Vigun01g185000.1

Transcript Overview
NameVigun01g185000.1
Unique NameVigun01g185000.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length850
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:36532119..36533351 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
psvuL193Pisum sativum Cameor genome v1aPisum sativum
crvuL220Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0233Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0866Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0545Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0650Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0870Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL410Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR021Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL349Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL326Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL437Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL143Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL342Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL159Cicer arietinum
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR058Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL329Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL503Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr01.1764Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va03G081770.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg31549.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_08027.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_26797Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_00909Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_04G02634.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014639819.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.001G200900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_004494250.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_05495.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat03G0108300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_010907Cajanus cajan Asha genome v1.0Cajanus cajan
XM_058882927.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_07753.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigst.04G234200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-TanjilR_10562Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.5g158320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr01.1001361Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigan.04G401000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Tiffany.R1.5g126640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan03g290700Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g185000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g185000Vigun01g185000_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g185000.1Vigun01g185000.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g185000.1_Vu_IT97K-499-35_v1.1Vigun01g185000.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g185000.1.v1.1.CDS.2Vigun01g185000.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g185000.1.v1.1.CDS.1Vigun01g185000.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g185000.1.v1.1.three_prime_UTR.1Vigun01g185000.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g185000.1.v1.1.five_prime_UTR.1Vigun01g185000.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL212_ARATH (60S ribosomal protein L21-2 OS=Arabidopsis thaliana OX=3702 GN=RPL21E PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 2.662e-103
Identity = 138/164 (84.15%), Postives = 153/164 (93.29%), Query Frame = 1
Query:    1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 492
            MPAGHG+R+RTRD F+RPFRKKG I L+TYLRT+ +GDYVD+KVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVEVNKQ+GNRIIRKRIHVRVEHV  SRC EEF+LRK +ND LKADAKA+GE ISTKRQP+GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct:    1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL211_ARATH (60S ribosomal protein L21-1 OS=Arabidopsis thaliana OX=3702 GN=RPL21A PE=2 SV=2)

HSP 1 Score: 295.434 bits (755), Expect = 5.552e-103
Identity = 138/164 (84.15%), Postives = 152/164 (92.68%), Query Frame = 1
Query:    1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 492
            MPAGHG+R+RTRD F+RPFRKKG I L+TYLRT+ +GDYVD+KVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVEVNKQ+GNRIIRKRIHVRVEHV  SRC EEF+LRK KND+LKA AKA GE ISTKRQP+GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct:    1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL21A_YEAST (60S ribosomal protein L21-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21A PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.873e-52
Identity = 80/157 (50.96%), Postives = 108/157 (68.79%), Query Frame = 1
Query:    1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMV--EGATLETVTPIPYD 465
            M   HG RSRTR  F R FRK G + L+TYL+ Y +GD VDIK NG++ KGMPHKFY G+TG V+NVTK ++GV +NK VGNR + KR+++RVEH+  S+C +EF  R   N   +A+AKA+G  +  KRQP  P+   +V  EG   +T+ P+PY+
Sbjct:    1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL21_DICDI (60S ribosomal protein L21 OS=Dictyostelium discoideum OX=44689 GN=rpl21 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.130e-52
Identity = 85/159 (53.46%), Postives = 104/159 (65.41%), Query Frame = 1
Query:    1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMVEGATLE--TVTPIPYDVV 471
            MP   GLR+RTR  FSR FR  G +  TT+LRT+ +GDYVDIK  G VHKGMPHKFYHGRTGRVWNVT RA+GV +NK+VG RII K+IHVR EHV PS        R  +N +   +AK  G+ +  +R P  PK GF V     E   V P+ Y+++
Sbjct:    1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAKKAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL21B_YEAST (60S ribosomal protein L21-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21B PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 4.898e-52
Identity = 79/157 (50.32%), Postives = 108/157 (68.79%), Query Frame = 1
Query:    1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMV--EGATLETVTPIPYD 465
            M   HG RSRTR  F R FRK G + ++TYL+ Y +GD VDIK NG++ KGMPHKFY G+TG V+NVTK ++GV +NK VGNR + KR+++RVEH+  S+C +EF  R   N   +A+AKA+G  +  KRQP  P+   +V  EG   +T+ P+PY+
Sbjct:    1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL21_CYAPA (60S ribosomal protein L21 OS=Cyanophora paradoxa OX=2762 GN=RPL21 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.750e-51
Identity = 86/158 (54.43%), Postives = 110/158 (69.62%), Query Frame = 1
Query:    1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAK-AKGEKISTKRQPEGPKPGFMV--EGATLETVTPIPYD 465
            MP  +G R+RTR  F+R F+  G + L+TYL  + IG+YVD+  N AVHKGMP K+YHGRTG VWNVTKRAIGVE+NK+V +RII+KRIHVR++HV  S C + F  R  +ND++K DA  AK    STKR P  PK G ++  +G   ET   IPY+
Sbjct:    1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL21B_SCHPO (60S ribosomal protein L21-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2102 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.723e-50
Identity = 79/157 (50.32%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMVEGATLETVT--PIPYD 465
            MP  +G+R+RTR +F R FR+ G I L+TYL+TY +GD VDIKVNGAV KGMPHK+YHG+TG V+NVT+ ++GV + K VGNR + KR++VR+EHV  S+C ++F  R   N+  + +AKA+G+ +  +RQP  P     V     E VT  P+ YD
Sbjct:    1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL21A_SCHPO (60S ribosomal protein L21-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2101 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.120e-50
Identity = 79/157 (50.32%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    1 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMVEGATLETVT--PIPYD 465
            MP  +G+R+RTR +F R FR+ G I L+TYL+TY +GD VDIKVNGAV KGMPHK+YHG+TG V+NVT+ ++GV + K VGNR + KR++VR+EHV  S+C ++F  R   N+  + +AKA+G+ +  +RQP  P     V     E VT  P+ YD
Sbjct:    1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL21_PIG (60S ribosomal protein L21 OS=Sus scrofa OX=9823 GN=RPL21 PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.297e-45
Identity = 79/154 (51.30%), Postives = 100/154 (64.94%), Query Frame = 1
Query:   16 GLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMV--EGATLETVTPIPYDVV 471
            G R  TR  FSRPFRK G + L TY+R Y  GD VDIK  G V KGMPHK YHG+TGRV+NVT+ A+G+ VNKQV  +I+ KRI+VR+EH+  S+  + F  R  +NDQ K +AK KG  +  KRQP  P+    V   G   E + PIPY+ +
Sbjct:    6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFM 159          
BLAST of Vigun01g185000.1 vs. DB:Swiss
Match: RL21_HUMAN (60S ribosomal protein L21 OS=Homo sapiens OX=9606 GN=RPL21 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.297e-45
Identity = 79/154 (51.30%), Postives = 100/154 (64.94%), Query Frame = 1
Query:   16 GLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMV--EGATLETVTPIPYDVV 471
            G R  TR  FSRPFRK G + L TY+R Y  GD VDIK  G V KGMPHK YHG+TGRV+NVT+ A+G+ VNKQV  +I+ KRI+VR+EH+  S+  + F  R  +NDQ K +AK KG  +  KRQP  P+    V   G   E + PIPY+ +
Sbjct:    6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFM 159          
The following BLAST results are available for this feature:
BLAST of Vigun01g185000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RL212_ARATH2.662e-10384.1560S ribosomal protein L21-2 OS=Arabidopsis thalian... [more]
RL211_ARATH5.552e-10384.1560S ribosomal protein L21-1 OS=Arabidopsis thalian... [more]
RL21A_YEAST1.873e-5250.9660S ribosomal protein L21-A OS=Saccharomyces cerev... [more]
RL21_DICDI3.130e-5253.4660S ribosomal protein L21 OS=Dictyostelium discoid... [more]
RL21B_YEAST4.898e-5250.3260S ribosomal protein L21-B OS=Saccharomyces cerev... [more]
RL21_CYAPA7.750e-5154.4360S ribosomal protein L21 OS=Cyanophora paradoxa O... [more]
RL21B_SCHPO1.723e-5050.3260S ribosomal protein L21-B OS=Schizosaccharomyces... [more]
RL21A_SCHPO2.120e-5050.3260S ribosomal protein L21-A OS=Schizosaccharomyces... [more]
RL21_PIG1.297e-4551.3060S ribosomal protein L21 OS=Sus scrofa OX=9823 GN... [more]
RL21_HUMAN1.297e-4551.3060S ribosomal protein L21 OS=Homo sapiens OX=9606 ... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036948Ribosomal protein L21 superfamilyGENE3D2.30.30.70coord: 1..97
e-value: 8.0E-48
score: 162.4
IPR001147Ribosomal protein L21ePFAMPF01157Ribosomal_L21ecoord: 1..101
e-value: 8.9E-46
score: 153.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..138
IPR018259Ribosomal protein L21e, conserved sitePROSITEPS01171RIBOSOMAL_L21Ecoord: 37..62
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 3..99

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g185000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g185000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g185000.1; organism=Vigna unguiculata; type=mRNA; length=850bp
CCTTCTACGTCTACCCCAAGCCGAACGCAGAGAGCGAGAGAGAAACCCTA
GGTAAGAAAAAATGCCGGCTGGTCACGGTTTGAGATCTCGCACCAGAGAT
TCATTCTCTCGTCCCTTCAGGAAGAAGGGAACCATCGCCCTCACCACTTA
TCTCCGAACTTATCACATCGGCGACTACGTTGACATCAAGGTTAATGGCG
CCGTCCACAAGGGTATGCCTCACAAGTTCTACCATGGCCGCACCGGTCGC
GTCTGGAACGTCACCAAACGCGCCATTGGTGTCGAGGTTAACAAACAGGT
GGGGAACAGAATTATTAGGAAGAGGATTCATGTGCGTGTTGAGCACGTGA
TGCCTTCAAGGTGCACCGAGGAGTTCCGTTTGAGGAAGATCAAGAATGAT
CAACTCAAGGCGGATGCTAAGGCAAAGGGTGAGAAAATTAGCACCAAGAG
ACAACCTGAGGGTCCCAAACCAGGTTTTATGGTTGAAGGAGCTACATTGG
AGACTGTCACTCCCATTCCCTATGACGTGGTCAATGATCTTAAAGGAGGA
TATTAGTTTTTTTTTACTGTTTGTTGGTTTGCCCAGTTGTGTTTTAGTTT
TAGTTTACCCGTTCTAAGACTACTTGTAAACAATTTTGGTGGTTTGATTC
TCTAAATACAGTTATATTTCATATTTTGTTCGGTATTTAATGGTTTTTAC
ATCCTGTGATTTGGGTATAATGTTCTTCATGATTAGCAAGGGTTATATTT
GAATTGCTAGTGTAGAGGATGTATAAGCAGTTTGAGTTGTCTTTGATAAA
ACGTCATTTCCATTATATTGTTGTTCAGGAGCCCTGGATAAATAGACCAA
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protein sequence of Vigun01g185000.1_Vu_IT97K-499-35_v1.1

>Vigun01g185000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g185000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g185000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=165bp
MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIKVNGAVHK
GMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSR
CTEEFRLRKIKNDQLKADAKAKGEKISTKRQPEGPKPGFMVEGATLETVT
PIPYDVVNDLKGGY*
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mRNA from alignment at Vu01:36532119..36533351-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g185000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g185000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g185000.1; organism=Vigna unguiculata; type=mRNA; length=1233bp; location=Sequence derived from: Vu01:36532119..36533351- (Vigna unguiculata
CCTTCTACGTCTACCCCAAGCCGAACGCAGAGAGCGAGAGAGAAACCCTA GGTAAGAAAAAATGCCGGCTGGTCACGGTTTGAGATCTCGCACCAGAGAT TCATTCTCTCGTCCCTTCAGGAAGAAGGGAACCATCGCCCTCACCACTTA TCTCCGAACTTATCACATCGGCGACTACGTTGACATCAAGGTTAATGGCG CCGTCCACAAGGGTATGCCTCACAAGTTCTACCATGGCCGCACCGGTCGC GTCTGGAACGTCACCAAACGCGCCATTGGTGTCGAGGTTAACAAACAGGT ATTCACTCTCCCGGAAAGCCTAACGCCGTTATTGCTTTTCTTCTGGATTC GTCATAAAGTCTATTTACTATTGTGCATCGTATTATCTATACTCAATGCA TTTGGATTTTTCTTTTCATGTTGTTTTTGTTTTAGTTATTGGTTTTCTCT ATACTTCATGCATTGTTGAGTTTGGTTTGAATGTTTATAGCTGTGCTTTC TAATTCGTATTTTGTTCTTTCGACGCATTACTGTTACCCTATTGGTGTGT TCTAATGCTGTTTTATTTGTTTGGTCTCTTCCTAGGAAATTAATTTTAGT TTATAATATTTTTGTTCTGAACTCGTGGTTATGCCTTTTGAAATAGGGAT TTGTGTTAAATAAGTAGTTTGTATTGTGCAGGTGGGGAACAGAATTATTA GGAAGAGGATTCATGTGCGTGTTGAGCACGTGATGCCTTCAAGGTGCACC GAGGAGTTCCGTTTGAGGAAGATCAAGAATGATCAACTCAAGGCGGATGC TAAGGCAAAGGGTGAGAAAATTAGCACCAAGAGACAACCTGAGGGTCCCA AACCAGGTTTTATGGTTGAAGGAGCTACATTGGAGACTGTCACTCCCATT CCCTATGACGTGGTCAATGATCTTAAAGGAGGATATTAGTTTTTTTTTAC TGTTTGTTGGTTTGCCCAGTTGTGTTTTAGTTTTAGTTTACCCGTTCTAA GACTACTTGTAAACAATTTTGGTGGTTTGATTCTCTAAATACAGTTATAT TTCATATTTTGTTCGGTATTTAATGGTTTTTACATCCTGTGATTTGGGTA TAATGTTCTTCATGATTAGCAAGGGTTATATTTGAATTGCTAGTGTAGAG GATGTATAAGCAGTTTGAGTTGTCTTTGATAAAACGTCATTTCCATTATA TTGTTGTTCAGGAGCCCTGGATAAATAGACCAA
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Coding sequence (CDS) from alignment at Vu01:36532119..36533351-

>Vigun01g185000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g185000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g185000.1; organism=Vigna unguiculata; type=CDS; length=495bp; location=Sequence derived from: Vu01:36532119..36533351- (Vigna unguiculata
ATGCCGGCTGGTCACGGTTTGAGATCTCGCACCAGAGATTCATTCTCTCG
TCCCTTCAGGAAGAAGGGAACCATCGCCCTCACCACTTATCTCCGAACTT
ATCACATCGGCGACTACGTTGACATCAAGGTTAATGGCGCCGTCCACAAG
GGTATGCCTCACAAGTTCTACCATGGCCGCACCGGTCGCGTCTGGAACGT
CACCAAACGCGCCATTGGTGTCGAGGTTAACAAACAGGTGGGGAACAGAA
TTATTAGGAAGAGGATTCATGTGCGTGTTGAGCACGTGATGCCTTCAAGG
TGCACCGAGGAGTTCCGTTTGAGGAAGATCAAGAATGATCAACTCAAGGC
GGATGCTAAGGCAAAGGGTGAGAAAATTAGCACCAAGAGACAACCTGAGG
GTCCCAAACCAGGTTTTATGGTTGAAGGAGCTACATTGGAGACTGTCACT
CCCATTCCCTATGACGTGGTCAATGATCTTAAAGGAGGATATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036948Ribosomal_eL21_sf
IPR001147Ribosomal_eL21
IPR018259Ribosomal_L21e_CS
IPR008991Translation_prot_SH3-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome