Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun05g233800.1 | Vigun05g233800.1_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
| Vigun05g233800.1_Vu_IT97K-499-35_v1.1 | Vigun05g233800.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun05g233800.1.v1.1.five_prime_UTR.1 | Vigun05g233800.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
| Vigun05g233800.1.v1.1.five_prime_UTR.2 | Vigun05g233800.1.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun05g233800.1.v1.1.CDS.1 | Vigun05g233800.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun05g233800.1.v1.1.three_prime_UTR.1 | Vigun05g233800.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..43 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 12..43 |
Sequences
The
following sequences are available for this feature:
mRNA sequence
>Vigun05g233800.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g233800.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g233800.1; organism=Vigna unguiculata; type=mRNA; length=761bp
ATTTCTCACAGTACACTGCACCCCACTTTCTGCGCAGAGTAAATTAGACA
TTTATAAGGGCAATAAATATTGTGGGCAATAAGTTCTGGTTTATCTTCAT
GCATTGAACACCTCAAAAGCTCTACATATAGTGTCACCTTCTAATGCTTC
ACTCAACACAAACCAGATTGGTACAATATTATGCTGCCGTTTCTCTGCCT
CATGATACGGTTGTGATGCATCCATCCGCCTCATAATTCTGATTTAGAGG
AGAGTTAGTGTTTGAGAAGATGCGCAAAAGAAAGAGTCGAGGGTCGGAAT
TGAAGGTGGCGAACAGGCCAACATCGCCGGTGTTTTCTTCGTCATCATCA
GGTGAATGGCCGGAGTTTTCTTCCTCGTCGTCTTGTTCTTCGGTATCATA
CTCACCAAAGTTTGCGACCGAGGAAGAAGAGAAAGTGCATGGTGAAAATG
GTGAAGAAACAAAGGCCATGGATCTGGTTGGTTGTCCTCGGTGCTTCATG
TTCGTGATGCTATCAGAGGAGGATCCAAAGTGCCCTAAGTGCAAGAGCAC
AGTTTTTCTTGAGTTTTTCAAACATGAAAGCATCAAGACAGACAACTGAG
TCGTGATGAGGACAATTTTTAGGAATTAAATAAAACCCTCATATGCTTCA
GGATCTTTCCATGTTTATTTGTTTTGCCTATGTTGTTTAGTTGTAAATCT
GAGTTTTATCTTCTTACCTGAAGACTAAATAAAGTTTATATCATGCTCTA
CTTTTCATCTT
back to topprotein sequence of Vigun05g233800.1_Vu_IT97K-499-35_v1.1
>Vigun05g233800.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g233800.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g233800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=110bp
MRKRKSRGSELKVANRPTSPVFSSSSSGEWPEFSSSSSCSSVSYSPKFAT
EEEEKVHGENGEETKAMDLVGCPRCFMFVMLSEEDPKCPKCKSTVFLEFF
KHESIKTDN*
back to topmRNA from alignment at Vu05:42737902..42739289+
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun05g233800.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g233800.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g233800.1; organism=Vigna unguiculata; type=mRNA; length=1388bp; location=Sequence derived from: Vu05:42737902..42739289+ (Vigna unguiculata
ATTTCTCACAGTACACTGCACCCCACTTTCTGCGCAGAGTAAATTAGACA
TTTATAAGGGCAATAAATATTGTGGGCAATAAGTTCTGGTTTATCTTCAT
GCATTGAACACCTCAAAAGCTCTACATATAGTGTCACCTTCTAATGCTTC
ACTCAACACAAACCAGATTGGTACAATATTATGCTGCCGTTTCTCTGCCT
CATGATACGGTTGTGATGCATCCATCCGCCTCATAATTCTGGTTCTTCCC
GCCACCAACTGCTTCTATTCTTTTCTTACTTATTCTCATATTTACTTCTA
CACCTTTTGCATACATGCCAATCTTTTTCATCGTTTTCTGCAATGTACTC
ATTTCTCAAATCGATAAAGCTCACACTAAACACACAAAAAACCCTTGTTG
GTTTTACCCAGAACAGATTTTTACAGTTTGCTTTTACCAGCTTAATTCCC
TCTTTTCAAATCTTAAGGAACATGACATCTCTTTGTGACTTTGTATGTTA
ATTCTAGGTTTTAAACGTCTTTCTGGGACCGCAGTTTTGACTGTAACAGT
TTCTTGTTTTACCGAACCTGCAACTGCAATTGCAATTATGACCGTATTCA
CCGTGTTTTGTCTTCAAAAACGTAACAAAAAAATAAACTTTGAACACAAT
TTAGAACCTTTCTGGAGTTATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATGAAAGGACTTG
CTAATTGCTGTCTACCTTTCTCGTTTTTGCTCTTTATAATTAGTCCGTTT
AGTGCGTAATTGAGTTCACTTAGGTTGTGAAAATGATGTTTTCTTTATTT
CTTCTTGAAAATGAACAGATTTAGAGGAGAGTTAGTGTTTGAGAAGATGC
GCAAAAGAAAGAGTCGAGGGTCGGAATTGAAGGTGGCGAACAGGCCAACA
TCGCCGGTGTTTTCTTCGTCATCATCAGGTGAATGGCCGGAGTTTTCTTC
CTCGTCGTCTTGTTCTTCGGTATCATACTCACCAAAGTTTGCGACCGAGG
AAGAAGAGAAAGTGCATGGTGAAAATGGTGAAGAAACAAAGGCCATGGAT
CTGGTTGGTTGTCCTCGGTGCTTCATGTTCGTGATGCTATCAGAGGAGGA
TCCAAAGTGCCCTAAGTGCAAGAGCACAGTTTTTCTTGAGTTTTTCAAAC
ATGAAAGCATCAAGACAGACAACTGAGTCGTGATGAGGACAATTTTTAGG
AATTAAATAAAACCCTCATATGCTTCAGGATCTTTCCATGTTTATTTGTT
TTGCCTATGTTGTTTAGTTGTAAATCTGAGTTTTATCTTCTTACCTGAAG
ACTAAATAAAGTTTATATCATGCTCTACTTTTCATCTT
back to topCoding sequence (CDS) from alignment at Vu05:42737902..42739289+
>Vigun05g233800.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g233800.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g233800.1; organism=Vigna unguiculata; type=CDS; length=330bp; location=Sequence derived from: Vu05:42737902..42739289+ (Vigna unguiculata
ATGCGCAAAAGAAAGAGTCGAGGGTCGGAATTGAAGGTGGCGAACAGGCC
AACATCGCCGGTGTTTTCTTCGTCATCATCAGGTGAATGGCCGGAGTTTT
CTTCCTCGTCGTCTTGTTCTTCGGTATCATACTCACCAAAGTTTGCGACC
GAGGAAGAAGAGAAAGTGCATGGTGAAAATGGTGAAGAAACAAAGGCCAT
GGATCTGGTTGGTTGTCCTCGGTGCTTCATGTTCGTGATGCTATCAGAGG
AGGATCCAAAGTGCCCTAAGTGCAAGAGCACAGTTTTTCTTGAGTTTTTC
AAACATGAAAGCATCAAGACAGACAACTGA
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