Transcript Overview
| Name | Vigun05g240200.1 |
|---|
| Unique Name | Vigun05g240200.1_Vu_IT97K-499-35_v1.1 |
|---|
| Type | mRNA |
|---|
| Organism | Vigna unguiculata (cowpea) |
|---|
| Sequence length | 3106 |
|---|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun05g240200.1 | Vigun05g240200.1_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
| Vigun05g240200.1_Vu_IT97K-499-35_v1.1 | Vigun05g240200.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun05g240200.1.v1.1.five_prime_UTR.1 | Vigun05g240200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun05g240200.1.v1.1.CDS.1 | Vigun05g240200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.2 | Vigun05g240200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.3 | Vigun05g240200.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.4 | Vigun05g240200.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.5 | Vigun05g240200.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.6 | Vigun05g240200.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.7 | Vigun05g240200.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.8 | Vigun05g240200.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.9 | Vigun05g240200.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.10 | Vigun05g240200.1.v1.1.CDS.10_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun05g240200.1.v1.1.CDS.11 | Vigun05g240200.1.v1.1.CDS.11_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun05g240200.1.v1.1.three_prime_UTR.1 | Vigun05g240200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
Homology
BLAST of Vigun05g240200.1 vs. DB:Swiss
Match: TI100_ARATH (Protein TIC 100 OS=Arabidopsis thaliana OX=3702 GN=TIC100 PE=1 SV=1) HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0 Identity = 359/521 (68.91%), Postives = 426/521 (81.77%), Query Frame = 1 Query: 199 NPETNFQDFSRALESPAVKELHEELDPLIAXXXXXXXXXXXXXXWTEQDLRELWADGDPEIGGTGWDPALATEEEYNYVNEQLAEGEDPPIAPFYLPFRKHYPPIPDNHYDIATPKDTIEELDRIEEFLRWVSYVFQDGSTYEGTVWDDYAHGKGVYVSDDRLIRYEGEWFQNDVEGHGVLELDIPVIEPTPGSKLEAKMRAQGRIIARDFMSPEDREWLEKDVEDMYDLADGEYEIPYYENEEWIKEFGSKPEKGRYRYAGQWKHGRMHGCGVFEVNERVLHGRFYFGEYVNKYEGCDEEISGMHXXXXXXXXXXXRMFINKPDGMVREERGPYTDPQHPYFYEEDDVWMAPGFINQFYEVPDYWKVYVKEVDEEREMWLNSFYRAPLRLPMPAELEHWWSKEENSEL-PEFVLINKXXXXXXXXXSKLIYTEDPLILHTPTGHIINYVEDEHYGIRLFWQPPLKEGEDVDPEKAVFLPLGYDEFFGVDTDKKKESILLRIVLAIENVCKPWLDKLDKWT 1758
NPETN + F+R L+ VK + EE + E+ FDFP DPE W EQDLRE+WADG E+ GWDPA A E++++ VN+++ EG DP I PFY+P+RK YP IPDNHYDI K +EELDRIEEFL+WVSY+F DGS+YEGTVWDD A GKGVY++++ L+RYEGEW QND+EGHGV+++DIP IEP PGSKLEAKMRA+GRII RD+M+PEDR+WLE DVED L DG +++P+YENEEW+ +FG KPEKGRYRYAGQWKH RMHGCGV+EVNER+L+GRFYFGE + + GC +I +H+ +AEVAAAKARMF+NKPDGM+REERGPY DPQHPYFYEEDDVWMAPGFINQFYEVP+YW+ YV EVD+EREMWLNSFY+APLRLPMPAELEHWW EN E+ PEFVL+NKEPEPDP DPSKL+ EDP+ILHTPTG IINYVEDE +GIRLFWQPPL+EGE+VDP K FLPLG+DEF+G + KKE + VL IE KP LD L+KWT
Sbjct: 78 NPETNIRRFNRVLDGKRVKRMQEEEEDKYTFYEDLFDFPRDPERWKEQDLREIWADGPLEMTKPGWDPAWADEDDWDVVNDEIQEGRDPGIQPFYVPYRKPYPAIPDNHYDIENAKGVVEELDRIEEFLQWVSYIFPDGSSYEGTVWDDLAQGKGVYIAENGLVRYEGEWLQNDMEGHGVIDVDIPDIEPIPGSKLEAKMRAEGRIIKRDYMTPEDRKWLEMDVEDSVALTDGNFQVPFYENEEWVTQFGEKPEKGRYRYAGQWKHSRMHGCGVYEVNERILYGRFYFGELLEEEHGCTVDICALHSGLAEVAAAKARMFVNKPDGMIREERGPYGDPQHPYFYEEDDVWMAPGFINQFYEVPEYWETYVGEVDQEREMWLNSFYKAPLRLPMPAELEHWW---ENVEVTPEFVLLNKEPEPDPNDPSKLVQKEDPVILHTPTGRIINYVEDEKHGIRLFWQPPLEEGEEVDPSKVEFLPLGFDEFYGKEVVVKKEHPIKSFVLGIEKSVKPMLDGLEKWT 595
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 582..646 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 677..701 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..77 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 702..727 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 632..727 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 40..70 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 12..26 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 637..651 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 652..676 |
| None | No IPR available | SUPERFAMILY | 82185 | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | coord: 202..360 |
| IPR003409 | MORN motif | SMART | SM00698 | morn | coord: 206..227
e-value: 9.6
score: 6.7
coord: 324..345
e-value: 0.13
score: 20.6
coord: 230..251
e-value: 22.0
score: 4.0 |
| IPR003409 | MORN motif | PFAM | PF02493 | MORN | coord: 326..341
e-value: 0.0014
score: 18.4
coord: 208..227
e-value: 0.11
score: 12.5
coord: 232..247
e-value: 0.93
score: 9.5 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g240200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g240200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g240200.1; organism=Vigna unguiculata; type=mRNA; length=3106bp
AGTTTATAGAATTGACTTCTAAAATGAGATGAAATAGTGAAACGACAGAG
AAAGGTGTCGTATGACAAGAACCCTCTTTCTCTTTTGTTTGCCTCTATCG
TCGTTTGTAACGATAGGTAGCTGCTGGTAGGATTCATGTAATGAATGTAA
CTGTGTTATCTCCTTCACTCACTCACTAACTCACCTTATCCTTTTCGCAT
TACTCTCTAACCGTTCCGTGTTCCCAAATGGCCAACGACGAAGACCAACG
GCAAGACTCTCCTTCGACCAATGAGCCCCAAAATGCCGCCTCctcagact
ccgaatccgaatccgaatacgactccgactactcctacgacGAGGCGGAG
GATGACGCCTTCCGCCGTGCCTTCCAGTTCCGCGAAGACGAGGACGACGA
GGTGCCGGTGGAAGACAAGCGCAACAACCCGGAGACCAACTTTCAAGACT
TCAGCCGAGCGCTGGAGAGCCCGGCGGTGAAGGAGCTGCATGAGGAGCTG
GACCCCTTGATTGCGGAGGAGGAAAACCCTTTCGACTTCCCCGAGGACCC
CGAGAACTGGACCGAGCAGGACCTTCGCGAGCTTTGGGCGGATGGGGACC
CCGAAATTGGCGGCACAGGGTGGGACCCTGCTTTGGCCACCGAGGAAGAG
TACAACTACGTTAACGAACAGCTTGCGGAGGGAGAAGACCCTCCCATTGC
GCCATTCTATCTTCCTTTCCGCAAACATTACCCTCCAATTCCCGATAACC
ACTACGACATTGCCACTCCCAAGGATACTATCGAAGAGTTGGATAGGATT
GAAGAGTTCCTCAGATGGGTTAGCTACGTTTTCCAAGATGGTAGCACCTA
TGAAGGGACCGTTTGGGATGACTATGCTCATGGGAAAGGAGTTTATGTTT
CGGACGATAGATTGATCAGGTATGAAGGTGAATGGTTTCAAAATGATGTA
GAGGGTCATGGTGTTCTTGAACTTGATATACCTGTCATAGAGCCTACTCC
TGGGTCCAAGCTTGAAGCAAAGATGCGAGCTCAAGGAAGGATTATAGCTA
GGGATTTTATGTCCCCAGAAGACAGAGAATGGCTTGAGAAGGATGTTGAA
GATATGTATGATCTTGCAGATGGGGAGTATGAAATCCCCTATTATGAGAA
TGAGGAATGGATAAAGGAATTTGGAAGCAAGCCGGAGAAAGGTCGATATC
GTTATGCTGGTCAGTGGAAGCATGGCAGGATGCATGGATGTGGTGTATTT
GAAGTCAATGAGCGTGTCCTACATGGTAGATTTTATTTTGGAGAATATGT
GAACAAGTATGAGGGATGTGATGAAGAAATTTCAGGGATGCATGCTGCTA
TAGCAGAAGTTGCTGCTGCAAAGGCTCGCATGTTTATTAACAAACCAGAT
GGAATGGTTAGAGAAGAGAGAGGTCCTTATACTGATCCACAGCATCCTTA
CTTTTATGAAGAAGACGATGTGTGGATGGCACCTGGCTTCATTAATCAGT
TTTATGAAGTCCCGGATTACTGGAAAGTATATGTGAAAGAAGTAGACGAA
GAAAGAGAAATGTGGTTGAACTCTTTCTATAGAGCTCCTCTGAGGTTACC
CATGCCAGCTGAACTTGAGCACTGGTGGTCAAAAGAGGAGAATAGCGAGC
TTCCTGAATTTGTCCTTATTAATAAGGAACCAGAGCCTGATCCTGAAGAT
CCTTCAAAGCTTATATATACTGAGGATCCTTTGATCCTCCATACACCAAC
TGGACATATTATCAATTATGTTGAGGATGAGCATTACGGGATACGTTTAT
TTTGGCAGCCACCTTTGAAAGAGGGTGAGGATGTAGATCCTGAAAAGGCT
GTATTCCTGCCCCTTGGTTATGATGAGTTTTTTGGAGTAGACACGGATAA
AAAAAAGGAGAGCATATTGTTGCGTATTGTACTTGCAATTGAAAATGTCT
GCAAGCCGTGGCTTGATAAGCTGGATAAATGGACTGAAGAGCAGAAAAAA
ATTAAGGAAGAGGAAAAGAAAGAACTTGAGGAAGATCTTGAACTGCTGGA
AGCTGAAATTGGACTGGAAGAGGCTGTTGAGGAAATGGAAAGGTTATTGC
GCATAAGAGAGAAAGAAGAGGAAAAGAAGGCAGAGATGGGTTTGCTGgat
gatgatgaagaagatggtgatgatgatatgGCTTCTGTACCCAAACAAGA
GAAAGAAGCTCCTGCAAAGGTGGAAGAGGAAGCTCCTGCAAAGGTAGAAG
AGGAAGCTCCTGCAGAGGTGGAAGAGGAAgatgatgatgatgatgatgat
gatggagatgatgaAGACGAGGATAATAGTGCACAATCAAGTTTCGGGTC
TGTTGAGCAGGGACAGACAACAGAGCAGCCTAAGGCAAAACCTGGGAAAT
CTCCATTTTCTACATTGTCACTTGCATTTGCTCGTAGCAGCCTTATCTCC
ACTGTTCCATCCAAGCTGCAACAATCATTTTCATTCTGGGACATGGGAAG
ATCGAAACTAGAGTCAGGTCCTCTTCCGAGCATTGATCGCTCCAGTAATA
TGAAAACAGTTTGTTCAGTCAGTTTCCGTCCTGTGACCAGCCAGAAGGGT
AGCTTGAAGACTGTGGGGAAAACTCATGGGAAAGTGAAGGAAATAAGCTC
TTTAAAGGGGAAATTTCTTGAGGTGCACTCTCAGACTCGATCACATTCAT
GGGTTTCTTCAAATTCCATAAGCAACTTACAGAGGCCAAGATCGAGTAGT
GACAGGTGGTTGCATGCAGCACCTGAGAGGGATTTAGACAGCATACTGTC
TTTGCATTCATCTTTGTATAATTTTGAACAACGTAGAGAGACTGTTTGAT
GATCGTATTCTGTCCGTTTTTCCCAATAAGAGAGCTTTACTTGAAATACA
AGTTTTGAAGGCTTTTTTGTATTTTTGCCCTTTCTGTACCAAAAAGAAGC
ACATGTAGGATTTTTGGGAGGGAAGAGACATTAAAACTGTTGATGTATTT
TAGTATGTATGTCGTTCTAAATCTGAACATCATCTAGTGATAGAATTGTC
GAATGGTGTTTCCATTTACTTTTTACTTTTCATCGAATTTCACTTTCTTA
CACCAT back to topprotein sequence of Vigun05g240200.1_Vu_IT97K-499-35_v1.1 >Vigun05g240200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g240200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g240200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=874bp
MANDEDQRQDSPSTNEPQNAASSDSESESEYDSDYSYDEAEDDAFRRAFQ
FREDEDDEVPVEDKRNNPETNFQDFSRALESPAVKELHEELDPLIAEEEN
PFDFPEDPENWTEQDLRELWADGDPEIGGTGWDPALATEEEYNYVNEQLA
EGEDPPIAPFYLPFRKHYPPIPDNHYDIATPKDTIEELDRIEEFLRWVSY
VFQDGSTYEGTVWDDYAHGKGVYVSDDRLIRYEGEWFQNDVEGHGVLELD
IPVIEPTPGSKLEAKMRAQGRIIARDFMSPEDREWLEKDVEDMYDLADGE
YEIPYYENEEWIKEFGSKPEKGRYRYAGQWKHGRMHGCGVFEVNERVLHG
RFYFGEYVNKYEGCDEEISGMHAAIAEVAAAKARMFINKPDGMVREERGP
YTDPQHPYFYEEDDVWMAPGFINQFYEVPDYWKVYVKEVDEEREMWLNSF
YRAPLRLPMPAELEHWWSKEENSELPEFVLINKEPEPDPEDPSKLIYTED
PLILHTPTGHIINYVEDEHYGIRLFWQPPLKEGEDVDPEKAVFLPLGYDE
FFGVDTDKKKESILLRIVLAIENVCKPWLDKLDKWTEEQKKIKEEEKKEL
EEDLELLEAEIGLEEAVEEMERLLRIREKEEEKKAEMGLLDDDEEDGDDD
MASVPKQEKEAPAKVEEEAPAKVEEEAPAEVEEEDDDDDDDDGDDEDEDN
SAQSSFGSVEQGQTTEQPKAKPGKSPFSTLSLAFARSSLISTVPSKLQQS
FSFWDMGRSKLESGPLPSIDRSSNMKTVCSVSFRPVTSQKGSLKTVGKTH
GKVKEISSLKGKFLEVHSQTRSHSWVSSNSISNLQRPRSSSDRWLHAAPE
RDLDSILSLHSSLYNFEQRRETV* back to topmRNA from alignment at Vu05:43321524..43327934+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Vigun05g240200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g240200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g240200.1; organism=Vigna unguiculata; type=mRNA; length=6411bp; location=Sequence derived from: Vu05:43321524..43327934+ (Vigna unguiculata
AGTTTATAGAATTGACTTCTAAAATGAGATGAAATAGTGAAACGACAGAG
AAAGGTGTCGTATGACAAGAACCCTCTTTCTCTTTTGTTTGCCTCTATCG
TCGTTTGTAACGATAGGTAGCTGCTGGTAGGATTCATGTAATGAATGTAA
CTGTGTTATCTCCTTCACTCACTCACTAACTCACCTTATCCTTTTCGCAT
TACTCTCTAACCGTTCCGTGTTCCCAAATGGCCAACGACGAAGACCAACG
GCAAGACTCTCCTTCGACCAATGAGCCCCAAAATGCCGCCTCCTCAGACT
CCGAATCCGAATCCGAATACGACTCCGACTACTCCTACGACGAGGCGGAG
GATGACGCCTTCCGCCGTGCCTTCCAGTTCCGCGAAGACGAGGACGACGA
GGTGCCGGTGGAAGACAAGCGCAACAACCCGGAGACCAACTTTCAAGACT
TCAGCCGAGCGCTGGAGAGCCCGGCGGTGAAGGAGCTGCATGAGGAGCTG
GACCCCTTGATTGCGGAGGAGGAAAACCCTTTCGACTTCCCCGAGGACCC
CGAGAACTGGACCGAGCAGGACCTTCGCGAGCTTTGGGCGGATGGGGACC
CCGAAATTGGCGGCACAGGGTGGGACCCTGCTTTGGCCACCGAGGAAGAG
TACAACTACGTTAACGAACAGCTTGCGGAGGGAGAAGACCCTCCCATTGC
GCCATTCTATCTTCCTTTCCGCAAACATTACCCTCCAATTCCCGATAACC
ACTACGACATTGCCACTCCCAAGGATACTATCGAAGAGTTGGATAGGATT
GAAGAGTTCCTCAGATGGGTTAGCTACGTTTTCCAAGATGGTAGCACGTA
TGTGTATCGTTCTATACTATAACAGTAACACTTACATGATTCTTTTTAAT
GTTCACTTTAATGTGCTACATGGTTGTTGCTGTTGGGTAGATTATGCGTT
TCTTTTTCAGCTATGAAGGGACCGTTTGGGATGACTATGCTCATGGGAAA
GGAGTTTATGTTTCGGACGATAGATTGATCAGGTTTGTCTTTACTCCGTT
GAGGTGTTTCTTCTAAGGGTATGTTTGTTTTTTCATTGAGTTCCGTTGAA
CACGAATGTCGTGAGTTATGGATTCTCGTTGTAGAAAACGATTATTAAGT
AAAACTAACACACTAGGTGATGATAATGCCGGTGGTAAACTAAAACAACA
TTATATATGTGTTGATTCAAGCAATGTAATTTGAAAGAGGGGAGAATTTT
GTCTAGGTTTTTGTTGTGCCGTTGGTCTGATGAGACAAGGCATTCAAAAT
TCAGATGCTATTGATTGATAACGGTTTTAAATATTGGTTTGTGGCTGCAC
TTTCAGCCACAGTGTCAAGATTGTTGGAGTTACTGATCGCAATTGCAGCC
ACATCAGCTGCATTATTCTGTAATTTCCCACAACAACAAGGATAGAGATG
AATCCACAGCCACAATGTAAAATTCCCAGTTAACGTGAGCACAGGAAAGC
TGACTTGAAAAAATGGTTAGGTTAGCTGGTATCCTTTTGTTAAATTTGTA
AGCATATGGTGCCTGTCATACTTCTTTGTGCAAAACCCATTCATTGGCCT
GAAGCATTAACAGATTTGCCATGGAAACTTGTGGGAGGTGACAATGACCA
ATTTTTTGGTGTTTTTTAAGCGAATACACTCTACTAAGTTCAGCAAATTT
CCATTGGCAACCTCAAATTGAGGAATTCAATTCTCACTCTTTAGGCTAAC
TGGGTCTGATGGCCATGTTTTTAGGGTTCTATTGCAGTCTTTGACTCCCT
GTTAGCTAAGTATTTCAATTAGGGCCAGCATACCCATTTTCCCCTCAGAC
AAATTGTCTCTTCATTTCTTGACATGTCCATCTTCAACGACTATTTTTTA
ATGCCATTGATATTCTGCAATGTATTATCTTTTCATAGGTATGAAGGTGA
ATGGTTTCAAAATGATGTAGAGGGTCATGGTGTTCTTGAACTTGATATAC
CTGTCATAGAGCCTACTCCTGGGTCCAAGTATGTATCTTTCTTTGAATTG
CTCTGTTACGTCTTAATGAAGTCTTAGATTGTGGCACAGTTTGAATATAC
ATTCATTTTCTTGAGAACAAACTTGGGATGCTTTTATCCATGCCCTCAGG
CTTGAAGCAAAGATGCGAGCTCAAGGAAGGATTATAGCTAGGGATTTTAT
GTCCCCAGAAGACAGAGAATGGCTTGAGAAGGATGTTGAAGATATGTATG
ATCTTGCAGATGGGGAGTATGAAATCCCCTATTATGAGAATGAGGAATGG
ATAAAGGAATTTGGAAGCAAGCCGTAAGTTTAATTGTCTATTTCTATTTA
GTCTATTCATTTTGAATCACTTTATTATCTTTAAGATAAGTGCCACTTTG
CAATCCTTCTCTCTATAAATTACATGCATTGTCTCTTTATATCTCTTTGA
ACATTATTACTAGTACTGAAAGAGGTTTTATATTTTGTGTCCAGGGAGAA
AGGTCGATATCGTTATGCTGGTCAGTGGAAGCATGGCAGGATGCATGGAT
GTGGTGTATTTGAAGTCAATGAGCGTGTCCTACATGTGGGTGAATGGATT
ATACAAAATTTATGTTTCATCTTATTAACTATAATCAACCTCTTTGCCAA
TTTTTACTGAACTAGGCAGAGAAAGCTGGACTCTGTAGATGGAAAATAAT
TGCACAACTTACATGTTTTGCTTTAGTTTCCTGGAGTGACCTACATTCCA
TATGCTTATTGAGACCGTTTTTTATTACCCAACATACTTCAATTTTGTGT
TTATGGTGTATTATCTACATTATTCGGTTCATTTTTGCCACTTAATTAAT
TGGGGGAATTGCAAGGTATCTCAACATAAGGGATGATGTCATTTTTTTCC
AACACGTTTATGACATGTAGTAGACCTATTTTCTTTCCTGGTTACATAAT
GTGTGTGCATGCAGGGTAGATTTTATTTTGGAGAATATGTGAACAAGTAT
GAGGGATGTGATGAAGAAATTTCAGGGGTATTTTTTCATAACTTTTCCAT
CTCTGTATAATGAAAAACTAATCATCCAAGACCTGTGTCAATATCTTGAT
CTTTCTGATATTCTGTCAATTTCAGATGCATGCTGCTATAGCAGAAGTTG
CTGCTGCAAAGGCTCGCATGTTTATTAACAAACCAGATGGAAGTATGTTG
TTTGACTTCTTTGAAAATAATGGAAAACCTTATATGCATCTTTTTCGGGT
GGTGGGACCGGTTGTGGAGTATCTCTGATTTTAGGTTTTGCCATTTCTTT
GGTTGCTAGATCCATTTATTAGTGCATGTGTTATTGATTTAGTCATAAAA
TTTCATGTTTATTCTTTCTTCTTTCTACATCTTATCACCATTTAGCATAT
GTTTGGGTGATATTATTAGAAAACAATTGTTTATTTTTCATAACTCTCTA
GATGCTGAAAAAAGTGGGCAATTTAGTTATCTAAAATTCTTTCAGCTAAG
CAAACAATTTTATTTTTTAATACCAGTTAGGATTTAGGAAAGGAACACTT
ATTGCCAGTGATTTTTTGTTTCACAATTTGTGCGTTCTTCGTCATGATAT
AAAGATCAATGACCAATTGTAACTTCACACTGCAAATATGTATCTCATTT
GATTCTCCTTTTTGCCTCTAGACAAAAGTCTCGTCTAGTAAGGATGATTA
AACATGGATGTTGGCTCTTGGCACACTAGTCTTTCTGTTTTTATTGTATG
GTTGAAATATTATATATGTGCTATTTTGGAATGGAATTGTTTCCCCCCTC
TTTTCCTGACTGGCGTGGTGCTGATTTTATTTTGTTTATCATTATTTGTT
ACACATCATTTAACATTTTGTTTTTGCAGTGGTTAGAGAAGAGAGAGGTC
CTTATACTGATCCACAGCATCCTTACTTTTATGAAGAAGACGATGTGTGG
ATGGCACCTGGCTTCATTAATCAGTTTTATGAAGTGAGGCTTATTGGCAA
TGTTTTATCCTAATATATTGCTTATTGTCATCTTATGCAAGGACGTTGAA
ACATGCATATGGTTCTATCTCAGGTCCCGGATTACTGGAAAGTATATGTG
AAAGAAGTAGACGAAGAAAGAGAAATGTGGTTGAACTCTTTCTATAGAGC
TCCTCTGAGGTTACCCATGCCAGCTGAACTTGAGCACTGGTGGTCAAAAG
GTATTTGTTCTTCCTGTTTTTCTGTATGAACAAGTAGAAAAGTTCTTAAT
TGATTCTTCCTTCAAATGCTTGGTCAGAGGAGAATAGCGAGCTTCCTGAA
TTTGTCCTTATTAATAAGGAACCAGAGCCTGATCCTGAAGATCCTTCAAA
GCTTATATATACTGAGGATCCTTTGATCCTCCATACACCAACTGGACATA
TTATCAATTATGTTGAGGATGAGCATTACGGGATACGTTTATTTTGGCAG
CCACCTTTGAAAGAGGGTGAGGATGTAGATCCTGAAAAGGCTGTATTCCT
GCCCCTTGGTTATGATGAGTTTTTTGGAGTAGACACGGATAAAAAAAAGG
AGAGCATATTGTTGCGTATTGTACTTGCAATTGAAAATGTCTGCAAGCCG
TGGCTTGATAAGCTGGATAAATGGACTGAAGAGCAGAAAAAAATTAAGGA
AGAGGAAAAGAAAGAACTTGAGGAAGATCTTGAACTGCTGGAAGCTGAAA
TTGGACTGGAAGAGGCTGTTGAGGAAATGGAAAGGTTATTGCGCATAAGA
GAGAAAGAAGAGGAAAAGAAGGCAGAGATGGGTTTGCTGGATGATGATGA
AGAAGATGGTGATGATGATATGGCTTCTGTACCCAAACAAGAGAAAGAAG
CTCCTGCAAAGGTGGAAGAGGAAGCTCCTGCAAAGGTAGAAGAGGAAGCT
CCTGCAGAGGTGGAAGAGGAAGATGATGATGATGATGATGATGATGGAGA
TGATGAAGACGAGGATAATAGTGCACAATCAAGTTTCGGGTCTGTTGAGC
AGGGACAGACAACAGAGCAGCCTAAGGCAAAACCTGGGAAATCTCCATTT
TCTACATTGTCACTTGCATTTGCTCGTAGCAGCCTTATCTCCACTGTGAG
TTATTCCGAAATTTATTTAATGCATCTATTTCATATACATGACTGCATCT
TGTATTCAAATTATATGCTCTCTTGTGTATATCCTGGTTCCACTGAATAA
TCAGGGAGCTGCATTGTTTATCATACAAAATAAAATTATAATTTTCTCCT
TTTGAATGTCATTTAGCAATTTTAATGGATTTATAAGACAGTTTTATGCT
TCATTTTATTATTCTTTGATCGAACAATTTAACAAGTTAACTGATATTAC
ATTGGACTTGTCTCTTCTCAGATACCACCCAAATATATACTTCAATGAGT
TCATTCCTGAACGGCTTTTTCCCCTGGTTGTGGAAAATAATAATATTAGA
ACAACCCAAGTATTGAAAACTCTGGCAACCATACTCCTGTAAATATTTCT
CATAGTTTATCAGTTTTGAATAATGAGATAAAGTGTGAAAAGGAATATGG
GATAACTACACTGAACTCCCTTGGGACTAGCGGTAATTACAGCTAGTGAT
GGTACATTTGCTAATGTGGTTGCACCACCTTTGTGCTATTTTGGTCATCT
TAACTCTACTTCATTTCAATGTTTATGGGAGAAAGTTGTTTGTTTTACTA
GTTTGAATTTATAACAAACAAGTTCATGAATATTTTTCTCTCTCGGTTGG
TTTATCAGGTTCCATCCAAGCTGCAACAATCATTTTCATTCTGGGACATG
GGAAGATCGAAACTAGAGTCAGGTCCTCTTCCGAGCATTGATCGCTCCAG
TAATATGAAAACAGTTTGTTCAGTCAGTTTCCGTCCTGTGACCAGCCAGA
AGGGTAGCTTGAAGACTGTGGGGAAAACTCATGGGAAAGTGAAGGAAATA
AGCTCTTTAAAGGGGAAATTTCTTGAGGTGCACTCTCAGACTCGATCACA
TTCATGGGTTTCTTCAAATTCCATAAGCAACTTACAGAGGCCAAGATCGA
GTAGTGACAGGTGGTTGCATGCAGCACCTGAGAGGGATTTAGACAGCATA
CTGTCTTTGCATTCATCTTTGTATAATTTTGAACAACGTAGAGAGACTGT
TTGATGATCGTATTCTGTCCGTTTTTCCCAATAAGAGAGCTTTACTTGAA
ATACAAGTTTTGAAGGCTTTTTTGTATTTTTGCCCTTTCTGTACCAAAAA
GAAGCACATGTAGGATTTTTGGGAGGGAAGAGACATTAAAACTGTTGATG
TATTTTAGTATGTATGTCGTTCTAAATCTGAACATCATCTAGTGATAGAA
TTGTCGAATGGTGTTTCCATTTACTTTTTACTTTTCATCGAATTTCACTT
TCTTACACCAT back to topCoding sequence (CDS) from alignment at Vu05:43321524..43327934+ >Vigun05g240200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g240200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g240200.1; organism=Vigna unguiculata; type=CDS; length=2622bp; location=Sequence derived from: Vu05:43321524..43327934+ (Vigna unguiculata
ATGGCCAACGACGAAGACCAACGGCAAGACTCTCCTTCGACCAATGAGCC
CCAAAATGCCGCCTCCTCAGACTCCGAATCCGAATCCGAATACGACTCCG
ACTACTCCTACGACGAGGCGGAGGATGACGCCTTCCGCCGTGCCTTCCAG
TTCCGCGAAGACGAGGACGACGAGGTGCCGGTGGAAGACAAGCGCAACAA
CCCGGAGACCAACTTTCAAGACTTCAGCCGAGCGCTGGAGAGCCCGGCGG
TGAAGGAGCTGCATGAGGAGCTGGACCCCTTGATTGCGGAGGAGGAAAAC
CCTTTCGACTTCCCCGAGGACCCCGAGAACTGGACCGAGCAGGACCTTCG
CGAGCTTTGGGCGGATGGGGACCCCGAAATTGGCGGCACAGGGTGGGACC
CTGCTTTGGCCACCGAGGAAGAGTACAACTACGTTAACGAACAGCTTGCG
GAGGGAGAAGACCCTCCCATTGCGCCATTCTATCTTCCTTTCCGCAAACA
TTACCCTCCAATTCCCGATAACCACTACGACATTGCCACTCCCAAGGATA
CTATCGAAGAGTTGGATAGGATTGAAGAGTTCCTCAGATGGGTTAGCTAC
GTTTTCCAAGATGGTAGCACCTATGAAGGGACCGTTTGGGATGACTATGC
TCATGGGAAAGGAGTTTATGTTTCGGACGATAGATTGATCAGGTATGAAG
GTGAATGGTTTCAAAATGATGTAGAGGGTCATGGTGTTCTTGAACTTGAT
ATACCTGTCATAGAGCCTACTCCTGGGTCCAAGCTTGAAGCAAAGATGCG
AGCTCAAGGAAGGATTATAGCTAGGGATTTTATGTCCCCAGAAGACAGAG
AATGGCTTGAGAAGGATGTTGAAGATATGTATGATCTTGCAGATGGGGAG
TATGAAATCCCCTATTATGAGAATGAGGAATGGATAAAGGAATTTGGAAG
CAAGCCGGAGAAAGGTCGATATCGTTATGCTGGTCAGTGGAAGCATGGCA
GGATGCATGGATGTGGTGTATTTGAAGTCAATGAGCGTGTCCTACATGGT
AGATTTTATTTTGGAGAATATGTGAACAAGTATGAGGGATGTGATGAAGA
AATTTCAGGGATGCATGCTGCTATAGCAGAAGTTGCTGCTGCAAAGGCTC
GCATGTTTATTAACAAACCAGATGGAATGGTTAGAGAAGAGAGAGGTCCT
TATACTGATCCACAGCATCCTTACTTTTATGAAGAAGACGATGTGTGGAT
GGCACCTGGCTTCATTAATCAGTTTTATGAAGTCCCGGATTACTGGAAAG
TATATGTGAAAGAAGTAGACGAAGAAAGAGAAATGTGGTTGAACTCTTTC
TATAGAGCTCCTCTGAGGTTACCCATGCCAGCTGAACTTGAGCACTGGTG
GTCAAAAGAGGAGAATAGCGAGCTTCCTGAATTTGTCCTTATTAATAAGG
AACCAGAGCCTGATCCTGAAGATCCTTCAAAGCTTATATATACTGAGGAT
CCTTTGATCCTCCATACACCAACTGGACATATTATCAATTATGTTGAGGA
TGAGCATTACGGGATACGTTTATTTTGGCAGCCACCTTTGAAAGAGGGTG
AGGATGTAGATCCTGAAAAGGCTGTATTCCTGCCCCTTGGTTATGATGAG
TTTTTTGGAGTAGACACGGATAAAAAAAAGGAGAGCATATTGTTGCGTAT
TGTACTTGCAATTGAAAATGTCTGCAAGCCGTGGCTTGATAAGCTGGATA
AATGGACTGAAGAGCAGAAAAAAATTAAGGAAGAGGAAAAGAAAGAACTT
GAGGAAGATCTTGAACTGCTGGAAGCTGAAATTGGACTGGAAGAGGCTGT
TGAGGAAATGGAAAGGTTATTGCGCATAAGAGAGAAAGAAGAGGAAAAGA
AGGCAGAGATGGGTTTGCTGGATGATGATGAAGAAGATGGTGATGATGAT
ATGGCTTCTGTACCCAAACAAGAGAAAGAAGCTCCTGCAAAGGTGGAAGA
GGAAGCTCCTGCAAAGGTAGAAGAGGAAGCTCCTGCAGAGGTGGAAGAGG
AAGATGATGATGATGATGATGATGATGGAGATGATGAAGACGAGGATAAT
AGTGCACAATCAAGTTTCGGGTCTGTTGAGCAGGGACAGACAACAGAGCA
GCCTAAGGCAAAACCTGGGAAATCTCCATTTTCTACATTGTCACTTGCAT
TTGCTCGTAGCAGCCTTATCTCCACTGTTCCATCCAAGCTGCAACAATCA
TTTTCATTCTGGGACATGGGAAGATCGAAACTAGAGTCAGGTCCTCTTCC
GAGCATTGATCGCTCCAGTAATATGAAAACAGTTTGTTCAGTCAGTTTCC
GTCCTGTGACCAGCCAGAAGGGTAGCTTGAAGACTGTGGGGAAAACTCAT
GGGAAAGTGAAGGAAATAAGCTCTTTAAAGGGGAAATTTCTTGAGGTGCA
CTCTCAGACTCGATCACATTCATGGGTTTCTTCAAATTCCATAAGCAACT
TACAGAGGCCAAGATCGAGTAGTGACAGGTGGTTGCATGCAGCACCTGAG
AGGGATTTAGACAGCATACTGTCTTTGCATTCATCTTTGTATAATTTTGA
ACAACGTAGAGAGACTGTTTGA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR003409 | MORN |
|
