Vigun02g192800.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1) HSP 1 Score: 517.309 bits (1331), Expect = 3.038e-178 Identity = 282/553 (50.99%), Postives = 372/553 (67.27%), Query Frame = 1 Query: 1 MLFKFGMRNLLAHRFSPRLTAANASHRFLYGN------PLCTTVESPDLPPWLK--FSDTPIPTDA---ESDDNFVIPSLANWVDTHILTSKPKLPAQPSKQNSLDHVDAVSTLLKQRYSSPELVGEALNRRGFQPSSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLE--GYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGE-FGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMED---GSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEKQRVEKLM 1608 ML K + L+++ R+ RFL N P+ ESP+LP W+K S+ P + + + D++FVIPSLANWV++ S+ ++ + ++ +D V L ++ +S E V + L++ + LV QVL+RFSN W A GFF WA +QTGY HS YN MVD+LGKCR FD MW+LV EM++ E VTLDTM+KVMRRLAK+ ++ A++AF M + +GVK DT A+N LMDALVK S+EHAH+V L+ I + +FNILIHG+C+AR FD+AR M MK F PDV +YT+F+E YC E DFR+V+++LEEMR NGC PN VTYT VM +LGK+ QV++AL VYE+MK DGCV D FYS LI IL + GR KDA ++FEDM QGV RD + YNTMIS A HSR+E ALRLLK MED SC PNVETY LLKMCC KK+MK+L LL HM+KND+S+D++TY L++ GLC SG+VE+A F EE V +GM P +T K L+ ELE K+M+E K +++ L+ Sbjct: 1 MLTKLRISKLVSYTLPRRI----FQRRFLVTNNTAEESPI-VAAESPELPSWIKDFLSNKPSSSSSSVSKDDEDFVIPSLANWVESQKF-SRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLV 547 HSP 2 Score: 79.337 bits (194), Expect = 2.387e-14 Identity = 89/402 (22.14%), Postives = 162/402 (40.30%), Query Frame = 1 Query: 418 DWVSALGFFKWAKAQTGYRHSP-EVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMK--EQGFEPDVFSYTNFIETYCHEKDFRK-VDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEKQRVEKLMD 1611 +WV + F + ++ P E + + D L K T S D+VKE+S+ + VT + +V+RR + A + A + G V S H++N ++ + RNFD + + +M E+ + + + + + K VD LE ++ G + + ++M L K + A EV+ ++ D D ++ LI +A + DAR + + M D VTY + + C +L+EM + C PNV TY ++ + K++ + + M ++ D YS ++ L K+GR +DA E+M +QG+ + +I+ S E R+ K M+ Sbjct: 77 NWVESQKFSRQQVSEGNVVKKPVEDIDKVCDFLNKKDT--SHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQ--------------------AYGFFIWANSQTGYVH---------------SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP211_ARATH (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2) HSP 1 Score: 362.073 bits (928), Expect = 2.623e-118 Identity = 183/414 (44.20%), Postives = 268/414 (64.73%), Query Frame = 1 Query: 376 SSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFE-DMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGS-CKPNVETYHSLLKMCCRKKR-MKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEKQRVEKLM 1608 S LV ++L RF +DW SALG KWA++ G++HS + Y++ VDILGK + +D M + V+ M + VTL+T+AK+MRR A A E E+A+ F R+GEFG++K+T ++N+L+D L K VE A V+L+ KS I ++H+FNI IHGWC+A + A + +MK GF P V SYT I YC + +F KV ++L EM ANG PN++TYTT+M +L + +AL V +MK GC D+ FY+CLI L RAGRL++A VF +MP+ GV + TYN+MI+ C H E+ A+ LLKEME + C P+V TY LL+ C ++ ++V K L + + K+ +SLD +TY+ ++ LC++ E AY EEM+SQ +TP T L+ E++ K+M E +R+E +M Sbjct: 86 SDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRG-DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.545e-63 Identity = 122/400 (30.50%), Postives = 215/400 (53.75%), Query Frame = 1 Query: 352 LNRRGFQPSSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEF-KSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQL 1548 LN + S L+ +VLK+ SN V AL FKWA+ Q G++H+ YN +++ LGK + F +W LV +M + + ++ +T A + RR A+AR+ ++AI AF +M EFG K +++ N ++D L K +V A KV + K R S+ IL+ GW + N + +MK++GFEPDV +Y I +C K + + + EM C P+ + +++ LG +++ ALE +E+ KS G + P Y+ L+ + R++DA ++M +GV +A TY+ ++ R + A + + M SC+P V TY +++M C K+R+ + + D M + + +S +++ LC ++++A + EM+ G+ P + +L Sbjct: 85 LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDM-KAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480 HSP 2 Score: 95.9005 bits (237), Expect = 1.139e-19 Identity = 76/311 (24.44%), Postives = 131/311 (42.12%), Query Frame = 1 Query: 676 GVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEKQRVEKLM 1608 G K T+ N L+++L K + +V + K++ LS +F ++ + RAR A A M+E GF+ + + ++T L K+ V A +V+++MK D Y+ L+ G+ L +V +M +G D V Y +I+ C + E A+R EME +CKP+ + SL+ +K++ + + L+ TY+ +V C S R+EDAY ++EM +G+ PN T ++ L S+E V + M Sbjct: 123 GFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDT-----------------------------------LSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM 398
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 6.687e-62 Identity = 126/458 (27.51%), Postives = 236/458 (51.53%), Query Frame = 1 Query: 265 SKQNSLDHVDAVSTLLKQRYSSPELV-GEALNRRGFQPSSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEKQRVEKLMDRFLQKRNV 1635 S + D D + K SSP+LV AL++ G + S ++V VL RF N + FF+W++ Q Y HS Y++M++ K R + MWDL+ M + + + ++T VMR+ A+A++ ++AI AF M ++ + + A N L+ AL K +V A +V + R S +++IL+ GW + N AR+ +M + G PD+ +Y+ ++ C + ++ M + C P Y+ ++ G ++ +A++ + +M+ G AD ++ LI +A R+K+ V ++M +GV ++ + N ++ ++ A + ++M C+P+ +TY ++KM C KK M+ + +M K + + T+S++++GLC+ + A LEEM+ G+ P+ T +L L + EE++ V K ++ +K NV Sbjct: 61 SSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRK-KKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL----IKEEREDVLKFLN---EKMNV 509
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.347e-61 Identity = 130/429 (30.30%), Postives = 216/429 (50.35%), Query Frame = 1 Query: 286 HVDAVSTLLKQRYSSPELVGEALNRRGFQPSSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLE-GYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKA-GQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGM--TPNPNTLKQLIAEL 1560 V+ + +L+ +S + ALN G L+ +VL R + FF WA Q GY HS EV MV IL K R F ++W L++EM + + + +MRR A A + A+E M ++G++ D L+DAL K GSV+ A KV + + + P + F L++GWCR A++ + MKE G EPD+ +TN + Y H ++ +MR G PN YT ++ L + ++ +A+ V+ +M+ GC AD Y+ LI + G + V +DM K+GV+ VTY ++ + E L L+++M+ C P++ Y+ ++++ C+ +K L + M N +S + T+ +M++G G + +A + +EMVS+G+ P TLK L+ L Sbjct: 66 EVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNL 494 HSP 2 Score: 101.293 bits (251), Expect = 3.132e-21 Identity = 72/290 (24.83%), Postives = 140/290 (48.28%), Query Frame = 1 Query: 769 FKSRIPLSSHSFNI---LIHGWCRARNFDNARKAMGDMKEQG---FEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCR-KKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEE-KQRVEKLMDR 1614 + ++ P HS+ + ++ + R F + +M++ EP++F + + +K +VL+EM G P+ + ++ L K G V +A +V+E M+ + + +++ L++ R G+L +A++V M + G+ D V + ++S + A L+ +M +PNV Y L++ CR +KRM + M + D+ TY+ ++SG CK G ++ YS L++M +G+ P+ T Q++ E K EE + +EK+ R Sbjct: 120 WATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELF--VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.800e-59 Identity = 147/519 (28.32%), Postives = 241/519 (46.44%), Query Frame = 1 Query: 118 SPDLPPWLKFSDTPIPTDAESDDNFVIPSLANWVDTHILTSKPKLPAQPSKQNSL--DHVDAVSTLLKQRYSSPELVGEALNRRGFQPSSDLVSQVLKRFSNDWVSA----------LGFFKWAKAQTGYRH-SPEVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQG-MTPNPNTLKQLIAEL-ESKSMSEEKQRVEKLMDRFLQKR 1629 SP LP S T + +D E+D++ + A V L + P+ K +S+ DH T +P L AL+ Q + VS + R + + L FF WA ++ Y H SP YN M+D+ GK R FD W L+ M ++++T ++RR +A +A+ F RM ++G D A ++++ L + A K R + L+ GWCRA A K +MK G EP+V++Y+ I+ C + V +M +GC PNA+T+ +M KAG+ K L+VY QMK GC DT Y+ LI R L++A V M K+ +A T+NT+ A R+ +M + C+PN TY+ L++M K ++ + M ++ ++ TY L+V+ C G +AY +EMV + +TP+ + + ++A+L + + + ++ VEK++ + L R Sbjct: 18 SPLLPKTFSTSATSLLSDHENDESAATITAAVSVPISPLLT-PEDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVAR 535
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 1.080e-57 Identity = 128/438 (29.22%), Postives = 215/438 (49.09%), Query Frame = 1 Query: 283 DHVDAVSTLLKQRYSSPELVGEALNRRGFQPSSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLE-GYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNF-DNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSD-GCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEK 1587 + V +S L+K S + + L +PS++LV ++L R NDW +A FF WA Q GY S Y+ M+ ILGK R FD+ W L+ EM + V T+ ++R+ + AI F F ++ L+ AL + +V A ++ K + P + SFNI+++GWC A + +M G + DV SY++ I Y KV ++ + M+ P+ Y V+ L KA VS+A + + M+ + G + Y+ LI L +A + ++A+ VF++M ++G+ TY+ + E LL +M C+P VETY L++ CR + + L D M + + DL++Y +M+ GL +G++E+AY + +EM +GM PN N + + K +E++ Sbjct: 95 EDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQR 529
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.443e-57 Identity = 128/427 (29.98%), Postives = 218/427 (51.05%), Query Frame = 1 Query: 289 VDAVSTLLKQRYSSPELVGEALNRRGFQPSSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLE-GYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREET---ALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGM--TPNPNTLKQLI 1551 V+ +L++ +S + ALN G + L+ +VL R + FF WA Q Y HS EVY MV IL K R F ++W L++EM + + + +++R A A + AIE M +FG + D L+DAL K GSV+ A K+ + + R P++ F L++GWCR A+ + M E GFEPD+ YTN + Y + +L +MR G PNA YT ++ L K ++ +A++V+ +M+ C AD Y+ L+ + G++ V +DM K+G++ +TY + AH ++E+ L L+++M P++ Y+ ++++ C+ +K L + M +N +S + T+ +M++GL G + +A +EMV++G+ TLK L+ Sbjct: 83 VEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTY---MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLL 506 HSP 2 Score: 99.3673 bits (246), Expect = 1.189e-20 Identity = 67/276 (24.28%), Postives = 131/276 (47.46%), Query Frame = 1 Query: 775 SRIPLSSHSFNI---LIHGWCRARNFDNARKAMGDMKE---QGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEE 1584 ++ P HS + ++ + R F + +M++ Q EP++F ++ + +K +VL+EM G P+ + ++ L K G V A +++E M+ V + +++ L++ R G++ +A+ V M + G D V Y ++S + A LL++M +PN Y L++ C+ RM+ + M + + D+ TY+ +VSG CK G+++ Y L++M+ +G+ P+ T ++ E K EE Sbjct: 138 AKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELF--VVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEE 410 HSP 3 Score: 76.2554 bits (186), Expect = 3.214e-13 Identity = 68/297 (22.90%), Postives = 124/297 (41.75%), Query Frame = 1 Query: 739 VEHAHKVVLEFKSRIP---LSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKD-FRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEKQRVEKLMDRF 1617 VE +++++ +F SR+P L+ + + + R + GD G+ F + YCH + ++ + ++L +MR G + E K + + + + L+ A +K A +V ++MPK G D + ++ C H + A +L ++M N+ + SLL CR +M K++L M + D+ Y+ ++SG +G++ DAY L +M +G PN N LI L EE +V M+R+ Sbjct: 83 VEKSYRILRKFHSRVPKLELALNESGVEL----RPGLIERVLNRCGDAGNLGYR--FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIE---------------------EMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY 351
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 6.639e-55 Identity = 110/415 (26.51%), Postives = 209/415 (50.36%), Query Frame = 1 Query: 283 DHVDAVSTLLKQRYSSPELVGEALNRRGFQPSSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGM-TP 1524 + V+ V ++ + ++ + L+ S DL+ +VL+RF + A FF WA + G+ H YN M+ IL K R F++M +++EM +G +T++T M+ A A+E + A+ F M ++ K +N L+D+L + + A + + K R + ++ +L++GWCR RN A + DM +QG +PD+ ++ +E + ++ M++ G PN +YT ++ + K + A+E ++ M G D Y+CLI G +L ++ ++M ++G D TYN +I E A R+ +M +P++ T++ ++K + ++ + + + M+K I D +Y++++ GL G+ +A +LEEM+ +GM TP Sbjct: 129 EEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542 HSP 2 Score: 95.1301 bits (235), Expect = 2.649e-19 Identity = 108/480 (22.50%), Postives = 206/480 (42.92%), Query Frame = 1 Query: 322 YSSPELVGEALNRRGFQPSSDLVS-----QVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDT----MAKVMRRLAKAREHEDAIEAFRRMGEF-GVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTV-------------------MINLG----------------KAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEKQR-VEKLMDRFLQ 1623 +SS +L+ +L RGF S VS +V ND + + + + +PE ++ C+ D ++ L + M + + LD + +V+ R AR+ A F E G D+ N +M L K E V+ E ++ L+ +F I + + A+ A MK+ F+ V + +++ K K QVL + TPN +TYT + MI+ G ++ + S A++++ MKS G + Y+ +I + ++ A + F+DM G+ DA Y +I+ + +T LLKEM++ P+ +TY++L+K+ +K + + + M++N+I + T+++++ + E + EEM+ +G+ P+ N+ LI L + S E R +E+++D+ ++ Sbjct: 77 HSSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESST-------NPE------EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARK--PAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540 HSP 3 Score: 60.4622 bits (145), Expect = 2.656e-8 Identity = 66/308 (21.43%), Postives = 124/308 (40.26%), Query Frame = 1 Query: 430 ALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDS---MWDLVKEM---SQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSS-HSFNILIHGWCRA-----------------------------------RNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYN 1227 A+G F+ K + ++ E N ++D LG+ + ++D +KE + + V L+ +V + AR D I+ G+K D A NV+++ L++ A K+ KS+ P + S+ I+I +C+ + D + + +M+E+G PD +Y I+ ++K ++ +M N P+ T+ +M + A V+E+M G D Y+ LI L G+ ++A E+M +G+ + YN Sbjct: 248 AVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ-------GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547 HSP 4 Score: 57.7658 bits (138), Expect = 1.937e-7 Identity = 41/159 (25.79%), Postives = 69/159 (43.40%), Query Frame = 1 Query: 649 EAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLE-FKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYS 1122 E + M E G D N L+ + EHA ++ + ++ I S H+FN+++ + ARN++ R +M ++G PD SYT I E R+ + LEEM G + Y + + GQ E+ ++ K G A ++ Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA 582
BLAST of Vigun02g192800.1 vs. DB:Swiss
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 7.761e-54 Identity = 109/415 (26.27%), Postives = 207/415 (49.88%), Query Frame = 1 Query: 283 DHVDAVSTLLKQRYSSPELVGEALNRRGFQPSSDLVSQVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGM-TP 1524 + V+ V ++ + ++ + L+ S DL+ +VL+RF + A FF WA + G+ H+ YN M+ IL K R F++M +++EM +G +T++T M+ A A+E + A+ F M ++ K +N L+D+L + + A + + K R + ++ +L++GWCR RN A + DM + G +PD+ ++ +E ++ M++ G PN +YT ++ + K + A+E ++ M G D Y+CLI G +L ++ ++M ++G D TYN +I E R+ +M +P++ T++ ++K + ++ + + D M+K I D +Y++++ GL G+ +A +LEEM+ +GM TP Sbjct: 129 EEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542 HSP 2 Score: 91.2781 bits (225), Expect = 5.040e-18 Identity = 107/480 (22.29%), Postives = 206/480 (42.92%), Query Frame = 1 Query: 322 YSSPELVGEALNRRGFQPSSDLVS-----QVLKRFSNDWVSALGFFKWAKAQTGYRHSPEVYNLMVDILGKCRTFDSMWDLVKEMSQLEGYVTLDT----MAKVMRRLAKAREHEDAIEAFRRMGEF-GVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVM------INLGKAGQV-----------------------------SKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVETYHSLLKMCCRKKRMKVLKFLLDHMLKNDISLDLATYSLMVSGLCKSGRVEDAYSFLEEMVSQGMTPNPNTLKQLIAELESKSMSEEKQR-VEKLMDRFLQ 1623 +SS +L+ +L RGF S VS +V ND + + + + +PE ++ C+ D ++ L + M + + LD + +V+ R AR+ A F E G + N +M L K E V+ E ++ L+ +F I + + A+ A MK+ F+ V + +++ K K QVL + TPN +TYT ++ NL +A ++ S A++++ MKS G + Y+ +I + ++ A + F+DM G+ DA Y +I+ + +T LLKEM++ P+ +TY++L+K+ +K + + + M++N+I + T+++++ + E + +EM+ +G+ P+ N+ LI L S+ S E R +E+++D+ ++ Sbjct: 77 HSSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESST-------NPE------EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARK--PAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540 HSP 3 Score: 57.3806 bits (137), Expect = 2.324e-7 Identity = 65/308 (21.10%), Postives = 124/308 (40.26%), Query Frame = 1 Query: 430 ALGFFKWAKAQTGYRHSPEVYNLMVDILGKCR---TFDSMWDLVKEM---SQLEGYVTLDTMAKVMRRLAKAREHEDAIEAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLEFKSRIPLSS-HSFNILIHGWCRA-----------------------------------RNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYSCLIFILGRAGRLKDARDVFEDMPKQGVVRDAVTYN 1227 A+G F+ K + ++ E N ++D LG+ + ++D +KE + + V L+ +V + AR D I+ G+K D A NV+++ L++ A K+ KS+ P + S+ I+I +C+ + D + + +M+E+G PD +Y I+ ++K ++ +M N P+ T+ +M + A V+++M G D Y+ LI L G+ ++A E+M +G+ + YN Sbjct: 248 AVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID-------HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547 HSP 4 Score: 56.225 bits (134), Expect = 5.070e-7 Identity = 40/159 (25.16%), Postives = 68/159 (42.77%), Query Frame = 1 Query: 649 EAFRRMGEFGVKKDTAALNVLMDALVKGGSVEHAHKVVLE-FKSRIPLSSHSFNILIHGWCRARNFDNARKAMGDMKEQGFEPDVFSYTNFIETYCHEKDFRKVDQVLEEMRANGCTPNAVTYTTVMINLGKAGQVSKALEVYEQMKSDGCVADTPFYS 1122 E + M E G D N L+ + EH ++ + ++ I S H+FN+++ + ARN++ R +M ++G PD SYT I E R+ + LEEM G + Y + + GQ E+ ++ K G A ++ Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFA 582 The following BLAST results are available for this feature:
BLAST of Vigun02g192800.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun02g192800.1_Vu_IT97K-499-35_v1.1 ID=Vigun02g192800.1_Vu_IT97K-499-35_v1.1; Name=Vigun02g192800.1; organism=Vigna unguiculata; type=mRNA; length=2134bpback to top protein sequence of Vigun02g192800.1_Vu_IT97K-499-35_v1.1 >Vigun02g192800.1_Vu_IT97K-499-35_v1.1 ID=Vigun02g192800.1_Vu_IT97K-499-35_v1.1; Name=Vigun02g192800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=546bpback to top mRNA from alignment at Vu02:32958816..32960949- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun02g192800.1_Vu_IT97K-499-35_v1.1 ID=Vigun02g192800.1_Vu_IT97K-499-35_v1.1; Name=Vigun02g192800.1; organism=Vigna unguiculata; type=mRNA; length=2134bp; location=Sequence derived from: Vu02:32958816..32960949- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu02:32958816..32960949- >Vigun02g192800.1_Vu_IT97K-499-35_v1.1 ID=Vigun02g192800.1_Vu_IT97K-499-35_v1.1; Name=Vigun02g192800.1; organism=Vigna unguiculata; type=CDS; length=1638bp; location=Sequence derived from: Vu02:32958816..32960949- (Vigna unguiculataback to top |