Vigun05g132500.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana OX=3702 GN=XTH2 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 2.236e-97 Identity = 145/284 (51.06%), Postives = 190/284 (66.90%), Query Frame = 1 Query: 40 LLLCVAVAIVYATKTGDVSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGN-NGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWREMHVTGSIWNGEPWASNG--KRIDWNQAPFTAHFQGFKIHACET--QNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDRGQL---HKECQIN 867 +L + A A G + F NY V WG H+ L G+EVQLS+D +SG+GF SK Y SGFFQMRIK+P +DS GVVTAFYLTS+ G+ HDE+DFEFLGN G+P +QTN+F+N +GGREQ+ WFDPT +FH+YGILWN +QIVFYVD++PIRVFKN K GV++P + M + S+WNGE WA++G ++I+W APF A +QGF H C Q+ N +C S WWN + QL+ +QK + V K++ YDYCSDR + EC+ N Sbjct: 13 VLFLMFTANARARGRGAIDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSK-----GDTHDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSDRPRYPVPPSECRWN 291
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana OX=3702 GN=XTH1 PE=3 SV=3) HSP 1 Score: 277.33 bits (708), Expect = 7.716e-92 Identity = 137/265 (51.70%), Postives = 180/265 (67.92%), Query Frame = 1 Query: 91 VSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGNNGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWREMHVTGSIWNGEPWASNG--KRIDWNQAPFTAHFQGFKIHACETQNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDRGQLH---KECQINS 870 V F NY V WG +V L G+EVQLS+D +SG+GF SK Y SGFFQ+RIK+P KD+ GVVTAFYLTS+ G HDE+DFEFLGN +QTN+F N +G REQ+ +LWFDP+ +FH+Y ILWN +QIV YVD IP+RVFKN + G+++P + M V S+WNGE WA++G +I+W+ APF A+FQGF C T N K C S WWN + +L+ +QKAY V +K++ YDYCSD+ + H EC+ N+ Sbjct: 37 VGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSK-----GNTHDEVDFEFLGNKEGKLAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFT-NAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSECKWNN 295
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana OX=3702 GN=XTH3 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 5.410e-88 Identity = 133/264 (50.38%), Postives = 182/264 (68.94%), Query Frame = 1 Query: 91 VSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGNN-GEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWREMHVTGSIWNGEPWASNGKR--IDWNQAPFTAHFQGFKIHAC--ETQNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDRGQLH---KEC 858 V+F QNY V WG HV L G EV L +D++SG GF SK Y SG F+MRIK+P+ ++ G+VTAFYLTS+ G HDEIDFEFLGNN G+P LQTN+F N EG RE+R LWF+PT ++H+YG+LWN +QIVFYVD IPIRV+KN++ GVS+P + M V S+WNG+ WA++G R ++W+ +PF AHF+ F + C + ++ N C S WWN + +L+ +QK Y++V K++ YDYC+DR + +EC Sbjct: 33 VTFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSK-----GGGHDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNEN--GVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum OX=4565 GN=XTH PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 4.151e-78 Identity = 119/268 (44.40%), Postives = 169/268 (63.06%), Query Frame = 1 Query: 79 KTGDVSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGN-NGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWRE-MHVTGSIWNGEPWASNGKR--IDWNQAPFTAHFQGFKIHACETQNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDRGQ---LHKECQ 861 K DV F +NY W H+ ++ GREVQLS+DKT+G GF+++ Y G F M IK+ DS G VTAFYL+S+ +HDEIDFEFLGN G+P++LQTN+F+ +G REQR LWFDPT ++HSY +LWN + I F+VD+ PIRVFKN +GV +P+ + M + S+WN + WA+ G R DW++APF A ++GF + CE KF WW+ + L+ Q + +V K+H +Y+YC+D + + EC+ Sbjct: 26 KPVDVPFDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQ-----NSEHDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPECK 288
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana OX=3702 GN=XTH5 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.631e-77 Identity = 121/271 (44.65%), Postives = 170/271 (62.73%), Query Frame = 1 Query: 37 FLLLCVAVAIVYATKTGDVSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGN-NGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWRE-MHVTGSIWNGEPWASNG--KRIDWNQAPFTAHFQGFKIHACETQNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDR 837 FL+L V K+ +V F +NY W H+ +L G EV L +DK +G GF+SK Y G F M IK+ DS G VTAFYL+S+ +HDEIDFEFLGN G+P++LQTN+F G REQR +LWFDP+ ++HSY +LWN +QIVF+VD++PIRVFKN VGV FP+ + M + S+WN + WA+ G ++ +W +APF A ++GF + CE KF WW+ + L+ Q K ++V K++ +Y+YC+DR Sbjct: 12 FLILATVAFGVPPKKSINVPFGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQ-----NSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDR 277
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis OX=3914 GN=XTHA PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 7.804e-77 Identity = 126/283 (44.52%), Postives = 171/283 (60.42%), Query Frame = 1 Query: 37 FLLLCVAVAIVYATKTG--DVSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGN-NGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWRE-MHVTGSIWNGEPWASNG--KRIDWNQAPFTAHFQGFKIHACETQNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDR---GQLHKEC 858 +LL +A A A DV F +NY W H+ +L G E+QL +DK +G GF+SK Y G F M IK+ DS G VTAFYL+S +HDEIDFEFLGN G+P++LQTN+F +G REQR LWFDPT +H Y +LWN +QIVFYVD+ PIRVFKN + +GV FP+ + M + S+WN + WA+ G ++ DW++APF A ++GF I CE KF WW+ + L+ Q + +V K+ +Y+YC+DR Q+ EC Sbjct: 9 LILLSLASASFAANPRTPIDVPFGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSS-----TNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis OX=3914 GN=XTHB PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.242e-75 Identity = 122/291 (41.92%), Postives = 176/291 (60.48%), Query Frame = 1 Query: 37 FLLLCVAVAIVYAT-------KTGDVSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGN-NGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWRE-MHVTGSIWNGEPWASNG--KRIDWNQAPFTAHFQGFKIHACETQNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDRG---QLHKECQIN 867 L+LC+ + + ++ + DV F +NY W H+ + G E+QL +DK +G GF++K Y G F M IK+ DS G VTAF L+S+ +HDEIDFEFLGN G+P++LQTN+F +G REQR LWFDPT +H Y +LWN +QIVF VD IPIRVFKN ++GV FP+ + M V S+WN + WA+ G ++ DW++APF A ++GF + CE ++F WW+ + L+ Q + ++V +K +Y+YC+DR QL EC+ N Sbjct: 5 LLILCLVLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQ-----NAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPECRRN 290
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum OX=4097 GN=XTH PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.911e-75 Identity = 121/272 (44.49%), Postives = 173/272 (63.60%), Query Frame = 1 Query: 70 YATKTGDVSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGN-NGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWRE-MHVTGSIWNGEPWASNG--KRIDWNQAPFTAHFQGFKIHACETQNTNKF-LCYSPYLWWNDHKHWQ-LNPLQQKAYQYVTKKHLVYDYCSDRGQ---LHKEC 858 Y K DV F +NY+ W + H+ +L G V L +D++SGAGF+SK Y G F M++K+ DS GVVTAFYL+S +HDEIDFEFLGN G+P++LQTN+F +G REQR LWFDPT +HSY +LWN QIV +VD++PIR FKN +GV FP+ + M + S+W+ + WA+ G ++ DW+ APFTA + F + CE + +C + + W D K +Q L+ LQ + ++V +K+ +Y+YC+DR + L EC Sbjct: 23 YPRKPVDVPFWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSN-----NAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis OX=3715 GN=XET16A PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.418e-75 Identity = 121/283 (42.76%), Postives = 170/283 (60.07%), Query Frame = 1 Query: 34 FFLLLCVAVAIVYATKTGDVSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGN-NGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWRE-MHVTGSIWNGEPWASNG--KRIDWNQAPFTAHFQGFKIHACETQNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDRGQ---LHKECQ 861 FL+ V + K DV F +NY W H L G E+QL +DK +G GF+SK Y G F M IK+P D+ GVVTAFYL+S +HDEIDFEFLGN G+P +LQTN+F +G REQR LWFDP+ +H+Y +LWN +QIVF+VD IPIRVFKN +GV FP+ + M + S+WN + WA+ G ++ +W APF A ++GF I C+ K+ +WW+ ++ L+ Q + ++V K +Y+YC+DR + + EC+ Sbjct: 13 LFLMASSTVMAIPPRKAIDVPFGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-----TNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAECR 290
BLAST of Vigun05g132500.1 vs. DB:Swiss
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana OX=3702 GN=XTH4 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 8.891e-74 Identity = 119/283 (42.05%), Postives = 167/283 (59.01%), Query Frame = 1 Query: 34 FFLLLCVAVAIVYATKTGDVSFQQNYKVVWGNRHVFFLQHGREVQLSIDKTSGAGFRSKLDYASGFFQMRIKIPTKDSRGVVTAFYLTSRVYKDMGEKHDEIDFEFLGN-NGEPHMLQTNIFANDEGGREQRHSLWFDPTINFHSYGILWNQHQIVFYVDEIPIRVFKNKSKVGVSFPWRE-MHVTGSIWNGEPWASNG--KRIDWNQAPFTAHFQGFKIHACETQNTNKFLCYSPYLWWNDHKHWQLNPLQQKAYQYVTKKHLVYDYCSDRGQ---LHKECQ 861 F ++ V + K DV F +NY W H G E+QL +DK +G GF+SK Y G F M IK+P D+ GVVTAFYL+S +HDEIDFEFLGN G+P +LQTN+F +G REQR LWFDP+ +H+Y ILWN +QIVF+VD IPIR FKN +GV FP+ + M + S+WN + WA+ G ++ +W APF A ++GF I C+ K+ +WW+ + L+ Q + ++V K +Y+YC+DR + + EC+ Sbjct: 14 FLMVSSTMVMAIPPRKAIDVPFGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-----TNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQASVEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAECK 291 The following BLAST results are available for this feature:
BLAST of Vigun05g132500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g132500.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g132500.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g132500.1; organism=Vigna unguiculata; type=mRNA; length=1080bpback to top protein sequence of Vigun05g132500.1_Vu_IT97K-499-35_v1.1 >Vigun05g132500.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g132500.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g132500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=291bpback to top mRNA from alignment at Vu05:15530364..15532283+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun05g132500.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g132500.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g132500.1; organism=Vigna unguiculata; type=mRNA; length=1920bp; location=Sequence derived from: Vu05:15530364..15532283+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu05:15530364..15532283+ >Vigun05g132500.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g132500.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g132500.1; organism=Vigna unguiculata; type=CDS; length=873bp; location=Sequence derived from: Vu05:15530364..15532283+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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