Vigun01g169900.1

Transcript Overview
NameVigun01g169900.1
Unique NameVigun01g169900.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length4262
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:35180809..35187492 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR007Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR019Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR027Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL193Pisum sativum Cameor genome v1aPisum sativum
psvuL198Pisum sativum Cameor genome v1aPisum sativum
crvuL003Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL382Pisum sativum Cameor genome v1aPisum sativum
psvuL525Pisum sativum Cameor genome v1aPisum sativum
crvuL220Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL472Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL580Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL006Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0225Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL252Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL256Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0348Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0678Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0865Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0990Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0545Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0655Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0865Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0870Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1081Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1083Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1153Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL092Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL326Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL333Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL406Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL575Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR021Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR033Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR043Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR048Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR059Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL121Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL114Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL343Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL348Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL319Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL324Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL585Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvuL013Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL019Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL275Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL582Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL584Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL437Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL756Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR005Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR017Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR020Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL005Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL143Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL213Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL217Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL423Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL041Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL271Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL274Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL337Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL001Cicer arietinum
carvuL159Cicer arietinum
carvuL236Cicer arietinum
carvuL241Cicer arietinum
ccavuL071Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL184Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL186Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR020Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR024Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR047Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR056Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR000Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR013Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR027Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR058Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL449Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL486Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL549Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL553Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL324Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL468Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL504Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL554Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL557Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL403Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL500Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL507Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR017Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR027Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g169900Vigun01g169900_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g169900.1Vigun01g169900.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g169900.1_Vu_IT97K-499-35_v1.1Vigun01g169900.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g169900.1.v1.1.five_prime_UTR.1Vigun01g169900.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g169900.1.v1.1.CDS.1Vigun01g169900.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g169900.1.v1.1.CDS.2Vigun01g169900.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g169900.1.v1.1.CDS.3Vigun01g169900.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g169900.1.v1.1.CDS.4Vigun01g169900.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g169900.1.v1.1.CDS.5Vigun01g169900.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g169900.1.v1.1.CDS.6Vigun01g169900.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g169900.1.v1.1.CDS.7Vigun01g169900.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g169900.1.v1.1.three_prime_UTR.1Vigun01g169900.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun01g169900.1 vs. DB:Swiss
Match: PCFS4_ARATH (Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana OX=3702 GN=PCFS4 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.396e-51
Identity = 95/160 (59.38%), Postives = 114/160 (71.25%), Query Frame = 1 
Query:  223 ELVTQYKTALAELTFNSKPIITNLTIIAGENQSAAKAIADTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCKAYRQVDPIVHSSMKHLFGTWKGVFPPQCLQMIEKELGFTPAVNGSASVSATVRNDLQSQRPPHSIHVNPKYLER 702
            E+V  Y+  L ELTFNSKPIIT+LTIIAGE +   + IA+ +C  ILE P +QKLPSLYLLDSIVKNIGRDY +YF+ RLPEVFC AYRQ  P +H SM+HLFGTW  VFPP  L+ I+ +L  + A N S SV A+     +  +P   IHVNPKYL R
Sbjct:   64 EIVQLYEVVLGELTFNSKPIITDLTIIAGEQREHGEGIANAICTRILEAPVEQKLPSLYLLDSIVKNIGRDYGRYFSSRLPEVFCLAYRQAHPSLHPSMRHLFGTWSSVFPPPVLRKIDMQLQLSSAANQS-SVGAS-----EPSQPTRGIHVNPKYLRR 217

HSP 2 Score: 127.102 bits (318), Expect = 1.546e-28
Identity = 62/171 (36.26%), Postives = 98/171 (57.31%), Query Frame = 1 
Query: 2545 IGFDFKPNVIREFHEPVIRELLDDFPHHCKSCGIRFKPEEQYKRHLEWHATR----EHGPIKVSRSWYAKSSDWIAGKVDYSSELEFTDSVVVHDKETESSHLETM-IRADENQCLCVLCGELFEDVYCHERNEWMFKGAVYMNCSDYN-DEMESRNVGPIIHAKCLSENS 3039
            +G +F  ++++  +E  I  L  D P  C +CG+RFK +E++ +H++WH T+    ++     SR W+  +S W++G     +E       +  +  TE    E M + ADE+Q  C LCGE FED Y  E  EWM+KGAVYMN  + +  +M+   +GPI+HAKC  E++
Sbjct:  625 LGLEFDADMLKIRNESAISALYGDLPRQCTTCGLRFKCQEEHSKHMDWHVTKNRMSKNHKQNPSRKWFVSASMWLSGAEALGAEA--VPGFLPTEPTTEKKDDEDMAVPADEDQTSCALCGEPFEDFYSDETEEWMYKGAVYMNAPEESTTDMDKSQLGPIVHAKCRPESN 793
[Close]
BLAST of Vigun01g169900.1 vs. DB:Swiss
Match: PCFS5_ARATH (Polyadenylation and cleavage factor homolog 5 OS=Arabidopsis thaliana OX=3702 GN=PCFS5 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.433e-23
Identity = 61/178 (34.27%), Postives = 91/178 (51.12%), Query Frame = 1 
Query: 2545 IGFDF-KPNVIREFHEPVIRELLDDFPHHCKSCGIRFKPEEQYKRHLEWHA---------TREHGPIKVSRSWYAKSSDWI-----AGKVDYSSELEFTDSVVVHDKETESSHLETMIRADENQCLCVLCGELFEDVYCHERNEWMFKGAVYMNCSDYNDEMESRNVGPIIHAKCLSE 3033
            +G  F  P+ +   HE VI+ L  D P  C SCG+RFK +E++ +H++WH          TR     K SR W A +S W+      G V+ +S   F    +    E +    + M+ ADE+Q  C LC E FE+ + HE ++WM+K AVY+          ++N G I+H KC+ E
Sbjct:  220 VGLSFDNPSSLNVRHESVIKSLYSDMPRQCTSCGVRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWLASASLWLCAPTGGGTVEVAS---FGGGEMQKKNEKDQVQKQHMVPADEDQKNCALCVEPFEEFFSHEADDWMYKDAVYL----------TKN-GRIVHVKCMPE 383
[Close]
BLAST of Vigun01g169900.1 vs. DB:Swiss
Match: PCFS1_ARATH (Polyadenylation and cleavage factor homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PCFS1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.343e-22
Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = 1 
Query: 2545 IGFDF-KPNVIREFHEPVIRELLDDFPHHCKSCGIRFKPEEQYKRHLEWH---------ATREHGPIKVSRSWYAKSSDWI-AGKVDYSSELEFTDSVVVHDKETESSHLETMIRADENQCLCVLCGELFEDVYCHERNEWMFKGAVYMNCSDYNDEMESRNVGPIIHAKCLSE 3033
            +G  F  P+ +   HE VI+ L  D P  C SCG+RFK +E++ +H++WH          TR     K SR W A +S W+ A     + E+      +   K  +    + M+ ADE+Q  C LC E FE+ + HE ++WM+K AVY+          ++N G I+H KC+ E
Sbjct:  227 VGLSFDNPSSLNVRHESVIKSLYSDMPRQCSSCGLRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWLASASLWLCAATGGETVEVASFGGEMQKKKGKDEEPKQLMVPADEDQKNCALCVEPFEEFFSHEDDDWMYKDAVYL----------TKN-GRIVHVKCMPE 389
[Close]
BLAST of Vigun01g169900.1 vs. DB:Swiss
Match: PCF11_HUMAN (Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens OX=9606 GN=PCF11 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 3.013e-20
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  238 YKTALAELTFNSKPIITNLTIIAGENQSAAKAIADTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCKAYRQVDPIVHSSMKHLFGTWKGVFPPQCLQMIEKELGFTPAVNGSASVSATVRNDLQSQRPPHSIHVNPKYLER 702
            Y+++L +LTFNSKP I  LTI+A EN   AK I   + A   + PS +KLP +YL+DSIVKN+GR+Y+  F   L   F   + +VD     S+  L  TW  +FP + L  ++  +    +++ +  +     N   S     SIHVNPK+L +
Sbjct:   22 YQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRSTWDEIFPLKKLYALDVRVN---SLDPAWPIKPLPPNVNTS-----SIHVNPKFLNK 168
[Close]
BLAST of Vigun01g169900.1 vs. DB:Swiss
Match: YD14_SCHPO (Uncharacterized protein C4G9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4G9.04c PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.087e-18
Identity = 53/125 (42.40%), Postives = 71/125 (56.80%), Query Frame = 1 
Query:  238 YKTALAELTFNSKPIITNLTIIAGENQSAAKAIADTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCKAYRQVDPIVHSSMKHLFGTWKGVFPPQCLQMIEKELGFTPAVNG 612
            Y +AL +LTFNSKPII  LT IA EN+  A +I + +  +I + P + KLP+LYLLDSI KN+G  Y  +F + L   F  AY  V+P +   +  L  TWK   PP    +   E  F+P V  
Sbjct:    8 YLSALEDLTFNSKPIIHTLTYIAQENEPYAISIVNAIEKHIQKCPPNCKLPALYLLDSISKNLGAPYTYFFGLHLFSTFMSAYTVVEPRLRLKLDQLLATWKQR-PPNSSSL---EPVFSPIVTA 128
[Close]
BLAST of Vigun01g169900.1 vs. DB:Swiss
Match: PCF11_YEAST (Protein PCF11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PCF11 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.131e-14
Identity = 46/128 (35.94%), Postives = 68/128 (53.12%), Query Frame = 1 
Query:  226 LVTQYKTALAELTFNSKPIITNLTIIAGENQSAAKAIADTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCKAYRQVDPIVHSSMKHLFGTWKG-------VFPPQCLQMIEKEL 588
            +V  + + L ELTFNS+PIIT LT +A EN S A+   D + + I +    QKL + Y LDSI KN+G  Y  YF+  L  ++ + Y  VD    + + ++F  W         +F    L+ IE+ L
Sbjct:    8 IVKDFNSILEELTFNSRPIITTLTKLAEENISCAQYFVDAIESRIEKCMPKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLYKRTYLLVDNTTRTKLINMFKLWLNPNDTGLPLFEGSALEKIEQFL 135
[Close]
BLAST of Vigun01g169900.1 vs. DB:Swiss
Match: PCF11_CAEEL (Polyadenylation and cleavage factor homolog 11 OS=Caenorhabditis elegans OX=6239 GN=pcf-11 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.947e-9
Identity = 55/194 (28.35%), Postives = 89/194 (45.88%), Query Frame = 1 
Query:  238 YKTALAELTFNSKPIITNLTIIAGENQSAAKAIADTVCANILEVPSDQKLPSLYLLDSIVKNIGR--DYIKYFAVRLPEVFCKAYRQVDPIVHSSMKHLFGTWKG--VFPPQCLQMIEKELGFT----PAVNGSASVSATVRNDLQSQRPPHS-----------------IHVNPKYLERQRLQQSSTSKGVVD 744
            Y+  LAEL  N+K  I  LTI+A + + AA  I + +  ++      QKL  +Y+ DSI+KN+ +  DY   FA ++  +F  A+RQ D  + +S+  +  TW    +F P  L  ++ ++       P  N        +R+D Q   P  S                 + VNPK++       +S SK VV+
Sbjct:   11 YRETLAELRNNNKTQINLLTILADDFKKAAPQIVEVIERHLTTCSPSQKLLVMYVCDSILKNVKKPNDYDALFARKIVSMFEHAFRQGDERIRTSLYRIRVTWASTTLFMPSKLYELDMKINKLDPNWPISN--PQTGRALRDDPQVMAPSQSRPAGNATSPAASTSTNRVFVNPKFIGSSTPGAASASKTVVE 202
The following BLAST results are available for this feature:
BLAST of Vigun01g169900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
PCFS4_ARATH4.396e-5159.38Polyadenylation and cleavage factor homolog 4 OS=A... [more]
PCFS5_ARATH1.433e-2334.27Polyadenylation and cleavage factor homolog 5 OS=A... [more]
PCFS1_ARATH2.343e-2233.91Polyadenylation and cleavage factor homolog 1 OS=A... [more]
PCF11_HUMAN3.013e-2037.42Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo ... [more]
YD14_SCHPO1.087e-1842.40Uncharacterized protein C4G9.04c OS=Schizosaccharo... [more]
PCF11_YEAST1.131e-1435.94Protein PCF11 OS=Saccharomyces cerevisiae (strain ... [more]
PCF11_CAEEL7.947e-928.35Polyadenylation and cleavage factor homolog 11 OS=... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006569CID domainSMARTSM00582558neu5coord: 75..197
e-value: 4.3E-45
score: 165.8
IPR006569CID domainPROSITEPS51391CIDcoord: 72..200
score: 35.511
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 67..197
e-value: 4.1E-42
score: 145.4
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 72..200
IPR006903RNA polymerase II-binding domainPFAMPF04818CTD_bindcoord: 128..181
e-value: 5.5E-7
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..707
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..551
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 719..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 577..599
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 811..839
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 675..707
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 577..593
NoneNo IPR availableCDDcd16982CID_Pcf11coord: 77..187
e-value: 2.29422E-54
score: 182.765
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 877..897
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 875..902
score: 8.746

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g169900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g169900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g169900.1; organism=Vigna unguiculata; type=mRNA; length=4262bp
AATATTTTTCAACCAAGATCACAGTTGAACGTGAAAATAGCACCTTCAGG
CACTGTGGCTTTCATTGGTAACGCATACAATCCCAATCCCCAATGCGCAG
TTCGCTTATATAAACACActacctctcttcctaccttcatctgtatctct
atttctttctctctctcGTAACTTTTTTTATTAATTCTTGTAAATTAGGA
TTAGGGTTTATATCAATTTGCACTGTACAATTTAAATCAGAACCTTGTGT
TCTCATGCATTCCTCTTTTCTTCAAATAAAACCGGTCCTAGAACCAATCA
AGGGGATGCTATTTCGTGCCCCAAATCCAGTTCTTTCCGTAAGTGAGAGC
TCATTAGGGTTAAGAATAGGGTTTTAGATGCGTTTTTGTTTCTGATTCGA
ATCAACATGGAGAGTACGCGCAGAACCTTGGATAGATCTAGAGAACTGGG
TTCCAAGAAGCCTCGATTGATCGATGAACTCAGTGCCCGACAGTTACCTC
AACGACAGCAAGGGTCCGGGGTAGTTGCTTCCTTGGTGTCTGCAAGGGCT
CGAGTAAATGATAGGGACTCCGAAAGCAGCGAATCCGGTCGCGGGGGTGG
GTACcagcctcagccgcagcctcaccatgagcttgtgactcagTATAAGA
CCGCTCTTGCTGAGCTTACTTTCAATTCAAAGCCTATAATTACGAACTTG
ACTATTATAGCCGGAGAGAATCAGTCTGCTGCCAAGGCAATTGCCGACAC
TGTTTGTGCTAACATTCTAGAGGTTCCAAGTGATCAAAAACTGCCGTCTC
TTTATCTCTTAGACAGTATTGTTAAGAACATCGGGCGGGATTATATAAAG
TATTTTGCTGTCAGATTACCTGAGGTATTCTGCAAGGCTTACAGACAGGT
TGATCCTATTGTCCATTCAAGTATGAAACATCTTTTTGGAACTTGGAAAG
GAGTCTTTCCTCCTCAGTGCCTTCAGATGATTGAGAAGGAGCTTGGCTTT
ACACCTGCAGTCAATGGTTCAGCTTCAGTATCTGCTACAGTCAGGAATGA
TTTGCAGTCACAACGCCCTCCTCACAGTATCCATGTGAATCCAAAGTATT
TAGAAAGGCAGCGTCTCCAGCAGTCAAGTACGAGTAAAGGAGTTGTTGAT
GACATGACTGGAGCTTTGTTAACCTCAAATGAGGATTCAGAGAGGCCAAA
TAGAGCTTTGGGTGCTTCTCGACCATGGCTGGATCCTAGGATTAACATGC
TTAATAATCAGCACACACAGAGAGATGCATTTAATGATTCTGTTCCTGAG
AAGAGCATTGATGGATCATTTGGAGGCAGTCAATATGGTTCTGGCATTTC
TAGTAATTTGGTCTCAGGGGCTGGAAGAACTGGAACTAAGCTCATTGATT
TAGGGCAAGAAAAAACATGGTCCAAAACAGATGGTGGTGATGCAGAGACC
ATATCTGGGCAAAAAAACGGTTTCAGTCTCAAGCGTAGTCTTTCAACTCG
TGAAGCACCAAAGTCCATAAATTTGAAAGCACAACGTCGGCCAGGCCTAA
CTTTAACTCAGATATGGAACAATATGATGTCAGATAACTGGAAAAATTCC
GAAGAGGAGGAGTTCACGTGGGATGAGATGAACTCTGGTTTGACTGATCA
TGGACCTAATGTGTCCAGCAATTTGAGCACAGATTCATGGATGACAGATG
ATGAAAATTTGGAAGGTGAAGATCACCTACATATTCAACACCCTTATGGG
GTAAAGGTTGATAAGGAAATATCCACTGTTAAGAAACAACTGCCTGGTTT
TGGTGGCCATCCACCTTCATCATGGCAGTTGCAGAAGCATCACACAATTG
ATAAGTTGAATCTGAAGCCAGGTTACTCAGAAGGATTTGTGTCCACTATT
AGTGGCTTACCAGCCAACGCAAGTTCTTTACCTATCAAGAAGGGGAACCA
GTCTTTTACGTCAAAGGCAATAGTAGGATTGTCCAAAACTGTAGAGCCAC
AATTTGATTCTGGGGAGACCGAATCCCCTTCTGGGCAGTCACCTTTGCAT
CGACAGTCTCCATCACTGCCAGGAGCAGTATACCACCCTCATTCAATGCA
AAATTTGCCTGAGCAAGAAATGCCCCAGGATCTCAAAACATCTCAATTTT
TGGGAGGTCCAACTAGTCAGCCCATTAGAGATCGCTCACCTACCCTTCAT
CCCGTCGTTCAGGTTGGTAACATGCGAAGAACACAGGAAAAGGACATGCA
GGGCACGTTTCAACCAAAGCTTCAGCAACAGCAGCTCGACTCTTCTCAGG
CTGAAGTTTTTGCCAAAACTAAGCTGCCGCCCCTGTCTAAAGTTTCTTTA
ACCAAAGAAGTTTCAGAACAGTCAACCAAGAATAATTTGTCAGCTGCAGC
TGTGAAGAGTGGAATCATTCCCAAGAAATCAATTACCAGTAATCTGGATC
CAAGGAAGCATCTATCCAAGTCTGGGGTTCAGCTTCCTCCTTCTGGCAGG
TCTTCTCCTGCAACATTAATTTCTTCGGGGTCTGCAGTGGCATCAACATC
TTTATTGGATCCTCTGCACAAAGATTCATCTTCGCTGCCCAAAAAACCTC
AAGGAAAGGCTGGACAACCGCCACAAAGGCCTTCTACTCAGCCACCTGCT
TCCTCTAATGTGAATGCTGCAAAAAGTAATGTAAACCCAATCGCAAACCT
TTTAAGTTCATTGGTTGCAAAGGGTTTGATATCTGCAGAAACTGAATCAC
CGACTATGGTACCAAGCGAGGTGCTGAAAGGATCCAGAGATAAAACTGTA
AACATCATTACCAGTAGCTCTTTCCCAGTTACATCAGTTTCTGATTCCGC
AGCTGTCCCAGCATCATCTACCACCAGAGATGAGGAAGACGCTGCTACAA
AATCTTCTCTTCCCTCAGCTCAATCAACTAGCACGAAAATCAGAAATCTC
ATTGGCTTTGATTTTAAACCTAATGTAATTCGAGAATTCCATGAACCGGT
AATTAGGGAATTATTGGATGATTTCCCTCATCATTGCAAAAGTTGCGGTA
TTAGGTTTAAACCAGAAGAACAGTATAAGAGACACTTGGAGTGGCATGCC
ACAAGAGAGCATGGTCCAATTAAAGTATCCAGAAGTTGGTATGCGAAGTC
AAGTGATTGGATTGCTGGCAAGGTAGACTATTCATCTGAGCTTGAGTTTA
CCGACTCTGTTGTTGTACACGACAAAGAAACAGAAAGCAGTCATTTGGAA
ACGATGATTCGAGCAGATGAAAATCAGTGTTTGTGTGTATTGTGTGGCGA
GCTATTTGAAGATGTATACTGTCACGAAAGGAACGAGTGGATGTTCAAAG
GGGCCGTTTACATGAACTGCTCGGATTACAATGATGAGATGGAAAGTAGA
AATGTGGGTCCCATCATTCATGCCAAATGCTTATCAGAGAACTCAATGTT
CACCAATTTGGGTAATGATTAATGGTTTGCCTCCATAGCATTGCCCAATG
GTGTAGTCGGAAGCTTACCAAGGGTATCCACCCAGTTTCACATTGCATAC
TAAATTTTGATGATCCTTTATACTCAAAATTTATTGCCTCTAACTGGTTC
TTAGAGCGGTTAAACAAATTTTGTGCTCTTTTTTGGTTATTGTACTTTTA
CCCGGGAAAAAAATTGCGTAGTGTTCAACTATATAATTGAGCTAAACTTA
ATCGTCGATAGTGCATTTAACATATCTGGCGATAATCACTAGGCAAATAA
CTGTGCCCATGGTAATCCAAATATACGATAACGTTATCTGCAGCAACAAA
AAAAACCACGATCTTAATTTCCCTCGTTATTTTCCGTAGTTAAATTTGTT
AAGGAGGGATTGAAAGTAACTACTCTCAGTTGGATGCTCCCATCCCAACA
AAGTTTGACGTTAAAACAATTTTCATACCTTAGGAGATTTTCATCCCATC
TAAGTTTCTAGTCACCCCTTTTTTCACTGTGTATATGTGTTAATAATTTC
TCCACCTCTGGATAAAAATCAAATACTTAAATAGTTGAATGGTTACGTAT
TGATAAGTTCATTCTTTCGATGTTATTTACTAGTTTTTTCCTCAAAAAAC
ATTATCTCTCATGCTGTTGCACGCAACATGGAACCATTGAACATTGTTAT
CTGATAGTTAACCATGTTTCCATTGTGCAAAGCTAATTTTAGCCATTGGA
TATATTTTGGTTTTAAAATTTATAGTTGATATTTTTTCCATTTTCCTTCA
CCCCACCACGAC
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protein sequence of Vigun01g169900.1_Vu_IT97K-499-35_v1.1

>Vigun01g169900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g169900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g169900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=1022bp
MESTRRTLDRSRELGSKKPRLIDELSARQLPQRQQGSGVVASLVSARARV
NDRDSESSESGRGGGYQPQPQPHHELVTQYKTALAELTFNSKPIITNLTI
IAGENQSAAKAIADTVCANILEVPSDQKLPSLYLLDSIVKNIGRDYIKYF
AVRLPEVFCKAYRQVDPIVHSSMKHLFGTWKGVFPPQCLQMIEKELGFTP
AVNGSASVSATVRNDLQSQRPPHSIHVNPKYLERQRLQQSSTSKGVVDDM
TGALLTSNEDSERPNRALGASRPWLDPRINMLNNQHTQRDAFNDSVPEKS
IDGSFGGSQYGSGISSNLVSGAGRTGTKLIDLGQEKTWSKTDGGDAETIS
GQKNGFSLKRSLSTREAPKSINLKAQRRPGLTLTQIWNNMMSDNWKNSEE
EEFTWDEMNSGLTDHGPNVSSNLSTDSWMTDDENLEGEDHLHIQHPYGVK
VDKEISTVKKQLPGFGGHPPSSWQLQKHHTIDKLNLKPGYSEGFVSTISG
LPANASSLPIKKGNQSFTSKAIVGLSKTVEPQFDSGETESPSGQSPLHRQ
SPSLPGAVYHPHSMQNLPEQEMPQDLKTSQFLGGPTSQPIRDRSPTLHPV
VQVGNMRRTQEKDMQGTFQPKLQQQQLDSSQAEVFAKTKLPPLSKVSLTK
EVSEQSTKNNLSAAAVKSGIIPKKSITSNLDPRKHLSKSGVQLPPSGRSS
PATLISSGSAVASTSLLDPLHKDSSSLPKKPQGKAGQPPQRPSTQPPASS
NVNAAKSNVNPIANLLSSLVAKGLISAETESPTMVPSEVLKGSRDKTVNI
ITSSSFPVTSVSDSAAVPASSTTRDEEDAATKSSLPSAQSTSTKIRNLIG
FDFKPNVIREFHEPVIRELLDDFPHHCKSCGIRFKPEEQYKRHLEWHATR
EHGPIKVSRSWYAKSSDWIAGKVDYSSELEFTDSVVVHDKETESSHLETM
IRADENQCLCVLCGELFEDVYCHERNEWMFKGAVYMNCSDYNDEMESRNV
GPIIHAKCLSENSMFTNLGND*
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mRNA from alignment at Vu01:35180809..35187492+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g169900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g169900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g169900.1; organism=Vigna unguiculata; type=mRNA; length=6684bp; location=Sequence derived from: Vu01:35180809..35187492+ (Vigna unguiculata
AATATTTTTCAACCAAGATCACAGTTGAACGTGAAAATAGCACCTTCAGG
CACTGTGGCTTTCATTGGTAACGCATACAATCCCAATCCCCAATGCGCAG
TTCGCTTATATAAACACACTACCTCTCTTCCTACCTTCATCTGTATCTCT
ATTTCTTTCTCTCTCTCGTAACTTTTTTTATTAATTCTTGTAAATTAGGA
TTAGGGTTTATATCAATTTGCACTGTACAATTTAAATCAGAACCTTGTGT
TCTCATGCATTCCTCTTTTCTTCAAATAAAACCGGTCCTAGAACCAATCA
AGGGGATGCTATTTCGTGCCCCAAATCCAGTTCTTTCCGTAAGTGAGAGC
TCATTAGGGTTAAGAATAGGGTTTTAGATGCGTTTTTGTTTCTGATTCGA
ATCAACATGGAGAGTACGCGCAGAACCTTGGATAGATCTAGAGAACTGGG
TTCCAAGAAGCCTCGATTGATCGATGAACTCAGTGCCCGACAGTTACCTC
AACGACAGCAAGGGTCCGGGGTAGTTGCTTCCTTGGTGTCTGCAAGGGCT
CGAGTAAATGATAGGGACTCCGAAAGCAGCGAATCCGGTCGCGGGGGTGG
GTACCAGCCTCAGCCGCAGCCTCACCATGAGCTTGTGACTCAGTATAAGA
CCGCTCTTGCTGAGCTTACTTTCAATTCAAAGCCTATAATTACGAACTTG
ACTATTATAGCCGGAGAGAATCAGTCTGCTGCCAAGGCAATTGCCGACAC
TGTTTGTGCTAACATTCTAGAGGTGAACAAAATGTGCTGCCCGTGCGTAT
TGAATTGAACTGTAATGGATTTTTGGAATAAAGCAAGAACAATTCGACTT
GAATTCTATGATTTGTGATATTTGGTGTTTGTTATTGTTTTTTAATGTAT
GGGATGATGAATTGGATTGTTGTTGTAGATTGAAATGCTAGAGGAAAAGG
GACATCCATCGTTTGTTGAATATCACCTTATCTTATTGGCCCTGTGAGAG
TAGATTGGTTTTTAAGTGGTGCTTTATGTCCTGCACCTAAAATCCTTTTG
AAGCATATTTAGTTCTCTAATTAGCATTATGAAGAGAAGTTGTCCTTTTG
CCAAATGACGGTAGTTTGGTTAATTTTAAATCGGTGTTTGACTGGTAATC
ACACTGGGAAGTGGTTCTCCACAATTTGCTAGGTGTTTTCTTCATTTTTT
ATGCAAAAGGGATTAATAATCTTGGTAAACATTGATTTTTCCTGTGACAA
CTACGGAATCATTAAACAGTTTTCATTCTTAAATACCCGAAGGTATAGCT
TTATCACCTGTATTAGTCCTGGTGGATTTGAGCAGAATTGCCTCTCATAG
GTGATAACACTAGTCTTAAACCAGAACCAGTTACTAATCTCAATCAGTAA
TAAAGTTTGATTATGAAATTCTGTGCCAACTTCTGATTGGATTATACATT
GTTTTCAGCTGTTTTCCCTGTTTGCATCTGTCATGACAATCTTATTCTTG
TCATCGTGTTTTTTAACTTTAGAAAAAAGGTATAGTGTAATTGAAACAAG
TTAATGACATTCCAGGTTCCAAGTGATCAAAAACTGCCGTCTCTTTATCT
CTTAGACAGTATTGTTAAGAACATCGGGCGGGATTATATAAAGTATTTTG
CTGTCAGATTACCTGAGGTCAGATACTCACTATCCTTAACCATTATCTTC
ATGCCTTTATTTTGATACACTTTTTATTATATATGATGAATCCTTTGGAC
AGTGAAGTTTTTAAATTTTATACTGAACTGTTCTGACACTAGATTAAGTG
ACTCGTGAGATTGTTAAGTTATATACTCATAATGAAATGGAAACAATTTT
TCCCTATGCATTTTTGCTTTGACATATGTTTTCTAATTCTATACACCTAT
TTTTAACTAGGTACTACTACTTTACATTTTAGGTATTCTGCAAGGCTTAC
AGACAGGTTGATCCTATTGTCCATTCAAGTATGAAACATCTTTTTGGAAC
TTGGAAAGGAGTCTTTCCTCCTCAGTGCCTTCAGATGATTGAGAAGGAGC
TTGGCTTTACACCTGCAGTCAATGGTTCAGCTTCAGTATCTGCTACAGTC
AGGAATGATTTGCAGTCACAACGCCCTCCTCACAGTATCCATGTGAATCC
AAAGTATTTAGAAAGGCAGCGTCTCCAGCAGTCAAGTACGGTATGTGAAC
CATTGCACCAAAAACTTGTTCTTTAAAGGTCTGGATAGTTGCATTTTGAA
AGGAAAATTCAAGCTTTGATACTGTTACAAATTTTTATGTGATGAATTGA
AATTTGCAGTCATGTGTTCCTTGGATGTTGAAATGAATGGAAGACATGTA
ATTGGCATCCAATTTTGATCTTTATTTTGATACACTATACAGTATTTTCA
ATTGGAATTTTTCCATTAAACTACTTTAAATTTCTCTTGATCATAAATTT
CCATGATTTTGTGGTTCTAATTATGATTTGGCAGGTGATGATATATATGT
GCTATTAACCTTGCTAGGGTTTAGTTTAAAGTAATATTTTGAATGCCATC
TCCCTATTATTTTCATATACATATACCAGTCTTTTCATCCACTATCACTT
GTACTTATTTCTTTTGCCGTCTCCTTTTTTAATGCCATGAAGAGTAAAGG
AGTTGTTGATGACATGACTGGAGCTTTGTTAACCTCAAATGAGGATTCAG
AGAGGCCAAATAGAGCTTTGGGTGCTTCTCGACCATGGCTGGATCCTAGG
ATTAACATGCTTGTATGTGATCTAGCTGTTTCCTTTTCCTCTTTATGCTA
TTATCTCTCGCAGCTGTTGTATCTTAATGTAGTGATGTGTATTGCAGAAT
AATCAGCACACACAGAGAGATGCATTTAATGATTCTGTTCCTGAGAAGAG
CATTGATGGATCATTTGGAGGCAGTCAATATGGTTCTGGCATTTCTAGTA
ATTTGGTCTCAGGGGCTGGAAGAACTGGAACTAAGCTCATTGATTTAGGG
CAAGAAAAAACATGGTCCAAAACAGATGGTGGTGATGCAGAGACCATATC
TGGGCAAAAAAACGGTTTCAGTCTCAAGCGTAGTCTTTCAACTCGTGAAG
CACCAAAGTCCATAAATTTGAAAGCACAACGTCGGCCAGGCCTAACTTTA
ACTCAGATATGGAACAATATGATGTCAGATAACTGGAAAAATTCCGAAGA
GGAGGAGTTCACGTGGGATGAGATGAACTCTGGTTTGACTGATCATGGAC
CTAATGTGTCCAGCAATTTGAGCACAGATTCATGGATGACAGATGATGAA
AATTTGGTAAGCTTGCTAAAAGGGTCAGTTGCACTGCCATTTTGTTTGCG
ATTTTTCTACTAATTTATAAAATGAAGTACATTCCTTTGTTATGTAACAT
GATTCTATTTGAAATGATCCTCCAAATTTATAAAACTCCTGCTAATTTTA
GAAACCCTTTTCCTACTACTACATTTTTCACAAAGCAATCAAGACTGGTT
AATGTGGCTAATTTCGATCAGAAAACTCCACTTACTATGTGAGTTTTTTC
ACTTTCAGCAAAAACTAGAACATCATTTAGTGTTACTCTTCCCCTTAAAA
AGTTGCTCTTTTCTAAGCTTCGAATTATGAGACAATCCCTATCTTGAAAT
ATAGGGGACATTACAGATAATCATATTAAAGGAAGAGGCCAATTTCTTGA
TAGTGAGGGCAATTGAACTAAATAGCGTGCGTGGTAACATGCAGTTGCCC
CAAATATTTTAAATTGTGTATAACAAGAAAAGTTGTTTTGTAATCAGTCT
AAGGCCAAAAGCACGAATTCCCTTAGATAACTTGCCTAACAAGCACTGAT
ATATCAAAGTCGAGCAATCCAAAGTTTTAAAAAGCCTAATACAAACTAAG
AATAAAACTCTAATTTAATTTGGTATAAGATATCCTGGTTCTCTACTTTC
AAATCCTGGTAGTTAAACCACTTAATCCCTAAATCCAAAATTATCTGAAA
CTTCATAAATTTCAATGGATATACATGACTGATTTATTTTTTCAATGTGC
AGGAAGGTGAAGATCACCTACATATTCAACACCCTTATGGGGTAAAGGTT
GATAAGGAAATATCCACTGTTAAGAAACAACTGCCTGGTTTTGGTGGCCA
TCCACCTTCATCATGGCAGTTGCAGAAGCATCACACAATTGATAAGTTGA
ATCTGAAGCCAGGTTACTCAGAAGGATTTGTGTCCACTATTAGTGGCTTA
CCAGCCAACGCAAGTTCTTTACCTATCAAGAAGGGGAACCAGTCTTTTAC
GTCAAAGGCAATAGTAGGATTGTCCAAAACTGTAGAGCCACAATTTGATT
CTGGGGAGACCGAATCCCCTTCTGGGCAGTCACCTTTGCATCGACAGTCT
CCATCACTGCCAGGAGCAGTATACCACCCTCATTCAATGCAAAATTTGCC
TGAGCAAGAAATGCCCCAGGATCTCAAAACATCTCAATTTTTGGGAGGTC
CAACTAGTCAGCCCATTAGAGATCGCTCACCTACCCTTCATCCCGTCGTT
CAGGTTGGTAACATGCGAAGAACACAGGAAAAGGACATGCAGGGCACGTT
TCAACCAAAGCTTCAGCAACAGCAGCTCGACTCTTCTCAGGCTGAAGTTT
TTGCCAAAACTAAGCTGCCGCCCCTGTCTAAAGTTTCTTTAACCAAAGAA
GTTTCAGAACAGTCAACCAAGAATAATTTGTCAGCTGCAGCTGTGAAGAG
TGGAATCATTCCCAAGAAATCAATTACCAGTAATCTGGATCCAAGGAAGC
ATCTATCCAAGTCTGGGGTTCAGCTTCCTCCTTCTGGCAGGTCTTCTCCT
GCAACATTAATTTCTTCGGGGTCTGCAGTGGCATCAACATCTTTATTGGA
TCCTCTGCACAAAGATTCATCTTCGCTGCCCAAAAAACCTCAAGGAAAGG
CTGGACAACCGCCACAAAGGCCTTCTACTCAGCCACCTGCTTCCTCTAAT
GTGAATGCTGCAAAAAGTAATGTAAACCCAATCGCAAACCTTTTAAGTTC
ATTGGTTGCAAAGGGTTTGATATCTGCAGAAACTGAATCACCGACTATGG
TACCAAGCGAGGTGCTGAAAGGATCCAGAGATAAAACTGTAAACATCATT
ACCAGTAGCTCTTTCCCAGTTACATCAGTTTCTGATTCCGCAGCTGTCCC
AGCATCATCTACCACCAGAGATGAGGAAGACGCTGCTACAAAATCTTCTC
TTCCCTCAGCTCAATCAACTAGCACGAAAATCAGAAATCTCATTGGCTTT
GATTTTAAACCTAATGTAATTCGAGAATTCCATGAACCGGTAATTAGGGA
ATTATTGGATGATTTCCCTCATCATTGCAAAAGTTGCGGTATTAGGTTTA
AACCAGAAGAACAGTATAAGAGACACTTGGAGTGGCATGCCACAAGAGAG
CATGGTCCAATTAAAGTATCCAGAAGTTGGTATGCGAAGTCAAGTGATTG
GATTGCTGGCAAGGTAGACTATTCATCTGAGCTTGAGTTTACCGACTCTG
TTGTTGTACACGACAAAGAAACAGAAAGCAGTCATTTGGAAACGATGATT
CGAGCAGATGAAAATCAGTGTTTGTGTGTATTGTGTGGCGAGCTATTTGA
AGATGTATACTGTCACGAAAGGAACGAGTGGATGTTCAAAGGGGCCGTTT
ACATGAACTGCTCGGATTACAATGATGAGATGGAAAGTAGAAATGTGGGT
CCCATCATTCATGCCAAATGCTTATCAGAGAACTCAATGTTCACCAATTT
GGTAAGAGACCTGTTATGATATAGATATCTTTCATTTTGTTATACTTTAG
GTAGTAATTTGATTGGAGTATTTTTTTTGCAGGGTAATGATTAATGGTTT
GCCTCCATAGCATTGCCCAATGGTGTAGTCGGAAGCTTACCAAGGGTATC
CACCCAGTTTCACATTGCATACTAAATTTTGATGATCCTTTATACTCAAA
ATTTATTGCCTCTAACTGGTTCTTAGAGCGGTTAAACAAATTTTGTGCTC
TTTTTTGGTTATTGTACTTTTACCCGGGAAAAAAATTGCGTAGTGTTCAA
CTATATAATTGAGCTAAACTTAATCGTCGATAGTGCATTTAACATATCTG
GCGATAATCACTAGGCAAATAACTGTGCCCATGGTAATCCAAATATACGA
TAACGTTATCTGCAGCAACAAAAAAAACCACGATCTTAATTTCCCTCGTT
ATTTTCCGTAGTTAAATTTGTTAAGGAGGGATTGAAAGTAACTACTCTCA
GTTGGATGCTCCCATCCCAACAAAGTTTGACGTTAAAACAATTTTCATAC
CTTAGGAGATTTTCATCCCATCTAAGTTTCTAGTCACCCCTTTTTTCACT
GTGTATATGTGTTAATAATTTCTCCACCTCTGGATAAAAATCAAATACTT
AAATAGTTGAATGGTTACGTATTGATAAGTTCATTCTTTCGATGTTATTT
ACTAGTTTTTTCCTCAAAAAACATTATCTCTCATGCTGTTGCACGCAACA
TGGAACCATTGAACATTGTTATCTGATAGTTAACCATGTTTCCATTGTGC
AAAGCTAATTTTAGCCATTGGATATATTTTGGTTTTAAAATTTATAGTTG
ATATTTTTTCCATTTTCCTTCACCCCACCACGAC
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Coding sequence (CDS) from alignment at Vu01:35180809..35187492+

>Vigun01g169900.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g169900.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g169900.1; organism=Vigna unguiculata; type=CDS; length=3066bp; location=Sequence derived from: Vu01:35180809..35187492+ (Vigna unguiculata
ATGGAGAGTACGCGCAGAACCTTGGATAGATCTAGAGAACTGGGTTCCAA
GAAGCCTCGATTGATCGATGAACTCAGTGCCCGACAGTTACCTCAACGAC
AGCAAGGGTCCGGGGTAGTTGCTTCCTTGGTGTCTGCAAGGGCTCGAGTA
AATGATAGGGACTCCGAAAGCAGCGAATCCGGTCGCGGGGGTGGGTACCA
GCCTCAGCCGCAGCCTCACCATGAGCTTGTGACTCAGTATAAGACCGCTC
TTGCTGAGCTTACTTTCAATTCAAAGCCTATAATTACGAACTTGACTATT
ATAGCCGGAGAGAATCAGTCTGCTGCCAAGGCAATTGCCGACACTGTTTG
TGCTAACATTCTAGAGGTTCCAAGTGATCAAAAACTGCCGTCTCTTTATC
TCTTAGACAGTATTGTTAAGAACATCGGGCGGGATTATATAAAGTATTTT
GCTGTCAGATTACCTGAGGTATTCTGCAAGGCTTACAGACAGGTTGATCC
TATTGTCCATTCAAGTATGAAACATCTTTTTGGAACTTGGAAAGGAGTCT
TTCCTCCTCAGTGCCTTCAGATGATTGAGAAGGAGCTTGGCTTTACACCT
GCAGTCAATGGTTCAGCTTCAGTATCTGCTACAGTCAGGAATGATTTGCA
GTCACAACGCCCTCCTCACAGTATCCATGTGAATCCAAAGTATTTAGAAA
GGCAGCGTCTCCAGCAGTCAAGTACGAGTAAAGGAGTTGTTGATGACATG
ACTGGAGCTTTGTTAACCTCAAATGAGGATTCAGAGAGGCCAAATAGAGC
TTTGGGTGCTTCTCGACCATGGCTGGATCCTAGGATTAACATGCTTAATA
ATCAGCACACACAGAGAGATGCATTTAATGATTCTGTTCCTGAGAAGAGC
ATTGATGGATCATTTGGAGGCAGTCAATATGGTTCTGGCATTTCTAGTAA
TTTGGTCTCAGGGGCTGGAAGAACTGGAACTAAGCTCATTGATTTAGGGC
AAGAAAAAACATGGTCCAAAACAGATGGTGGTGATGCAGAGACCATATCT
GGGCAAAAAAACGGTTTCAGTCTCAAGCGTAGTCTTTCAACTCGTGAAGC
ACCAAAGTCCATAAATTTGAAAGCACAACGTCGGCCAGGCCTAACTTTAA
CTCAGATATGGAACAATATGATGTCAGATAACTGGAAAAATTCCGAAGAG
GAGGAGTTCACGTGGGATGAGATGAACTCTGGTTTGACTGATCATGGACC
TAATGTGTCCAGCAATTTGAGCACAGATTCATGGATGACAGATGATGAAA
ATTTGGAAGGTGAAGATCACCTACATATTCAACACCCTTATGGGGTAAAG
GTTGATAAGGAAATATCCACTGTTAAGAAACAACTGCCTGGTTTTGGTGG
CCATCCACCTTCATCATGGCAGTTGCAGAAGCATCACACAATTGATAAGT
TGAATCTGAAGCCAGGTTACTCAGAAGGATTTGTGTCCACTATTAGTGGC
TTACCAGCCAACGCAAGTTCTTTACCTATCAAGAAGGGGAACCAGTCTTT
TACGTCAAAGGCAATAGTAGGATTGTCCAAAACTGTAGAGCCACAATTTG
ATTCTGGGGAGACCGAATCCCCTTCTGGGCAGTCACCTTTGCATCGACAG
TCTCCATCACTGCCAGGAGCAGTATACCACCCTCATTCAATGCAAAATTT
GCCTGAGCAAGAAATGCCCCAGGATCTCAAAACATCTCAATTTTTGGGAG
GTCCAACTAGTCAGCCCATTAGAGATCGCTCACCTACCCTTCATCCCGTC
GTTCAGGTTGGTAACATGCGAAGAACACAGGAAAAGGACATGCAGGGCAC
GTTTCAACCAAAGCTTCAGCAACAGCAGCTCGACTCTTCTCAGGCTGAAG
TTTTTGCCAAAACTAAGCTGCCGCCCCTGTCTAAAGTTTCTTTAACCAAA
GAAGTTTCAGAACAGTCAACCAAGAATAATTTGTCAGCTGCAGCTGTGAA
GAGTGGAATCATTCCCAAGAAATCAATTACCAGTAATCTGGATCCAAGGA
AGCATCTATCCAAGTCTGGGGTTCAGCTTCCTCCTTCTGGCAGGTCTTCT
CCTGCAACATTAATTTCTTCGGGGTCTGCAGTGGCATCAACATCTTTATT
GGATCCTCTGCACAAAGATTCATCTTCGCTGCCCAAAAAACCTCAAGGAA
AGGCTGGACAACCGCCACAAAGGCCTTCTACTCAGCCACCTGCTTCCTCT
AATGTGAATGCTGCAAAAAGTAATGTAAACCCAATCGCAAACCTTTTAAG
TTCATTGGTTGCAAAGGGTTTGATATCTGCAGAAACTGAATCACCGACTA
TGGTACCAAGCGAGGTGCTGAAAGGATCCAGAGATAAAACTGTAAACATC
ATTACCAGTAGCTCTTTCCCAGTTACATCAGTTTCTGATTCCGCAGCTGT
CCCAGCATCATCTACCACCAGAGATGAGGAAGACGCTGCTACAAAATCTT
CTCTTCCCTCAGCTCAATCAACTAGCACGAAAATCAGAAATCTCATTGGC
TTTGATTTTAAACCTAATGTAATTCGAGAATTCCATGAACCGGTAATTAG
GGAATTATTGGATGATTTCCCTCATCATTGCAAAAGTTGCGGTATTAGGT
TTAAACCAGAAGAACAGTATAAGAGACACTTGGAGTGGCATGCCACAAGA
GAGCATGGTCCAATTAAAGTATCCAGAAGTTGGTATGCGAAGTCAAGTGA
TTGGATTGCTGGCAAGGTAGACTATTCATCTGAGCTTGAGTTTACCGACT
CTGTTGTTGTACACGACAAAGAAACAGAAAGCAGTCATTTGGAAACGATG
ATTCGAGCAGATGAAAATCAGTGTTTGTGTGTATTGTGTGGCGAGCTATT
TGAAGATGTATACTGTCACGAAAGGAACGAGTGGATGTTCAAAGGGGCCG
TTTACATGAACTGCTCGGATTACAATGATGAGATGGAAAGTAGAAATGTG
GGTCCCATCATTCATGCCAAATGCTTATCAGAGAACTCAATGTTCACCAA
TTTGGGTAATGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006569CID_dom
IPR008942ENTH_VHS
IPR006903RNA_pol_II-bd
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding