRFEIDDSEESEADQNLDRK 1077 K+ GERLK GG+++ +S KVKE+ Q P P K+V++AT E +E+P+W +NL IC MIN + N E+++ IK++I K P +Q L+L LLE C NC+K FSE+A+E++LD++V+LID+PQ + R +A LI AWG+S +L YLPVF +TY LK GRD+ +P A + A + D P+ P A + D P + + E+ KE +ARNS+ELLS++L+S + L++DLT +L+ +C+QS + ++ I+E+ ++EA LFEAL +NDEL + +S YE++ T EPA +PV E DDS +++L RK Sbjct: 8 KVTAFGERLKIGGSEVSNKISAGVSSMSFKVKELFQGPNPTDKIVEDATTENLEEPDWDMNLEICDMINQETINSVELIRGIKKRIMMKQPRIQYLALVLLETCVKNCEKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVFEETYKSLKARGIRFPGRDN-----ESLAPIFTPARSTPAPELNADLPQHVHEP-AHIQYDVPV------RSFTAEQTKEAFDIARNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQRIIETAGENEALLFEALNVNDELVKTLSKYEEMNKPSAPLTSH----EPAM-----------IPVAEEPDDSPIHGREESLVRK 349
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: TOL9_ARATH (TOM1-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=TOL9 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.526e-19 Identity = 86/287 (29.97%), Postives = 136/287 (47.39%), Query Frame = 1 Query: 121 MVDEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKINHKNPLVQTLSLDLLEACAMNC-DKVFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAWGDS--EDLAYLPVFRQTYMRLKEGRDDPLDMAGGNSPSIPYASESYAHQYPVDPPERYPIPEAELAIDDPAAFSSNYQHISVEEKKEHLVVARXXXXXXX----XXXXXXAEPKPLKEDL----TVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVVSNYEKLEAAQMSGT 948 MV+ AT E + P+W +NL IC M+NSD +VVK IK++I +NP Q L+L LLE NC D V +A + ++ ++VR++ H + + LI W ++ A P + Y L AG P SE A + PP+ P+ + + A ++ S E + L ++ + + S EP KEDL V L+ +C+ + +V ST+ DE+ L + L LND+LQ+V++NYE + A+ + GT Sbjct: 5 MVERATSEMLIGPDWAMNLEICDMLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLLETIVKNCGDMVHMHVAEKGVIHEMVRIVKKKPDFH-VKEKILVLIDTWQEAFGGPRARYPQYYAGYQELLR--------AGA---VFPQRSERSAPVF--TPPQTQPLTSYPPNLRN-AGPGNDVPEPSAEPEFPTLSLSEIQNAKGIMDVLAEMLSALEPG-NKEDLKQEVMVDLVEQCRTYKQRVVHLVNSTS-DESLLCQGLALNDDLQRVLTNYEAI-ASGLPGT 273
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: TOL3_ARATH (TOM1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOL3 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.768e-17 Identity = 72/274 (26.28%), Postives = 126/274 (45.99%), Query Frame = 1 Query: 127 DEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKINHKNPLVQTLSLDLLEACAMNC-DKVFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAW----GDSEDLAYLPVFRQTYMRLKEGRDDPLDMAGGNSPSIPYASESYAHQYPVDPPERYPIPEAELAIDDPAAFSSNYQH-----ISVEEKKEHLVVARXXXXXXXXXXXXXAEPKPLKEDLTVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVVSNYE 918 + AT + + P+W IN+ +C +IN + E VK +K+++ KN VQ L+L LE + NC + V+ I +L D+V+++ + + R + L+ W G S F Q Y E R ++ S+P+ + PP+ PI A D+ AA ++ Q +S+EE + + + P+ LKE+L V L+ +C+ + +V +TT DE + + L LND LQ+V+ +++ Sbjct: 10 ERATNDMLIGPDWAINIELCDIINMEPSQAKEAVKVLKKRLGSKNSKVQILALYALETLSKNCGESVYQLIVDRDILPDMVKIVKK-KPDLTVREKILSLLDTWQEAFGGSGGR-----FPQYYNAYNELRSAGIEFPPRTESSVPFFT----------PPQTQPIVAQATASDEDAAIQASLQSDDASALSMEEIQS--AQGSVDVLTDMLGALDPSHPEGLKEELIVDLVEQCRTYQRRVMALV-NTTSDEELMCQGLALNDNLQRVLQHHD 264
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: TOL4_ARATH (TOM1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOL4 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.226e-16 Identity = 71/269 (26.39%), Postives = 124/269 (46.10%), Query Frame = 1 Query: 127 DEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKINHKNPLVQTLSLDLLEACAMNC-DKVFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAWGDS--EDLAYLPVFRQTYMRLKEGRDDPLDMAGGNSPSIPYASESYAHQYPVDPPERYPIPEAELAIDDPAAFSSNYQHISVEEKKEHLVVARXXXXXXXXXXXXXAEPKPLKEDLTVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVVSNYEKL 924 + AT + + P+W IN+ +C +IN D E VK +K+++ KN VQ L+L LE + NC + V+ I LL+D+V+++ + + R + L+ W ++ P + Y L+ AG P +S S+ P E I +A L DD ++ S + I E +++ + P+ LKE++ V L+ +C+ + +V +TTD+E L + L LND LQ V+ ++ + Sbjct: 10 ERATNDMLIGPDWAINIELCDLINMDPSQAKEAVKVLKKRLGSKNSKVQILALYALETLSKNCGENVYQLIIDRGLLNDMVKIVKK-KPELNVREKILTLLDTWQEAFGGRGGRYPQYYNAYNDLRS--------AGIEFPPRTESSLSFFTPPQTQPDEDAAI-QASLQGDDASSLS--LEEIQSAEGSVDVLM-------DMLGAHDPGNPESLKEEVIVDLVEQCRTYQRRVMTLVNTTTDEE-LLCQGLALNDNLQHVLQRHDDI 258
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: TOL7_ARATH (TOM1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=TOL7 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.687e-15 Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 124 VDEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKINHKNPLVQTLSLDLLEACAMNC-DKVFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAWGDS 444 VD+AT E + P+W I + IC +NS+++ + +KA+KR++ HK+ VQ L+L LLEA NC D V S IA + LL+D+V+L+ + R + L+ W ++ Sbjct: 26 VDKATSELLRTPDWTIIIAICDSLNSNRWQCKDAIKAVKRRLQHKSSRVQLLTLTLLEAMLKNCGDFVHSHIAEKHLLEDMVKLV-RKKGDFEVRNKLLILLDTWNEA 132
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: TOL8_ARATH (TOM1-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=TOL8 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.709e-14 Identity = 72/277 (25.99%), Postives = 130/277 (46.93%), Query Frame = 1 Query: 121 MVDEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKINHKNPLVQTLSLDLLEACAMNCDK-VFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAWGD--SEDLAYLPVFRQTYMRLKEGRDDPLDMAGGNSPSIPYASESYAHQYPVDPPERYPIPEAEL---AIDDPAAFSSNYQHISVEEKKEHLVVARXXXXXXXXXXXXXAEPKPLKEDLTVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVVSNYEKLEAA 933 +VD AT + + P+W +NL IC M+N + EVV IK+++ + VQ L+L LLE NC + + ++A + +L +V++ + + + + LI W + S P + Y L AG P P + S P RYP AID + S + +S+ E + + E++++I + E LK+++ V L+ +C+ + +V ST+ DE+ L + L LND+LQ++++ +E + + Sbjct: 5 LVDRATSDMLIGPDWAMNLEICDMLNHEPGQTREVVSGIKKRLTSRTSKVQLLALTLLETIITNCGELIHMQVAEKDILHKMVKMAKR-KPNIQVKEKILILIDTWQESFSGPQGRHPQYYAAYQELLR--------AGIVFPQRPQITPSSGQN---GPSTRYPQNSRNARQEAID--TSTESEFPTLSLTEIQNARGIMDVLAEMMNAIDGNNKE--GLKQEVVVDLVSQCRTYKQRVVHLVNSTS-DESMLCQGLALNDDLQRLLAKHEAIASG 264
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: HSE1_CRYNJ (Class E vacuolar protein-sorting machinery protein HSE1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=HSE1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.880e-13 Identity = 34/114 (29.82%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 100 APTPESKMVDEATLETMEDPNWGINLRICAMINSDQFNGS-EVVKAIKRKINHKNPLVQTLSLDLLEACAMNCDK-VFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAW 435 A +P +V +AT E + +W +N+ +C ++SD NG+ + V A++++++H+NP VQ +L+L + A NC K + E++S L RLI++ +++A +++W Sbjct: 5 AASPYDDLVIKATDENLASEDWALNMDVCDKVSSDGQNGARQAVTALQKRLSHRNPNVQIYALELANSLAQNCGKDLLGELSSRNWTSALDRLINDRATSTPVKKKALSFVKSW 118
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: HSE1_CRYNB (Class E vacuolar protein-sorting machinery protein HSE1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=HSE1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.383e-13 Identity = 34/114 (29.82%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 100 APTPESKMVDEATLETMEDPNWGINLRICAMINSDQFNGS-EVVKAIKRKINHKNPLVQTLSLDLLEACAMNCDK-VFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAW 435 A +P +V +AT E + +W +N+ +C ++SD NG+ + V A++++++H+NP VQ +L+L + A NC K + E++S L RLI++ +++A +++W Sbjct: 5 ATSPYDDLVIKATDENLASEDWALNMDVCDKVSSDGQNGARQAVTALQKRLSHRNPNVQIYALELANSLAQNCGKDLLGELSSRNWTSALDRLINDRATSTPVKKKALSFVKSW 118
BLAST of Vigun01g143200.1 vs. DB:Swiss
Match: HSE1_USTMA (Class E vacuolar protein-sorting machinery protein HSE1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=HSE1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.316e-12 Identity = 40/137 (29.20%), Postives = 67/137 (48.91%), Query Frame = 1 Query: 91 MLQAPTPESKMVDEATLETMEDPNWGINLRICAMINSDQFNGSE-VVKAIKRKINHKNPLVQTLSLDLLEACAMNCD-KVFSEIASEKLLDDLVRLIDNPQAHHSTRRRAFQLIRAWGDSEDLAYLPVFRQTYMRLK 495 M A P +V +AT + + NW +NL +C ++S + + AI++++ H+N VQ +L L +A A NC EIAS L R+ + H + ++R L++ W D L + ++TY LK Sbjct: 1 MFTAKNPFEDIVLKATSDELTSENWELNLEVCDKVSSGGDTAARNCIAAIQKRLVHRNANVQLYALTLADAVAKNCGLAAHQEIASRSFTQTLARICLDRNTHSTVKKRCSALVKEWAGEFDDQSLGLMKETYESLK 137 The following BLAST results are available for this feature:
BLAST of Vigun01g143200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g143200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g143200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g143200.1; organism=Vigna unguiculata; type=mRNA; length=1725bpback to top protein sequence of Vigun01g143200.1_Vu_IT97K-499-35_v1.1 >Vigun01g143200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g143200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g143200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=403bpback to top mRNA from alignment at Vu01:32429214..32431901- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g143200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g143200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g143200.1; organism=Vigna unguiculata; type=mRNA; length=2688bp; location=Sequence derived from: Vu01:32429214..32431901- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:32429214..32431901- >Vigun01g143200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g143200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g143200.1; organism=Vigna unguiculata; type=CDS; length=1209bp; location=Sequence derived from: Vu01:32429214..32431901- (Vigna unguiculataback to top |