Vigun05g204000.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: AT18F_ARATH (Autophagy-related protein 18f OS=Arabidopsis thaliana OX=3702 GN=ATG18F PE=2 SV=1) HSP 1 Score: 471.855 bits (1213), Expect = 2.499e-153 Identity = 336/762 (44.09%), Postives = 451/762 (59.19%), Query Frame = 1
Query: 82 SSFRALSSYLRIXXXXXXXXXXXXXXXXXXXXXXXXXXPDHDQVIWAGFDELEGEGGVIQQVLLLGYRSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKRSEDNYANSRQLLVVCTDGFFVGGSNVQDGLATPNNGSILNSHEQMNGNYLPTTVRFYSMKSQSYVHVLKFXXXXXXXXXXXXXXAISQSTQIHCFEATTLIRAYILLTNPIVMSVPGSGGIGYGPLAVGPRWLAYSGSPVAVSNSGHVSGQHLMPSANFPSNGSLLAHYAKESSKHIATGIVSLGDMGYKKLSRYCSDNNGSFQTVNSGSKGTGTINGHSTDADNIGMVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNILSYDDSFTTKNSGLGTTVNHSQGWSHSSAMQKPKQKSLVVAGPPITLSVVSRIRNG-ANGWRGSVXXXXXXXXXRKTY-LSGAIASSFRKY-KSSEGNY--------SKYHMLVFSPTGSMIQYALRM-------LTSQDSGFASGLVPAYESLQQDDARLVVEPIQKWNICQSHSRRERED-NIDIYGENGIADA-NKIYPEEVAEEHTISP-KLSNGDIKVNPSLEEKNHLYISEAELQMHQ--AQTSLWGKPEIYFHSMLQEPNLMGEEAASKG--EFEIERIPTCVIEARSKDLVPIFDYFQTPKLQQ 2292
SSFRALS+ L+++SSGASTVARSA S +S+V HDQV+WAGFD L+ E G ++VLLL ++SGFQVW V+++ NV +VS HDG FMQM+ NPI S +D + SR LL VC G +++ N GS PT V YS+KSQSYVH LKFR+ +YSVRC SR+VA+ Q+ QI CF+A TL Y ++TN IV GS G+GYGPLAVGPRW+AYSGS +A S+S + + + S + PS +A +A++SSK +A+GI +LGD GY+ L++YCS+ + G KG G N DA++IGMVIVKDI +++VI QF+AHKSPISAL FD SG +LVTASIQGHNINVF+IMP A T ++ HL++LQRGFTNAVIQDI FS DS I++ SSRGTSHLF INP+ P+ +S +SRIR+G ++GW G+V+GAA+AA G + G + S+F + S NY SK ++LVF+P+G M QYALR T+ +GF S ES + + +L V+PI++W++ Q+ SRRE D + DIYG D+ +K++PE V ++ K+S K + +K HLYI EAE Q Q LW + + F ++ GEE + G E EIE I T IEAR++DLVP++ Y Q+P+ QQ
Sbjct: 23 SSFRALSNCLKVISSGASTVARSAVSAASSAVESH-----HDQVLWAGFDNLQKEDGDTRRVLLLAFKSGFQVWDVEDTENVHVIVSAHDGQAFFMQMLLNPINSGVLDDRFYKSRPLLAVC-------GDYSSKKISSDNPGS--------ETVATPTNVYVYSLKSQSYVHTLKFRATIYSVRCCSRIVAVLQAAQIDCFDAATLEMDYRIVTNSIVC---GSLGVGYGPLAVGPRWIAYSGSRIATSSSAIFTSEIVSLSTSSPS----VAQFARDSSKQLASGIANLGDKGYRSLTKYCSEVLPN--PYIPGLKGIGVGNEKVADAESIGMVIVKDITNKSVITQFKAHKSPISALCFDQSGLLLVTASIQGHNINVFRIMPTISTSRAVKT-TTFAHLFRLQRGFTNAVIQDICFSKDSNLIVVGSSRGTSHLFEINPEKE--------------------------------------------GDAPVPMSAISRIRSGNSSGWIGTVSGAASAAAGMVAGSVPGTVTSTFCYCDEKSNNNYYGSVADMCSKTNLLVFAPSGCMTQYALREHQVGVGHETAAMTGFDS------ESGLETEGKLAVDPIRRWSMIQNQSRRETHDPHSDIYGGGTSVDSKSKVFPEVVRKQSVEEAWKVSK---KGTTRVVDKRHLYIYEAEQQQTHLPTQLPLWARRKFRFQELVLN---RGEEISGGGGREMEIEGIQTRTIEARTRDLVPVWGYLQSPRSQQ 698
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: AT18G_ARATH (Autophagy-related protein 18g OS=Arabidopsis thaliana OX=3702 GN=ATG18G PE=2 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 8.429e-128 Identity = 293/817 (35.86%), Postives = 446/817 (54.59%), Query Frame = 1
Query: 52 GGGKTNGFIPSSFRALSSYLR-IXXXXXXXXXXXXXXXXXXXXXXXXXXPDHDQVIWAGFDELEGEGGVIQQVLLLGYRSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKRSEDNYANSRQLLVVC----TDGFFVGGSNVQDGLATPNNGSILNSHEQMNGNYLPTTVRFYSMKSQSYVHVLKFXXXXXXXXXXXXXXAISQSTQIHCFEATTLIRAYILLTNPIVMSV---PGSGGIGYGPLAVGPRWLAYSGSPVAVSNSGHVSGQHLMPSANFPSNGS-----LLAHYAKESSKHIATGIVSLGDMGYKKLSRYCSDNNGSFQTVNSGSKGTGTINGHS-TDADNIGMVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTG----PSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNILSYDDSFTTKNSGLGTTVNHSQGWSHSSAMQKPKQKSLVVAGPP--ITLSVVSRIRNGANGWRGSVXXXXXXXXXRKTYLSGAIASSFRKYKSSEGNYSKY-----HMLVFSPTGSMIQYALRMLTSQDSGFASGL---VPAYESLQQDDARLVVEPIQKWNICQSHSRREREDNIDIYGENGIADANKIYPEEVAEEHTISPKLSNGDIKVNPSLE-------------EKNHLYISEAELQMHQAQTSLWGKPEIYFHSMLQEPNLMGEEAASKGEFEIERIPTCVIEARSKDLVPIFDYFQTPKLQQARTSMDSKNDDQLLHNSLQASG--NGRIS 2373
G GK +G +P+SF+ +SS L+ + ++ + + ++ + + D DQV WAGF LE V + VLLLGY++GFQV+ V++++N +LVS+ GPVSF+QM P P S E + NS LL+V T+G +G S Q+G + S + + +N PTTVRFYS++S SYV+VL+FRS V +RCSSRVVA+ + QI+C +A TL + +LT P+ V +GYGP+AVGPRWLAY+ +G +S Q S + + S +A YA ESSK +A G+++LGDMGYK LS+YC D T + + G S +DA+N GMV VKD++S +++QF+AH SPISAL FDPSGT+LVTAS+ G+NINVF+IMP + + + D S+VHL+KL RG T+A++QDI FS S+W+ I SS+GT H+F +N G + T+ S W + + + PP + LSVVSRI+ + GW +V+ A AATG+ SGA+A+ F K + + + H+LV++P+G ++Q+ L +S +GL ++ +Q+DD R+ VEPIQ W++C+ E E+ + I + K Y E H S + + + +N E++H Y+S E+++ +W +I FH M P + +++ GEFEIE++P +E + K L+P+FD+F + K +++ + + H S S NG+I
Sbjct: 5 GKGKNSGLLPNSFKIISSCLKTVSANATNVASSVRSAGASVAASISAAEDDKDQVTWAGFGILELGQHVTRHVLLLGYQNGFQVFDVEDASNFNELVSKRGGPVSFLQMQPLPARSGDHE-GFWNSHPLLLVVAGDETNGTGLGHSFSQNGSLARDGSSDSKAGDAIN---YPTTVRFYSLRSHSYVYVLRFRSSVCMIRCSSRVVAVGLANQIYCVDALTLENKFSVLTYPVPQPVRQGTTRVNVGYGPMAVGPRWLAYASKSSMTMKTGRLSPQTFTSSPSLSPSSSSGGSSFMARYAMESSKQLANGLINLGDMGYKTLSKYCQDMLPDGSTSPASPNAIWKVGGVSGSDAENAGMVAVKDLVSGALVSQFKAHTSPISALCFDPSGTLLVTASVCGNNINVFQIMPSRSHNAPGDLSYEWESSHVHLFKLHRGITSAIVQDICFSQQSQWVAIISSKGTCHIFVLNSSGSDAAFQPCEGEEPTRLPA------SSLPWWFTQS----LSSNQQSLSPPTAVALSVVSRIKYSSFGWLNTVSNATTAATGKVFVPSGAVAAVFHKSVTHDLQLNSRTNALEHILVYTPSGHVVQHELLPSVCTESP-ENGLRVQKTSHVQVQEDDLRVKVEPIQWWDVCRRSDWLETEERL----PKSITE--KQYDLETVSNHLTSHEDACLSLDMNSHFSEDKYLKSCSEKPPERSHCYLSNFEVKVTSGMLPVWQNSKISFHVM-DSPR---DSSSTGGEFEIEKVPAHELEIKQKKLLPVFDHFHSTK-----ATLEDRFSMKCYHTSATGSHQVNGKIC 791
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: AT18H_ARATH (Autophagy-related protein 18h OS=Arabidopsis thaliana OX=3702 GN=ATG18H PE=2 SV=1) HSP 1 Score: 407.912 bits (1047), Expect = 6.052e-127 Identity = 291/768 (37.89%), Postives = 436/768 (56.77%), Query Frame = 1
Query: 64 TNGFIPSSFRALSSYLRIXXXXXXXXXXXXXXXXXXXXXXXXXXPDHDQVIWAGFDELEGEGGVIQQVLLLGYRSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKRSEDNYANSRQLLVVCTDGFFVGGSNVQDGLATPNNGSILNSHEQMNGNYLPTTVRFYSMKSQSYVHVLKFXXXXXXXXXXXXXXAISQSTQIHCFEATTLIRAYILLTNPIV-MSVPGSGGI--GYGPLAVGPRWLAYSGSPVAVSNSGHVSGQHLMPS----ANFPSNGSLLAHYAKESSKHIATGIVSLGDMGYKKLSRYCSD--NNGSFQTVNSGS-KGTGTINGHSTDADNIGMVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDN----LSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNILSYDDSFTTKNSGLGTTVNHSQGWSHSSAMQKPKQKSLVVAGPP---ITLSVVSRIRNGANGWRGSVXXXXXXXXXRKTYLSGAIASSFRKYKSSEGNYSKY---HMLVFSPTGSMIQYAL-------RMLTSQDSGFASGLVPAYESLQQDDARLVVEPIQKWNICQSHSRREREDNIDIYGENGIADANKIYPEEVAEEHTISPKLSNGDIKVNPSLEEKNHLYISEAELQMHQAQTSLWGKPEIYFHSMLQEPNLMGEEAASK---GEFEIERIPTCVIEARSKDLVPIFDYFQT 2277
TNGF+P+S + +S+ +R SSG + + S A+ ++S + DQV+W+ FD L + VLLLGY +GFQV +D+SN+V + VSR D PV+F+QM P P A + + +S +L+ D G + T +GS+ N +E PT VRFYS++S +YVHVL+FRS VY VRCS R+VA+ +QI+CF+A TL + +L+ P+ + G G+ GYGP+AVG RWLAY+ + S+ G +S Q++ P + P+NG+L+A YA ESSKH+A G+++LGD GYK +S+YC D ++G +++S + G + HS ++D +G VIVKD SR +IAQFRAH SPISAL FDPSGT+LVTASI G+NINVF+IMP + D S+V LYKL RG T+AVIQDI FS S+WI I SS+ T H++ ++P GG N+L +S L T++ WS S M + + PP +TLSVVSRI+ + AA++ G+ T+ SG +A+ F + E S ++LV++P+G ++QY L + ++ +G SGL +++ R+ VEP+Q W++C+ ERE+NI G +A +E+ T EK+H+Y++ AE+ ++ + +W EI F+ M P+ G+ S GE EI ++ ++ R KDL+P++D F +
Sbjct: 24 TNGFLPNSLKFISTCIRTASSGVRSASASVAASLSSDSHEL-----KDQVLWSSFDRLHTSESSFKNVLLLGYTNGFQVLDIDDSNDVTEFVSRRDDPVTFLQMQPLP-AKCDGVEGFRSSHPILLAVADEAKGSGP-----IVTSRDGSVRNGYEDPLA-LSPTVVRFYSLRSHNYVHVLRFRSTVYMVRCSPRIVAVGLGSQIYCFDALTLENKFSVLSYPVPQLGNQGISGVNVGYGPMAVGARWLAYASNSPLSSSIGRLSPQNVTPPGVSPSTSPNNGNLVARYAMESSKHLAAGLLNLGDKGYKTISKYCQDLKHDGPGPSLSSSPGRKVGRVGSHSAESDVVGTVIVKDFESRAIIAQFRAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPTPTKNGPGAQSYDWSSSHVPLYKLHRGMTSAVIQDICFSSYSQWIAIVSSKSTCHIYVLSPFGGE-NVLEIRNS-QFDGPTLAPTLSLPW-WSSPSFM------TTHFSYPPPASVTLSVVSRIKC------NNFFHAASSVVGKPTFPSGCLAAVFHQSVPQESQSSSPALDYLLVYTPSGHVVQYKLIPSLGGDQAESNTRNGATSGLT------SEEELRVKVEPVQCWDVCRRADWPEREENICGLTYGGRKNAELTVDTSDSEDQT--------------KPLEKHHVYLANAEVLINSGRKPIWQNSEISFYPMY-PPDSDGKNLNSHQGGGETEIGKVSANEVDIRRKDLLPVYDNFHS 743
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: BCAS3_HUMAN (Breast carcinoma-amplified sequence 3 OS=Homo sapiens OX=9606 GN=BCAS3 PE=1 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 5.974e-34 Identity = 111/412 (26.94%), Postives = 194/412 (47.09%), Query Frame = 1
Query: 226 FDELEGEGGVIQQVLLLGYRSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKRSEDNYANSRQLLVVCTDGFFVGGSNVQDGLATPNNGSILNSHEQMNGNYLPTTVRFYSMKSQSYVHVLKFXXXXXXXXXXXXXXAISQSTQIHCFEATTLIRAYILLTNPIVMSVPGSGGIGYGPLAVGPRWLAYSGSPVAVSNS--GHVSGQHLMPSANFPSNGSLLAHYAKESSKHIATGIVSLGDMGYKKLSRYCSDNNGSFQTVNSGSKGTGTINGHST--DADNIG---MVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNILSY 1440
F E+ G ++++GY G QVW + S ++L S GP+ +++P P + DN+A R LL VC +G S G + P V YS+++ V ++F++ +Y + C+ R++ + +I F++ T + + V S G P+A+G RWLAY+ + + + G G N S + + AK + +G+ +G + + S ++S S+ + + G T D + +G +++ +D S ++A F AH+ P+ ++F+ SG +LVT GH+ +VF+I+ S + + HLY L RG T A +QDI FS D +W+++S+ RGTSH+F INP GG + ++
Sbjct: 79 FHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRHGPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKS---IGSS----GTSPPY-----------------CCVDLYSLRTGEMVKSIQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFF------VTSCYPCPGPNMNPIALGSRWLAYAENKLIRCHQSRGGACGD------NIQSYTATVISAAKT----LKSGLTMVGKVVTQLTGTLPSGVTEDDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQIL----THPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQPCVRTH 446
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: BCAS3_MOUSE (Breast carcinoma-amplified sequence 3 homolog OS=Mus musculus OX=10090 GN=Bcas3 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 8.620e-34 Identity = 110/412 (26.70%), Postives = 195/412 (47.33%), Query Frame = 1
Query: 226 FDELEGEGGVIQQVLLLGYRSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKRSEDNYANSRQLLVVCTDGFFVGGSNVQDGLATPNNGSILNSHEQMNGNYLPTTVRFYSMKSQSYVHVLKFXXXXXXXXXXXXXXAISQSTQIHCFEATTLIRAYILLTNPIVMSVPGSGGIGYGPLAVGPRWLAYSGSPVAVSNS--GHVSGQHLMPSANFPSNGSLLAHYAKESSKHIATGIVSLGDMGYKKLSRYCSDNNGSFQTVNSGSKGTGTINGHST--DADNIG---MVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNILSY 1440
F EL G ++++GY G QVW + S ++L S GPV +++P P + DN+A R LL VC +G S G P V YS+++ V ++F++ +Y + C+ R++ + +I F++ T + + V S G P+A+G RWLAY+ + + + G G ++ ++L+ ++K + +G+ +G + + S ++ S+ + + G T D + +G +++ +D S ++A F AH+ P+ ++F+ SG +LVT GH+ +VF+I+ S + + HLY L RG T A +QDI FS D +W+++S+ RGTSH+F INP GG + ++
Sbjct: 79 FHELHSTGNEPPLLVMIGYSDGMQVWGIPISGEAQELFSVRHGPVRAARILPAPQLGAQKCDNFAEKRPLLGVCKS---IGSS----GTTPPY-----------------CCVDLYSLRTGEMVKSIQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFF------VTSCYPCPGPNMNPIALGSRWLAYAENKLIRCHQSRGGACGDNIQSY-----TATVLS-----AAKTLKSGLTMVGKVVTQLTGTLPSGVTEDDVALHCNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQIL----THPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQPCVRTH 446
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: BCAS3_DROME (Breast carcinoma-amplified sequence 3 homolog OS=Drosophila melanogaster OX=7227 GN=rudhira PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.714e-22 Identity = 97/324 (29.94%), Postives = 152/324 (46.91%), Query Frame = 1
Query: 556 TTVRFYSMKSQSYVHVLKFXXXXXXXXXXXXXXAISQSTQIHCFEATTLI-RAYILLTNPIVMSVPGSGGIGYGPLAVGPRWLAYSGSPVAVS--NSGHVSGQHLMPSANFPSNGSLLAHYAKESSKHIATGIVSLGDMGYKKLSRYCSDNNGSFQTVNSGSKGTGTINGHSTDADNIGMVIVKDI--------------LSRN---------VIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTGPSYV---HLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNILSY 1440
+ V F S+K+ V +KF++ V ++ + V I+ +I F+A TL R I P S GI P+A+GPRWLAY+ + S + G G+ PS + + + AK SK G+ G+ L+ + + S ++ + S G DA G+V + D+ LS ++A F AH + A+ FD SG +L+TA +GH+ +VF++ P GPS HLY L RG T+A +Q I+FS DS+W +S+ RGT+H+F I P GG + + ++
Sbjct: 229 SAVNFMSLKTGVQVKTIKFKNAVLDIQANRSAVVITFHERIAVFDARTLEDRLTITTCYP-------SPGINPNPIALGPRWLAYAEHKLLHSKRSGGGCDGE------GVPSYTATVLNAAKSLSK----GLREFGEQVAAGLTGTTAGSGASSKSSSFDSASGGP------DAKQSGVVTIIDVKHPVKDYSPTSGTPLSSTAGSQGGGDPIVAHFVAHSEALVAMEFDSSGMLLLTADRRGHDFHVFRVQP-------HPVGPSLAAVHHLYVLHRGDTSAKVQHIAFSLDSRWAAVSTLRGTTHVFPITPYGGAMGVRTH 522
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: ATG18_DICDI (Autophagy-related protein 18 OS=Dictyostelium discoideum OX=44689 GN=atg18 PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.040e-9 Identity = 39/113 (34.51%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 1069 ADNIGMVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAIN 1407
+ N G ++V D+L+ + +AHKS ISAL+ GT+L TAS +G I VF + +LS +RG A+I ++FS D +++ +SS GT H+F I+
Sbjct: 154 SQNNGNILVMDVLTLETVNLIQAHKSQISALALSQDGTLLATASDKGTVIRVFALPYANKSLS-------------FRRGSIPAIIHSMTFSLDGRYLCVSSDTGTIHIFKID 253
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: ATG18_USTMA (Autophagy-related protein 18 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=ATG18 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 3.598e-9 Identity = 43/133 (32.33%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 1021 NSGSKGTGTINGHSTDADNIGMVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGG 1419
NSG+ + N + D V++ D+LS +V +AHK+PISAL+ + +GT+L TAS +G I VF I P+ L++ +RG A I ++F+ S + +SS T H+F ++ G
Sbjct: 172 NSGASSSAEANTTAGD------VLIFDLLSLSVTNVIQAHKTPISALALNATGTLLATASDKGTVIRVFSI-------------PAAQKLHQFRRGSYAARIYSLNFNAVSTLLAVSSDTETVHIFKLSSGAG 285
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: ATG18_SCHPO (Autophagy-related protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atg18 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 5.219e-9 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 1081 GMVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAI 1404
G VI+ D+++ I + AHK ++ L+F+ GT+L TAS G I VF I PS LY+ +RG A I I+F DS + ++SS T H+F +
Sbjct: 168 GQVILWDVINCKQITKIEAHKDSLACLAFNSDGTMLATASDNGRIIRVFAI-------------PSGQRLYQFRRGSLPAQIYSIAFHPDSSLLTVTSSTQTVHIFRL 262
BLAST of Vigun05g204000.1 vs. DB:Swiss
Match: AT18E_ARATH (Autophagy-related protein 18e OS=Arabidopsis thaliana OX=3702 GN=ATG18E PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.042e-7 Identity = 41/121 (33.88%), Postives = 61/121 (50.41%), Query Frame = 1
Query: 1081 GMVIVKDILSRNVIAQFRAHKSPISALSFDPSGTILVTASIQGHNINVFKIMPVQDNLSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNILSYD 1443
G V V D L NVI +AH S I+ ++ G++L TAS +G I +F V L L + +RG A I +++ S + KW+ SS +GT H+F + P +ILS+D
Sbjct: 185 GQVQVHD-LRWNVIKFIKAHDSAIACMTLTLDGSLLATASTKGTLIRIFN--AVDGTL-----------LQEFRRGVERAEIYNVAISSNLKWVAASSEKGTLHVFRLRP-----DILSFD 286 The following BLAST results are available for this feature:
BLAST of Vigun05g204000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g204000.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g204000.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g204000.1; organism=Vigna unguiculata; type=mRNA; length=3816bpback to top protein sequence of Vigun05g204000.1_Vu_IT97K-499-35_v1.1 >Vigun05g204000.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g204000.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g204000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=869bpback to top mRNA from alignment at Vu05:39223796..39230118- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun05g204000.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g204000.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g204000.1; organism=Vigna unguiculata; type=mRNA; length=6323bp; location=Sequence derived from: Vu05:39223796..39230118- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu05:39223796..39230118- >Vigun05g204000.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g204000.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g204000.1; organism=Vigna unguiculata; type=CDS; length=2607bp; location=Sequence derived from: Vu05:39223796..39230118- (Vigna unguiculataback to top |