Vigun05g206900.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 2.031e-152 Identity = 202/217 (93.09%), Postives = 213/217 (98.16%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINVKDDSSVLKKIGCCS 651 M GY+ DDEYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATK+LN+D+KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVL+QIYRIVSKRAVEAGD+GSSS +PSKGQTINVK+DSSVLK+ GCCS Sbjct: 1 MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 1.121e-144 Identity = 196/218 (89.91%), Postives = 204/218 (93.58%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINVKDDSSVLKKIGCCSN 654 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNID KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFE A RWLKELRDHTDPNIVVMLIGNKSDLRHLV V TEDGK+FAE+ESLYFMETSALEATNVENAF+EVL+QIYRIVSKRAVEAGD S+S VPS+GQTINV +DSSVL + CCSN Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 1.400e-139 Identity = 186/218 (85.32%), Postives = 201/218 (92.20%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINVKDDSSVLKKIGCCSN 654 MAGY+ADDEYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATKSLNID+KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR T+EN RWLKELRDHTDPNIVVMLIGNKSDLRHLVAV T++ K AERE LYFMETSALEATNVENAFTE L+QIYRIVSK+AVEAGD G++S+ P KG+TIN+KD+ S KK GCCS+ Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 2.211e-135 Identity = 180/218 (82.57%), Postives = 203/218 (93.12%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINVKDDSSVLKKIGCCSN 654 MAGY+AD+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATK+ ++ KV+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR ATFENAARWL+ELR HTDPNIVVMLIGNK DLRHLVAV TE+ K+FAERESLYFMETSAL+ATNVENAFTEVL+QI++IVSKR+V+ G G S+ +P KG+TINVK+D SVLK++GCCSN Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2) HSP 1 Score: 377.481 bits (968), Expect = 1.088e-133 Identity = 179/216 (82.87%), Postives = 199/216 (92.13%), Query Frame = 1 Query: 4 AGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINVKDDSSVLKKIGCCS 651 AGY+A+D+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SL +D KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFEN RWLKELRDHTDPNIVVML+GNKSDLRHLVAV T++GK+FAERESLYFMETSALE+TNVENAF EVL+QIYRIVSKR+VEAGD+ S P KG+ IN+KDD S +KK GCCS Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSG--PGKGEKINIKDDVSAVKKGGCCS 216
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1) HSP 1 Score: 374.015 bits (959), Expect = 2.212e-132 Identity = 178/218 (81.65%), Postives = 203/218 (93.12%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINVKDDSSVLKKIGCCSN 654 MAGY+ +D+YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++L +D KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFEN RWLKEL++HTDPNIVVML+GNKSDLRHL+AVPTEDGKS+AE+ESL FMETSALEATNVE+AF EVL+QIYRI SK+ VEAG++G++S VP KG+ I VK+D S LKK+GCCSN Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNAS-VP-KGEKIEVKNDVSALKKLGCCSN 216
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RAA1D_ARATH (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=2 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 9.566e-132 Identity = 179/218 (82.11%), Postives = 200/218 (91.74%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINVKDDSSVLKKIGCCSN 654 MAGY+ADD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SLN++ KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFEN RWL+ELRDHTDPNIVVML+GNKSDLRHLVAV TED KSFAE ESLYFMETSALE+TNVENAF+EVL+QIY +VSK+A+EAG++ S VPSKG+ I+V D S +KK GCCSN Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 4.000e-131 Identity = 178/218 (81.65%), Postives = 196/218 (89.91%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINVKDDSSVLKKIGCCSN 654 MAGY+ADDEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+SLN+D KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFEN WLKELR+HTDPNIVVML+GNKSDLRHLVAV TED KSFAE+ESLYFMETSALEATNVENAF EVL+QI+ IVSK+A+EA S+ VPSKG I++ D S +KK GCCSN Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAA--SESANVPSKGDKIDIGKDVSAVKKGGCCSN 216
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RAA1F_ARATH (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1) HSP 1 Score: 358.992 bits (920), Expect = 1.799e-126 Identity = 171/220 (77.73%), Postives = 198/220 (90.00%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINV--KDDSSVLKKIGCCSN 654 MA Y+ADDEYDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+++D K++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD NIV+M +GNK+DLRHL AV TED K+FAERE+ +FMETSALE+ NVENAFTEVLSQIYR+VS++A++ GD+ ++ +P KGQTINV KDD S +KK+GCCSN Sbjct: 1 MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAA--LP-KGQTINVGSKDDVSAVKKVGCCSN 217
BLAST of Vigun05g206900.1 vs. DB:Swiss
Match: RAA1G_ARATH (Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 3.914e-124 Identity = 168/220 (76.36%), Postives = 198/220 (90.00%), Query Frame = 1 Query: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGDNGSSSTVPSKGQTINV--KDDSSVLKKIGCCSN 654 MA Y+ADD+YD+L+K+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+++D K++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHT+ NIV+ML+GNK+DLRHL AV TED K+FAERE+ +FMETSALEA NVENAFTEVLSQIYR+ SK+A++ GD+ +T+P KGQ+INV KDD S +KK+GCCS+ Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDD--HTTLP-KGQSINVGSKDDVSEVKKVGCCSS 217 The following BLAST results are available for this feature:
BLAST of Vigun05g206900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g206900.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g206900.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g206900.1; organism=Vigna unguiculata; type=mRNA; length=1423bpback to top protein sequence of Vigun05g206900.1_Vu_IT97K-499-35_v1.1 >Vigun05g206900.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g206900.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g206900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=219bpback to top mRNA from alignment at Vu05:39626401..39631511+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun05g206900.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g206900.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g206900.1; organism=Vigna unguiculata; type=mRNA; length=5111bp; location=Sequence derived from: Vu05:39626401..39631511+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu05:39626401..39631511+ >Vigun05g206900.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g206900.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g206900.1; organism=Vigna unguiculata; type=CDS; length=657bp; location=Sequence derived from: Vu05:39626401..39631511+ (Vigna unguiculataback to top |