Vigun05g249500.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: GRIK2_ARATH (Serine/threonine-protein kinase GRIK2 OS=Arabidopsis thaliana OX=3702 GN=GRIK2 PE=1 SV=1) HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0 Identity = 260/407 (63.88%), Postives = 315/407 (77.40%), Query Frame = 1 Query: 19 FSFSKMIGCCGCFGFVKKPRRRRAKRSISNFLSHGLLYDVETEGDESFSGDVTSNATSGDDNEAHVVRN-----RSEDILNFRAENGMVCRPFPVKETIELVRSEDEYGNKMINEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHLQKLRVAPFETAMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCEGTGRPCALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECCL--GLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPDDINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVIGNDGPLPGYLCWCKRKSLMAADFDESN 1218 F F++ IGC GCFG ++ K YD +T S DVTS A ++ + V RSE+IL +R +NG++CR PV+ET EL+R EDE G+K INEY+R KIGSGSY KV LYRS+LDG +YAIK+FHKSHL +LRVAP ETAM+DVLREV+IMK++EHPNIVNLIEVIDDPE+D FYMVLEYV+ KWV +G+G P ALGE+TARKYLRDIV+GL YLHAH+++HGDIKPDNLL+T GTVKI DFSVSQ F+D +D+LRRSPGTPVFTAPECCL G+TY G+A+DTWAVGVTLYCMILG+YPFL DTLQDTYDKIVN+PL++PD +NP L++LIEGLLCKDP +RMTL +V+EH WVIG DG +P Y CWCKR + + E+N Sbjct: 6 FLFARTIGCFGCFGSSGSRNQQSPKP-----------YDDDTH---SCDSDVTSTARGEEEEDEEEVEQKSRSKRSEEILKYRLDNGLICRHIPVRETNELIRGEDENGDKTINEYVRVCKIGSGSYGKVVLYRSTLDGQYYAIKAFHKSHLLRLRVAPSETAMSDVLREVMIMKILEHPNIVNLIEVIDDPETDHFYMVLEYVDGKWVYDGSGPPGALGEKTARKYLRDIVTGLMYLHAHDVIHGDIKPDNLLVTSSGTVKIGDFSVSQVFKDDDDQLRRSPGTPVFTAPECCLVSGITYSGRAADTWAVGVTLYCMILGQYPFLADTLQDTYDKIVNNPLIIPDGLNPLLRDLIEGLLCKDPSQRMTLKNVSEHPWVIGEDGHVPEYFCWCKRNAASKIEEGEAN 398
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: GRIK1_ARATH (Serine/threonine-protein kinase GRIK1 OS=Arabidopsis thaliana OX=3702 GN=GRIK1 PE=1 SV=1) HSP 1 Score: 510.375 bits (1313), Expect = 3.990e-180 Identity = 250/399 (62.66%), Postives = 306/399 (76.69%), Query Frame = 1 Query: 19 FSFSKMIGCCGCFGFVKKPRRRRAKRSISNFLSHGLLYDVETEGDESFSGDVTSNATSGDDNEAHVVRNRSEDILNFRAENGMVCRPFPVKETIELVRSEDEYGNKMINEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHLQKLRVAPFETAMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCEGTGRPCALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECCLGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPDDINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVIGNDGPLPGYLCWCKRKSLMAADFDES 1215 F+F++++ C GCFG R++ S + + +D G+ S G ++ E RSE+IL + +NG+VCR FPVKET +L R EDE GNK INE++RE KIGSGSY KV LYRS++D HYAIK+FHKSHL +LRVAP ETAM DVLREV+IMK +EHPNIVNLIEVIDDPE DDFYMVLEYV+ KW + +G P ALGE TARKYLRD+V+GL YLHAHN++HGDIKPDNLL+T G VKI DFSVSQ F+D +D+LRRSPGTPVFTAPECCLG+TY G+++DTWAVGVTLYCMILG+YPFLGDTLQDTYDKIV++PL++P+ +NP+L++LIEGLLCKDP +RMTL VAEH W+ G DG + Y CWCKRK+ D + S Sbjct: 6 FAFAQVMSCFGCFG-----GSERSRHSPNPYDDDTYSHD---SGETSNPGGDDEEGEEEEEVEELSRSKRSEEILKCKLQNGLVCRQFPVKETNKLTRGEDEDGNKTINEFVRERKIGSGSYGKVVLYRSTVDDKHYAIKAFHKSHLSRLRVAPSETAMGDVLREVMIMKTLEHPNIVNLIEVIDDPEFDDFYMVLEYVDGKWAYDDSGPPGALGEITARKYLRDVVAGLMYLHAHNVIHGDIKPDNLLVTSTGRVKIGDFSVSQVFKDDDDQLRRSPGTPVFTAPECCLGITYSGRSADTWAVGVTLYCMILGQYPFLGDTLQDTYDKIVHNPLIIPEGLNPRLRDLIEGLLCKDPNQRMTLKAVAEHPWITGEDGAISEYCCWCKRKAEEEEDQNHS 396
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: Y0010_DICDI (Probable serine/threonine-protein kinase DDB_G0279405 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279405 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 3.235e-61 Identity = 118/287 (41.11%), Postives = 167/287 (58.19%), Query Frame = 1 Query: 289 KETIELVRSEDEYGNKMINEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHLQKLRVAPFE-TAMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCEGTGRPCALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECCLGLTY--HGKASDTWAVGVTLYCMILGEYPFLGDT--LQDTYDKIVNDPLVLPDDINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWV 1134 KET+ + + G+KM+NEY+ K+G G++ KV L + YAIK F+K L+K + A DVL+E+ IMK + H N+V L EVI+DP+ + Y+V+EY+E + E+ ARKY RDIV GL YLH ++H D+KP+NLL+ G VKI DF VS F+D +D +R S G+P F APE C + GK D WA+GV+LYC+I PF+ T L D YD+IVN P +I+ L +L + LL K+P R+ + ++ H W Sbjct: 181 KETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSAN----ETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDD-DDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWT 462
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: KKCC1_HUMAN (Calcium/calmodulin-dependent protein kinase kinase 1 OS=Homo sapiens OX=9606 GN=CAMKK1 PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 7.420e-57 Identity = 119/298 (39.93%), Postives = 167/298 (56.04%), Query Frame = 1 Query: 337 MINEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHL---------------QKLRVAPFET--AMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCEGTGRPC--ALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECC--LGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPD--DINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVIGN-DGPLP 1158 +N+Y + +IG G+Y V L + + HYA+K K L Q + P + + V +E+ I+K ++H N+V LIEV+DDP D+ Y+V + + V E PC EE AR YLRD++ GL YLH IVH DIKP NLL+ G VKI DF VS FE + +L + GTP F APE G ++ GKA D WA GVTLYC + G+ PF+ D + + KI N+P+V P+ +I+ +LK+LI +L K+PE R+ + D+ H WV N + PLP Sbjct: 124 QLNQYKLQSEIGKGAYGVVRLAYNESEDRHYAMKVLSKKKLLKQYGFPRRPPPRGSQAAQGGPAKQLLPLERVYQEIAILKKLDHVNVVKLIEVLDDPAEDNLYLVFDLLRKGPVME---VPCDKPFSEEQARLYLRDVILGLEYLHCQKIVHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDAQLSSTAGTPAFMAPEAISDSGQSFSGKALDVWATGVTLYCFVYGKCPFIDDFILALHRKIKNEPVVFPEEPEISEELKDLILKMLDKNPETRIGVPDIKLHPWVTKNGEEPLP 418
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: KKCC_CAEEL (Calcium/calmodulin-dependent protein kinase kinase OS=Caenorhabditis elegans OX=6239 GN=ckk-1 PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 1.508e-56 Identity = 126/319 (39.50%), Postives = 172/319 (53.92%), Query Frame = 1 Query: 268 VCRPFPVKETIELVRSEDEYGNKMINEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHLQK----LRVAP----FETAMTDVLR--------EVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCE-GTGRPCALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECCL---GLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPDD--INPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVIGNDGPLP 1158 + RP +++ RSE +N+Y +IG GSY V L + D N YA+K K L K R P E A VLR E+ I+K + HPN+V L+EV+DDP + YMV E+VE + E T +P L E+TA Y RD + GL YLH IVH DIKP NLL++ G VKI DF VS FE + L + GTP F APE Y G+A D W++G+TLY ++G PF+ + + + KI NDP+V P+ ++ L+++I G+L KDP R+ L +V H WV DG +P Sbjct: 106 LSRPTRYVKSVSQQRSESYI---QLNQYRLMEEIGQGSYGIVKLAYNEEDKNLYALKVLDKMKLLKNFACFRQPPPRRNKENAAPSVLRNPLQLVQKEIAILKKLSHPNVVKLVEVLDDPNDNYLYMVFEFVEKGSILEIPTDKP--LDEDTAWSYFRDTLCGLEYLHYQKIVHRDIKPSNLLLSDIGQVKIADFGVSCEFEGIDAFLSGTAGTPAFMAPEALTEGANHFYSGRAQDIWSLGITLYAFVIGTVPFVDNYIIALHKKIKNDPIVFPEAPILSEALQDIILGMLKKDPGHRLMLHEVKVHTWVT-RDGTVP 418
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: KKCC1_RAT (Calcium/calmodulin-dependent protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Camkk1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.254e-54 Identity = 115/298 (38.59%), Postives = 165/298 (55.37%), Query Frame = 1 Query: 337 MINEYIREYKIGSGSYAKVALYRSSLDGNHYAIK-----------SFHKSHLQKLRVAPFETAMTDVL------REVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCEGTGRPC--ALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECC--LGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPD--DINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVIGN-DGPLP 1158 +N+Y + +IG G+Y V L + + HYA+K F + + AP +L +E+ I+K ++H N+V LIEV+DDP D+ Y+V + + V E PC EE AR YLRDI+ GL YLH IVH DIKP NLL+ G VKI DF VS FE + +L + GTP F APE G ++ GKA D WA GVTLYC + G+ PF+ + + + KI N+ +V P+ +++ +LK+LI +L K+PE R+ + D+ H WV + + PLP Sbjct: 124 QLNQYKLQSEIGKGAYGVVRLAYNEREDRHYAMKVLSKKKLLKQYGFPRRPPPRGSQAPQGGPAKQLLPLERVYQEIAILKKLDHVNVVKLIEVLDDPAEDNLYLVFDLLRKGPVME---VPCDKPFPEEQARLYLRDIILGLEYLHCQKIVHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDAQLSSTAGTPAFMAPEAISDTGQSFSGKALDVWATGVTLYCFVYGKCPFIDEYILALHRKIKNEAVVFPEEPEVSEELKDLILKMLDKNPETRIGVSDIKLHPWVTKHGEEPLP 418
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: KKCC1_MOUSE (Calcium/calmodulin-dependent protein kinase kinase 1 OS=Mus musculus OX=10090 GN=Camkk1 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.112e-54 Identity = 119/298 (39.93%), Postives = 165/298 (55.37%), Query Frame = 1 Query: 337 MINEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHLQKL-----RVAPFETAMTD------------VLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCEGTGRPC--ALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECC--LGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPD--DINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVIGN-DGPLP 1158 +N+Y + +IG G+Y V L + + HYA+K K L K R P + T V +E+ I+K ++H N+V LIEV+DDP D+ Y+V + + V E PC EE AR YLRDI+ GL YLH IVH DIKP NLL+ G VKI DF VS FE + +L + GTP F APE G ++ GKA D WA GVTLYC + G+ PF+ D + + KI N+ +V P+ +++ LK+LI +L K+PE R+ + D+ H WV + + PLP Sbjct: 124 QLNQYKLQSEIGKGAYGVVRLAYNESEDRHYAMKVLSKKKLLKQYGFPRRPPPRGSQATQGGPAKQLLPLERVYQEIAILKKLDHVNVVKLIEVLDDPAEDNLYLVFDLLRKGPVME---VPCDKPFPEEQARLYLRDIILGLEYLHCQKIVHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDAQLSSTAGTPAFMAPEAISDSGQSFSGKALDVWATGVTLYCFVYGKCPFIDDYILTLHRKIKNEAVVFPEEPEVSEDLKDLILRMLDKNPETRIGVSDIKLHPWVTKHGEEPLP 418
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: KKCC2_HUMAN (Calcium/calmodulin-dependent protein kinase kinase 2 OS=Homo sapiens OX=9606 GN=CAMKK2 PE=1 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 1.144e-53 Identity = 116/299 (38.80%), Postives = 162/299 (54.18%), Query Frame = 1 Query: 340 INEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHLQKLRVAPFET-------------------AMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCE-GTGRPCALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECCLGLT---YHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPD--DINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVIGNDG-PLP 1158 +N+Y + +IG GSY V L + D +YA+K K L +R A F + V +E+ I+K ++HPN+V L+EV+DDP D YMV E V V E T +P L E+ AR Y +D++ G+ YLH I+H DIKP NLL+ G +KI DF VS F+ + L + GTP F APE L T + GKA D WA+GVTLYC + G+ PF+ + + + KI + L PD DI LK+LI +L K+PE R+ + ++ H WV + PLP Sbjct: 162 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKL--IRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP--LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPE-SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTRHGAEPLP 455
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: KKCC2_RAT (Calcium/calmodulin-dependent protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Camkk2 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.383e-53 Identity = 116/300 (38.67%), Postives = 162/300 (54.00%), Query Frame = 1 Query: 337 MINEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHLQKLRVAPFET-------------------AMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCE-GTGRPCALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAFEDGNDELRRSPGTPVFTAPECCLGLT---YHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPD--DINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVIGNDG-PLP 1158 +N+Y + +IG GSY V L + D +YA+K K L +R A F + V +E+ I+K ++HPN+V L+EV+DDP D YMV E V V E T +P L E+ AR Y +D++ G+ YLH I+H DIKP NLL+ G +KI DF VS F+ + L + GTP F APE L T + GKA D WA+GVTLYC + G+ PF+ + + + KI + L PD DI LK+LI +L K+PE R+ + ++ H WV + PLP Sbjct: 160 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKL--IRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP--LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPE-SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTRHGAEPLP 454
BLAST of Vigun05g249500.1 vs. DB:Swiss
Match: SSP1_SCHPO (Serine/threonine-protein kinase ssp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssp1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.570e-53 Identity = 121/298 (40.60%), Postives = 163/298 (54.70%), Query Frame = 1 Query: 286 VKETIELVRSEDEY-GNKMINEYIREYKIGSGSYAKVALYRSSLDGNHYAIKSFHKSHLQ-KLRVAPFETAMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDDFYMVLEYVESKWVCEGTGRPCALGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIVDFSVSQAF-----EDGNDELRRSPGTPVFTAPECCLG-----LTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNDPLVLPD--DINPQLKNLIEGLLCKDPEKRMTLGDVAEHVWVI 1137 VKET ++ + D + G K IN Y ++G G + KV L R ++ AIK K+ + KL A + V RE+ I+K HPN+V L EVIDDP S Y+VLEY+ V L AR+Y RD+V GL YLH I+H DIKP NLL+ VKI DF VS ED + EL ++ GTP F APE C +A D WA+GVTL+C++ G PF + +DKIVN+ L +P DI + ++L++ LLCKDPE+R+TL +V H W + Sbjct: 113 VKETKKIRKRFDRFSGRKYINHYEIIKELGRGMHGKVKLGRDTVTRELLAIKIIPKTERRPKLGRANASSQKEKVRREIAILKKCVHPNVVRLREVIDDPSSTKVYLVLEYMSGGEVPWTDCDSPVLSISEARQYFRDVVLGLEYLHYQGIIHRDIKPANLLLNSSNCVKISDFGVSYIANAGLNEDNDVELAKTVGTPAFFAPELCWTDLDRPRPKISEAIDVWALGVTLFCLLFGRCPFNASMEYELFDKIVNERLNIPSTPDIGEEGRDLLKRLLCKDPEQRITLVEVKLHPWTL 410 The following BLAST results are available for this feature:
BLAST of Vigun05g249500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g249500.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g249500.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g249500.1; organism=Vigna unguiculata; type=mRNA; length=2361bpback to top protein sequence of Vigun05g249500.1_Vu_IT97K-499-35_v1.1 >Vigun05g249500.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g249500.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g249500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=414bpback to top mRNA from alignment at Vu05:44333766..44339633- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun05g249500.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g249500.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g249500.1; organism=Vigna unguiculata; type=mRNA; length=5868bp; location=Sequence derived from: Vu05:44333766..44339633- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu05:44333766..44339633- >Vigun05g249500.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g249500.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g249500.1; organism=Vigna unguiculata; type=CDS; length=1242bp; location=Sequence derived from: Vu05:44333766..44339633- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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