Vigun01g215400.1

Transcript Overview
NameVigun01g215400.1
Unique NameVigun01g215400.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1584
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:38915686..38921848 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR043Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL379Pisum sativum Cameor genome v1aPisum sativum
psvuL384Pisum sativum Cameor genome v1aPisum sativum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL580Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL581Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL649Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL092Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL097Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0669Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL456Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0004Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0129Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0387Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0782Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1147Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL211Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL410Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL658Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR009Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR032Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL005Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL005Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL217Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL191Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL418Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL290Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL432Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR036Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL079Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL083Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL421Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL342Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL571Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL080Cicer arietinum
carvuL083Cicer arietinum
carvuL426Cicer arietinum
ccavuL002Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL400Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR030Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR035Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR015Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR069Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL142Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL257Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL273Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL329Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL566Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR033Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_020160Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_21302Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_23874Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan03g260500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg52242.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.2g070360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va03G077970.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.001G230200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat05G0354800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_15371.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_014640411.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
PvulFLAVERTChr01.1001549Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vum_04G02925.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.04G261900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr01.2034.4.62113179Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cr_14477.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004503072.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
XM_058925869.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.04G367500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Tiffany.R1.2g057280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cc_v2.0_00434.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_13289Cicer arietinum CDC Frontier genome v1.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g215400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g215400Vigun01g215400_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g215400.1Vigun01g215400.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g215400.1_Vu_IT97K-499-35_v1.1Vigun01g215400.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g215400.1.v1.1.CDS.6Vigun01g215400.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g215400.1.v1.1.CDS.5Vigun01g215400.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g215400.1.v1.1.CDS.4Vigun01g215400.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g215400.1.v1.1.CDS.3Vigun01g215400.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g215400.1.v1.1.CDS.2Vigun01g215400.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g215400.1.v1.1.CDS.1Vigun01g215400.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g215400.1.v1.1.three_prime_UTR.1Vigun01g215400.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g215400.1.v1.1.five_prime_UTR.2Vigun01g215400.1.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR
Vigun01g215400.1.v1.1.five_prime_UTR.1Vigun01g215400.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THO4D_ARATH (THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.605e-70
Identity = 107/151 (70.86%), Postives = 126/151 (83.44%), Query Frame = 1 
Query:  214 LMVNTRPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSN--AELPVSAR--VNVTGVNGRRKRTVVM 654
            L VN RPSS+ I K +RR R  PWQ  LFED LRAAG  GVEVGT+L+V+NLD GVTNEDIRELFSE+GE++RYA+HYDKNG PSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++EI+G N  +E P+S R  VNVTG+NGR KRTVV+
Sbjct:   49 LAVNARPSSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSEAPLSGRVNVNVTGLNGRLKRTVVI 199
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THO4C_ARATH (THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 3.251e-68
Identity = 103/151 (68.21%), Postives = 127/151 (84.11%), Query Frame = 1 
Query:  214 LMVNTRPSS-YAIAKSIRRTRPFPWQH--DLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAE-LPVSARVNVTGVNGRRKRTVVM 654
            L VNTRPSS ++I K  RR R  PWQ+  DL+E++LRA G+ GVEVGT +Y++NLD GVTNEDIREL++E+GELKRYA+HYDKNG PSGSAEVVY RRSDA  A+++YNNVLLDG+PMK+EI+G N E  PV+ARVNVTG+NGR KR+V +
Sbjct:   60 LAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEILGGNTESAPVAARVNVTGLNGRMKRSVFI 210
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THO4A_ARATH (THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.522e-41
Identity = 88/200 (44.00%), Postives = 111/200 (55.50%), Query Frame = 1 
Query:    1 MASSLDMSLDDRIKNXXXXXXXXXXXXXXXXXXXXXXXALNGGRMAGAVNSRRITGAGNGGRTSGAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQHDLF----EDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAE 588
            M++ LDMSLDD I                         A N     GA  +R               R  P   +TR + Y  AK+   T    W HD+F    ED        G+E GTKLY+SNLD+GV NEDI+ELF+E+GELKRY VH+D++G   G+AEVVY+RR DA AA+K+YN+V LDGKPMKIEIVG+N +
Sbjct:    1 MSTGLDMSLDDMI-------------------------AKNRKSRGGAGPARGTGSGSG---PGPTRRNNPNRKSTRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQ 168
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THO4B_ARATH (THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 4.522e-38
Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = 1 
Query:  202 RRGPLMVNTRPSSYAIAKSIRRTRPFPWQHDLF--EDSLRAA----------GIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAELP 594
            RR    V  R + Y+     ++     WQ+D+F  + S+ AA          G   +E GTKLY+SNLD+GV+NEDI+ELFSE+G+LKRY +HYD++G   G+AEVV++RR DA AA+KRYNNV LDGK MKIEIVG+N   P
Sbjct:   48 RRFANRVGARTAPYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIVGTNLSAP 190
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: ALRF2_MOUSE (Aly/REF export factor 2 OS=Mus musculus OX=10090 GN=Alyref2 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.292e-33
Identity = 79/198 (39.90%), Postives = 104/198 (52.53%), Query Frame = 1 
Query:    1 MASSLDMSLDDRIKNXXXXXXXXXXXXXXXXXXXXXXXALNGGRMAGAVNSRRITGAGNGGRTSGAVRRGPLMVNTRPSSYAIAKSIRRTRPFP--WQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAE 588
            MA  +DMSLDD IK                         LN        N RR+   G   R   A+ RG      RP+ Y+      R +P P  WQHDLF+      G +GVE G KL VSNLD GV++ DI+ELF+E G LK+ AV YD++G   G+A+V + RR+DA  A+K+Y  V LDG+PM I++V S  +
Sbjct:    1 MADKMDMSLDDIIK-------------------------LN-------RNQRRVNRGGGPRRNRPAIARG---GRNRPAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQID 155
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THO4A_XENLA (THO complex subunit 4-A OS=Xenopus laevis OX=8355 GN=alyref-a PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.057e-31
Identity = 64/143 (44.76%), Postives = 90/143 (62.94%), Query Frame = 1 
Query:  229 RPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAEL---PVSARVNVTGVNGRRKRTV 648
            RP+ Y+  K +    P  WQHDLF+    A    G+E G KL VSNLD GV++ DI+ELF+E G LK+ AVHYD++G   G+A+V + R++DA  A+K+YN V LDG+PM I++V S  E    P+ ++    GV   R  T+
Sbjct:   73 RPTPYSRPKQL----PDKWQHDLFDSGFGAGA--GMETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIEAQRRPIQSQSRGGGVTRPRGGTL 209
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THOC4_XENTR (THO complex subunit 4 OS=Xenopus tropicalis OX=8364 GN=alyref PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 6.787e-31
Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1 
Query:  229 RPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAE 588
            RP+ Y+  K +    P  WQHDLF+         G+E G KL VSNLD GV++ DI+ELF+E G LK+ AVHYD++G   G+A+V + R++DA  A+K+YN V LDG+PM I++V S  E
Sbjct:   76 RPAPYSRPKQL----PDKWQHDLFDSGFGTGA--GMETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIE 189
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THOC4_TAEGU (THO complex subunit 4 OS=Taeniopygia guttata OX=59729 GN=ALYREF PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.646e-30
Identity = 78/200 (39.00%), Postives = 103/200 (51.50%), Query Frame = 1 
Query:    1 MASSLDMSLDDRIKNXXXXXXXXXXXXXXXXXXXXXXXALNGGRMAGAVNSRRITGAGNGGRTSGAVRRGPLMV----NTRPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAE 588
            MA  +DMSLDD IK                +          G             G G G    G VR  P+M       RP+ Y+  K +    P  WQHDLF+    A    GVE G KL VSNLD GV++ DI+ELF+E G LK+ AVHYD++G   G+A+V + R++DA  A+K+YN V LDG+PM I++V S  +
Sbjct:    1 MADKMDMSLDDIIK-----------LNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRPVMARGGGRNRPAPYSRPKQL----PEKWQHDLFDSGFGAGA--GVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 183
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THO4B_XENLA (THO complex subunit 4-B OS=Xenopus laevis OX=8355 GN=alyref-b PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.898e-30
Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 1 
Query:  229 RPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAE 588
            RP+ Y+  K +    P  WQHDLF+         G+E G KL VSNLD GV++ DI+ELF+E G LK+ AVHYD++G   G+A+V + R++DA  A+K+YN V LDG+ M I++V S  E
Sbjct:   72 RPTPYSRPKQL----PDKWQHDLFDSGFGTGA--GMETGGKLLVSNLDFGVSDADIQELFAEFGSLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRSMNIQLVTSQIE 185
[Close]
BLAST of Vigun01g215400.1 vs. DB:Swiss
Match: THOC4_MOUSE (THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 2.971e-27
Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1 
Query:  229 RPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAE 588
            RP+ Y+  K +    P  WQHDLF+         GVE G KL VSNLD GV++ DI+ELF+E G LK+ AVHYD++G   G+A+V + R++DA  A+K+YN V LDG+PM I++V S  +
Sbjct:   72 RPAPYSRPKQL----PDKWQHDLFDSGFGGG--AGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 185
The following BLAST results are available for this feature:
BLAST of Vigun01g215400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
THO4D_ARATH2.605e-7070.86THO complex subunit 4D OS=Arabidopsis thaliana OX=... [more]
THO4C_ARATH3.251e-6868.21THO complex subunit 4C OS=Arabidopsis thaliana OX=... [more]
THO4A_ARATH2.522e-4144.00THO complex subunit 4A OS=Arabidopsis thaliana OX=... [more]
THO4B_ARATH4.522e-3851.05THO complex subunit 4B OS=Arabidopsis thaliana OX=... [more]
ALRF2_MOUSE1.292e-3339.90Aly/REF export factor 2 OS=Mus musculus OX=10090 G... [more]
THO4A_XENLA1.057e-3144.76THO complex subunit 4-A OS=Xenopus laevis OX=8355 ... [more]
THOC4_XENTR6.787e-3148.33THO complex subunit 4 OS=Xenopus tropicalis OX=836... [more]
THOC4_TAEGU5.646e-3039.00THO complex subunit 4 OS=Taeniopygia guttata OX=59... [more]
THO4B_XENLA8.898e-3047.50THO complex subunit 4-B OS=Xenopus laevis OX=8355 ... [more]
THOC4_MOUSE2.971e-2748.33THO complex subunit 4 OS=Mus musculus OX=10090 GN=... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..296
NoneNo IPR availableCDDcd12680RRM_THOC4coord: 116..190
e-value: 8.93492E-42
score: 137.001
IPR025715Chromatin target of PRMT1 protein, C-terminalSMARTSM01218FoP_duplication_2coord: 220..296
e-value: 7.6E-15
score: 65.3
IPR025715Chromatin target of PRMT1 protein, C-terminalPFAMPF13865FoP_duplicationcoord: 238..290
e-value: 8.6E-6
score: 26.2
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 117..189
e-value: 1.1E-16
score: 71.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 118..186
e-value: 2.9E-13
score: 49.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 116..193
score: 14.948
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 110..192
e-value: 4.5E-20
score: 73.6
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 110..190

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g215400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g215400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g215400.1; organism=Vigna unguiculata; type=mRNA; length=1584bp
AGCTAGCTCTAAACCCAAAAGCTCTCTTACGCTGAAACCCTAAAACCCCA
TTTTCACCCACACATGCGTGGATCTTTCCTCTCCTTTTTCTTCGAAACCC
TAATCTTCGCCCCCGCTTATATTATTCATCGATCCTTCGTCCCCCAAAAC
ACTCAATAGCACTCTCCCCCTCTTTCCTCTGATTATCGCTTCACAATTCT
CCACCCGCGTTTCTGTTATCATCTGCAGGGCTATATTATTATTGAAATTT
TGTGAAGTGCTTGCTTGAAGTGCGTTAAGTTGTCGTATAATGGCTTCTTC
CTTGGATATGTCACTTGATGATAGAATAAAGAACAGAAGTAACAGAGGAG
GTAGAGGTAGAGGAGGACGTGGCAGGGTCCAGTCTGGTCGTGGGCCTAGC
GGTGCTCTTAATGGAGGAAGAATGGCCGGTGCTGTTAATAGTAGAAGAAT
TACTGGTGCCGGTAATGGTGGAAGAACATCTGGTGCTGTTCGTAGAGGTC
CTCTTATGGTTAACACTCGACCATCATCATATGCTATTGCCAAGTCTATT
CGCAGAACTAGGCCTTTTCCATGGCAGCATGATTTGTTTGAAGATAGCTT
AAGAGCTGCAGGGATTCAAGGAGTAGAAGTTGGCACTAAGTTATATGTTT
CCAACTTGGACCATGGAGTGACCAATGAAGACATAAGGGAACTTTTCTCT
GAGCTTGGAGAGTTGAAGCGTTATGCTGTTCATTATGACAAAAATGGACA
CCCAAGTGGTTCGGCCGAAGTTGTGTATACTAGAAGAAGTGATGCATTTG
CTGCTCTTAAACGATATAATAATGTGCTTTTGGATGGAAAGCCCATGAAG
ATTGAGATTGTTGGTTCCAATGCAGAATTGCCCGTAAGTGCTCGGGTGAA
TGTTACTGGGGTGAATGGACGTAGGAAGAGGACTGTTGTAATGACGCCTA
GAGGTGGACCAGCTGGAGGTCGTGCTATTCCTAATCGTGGTGCTGGTTGG
GGACGTCGTGGTGGCACAAGGAGTGGCAAtggtaggggtcgaggtgctgg
aggtcgtggtcgtggcaatggtcgcggtggagggcgaggccgtggtAGAA
AAGACGGTGTTGAGAAGTCAGCAGAAGAACTTGACAAAGAACTGGAGACC
TATCACGCTGAGGCCATGAACATCTCTTGATGTCGGAATCCTCAGCTTAT
TTTGTATTAAGATTTGGTTCCCTGTACAAAAGTTCGTTTCGTTTGGTGTT
ACTTTAAATCTCTTGCTGCTCGGTGCTTTTAAACATGCCATCTGATTTCA
CACCTCATTTAAGTCTTGTTAGAGAGGCCGCGAATGATCAACCTAGGGAT
TTTGAAGTTCAGTTATAGATTTTAGTTTGATTTGCGTATATTTTTATATA
TTATTGCAGCTGCAAATTTCAAATGTTTTCACAGTTTGAATGTTTATTTC
TTTCTAGTTGCCGATAATAGTGATAATGCACTTGCGACAATACAGTCCGT
ATCGTAGAAGTTAGCAGTTATGCGCATGTATTTGACCTGAAGAAATCCTA
GATCATAATGAATGTCTGGACAACTTACAATTTA
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protein sequence of Vigun01g215400.1_Vu_IT97K-499-35_v1.1

>Vigun01g215400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g215400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g215400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=297bp
MASSLDMSLDDRIKNRSNRGGRGRGGRGRVQSGRGPSGALNGGRMAGAVN
SRRITGAGNGGRTSGAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQHDLF
EDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAVHYD
KNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNAELPVS
ARVNVTGVNGRRKRTVVMTPRGGPAGGRAIPNRGAGWGRRGGTRSGNGRG
RGAGGRGRGNGRGGGRGRGRKDGVEKSAEELDKELETYHAEAMNIS*
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mRNA from alignment at Vu01:38915686..38921848-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g215400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g215400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g215400.1; organism=Vigna unguiculata; type=mRNA; length=6163bp; location=Sequence derived from: Vu01:38915686..38921848- (Vigna unguiculata
AGCTAGCTCTAAACCCAAAAGCTCTCTTACGCTGAAACCCTAAAACCCCA
TTTTCACCCACACATGCGTGGATCTTTCCTCTCCTTTTTCTTCGAAACCC
TAATCTTCGCCCCCGCTTATATTATTCATCGATCCTTCGTCCCCCAAAAC
ACTCAATAGCACTCTCCCCCTCTTTCCTCTGATTATCGCTTCACAATTCT
CCACCCGCGTTTCTGTTATCATCTGCAGGTGATTCTAGTTTTTTTTTTTT
TTTTTTTTGCCTAATTATGTTTTCTCTAATTGGGATTTTTTTTGCTATTG
TGTGGTTGTTTTTTCGTTTAAATGGCTGTGTTAATTATGATAGATAGTGT
TTTTCTTTGCCTAGATCTTTCCACTTTTTCGTTTTTCGCACTTTTTTTTA
AGGTGAGCTTCCCTGGAAATCTCGGATTTTAAATTTGGGGTTAGATTCAT
ACTAGGAAGGTATTTTGTTCAAGGAGACAATTGTTGGAGTTTACCATTGA
TTGCAACGCGTGTATACAAATTTCAGGAATTTCGCTAGGATCTGTTGCTG
AGCGGTTGCGGTTTTCAAATCTTTAATTATTTTAGTCTGCTTAGCTGGGA
TTGGTTGTTCTGTTCTGGGCGTTGTCTGTTTAATTATTATGCTAAAAAAA
TATAGTTTTGGGCACCTTATATATTATGTTTGGATATCTTCCGGACTCGT
TTGTAGCCCTATAAATCACGTTTGAAAACTGAAAAGGTTGAAGCAACAAA
TAGTTGCATTGGGTTGAATATGTGGTGGGATAAGATTATTTTAACTCGCC
TTCCACAAAAGCGCACTAGTAGAGAATCAAACCGAAGTTTTGCGTTATGA
GTTTTAACATCAATTCTGTTATCCCGGATATTCTTTATTGTTTAATATCT
GCGTTGTTCAATTTTATTATGTTTGGGTTGTGTAAGTATACCTTATTTCT
TTGTCTTTGCAGGGCTATATTATTATTGAAATTTTGTGAAGTGCTTGCTT
GAAGTGCGTTAAGTTGTCGTATAATGGCTTCTTCCTTGGATATGTCACTT
GATGATAGAATAAAGAACAGAAGTAACAGAGGAGGTAGAGGTAGAGGAGG
ACGTGGCAGGGTCCAGTCTGGTCGTGGGCCTAGCGGTGCTCTTAATGGAG
GAAGAATGGCCGGTGCTGTTAATAGTAGAAGAATTACTGGTGCCGGTAAT
GGTGGAAGAACATCTGGTGCTGTTCGTAGAGGTCCTCTTATGGTTAACAC
TCGACCATCATCATATGCTATTGCCAAGGCAAGCTCAAAAATCGTGGATG
CTTATACATGTGCTTGAGAATCTGATATGCTAAAAAAATACCCAATTATG
AGACGTTCAGCATTATAGAAACTCAAAAGCAAGTGGAATTCCGCTTCTTT
AGTAGTTGTTCCATGGAGAAGCTCATGCTCGATCATATTTGCATCATCAA
TGCCTTTGTCATAGTTCCATAATGTCACAATTAGTATGAACTTAAGAGTT
TTGCTTTTGTTTTGGGGGGCTTGGCTACAGATCTCTGATGTGTGCAGGAG
TTCTTTCGTGATTCCTGGCATATTATGTGAAGGGGCTTCATTAGGTGAAT
TTCAAAATGGAGCTCTTACAACTAGCACAAAAATCATATAACTATAAGTG
GGGTTAAATTCTCTAAACCATTCTAATCCATTCCATTTACATGAGATGAC
TTTAAGTGTTTGGCTGGTTTTGTGTGGACTGGTATTTTATTGGATCCTCT
TGCTAAGTTCGGTTCTACAGTGCAAGAATTCAGTATACTTCCCTAAATCA
TGGTATTTTGCAAAGGAGCTTTTTCGCTTAGAACCAGAACTGGAGCTCCC
ACTAGTAGCATAACACCGGTTTATATGCAGTGGGTTGAATTCTTACTCCC
ATTTACCATCTTTCACCTAGAACATTGATGTTTGAGTACGAGTTCTCTTG
AATATATATTACCATGGTCAGATCAACTTCGTTAATAGCGTGTTTTGTTT
TTTTATGGAGATTTTCCTGCTCTGACTAATCTTGAAGAATAGTGATTTTT
TCTGGTCATAATCTGATGTGTTCTTTTGCCACTTTGGGAACTGTTCTGTT
CTTTGGCCAGTCTATTCGCAGAACTAGGCCTTTTCCATGGCAGCATGATT
TGTTTGAAGATAGCTTAAGAGCTGCAGGGATTCAAGGAGTAGAAGTTGGC
ACTAAGTTATATGTTTCCAACTTGGACCATGGAGTGACCAATGAAGACAT
AAGGGTACATACTATGCTGTATCATCATATGATTCTTTCTTAGTCGCTGT
TTCTACCCAATCTGTGTGGAAGTTCTCTTGAAACTTGATTTGCAACTCAG
GAACTTTTCTCTGAGCTTGGAGAGTTGAAGCGTTATGCTGTTCATTATGA
CAAAAATGGACACCCAAGTGTAAGTATTGGGTTTTGTCTTGTAAATTCAG
TTGCCATTATATTTTAGCTTAAAAGTTGGTGATTTGTTTTTCTTGAGAGG
GAGTTGCTTGCAATAACCAAAAGTATAATTACATTTATTCCCCATTTTAC
CTTAAGTTCTAGAAAATAGTATTTTTCTTAGAAGTATTTTGTCTAACTGC
TATCTTTAACTGTGTAACAGGGTTCGGCCGAAGTTGTGTATACTAGAAGA
AGTGATGCATTTGCTGCTCTTAAACGATATAATAATGTGCTTTTGGATGG
AAAGCCCATGAAGATTGAGATTGTTGGTTCCAATGCAGAATTGCCCGTAA
GTGCTCGGGTGAATGTTACTGGGGTGAATGGACGTAGGAAGAGGACTGTT
GTAATGACGTAAGTTGCCTTGGTAGCAGTTTGAACTGTATTTTAGTTTTC
TTTTCTTTTAATGTGGGGATCCTTCAGTTAACTTTTATCATTTTTTATAT
TATTATAAAGATATAAAAAAAATTGGCCTAAGCACAACCTCGATCAAGTA
TTGAAGCATTACTGTATCATGGATGTCTGTCAATGTCCGTGACATTGCGT
TTGTCTTATAACTAGTGCATTTTTATTTCGAATTCTGAAATGGGGTGTCA
ATTCTTCTGCATGATCAAAACATGCAACAACTGACTTTTTTGTGCTTCAG
TGCTATGGCTAGATCGGTTGCAGATTTGGTAGACAACCAGGACGCATCCC
ACTCCCCCTATTTTTGTAGGCAGCATGCCTTATTTCTTCTACTATCTCAT
CATGTCCAATGAAACTGAGCCCCTCATTGACAGGCATCTATAACTACTCA
TTATAGTTTCATCTAGCCTTCAGGGTGAATGGCTTGTGTCCGTTTAAATG
AAGTTCCATGTGGCATTCCAATAACAGTTCCACTCCTCCCAAGACAGACA
CAAACATGTTAATACTGCTGCTCTTCTTCTGTGCTCTATTTTGTGTGGGT
ATTTTCGGCCGTGAAACAGAGCATAAATTCTTTGTATTTATAATATATAA
TACTGAGATCCTATCGTGCTTGCTTGTGATCTGCAGTGCTGCGCATTGTT
TCAGCTGTTGATTACGAAGTACCTCCAACTTGTGGTTCTTGTGTGCTGGG
TTGATCAAACTACCCAAACCCCTTTCCGTTCATTTCCATCGTTTCATCCT
CTTTCTCTCCTCTAGTCTCATTCGTTTTTCTCAATTTTTCTTATTCTTTG
CAACCAAATTGACCTGACTGATATCTGCCAGTTTGATTCTTATCTCAAGA
ACTTCAATTTTTCCTTTGTTATCTGGTTCTTTGTAAAAAATTCGAGTTAC
TCCCATTTCCAGTAGCTATCTTGAGTTAGTTTTTTGGGCTATGAGCTCTT
GTTCTGTTCTCCGTCTTTTTCATGGTTTTGGCACATTTCATATATCCATA
CATTGGTTGGAATGGTTTGACCAGAACATTCACACACGTTCACGAGGATG
TGCTTGGTTTACTATTTTCATGTCAGCCACCAAATTAGAATCTTAGAGCC
TCTGCTGCTGCTGCCACCTCCGTTCTTCGTAAACCAGTGACCTAAAATAT
TGTTCTACCTGTGGATCAACAACCAAGACAAACCAATGGTTTCAAAATCA
GAGCATTGATACCAGTTAATTGAAATGGTTCAATCTCTGAAAAAAATGTT
TAATCTTAATTCAATCCGAAATCTTAATTGCTGTGCCAATCTGGTAGCTG
CTGTGCTAGAGTTGGGGCATAGAAGATAGAAAATGAATGATTTCCTTTCA
TTTTTTATGTTGCTCCAGAACAGAACTCCCTACTCCCGAATTTTCTAACC
TTTTCTCAAATGATAGGATGGTTTTTCTCTCAACCTTCCCTCTACGGTCA
TTTGGCTTACTTCTATTATCTCATTCAACCATATAACGTAACTGGCTAAC
TCCATTGCCAATAATACACTGGACTAACTAGTAATGGATATTTACCAGTT
TTAAGTTTCTGCTAAAATCCCTCGAGTCTTTCTGGAAACAGTATATGCTG
CTTCAATGTTTGCTGATGTTTGTGCTTCTGACTGTGTTGCAGGCCTAGAG
GTGGACCAGCTGGAGGTCGTGCTATTCCTAATCGTGGTGCTGGGTAAGCC
TTTTAATTGTTTTCTTTGGTGTAATCTCTTAACGAATATTGTTTTACTGA
AATTTGTGTATTGGACTTTTTGTCAAAATTCTTTATATATTCCCTAGTGC
AAGATAGCGTAGTAGTATGAATATTTTGGTCTTTTATGTTTTGTCTTATG
TTTAAGGATTTTTGCTGCGTTCTTTATGTTCAGCTATGGTTTGGATAGAG
CCCTTCCTATCTTCGATTTACAAATTCATTTAATGCTTCATACATCTTTT
TCCTCGTTTTCGTTATACTGTGTTTTTTAGGAGATTTCATAAATCATGTT
TTTAATCCTTTGATCAGGAATAAGATTTATTTAAATATTAAGCTGTTGAT
AAGCAATAGTGGAATGAAAATACAATTTTTGCGGGAGGAAAGGAAATTTT
GTAGCGGTTCATTCCGAGACATGATTTGAAATTTTGTTGCTATTGTCCGT
ATGAAAAATCACAAACCATAATTGTTTTTAATGGTACGAAAAATGTAAAG
TAACAGGTACAAAATAAATTATTTTAGTAGTTAAATGATCTAGAATCCAC
CTGGTATATGCATGGTTTGGTTGAATTGGGCAAATTTTTCTACAGTTTCT
GCCCCGTTGAGAACATTTTCATTTGGCATTGGCAGATATAGGTGATAGTT
TCCATTAATAGCATTCCTCTGTTCAGGCTATTATCAGAAGTTAGGAGATG
CTGTTGCATTAATTTGGTGTCCAAACTTACAGTTTAGGCGATGTTGTTTG
ATGTTAAGGTTTGTAGGTTTAGTTTGAACATGGGAACGATGCAATGGTGT
AATCCTTGTGATGTTGAGTAGTAAGCACTAGTATTGGTTATGTTTTGCTT
CCTGTATGCTATTTTGACCTGTAAGATATGGCTACAGTAATTTCATCTAT
TGTTATTGTACAGGCATAAACATGTTTTTGTATTGTTATTCTGTAGTCCT
GGAGTATAAGAAATATATTTTCCTTTCGTTATTTTATACACGACTTATTG
TTCATAATTTAATTTCTTTTCATAGTTGGGGACGTCGTGGTGGCACAAGG
AGTGGCAATGGTAGGGGTCGAGGTGCTGGAGGTCGTGGTCGTGGCAATGG
TCGCGGTGGAGGGCGAGGCCGTGGTAGAAAAGACGGTGTTGAGAAGTCAG
CAGAAGAACTTGACAAAGAACTGGAGACCTATCACGCTGAGGCCATGAAC
ATCTCTTGATGTCGGAATCCTCAGCTTATTTTGTATTAAGATTTGGTTCC
CTGTACAAAAGTTCGTTTCGTTTGGTGTTACTTTAAATCTCTTGCTGCTC
GGTGCTTTTAAACATGCCATCTGATTTCACACCTCATTTAAGTCTTGTTA
GAGAGGCCGCGAATGATCAACCTAGGGATTTTGAAGTTCAGTTATAGATT
TTAGTTTGATTTGCGTATATTTTTATATATTATTGCAGCTGCAAATTTCA
AATGTTTTCACAGTTTGAATGTTTATTTCTTTCTAGTTGCCGATAATAGT
GATAATGCACTTGCGACAATACAGTCCGTATCGTAGAAGTTAGCAGTTAT
GCGCATGTATTTGACCTGAAGAAATCCTAGATCATAATGAATGTCTGGAC
AACTTACAATTTA
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Coding sequence (CDS) from alignment at Vu01:38915686..38921848-

>Vigun01g215400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g215400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g215400.1; organism=Vigna unguiculata; type=CDS; length=891bp; location=Sequence derived from: Vu01:38915686..38921848- (Vigna unguiculata
ATGGCTTCTTCCTTGGATATGTCACTTGATGATAGAATAAAGAACAGAAG
TAACAGAGGAGGTAGAGGTAGAGGAGGACGTGGCAGGGTCCAGTCTGGTC
GTGGGCCTAGCGGTGCTCTTAATGGAGGAAGAATGGCCGGTGCTGTTAAT
AGTAGAAGAATTACTGGTGCCGGTAATGGTGGAAGAACATCTGGTGCTGT
TCGTAGAGGTCCTCTTATGGTTAACACTCGACCATCATCATATGCTATTG
CCAAGTCTATTCGCAGAACTAGGCCTTTTCCATGGCAGCATGATTTGTTT
GAAGATAGCTTAAGAGCTGCAGGGATTCAAGGAGTAGAAGTTGGCACTAA
GTTATATGTTTCCAACTTGGACCATGGAGTGACCAATGAAGACATAAGGG
AACTTTTCTCTGAGCTTGGAGAGTTGAAGCGTTATGCTGTTCATTATGAC
AAAAATGGACACCCAAGTGGTTCGGCCGAAGTTGTGTATACTAGAAGAAG
TGATGCATTTGCTGCTCTTAAACGATATAATAATGTGCTTTTGGATGGAA
AGCCCATGAAGATTGAGATTGTTGGTTCCAATGCAGAATTGCCCGTAAGT
GCTCGGGTGAATGTTACTGGGGTGAATGGACGTAGGAAGAGGACTGTTGT
AATGACGCCTAGAGGTGGACCAGCTGGAGGTCGTGCTATTCCTAATCGTG
GTGCTGGTTGGGGACGTCGTGGTGGCACAAGGAGTGGCAATGGTAGGGGT
CGAGGTGCTGGAGGTCGTGGTCGTGGCAATGGTCGCGGTGGAGGGCGAGG
CCGTGGTAGAAAAGACGGTGTTGAGAAGTCAGCAGAAGAACTTGACAAAG
AACTGGAGACCTATCACGCTGAGGCCATGAACATCTCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR025715FoP_C
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding