Vigun02g197900.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 GN=TSB2 PE=2 SV=1) HSP 1 Score: 483.797 bits (1244), Expect = 3.929e-168 Identity = 237/383 (61.88%), Postives = 305/383 (79.63%), Query Frame = 1 Query: 223 GKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKD 1362 G+FGRFGGK+VPET++ L++LE+ F DD FQ EL L+DY GRE+PLY +RL+E+YK R +GTGP IYLKREDLNH G+HK+NNA+AQA++AKR+G + ++ TG+G HG+ATA C + L+C ++M A+D+ERQ NV M+LLGA+V AV G +DA S+A R WV ++E +++ GS GPHP P MVREF VIGKETR QA++KWGGKPDVLVACVG GSNA+GLFHEFV+D+DVRL+G+E G G+++ KH++TL+KG+VGV HG++SYLLQD GQ+I PHSI+AG++YPGVGPE SFLK+ GRAE+ S TD+EALDA+++V RLEGI P+LE +HAL LEKL PTL DG +VVVNCSGRGDKD Sbjct: 52 GRFGRFGGKYVPETLMHALTELESAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYK-RADGTGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKQRIIAETGAGQHGVATATVCRRFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLVGLEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLADGVRVVVNCSGRGDKD 433
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=16922 GN=TSB PE=2 SV=1) HSP 1 Score: 482.641 bits (1241), Expect = 2.611e-167 Identity = 244/383 (63.71%), Postives = 308/383 (80.42%), Query Frame = 1 Query: 223 GKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKD 1362 G+FG+FGGK+VPET++ L++LE+ F+ D FQ EL L+DY GRE+PLY +RL+ +YK R NG GP+IYLKREDLNH G+HK+NNA+AQA++AKR+G K ++ TG+G HG+ATA CA+ L+C ++M A+D+ERQ NV M+LLGA+V AV G +DA S+A R WV ++E+ +++ GS GPHP P MVREF +VIGKETR QALEKWGGKPDVLVACVG GSNA+GLFHEFVDD+DVR+IGVE G GL+SGKH++TL+KGEVGV HGA+SYLLQD GQII PHSI+AG++YPGVGPE SFLK+ GRAE+ TDEEAL+A++++ RLEGI P+LE +HAL LEKL PTL +GTKVV+NCSGRGDKD Sbjct: 75 GRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQKELDGILKDYVGRESPLYFAERLTLHYK-RPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSRLEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKD 456
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB1 PE=2 SV=1) HSP 1 Score: 481.485 bits (1238), Expect = 8.163e-167 Identity = 249/414 (60.14%), Postives = 316/414 (76.33%), Query Frame = 1 Query: 148 PPPTPSMDNNP--FQTPQKKELPISTSGKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKDAAIV 1374 PP + ++P +Q P + G+FG+FGGK+VPET++ LS+LE+ F DD FQ ELA L+DY GRE+PLY +RL+E+Y+ R NG GP IYLKREDLNH G+HK+NNA+AQA++AKR+G K ++ TG+G HG+ATA CA+ LEC ++M A+D+ERQ NV M+LLGA+V V G +DA S+A R WV ++E +++ GS GPHP P MVR+F +VIGKETR QALEKWGGKPDVLVACVG GSNA+GLFHEFV+D +VR+IGVE G GL+SGKH++TL+KG+VGV HGA+SYLLQD GQII PHSI+AG++YPGVGPE SF K+ GRAE+ S TDEEAL+A+++V RLEGI P+LE +HAL LEKL PTL DGT+VV+N SGRGDKD V Sbjct: 59 PPVLMAAGSDPALWQRPD-------SFGRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVGRESPLYFAERLTEHYR-RENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTV 464
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB2 PE=1 SV=2) HSP 1 Score: 480.715 bits (1236), Expect = 2.446e-166 Identity = 242/383 (63.19%), Postives = 305/383 (79.63%), Query Frame = 1 Query: 223 GKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKD 1362 G+FG+FGGK+VPET++ LS+LE F D+ FQ ELAE L+DY GRE+PLY +RL+E+Y+ R NG GP IYLKREDLNH G+HK+NNA+AQA++AKR+G K ++ TG+G HG+ATA CA+ L+C ++M A+D+ERQ NV M+LLGA+V V G +DA S+A R WV ++E +++ GS GPHP P MVR+F +VIGKETR QA+EKWGGKPDVLVACVG GSNA+GLFHEFVDD +VR+IGVE G GL+SGKH++TL+KG+VGV HGA+SYLLQD GQII PHSI+AG++YPGVGPE SFLK+ GRAE+ S TDEEAL+A+++V RLEGI P+LE +HAL LEKL PTL DG +VV+N SGRGDKD Sbjct: 84 GRFGKFGGKYVPETLMHALSELETAFYSLATDEDFQRELAEILKDYVGRESPLYFAERLTEHYR-RENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKD 465
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=1) HSP 1 Score: 475.707 bits (1223), Expect = 1.062e-165 Identity = 238/380 (62.63%), Postives = 301/380 (79.21%), Query Frame = 1 Query: 232 GRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKD 1362 GRFGGK+VPET++ L++LE F DD FQ EL L+DY GRE+PLY +RL+E+YK R +GTGP IYLKREDLNH G+HK+NNA+AQA++AKR+G + ++ TG+G HG+ATA CA+ L+C ++M A+D+ERQ NV MKLLGA+V AV G +DA S+A R WV ++E +++ GS GPHP P MVREF VIGKETR QA+ KWGGKPDVLVACVG GSNA+GLFHEFV+D+DVRLIGVE G G+++ KH++TL+KG+VGV HG++SYLLQD GQ+I PHSI+AG++YPGVGPE SFLK+ GRAE+ S TD+EALDA+++V RLEGI P+LE +HAL LEKL PTL DG +VV+NCSGRGDKD Sbjct: 1 GRFGGKYVPETLMHALTELENAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYK-RADGTGPLIYLKREDLNHRGAHKINNAVAQALLAKRLGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMKLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLIGVEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLPDGVRVVLNCSGRGDKD 379
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB_ANAVT (Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=trpB PE=3 SV=1) HSP 1 Score: 454.907 bits (1169), Expect = 4.250e-157 Identity = 228/417 (54.68%), Postives = 304/417 (72.90%), Query Frame = 1 Query: 166 MDNNPFQ--TPQKKELPISTSGKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKDAAIVFNRRLLDPQ 1401 M P TP ++P G+FGRFGGK+VPET++ L++LE ++K D FQAEL + LRDY GR TPLY +RL+ +Y +R +GTG IYLKREDLNH G+HK+NNAL Q ++AKRMG + ++ TG+G HG+ATA CA+ LEC ++M D+ERQ NV M+L+GA+V V+ G +DA S+A R WV ++E +++ GS GPHP P MVR+F +VIG+ETR QALEKWGG PD+L+ACVG GSNA+GLF+EFV++ +RLIGVE G G+ + KH++TL+KG VGV HGA+SYLLQD+ GQ+I HSI+AG++YPGVGPE S+LK+ GRAE+ S TDE+AL A++++ RLEGI P+LE AHA+ LE L P L ++++NCSGRGDKD V + L PQ Sbjct: 1 MTTTPLSPSTPSNAQVP-DIQGRFGRFGGKYVPETLMPALAELETAYQKYRHDPGFQAELQQLLRDYVGRATPLYFAERLTAHY-ARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVEAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIRLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEQALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIIINCSGRGDKDVQTV--AKFLIPQ 413
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB2_NOSS1 (Tryptophan synthase beta chain 2 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=trpB2 PE=3 SV=1) HSP 1 Score: 452.21 bits (1162), Expect = 3.562e-156 Identity = 228/417 (54.68%), Postives = 303/417 (72.66%), Query Frame = 1 Query: 166 MDNNPFQ--TPQKKELPISTSGKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKDAAIVFNRRLLDPQ 1401 M P TP ++P G+FGRFGGK+VPET++ L++LE +++ D FQAEL + LRDY GR TPLY +RL+ +Y +R +GTG IYLKREDLNH G+HK+NNAL Q ++AKRMG + ++ TG+G HG+ATA CA+ LEC ++M D+ERQ NV M+L+GA+V V G +DA S+A R WV ++E +++ GS GPHP P MVR+F +VIG+ETR QALEKWGG PD+L+ACVG GSNA+GLF+EFV++ ++LIGVE G G+ + KH++TL+KG VGV HGA+SYLLQD+ GQ+I HSI+AG++YPGVGPE S+LK+ GRAE+ S TDEEAL A++++ RLEGI P+LE AHA+ LE L P L ++V+NCSGRGDKD V + L PQ Sbjct: 1 MTTTPLSPSTPSNVQVP-DIQGRFGRFGGKYVPETLMPALAELETAYQQYRNDPGFQAELQQLLRDYVGRATPLYFAERLTAHY-ARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVAAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIKLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEEALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIVINCSGRGDKDVQTV--AKFLIPQ 413
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB_TRIEI (Tryptophan synthase beta chain OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=trpB PE=3 SV=1) HSP 1 Score: 442.195 bits (1136), Expect = 3.537e-152 Identity = 222/403 (55.09%), Postives = 293/403 (72.70%), Query Frame = 1 Query: 175 NPFQTPQKKELPISTSGKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKDAAIV 1374 NP T Q L G+FG+FGGK+VPET++ L QLE KK D F+ EL + LRDY GR +PLY +RL+ +Y ++ +GTGP IYLKREDLNH G+HK+NNAL QA++A+RMG + ++ TG+G HG+ATA CA+ L+C ++M D+ERQ NV M+L+GA+V V+ G +DA S+A R WV ++E +++ GS GPHP P MVR+F +VIG ETR Q LEKW G PD+L+ACVG GSNA+GLFHEF++D VR+IGVE G G+++ KH++TL+ G VGV HGA+SYLLQD+ GQII PHSI+AG++YPGVGPE SFLK+SGR E+ S TD EA+ A++++ +LEGI P+LE AHA+ LE L P L ++V NCSGRGDKD V Sbjct: 7 NPTSTQQPDSL-----GRFGKFGGKYVPETLMPALLQLETACKKYSQDPTFKQELQQLLRDYVGRPSPLYFAERLTAHY-TKPDGTGPQIYLKREDLNHTGAHKINNALGQALLAQRMGKQRIIAETGAGQHGVATATVCARFGLKCVIYMGIHDMERQALNVFRMRLMGAEVRPVEAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGVETRAQCLEKWNGLPDILMACVGGGSNAMGLFHEFINDPSVRMIGVEAAGKGVDTNKHAATLTLGRVGVLHGAMSYLLQDEEGQIIEPHSISAGLDYPGVGPEHSFLKDSGRVEYYSVTDNEAVAAFQRLSQLEGIIPALETAHAIAYLETLCPQLSGSPRIVFNCSGRGDKDVQTV 403
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB1_NOSS1 (Tryptophan synthase beta chain 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=trpB1 PE=3 SV=1) HSP 1 Score: 437.187 bits (1123), Expect = 3.327e-150 Identity = 214/387 (55.30%), Postives = 290/387 (74.94%), Query Frame = 1 Query: 223 GKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKDAAIV 1374 G+FG+FGGK+VPET++ L +LE ++K D ++Q EL LRDY GR +PLY +RL+EYY +R +GTG IYLKREDLNH G+HK+NNALAQ ++AKR+G + V+ TG+G HG+ATA CA+ L+C ++M D+ERQ NV MKL+GA+V V+ G +DA S+A R WV ++E +++ GS GPHP P +VR+F ++IGKETR Q EKWGG PD+L+ACVG GSNA+GLFHEF+D+ +RLIGVE G G+++ KH++TL+ G VGV HGA+SYLLQD+ GQ+I HSI+AG++YPGVGPE S+LK+ RAE+ S TD++ALD ++++ RLEGI P+LE +HA+ LE L P L ++V+NCSGRGDKD V Sbjct: 18 GRFGKFGGKYVPETLMPALGELETAYQKYRDDASYQTELQNLLRDYVGRPSPLYFAERLTEYY-ARPDGTGAQIYLKREDLNHTGAHKINNALAQVLLAKRIGKQRVIAETGAGQHGVATATVCARFGLDCVIYMGIHDMERQALNVFRMKLMGAEVRPVEAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMIVRDFHAIIGKETRVQCQEKWGGLPDILLACVGGGSNAIGLFHEFIDEPSIRLIGVEAAGEGVDTDKHAATLTLGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDIRRAEYYSVTDKQALDGFQQLSRLEGIIPALETSHAIAYLETLCPQLNGSPRIVINCSGRGDKDVQTV 403
BLAST of Vigun02g197900.1 vs. DB:Swiss
Match: TRPB_SYNY3 (Tryptophan synthase beta chain OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=trpB PE=3 SV=1) HSP 1 Score: 434.106 bits (1115), Expect = 4.823e-149 Identity = 214/387 (55.30%), Postives = 290/387 (74.94%), Query Frame = 1 Query: 223 GKFGRFGGKFVPETIIACLSQLEAEFKKAMADDAFQAELAEALRDYAGRETPLYHTKRLSEYYKSRNNGTGPDIYLKREDLNHGGSHKMNNALAQAMIAKRMGCKSVVTATGSGHHGXXXXXXXXXXXXECTVFMAAKDIERQYSNVRLMKLLGAQVEAVDGG---FRDAASDAFRCWVGDLENKYHLTGSAVGPHPCPSMVREFQSVIGKETRTQALEKWGGKPDVLVACVGTGSNALGLFHEFVDDEDVRLIXXXXXXXXXXXXKHSSTLSKGEVGVYHGAISYLLQDQHGQIIHPHSIAAGMEYPGVGPELSFLKESGRAEFCSATDEEALDAYEKVCRLEGIFPSLEAAHALGILEKLAPTLCDGTKVVVNCSGRGDKDAAIV 1374 G+FG +GGK+VPET++ L++LE + + A+ +FQ ELA L+DY GR +PLY +RLS +Y +R +GT P IYLKREDLNH G+HK+NNAL Q ++AKRMG K ++ TG+G HG+ATA CA+ LEC ++M +D+ERQ NV M LLGA+V+ V G +DA S+A R WV ++E +++ GS GPHP P MVR+F VIG+ETR QAL+KWGG PD+L+ACVG GSNA+GLF++F+D+ VRLIG+E G + SGKH++TL+ G+ GV HGA+SYLLQD+ GQ+ HSI+AG++YPGVGPE S+LK++GRAE+ S TD+EA+ A +++ +LEGI P+LE AHA LE L P L +G ++V+NCSGRGDKD V Sbjct: 19 GRFGNYGGKYVPETLMPALTELEEAYYRYRAESSFQEELAGLLKDYVGRSSPLYFAERLSAHY-ARPDGTYPLIYLKREDLNHTGAHKINNALGQVLLAKRMGKKRIIAETGAGQHGVATATVCARFGLECIIYMGVQDMERQKLNVFRMNLLGARVQPVTAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHRVIGQETRQQALKKWGGLPDILLACVGGGSNAMGLFYDFIDEPAVRLIGIEAAGESIVSGKHAATLTMGKPGVLHGAMSYLLQDKEGQVTEAHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDQEAITALQRLSQLEGIIPALETAHAFAYLETLCPQLKNGERIVINCSGRGDKDVQTV 404 The following BLAST results are available for this feature:
BLAST of Vigun02g197900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun02g197900.1_Vu_IT97K-499-35_v1.1 ID=Vigun02g197900.1_Vu_IT97K-499-35_v1.1; Name=Vigun02g197900.1; organism=Vigna unguiculata; type=mRNA; length=1813bpback to top protein sequence of Vigun02g197900.1_Vu_IT97K-499-35_v1.1 >Vigun02g197900.1_Vu_IT97K-499-35_v1.1 ID=Vigun02g197900.1_Vu_IT97K-499-35_v1.1; Name=Vigun02g197900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=468bpback to top mRNA from alignment at Vu02:33302579..33304778- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun02g197900.1_Vu_IT97K-499-35_v1.1 ID=Vigun02g197900.1_Vu_IT97K-499-35_v1.1; Name=Vigun02g197900.1; organism=Vigna unguiculata; type=mRNA; length=2200bp; location=Sequence derived from: Vu02:33302579..33304778- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu02:33302579..33304778- >Vigun02g197900.1_Vu_IT97K-499-35_v1.1 ID=Vigun02g197900.1_Vu_IT97K-499-35_v1.1; Name=Vigun02g197900.1; organism=Vigna unguiculata; type=CDS; length=1404bp; location=Sequence derived from: Vu02:33302579..33304778- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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