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Transcript Overview
Name | Vigun05g252000.1 |
Unique Name | Vigun05g252000.1_Vu_IT97K-499-35_v1.1 |
Type | mRNA |
Organism | Vigna unguiculata (cowpea) |
Sequence length | 5384 |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun05g252000.1 | Vigun05g252000.1_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
Vigun05g252000.1_Vu_IT97K-499-35_v1.1 | Vigun05g252000.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun05g252000.1.v1.1.five_prime_UTR.1 | Vigun05g252000.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
Vigun05g252000.1.v1.1.five_prime_UTR.2 | Vigun05g252000.1.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun05g252000.1.v1.1.CDS.1 | Vigun05g252000.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.2 | Vigun05g252000.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.3 | Vigun05g252000.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.4 | Vigun05g252000.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.5 | Vigun05g252000.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.6 | Vigun05g252000.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.7 | Vigun05g252000.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.8 | Vigun05g252000.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.9 | Vigun05g252000.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.10 | Vigun05g252000.1.v1.1.CDS.10_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.11 | Vigun05g252000.1.v1.1.CDS.11_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun05g252000.1.v1.1.CDS.12 | Vigun05g252000.1.v1.1.CDS.12_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun05g252000.1.v1.1.three_prime_UTR.1 | Vigun05g252000.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
Vigun05g252000.1.v1.1.three_prime_UTR.2 | Vigun05g252000.1.v1.1.three_prime_UTR.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
Homology
BLAST of Vigun05g252000.1 vs. DB:Swiss
Match: CNOT4_HUMAN (CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3) HSP 1 Score: 206.838 bits (525), Expect = 1.116e-55 Identity = 109/254 (42.91%), Postives = 159/254 (62.60%), Query Frame = 1
Query: 25 CPLCAEEMDLTDQQLKPCKCGYEICVWCWHHILDMAEKDDTEGRCPACRSPYDKEKIVGMAANCERLVAEVHMEXXXXXXXXXXXXXEARKQLSSVRVIQRNLVYIVGLPLNLADEDLLQQREYFGQYGKVLKVSMSRTAAGVVQQFPNSTCSVYITYSKEEEAIRCIKNVHGFVLEGRPLRACFGTTKYCHAWLRNMPCSNPDCLYLHEIGSQEDSFTKDEIISA----YTRSRVQQITGA-ANNMQRRTGDV 771
CPLC E +++ D PC CGY+IC +CWH I + D G CPACR PY ++ V + E L + EKK K + K K SE RK L+SVRV+Q+NLV++VGL LAD ++L++ EYFG++GK+ KV ++ + + Q P + S Y+TY + E+A+R I+ V+ V++GR L+A GTTKYC +L+NM C PDC+YLHE+G + SFTK+E+ + Y + +Q++ N +Q TG V
Sbjct: 14 CPLCMEPLEIDDINFFPCTCGYQICRFCWHRI-----RTDENGLCPACRKPYPEDPAVYKPLSQEEL-QRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGP--SASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSV 259
BLAST of Vigun05g252000.1 vs. DB:Swiss
Match: CNOT4_MOUSE (CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.391e-55 Identity = 109/254 (42.91%), Postives = 159/254 (62.60%), Query Frame = 1
Query: 25 CPLCAEEMDLTDQQLKPCKCGYEICVWCWHHILDMAEKDDTEGRCPACRSPYDKEKIVGMAANCERLVAEVHMEXXXXXXXXXXXXXEARKQLSSVRVIQRNLVYIVGLPLNLADEDLLQQREYFGQYGKVLKVSMSRTAAGVVQQFPNSTCSVYITYSKEEEAIRCIKNVHGFVLEGRPLRACFGTTKYCHAWLRNMPCSNPDCLYLHEIGSQEDSFTKDEIISA----YTRSRVQQITGA-ANNMQRRTGDV 771
CPLC E +++ D PC CGY+IC +CWH I + D G CPACR PY ++ V + E L + EKK K + K K SE RK L+SVRV+Q+NLV++VGL LAD ++L++ EYFG++GK+ KV ++ + + Q P + S Y+TY + E+A+R I+ V+ V++GR L+A GTTKYC +L+NM C PDC+YLHE+G + SFTK+E+ + Y + +Q++ N +Q TG V
Sbjct: 14 CPLCMEPLEIDDINFFPCTCGYQICRFCWHRI-----RTDENGLCPACRKPYPEDPAVYKPLSQEEL-QRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGP--SASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSV 259
BLAST of Vigun05g252000.1 vs. DB:Swiss
Match: NOT4_YEAST (General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT2 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.287e-50 Identity = 102/263 (38.78%), Postives = 155/263 (58.94%), Query Frame = 1
Query: 1 MSDEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHILDMAEKDDTEGRCPACRSPYDKEKIVGMAANCERL------VAEVHMEXXXXXXXXXXXXXEARKQLSSVRVIQRNLVYIVGLPLNLADEDL---LQQREYFGQYGKVLKVSMSR--------TAAGVVQQFPNSTCSVYITYSKEEEAIRCIKNVHGFVLEGRPLRACFGTTKYCHAWLRNMPCSNPDCLYLHEIGSQEDSFTKDEIISAYTRSRVQQITGA 738
+S++ E CPLC E MD+TD+ PC CGY+IC +C+++I E + GRCPACR YD E + + + E L +A E+K + ++ K RK LS RVIQ+NLVY+VG+ + E++ L+ +YFGQYGK+ K+ ++R T+ P VYIT+ +++A RCI V G ++GR ++A +GTTKYC ++LR +PC NP+C++LHE G + DSF K E+ + + + QQ +G
Sbjct: 25 LSEDEEDYCPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELN---GRCPACRRKYDDENVRYVTLSPEELKMERAKLARKEKERKHREKERKENEYTNRKHLSGTRVIQKNLVYVVGINPPVPYEEVAPTLKSEKYFGQYGKINKIVVNRKTPHSNNTTSEHYHHHSPG--YGVYITFGSKDDAARCIAQVDGTYMDGRLIKAAYGTTKYCSSYLRGLPCPNPNCMFLHEPGEEADSFNKREL---HNKQQAQQQSGG 279
BLAST of Vigun05g252000.1 vs. DB:Swiss
Match: YAC4_SCHPO (Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.04c PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.878e-49 Identity = 103/236 (43.64%), Postives = 153/236 (64.83%), Query Frame = 1
Query: 7 DEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHILDMAEKDDTEGRCPACRSPYDKEKIVGMAANCERLVAEVHMEXXXXXXXXXXXXXEA--RKQLSSVRVIQRNLVYIVGLPLNLADED---LLQQREYFGQYGKVLKVSMSRTAAGVVQQFPNSTCSVYITYSKEEEAIRCIKNVHGFVLEGRPLRACFGTTKYCHAWLRNMPCSNPDCLYLHEIGSQEDSFTKDEIIS 699
DE + CPLC EE+D++D+ KPC+CGY +C +CWHHI K+D GRCPACR Y +E + E ++H + + K ++ + K E RK L+++RV+Q+NL Y+ GL +A+E+ +L+ EYFGQYGK++K+++++ AA N VYITY ++E+A R I + G V +GR LRA +GTTKYC ++LRN C NP C+YLHE G + DS+TK+++ S
Sbjct: 12 DEDDMCCPLCMEEIDISDKNFKPCQCGYRVCRFCWHHI-----KEDLNGRCPACRRLYTEENVQWRPVTAEEWKMDLHRKNERKKREKERKEVELSNRKHLANIRVVQKNLAYVNGLSPKVANEENINVLKGPEYFGQYGKIIKIAINKKAAANSA---NGHVGVYITYQRKEDAARAIAAIDGSVSDGRHLRASYGTTKYCTSYLRNQQCPNPSCMYLHEPGDEVDSYTKEDLAS 239
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR003954 | RNA recognition motif domain, eukaryote | SMART | SM00361 | rrm2_1 | coord: 111..192 e-value: 1.3E-12 score: 57.9 |
IPR000504 | RNA recognition motif domain | SMART | SM00360 | rrm1_1 | coord: 111..192 e-value: 0.0036 score: 26.5 |
IPR000504 | RNA recognition motif domain | PFAM | PF00076 | RRM_1 | coord: 112..190 e-value: 1.7E-6 score: 27.8 |
IPR000504 | RNA recognition motif domain | PROSITE | PS50102 | RRM | coord: 110..196 score: 10.838 |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | GENE3D | 3.30.70.330 | | coord: 111..192 e-value: 1.2E-24 score: 88.0 |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 1..76 e-value: 4.8E-21 score: 75.8 |
None | No IPR available | PFAM | PF14570 | zf-RING_4 | coord: 9..61 e-value: 5.4E-21 score: 74.1 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 804..831 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 377..398 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 350..398 |
None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 3..66 |
IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 9..57 score: 9.671 |
IPR034261 | CNOT4, RNA recognition motif | CDD | cd12438 | RRM_CNOT4 | coord: 105..204 e-value: 1.65948E-50 score: 170.798 |
IPR039515 | NOT4, modified RING finger, HC subclass (C4C4-type) | CDD | cd16618 | mRING-HC-C4C4_CNOT4 | coord: 9..58 e-value: 7.55277E-23 score: 89.9812 |
IPR035979 | RNA-binding domain superfamily | SUPERFAMILY | 54928 | RNA-binding domain, RBD | coord: 104..190 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g252000.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g252000.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g252000.1; organism=Vigna unguiculata; type=mRNA; length=5384bp GGCAGGAAAGGGAACTGGAAATGGAATACTTGGAACAACAGGAACGCAGG AGAGAGAGGAAAAAGCCAAAAAGGCCCATCCAAACAAAGCCTTATTCTCT CTCTTTTTAAAAGACACTTGTGGTTTTCTTTACACTTTGCTCTCGCTCTT GCTCTCTCACCCTGCGTTATCGTTCGTGCGTGCGCTTCTCGAACAATCTC CTCTTACCGATCTCATCACTGGAAATCATGAGTGACGAAGGAGAAAGGAC TTGTCCTCTCTGTGCAGAAGAGATGGATTTGACTGATCAGCAATTGAAAC CATGCAAATGTGGTTATGAGATATGTGTCTGGTGTTGGCATCACATACTG GATATGGCTGAGAAGGATGACACAGAGGGACGATGCCCTGCGTGTCGTTC TCCGTATGATAAGGAAAAGATTGTTGGGATGGCTGCAAACTGTGAGAGAC TGGTGGCTGAAGTTCATATGGAAAAAAAGATGAAAAACCAGAAAGCAAAG TCTAAATCATCTGAAGCACGGAAGCAGCTCAGTAGTGTGCGAGTAATTCA GCGGAACCTTGTTTACATAGTGGGCTTGCCTCTCAATCTGGCTGATGAAG ATCTTCTCCAGCAGCGAGAATATTTTGGTCAGTATGGGAAGGTCTTAAAA GTCTCGATGTCTCGTACAGCTGCTGGTGTTGTTCAGCAGTTTCCAAATAG TACATGCAGTGTATATATTACTTATTCAAAGGAAGAAGAAGCAATTCGAT GCATTAAAAATGTACATGGATTCGTTTTGGAGGGTAGACCTTTAAGGGCT TGCTTTGGAACCACTAAATATTGTCATGCATGGCTCAGAAACATGCCTTG CAGCAATCCGGATTGTCTATATCTGCATGAGATTGGCTCTCAAGAGGATA GTTTCACTAAAGATGAAATAATTTCAGCATACACTAGAAGTCGTGTTCAA CAAATTACTGGTGCTGCTAACAACATGCAACGTCGCACTGGTGATGTGTT GCCACCTCCCTTGGATGATTGCACAGATACTTCATCAGGGAAACCAACTG TGAACAATGTGACCACGGTTAGCATTGTTAAAGGTTCACCTCCTAATGGG AGTTCTGGGAGACCTATATCTCTTTCTGCTGCTGCATGGGGTACGCGGGC TACAAATTGTCAGCCAGCTGCTGGTGGTTTATTATGTGCAAATGGATTGT CCAGGCCTAAACCTGATACAATCAACAACACACTACCCATTTTGTCTGCT GTTGAGGCTTCCTTAAATGGTGATGTGACAAAGAGACCACCGTCAAGTGA TGGGAGTCATAGCATCACTGTCGGGGTAAAAGATGAATTATTGAAACCTG ATAAACAATATAGTAGCATGGATAACAATTCTAGAGCTGGTGAAAGAACT TCAGCTTCTGATGTTCGTTTTTCACCTATGAAATTGAACAACCAGTTGTC TTCTCTACCATTACCCAAAGATGGTGATAGAGGCAGTTGTACTGCTATGA ATGCACCAAATTCTATTGATATTACTGGACAATCATGCAGCTTTGGTTCT GAGGAAGCAATTATTTCTACCAGTGAAGAAACTGATAATTTGTCTTGTAA TTTGTCTTCTATTTACATTGATAGAAACTCCGCAAATGATAACTACAGTC AACCCAAACCTATCAGCTCATGTGATAACATGTCGGCTAAACCAATTGAA TCTCATGAATCACAGTATAATTCTGACAAACATAGAGATGTCATGATTAC AAATGCAGACACTAAAGCTGCTGCAATAGATAATGAGGTTTGTAATGTAA AGGAATTATGTGATTTGTCAGTGGTTTCTCAATCTCAAGTACTATCAGTT AATACTGAAGTGGAAGATGACGTAACAACTTTTGATAATCAAAGACTTAA GGATCCAGAAGTTGTTTCTTCATATTTGCCAAAATCAACCAGTTTTCGTC ATGTCCCAAATCATTCTCATCCACATCTCCTGCAGCATGGTGAATCATGC AATGTTGTAAATGCTGGTTCTTTAGATGCCAATTATGAAGTTGGGGATGA CTCACTATTACATGCAAATAACATATTATGCAACGGATATTCTGAGAAAT CAATGAGCTCTAGTTCTTATGGTTTCCTCCAAGATGAAAGGAATGAACAA CATATTGGAAGTTTATTCAGTGAAACGGTTAGTATCGGAAGTGATGCTGT CATGGACAAGGGTGAGAATAGTATAATTTCAAATATTTTGTCCATGGAGT TTGACGCCTGGGGTGACTCGGTAACATCACCTCAAAGTTTGGCCAAGTTG TTGGGTGACAAAACGGACAAGCAGAATGGCTCACTAAAAAAATGTAGTTC TTGGAAAATTCAAAGTAACAATCAGTCCAGATTTTCTTTTGCAAGACAGG AGGAATCCAAAATCCAAGCCAATGTACATGCATCTTCTGGTGCCATTCAA CAATATCCAAGCAAGGGCTCACTACATGATTTCGTGGAAAGAGACTTTTC TTTGGACAAGCTAGGTATCACAAATGGCTTCCCCTCCAATAACCTCGAAG AATCTGGAAATCTTGGCAGTGGTCAATTTTTTCCTTCAAACAATAAGCTT TCTGCTGTTTCAAGAGCACAAATTTCTGTACCACCAGGATTTTCTGTACC AAACAGGGCACCACCTCCTGGTTTCTCTTCTCTTGAGAGAACGGGGCACG CTTTTGACTCTGTTTCTGGGAATTCGTTGCGTGACCCTTCTTTCTTACTG CGAAATTCATATCAAACACCCTCAAATGGAAATATCGGTGGTCCAGGAGA CATTGAATTTATGGATCCTGCTATTTTGGCAGTTGGTAAAGGGAGAATTC AAGGTGCACGAAATAGCCCATTGCTGGACATGCGGTCCAATTACCCCGAA CAGTTAAATTATTTGGAAAATGAGGCTAGAGTTCAATTATTGATGCAAAG ATCTCTATCACCACAGCAAAACCTTCGATTTTCTGATATTGGGAATTCCT TTTCTCAGTTTGGTGATTCCTATGGCATCTCTTCTAGGTTAAATCAATCA CAAGTCAGTAATCTGGCTCCATTTCCTCAGTTGTCTCTTCAGCAGTCTAG AAATGCAGTCTTGTCAAATGGTCAATTGGATGGATGGAACGAAGTGCAGA CCGGAAATAGTTTGGGTGTGGCCGAGCTTTTAAGAAATGAAAGACTTGGA TTTAACAAGTTTTATAGAGGATACGATGAACCAAAATATCGGATACCTAA TTCTAGGGATCTGTACAACAGAACATTTGGGATTTGAAATTATTGGACAT ATTGACCATGGTAAAGCAAAGTCAGAATTAGACAAACAGAATTTTTCTGC ATTGCCGAAGGTGATGAGGCAGGCTCATGACATAAATTGTCTACTGGGCT TCCAGATGATTAAACTATGGAGAAGTGCGGTTATAGCTGCAGCTGTTCTT GATTTGTGGAAGCAAAGTTGGGTTGAGATTAAGAAATCAATCATGATGGA TCGGAACGTGATATATTTGGCAGGTAGATCTTAGTTGAGTGTTTTCTCTC TTGGTACAGAGCATGGAAATCTGTTGATTGACTATCAAATAATTTCTCTC GTATATTTATTGATAATGTAATTTTTTCTTTTACTGATATTGTGGatata tatatatatatatatatatataGAGGTTTGATGAGAATAATTCAATGGAA ATAATTTTGGCAGTGGCTTTTTGTCTTGGTGCGGTGTTTAAATTTTTTTA TGTTTGGTATTAAACCCTTATTAATTTGAAAAATCTCTTATATGCATAAC ACCGACTGTTGCTTTGTTCTTTATGCATAATTTTTGTAATGGCATTTTAT TATGTATATACATAACAAAACAGTACTAAGAGTTTGGTATTTTAAGTTAT ATATACACATGAATTACCTGCGCTAATTACCTTGTTTTGATTTGTTTATC TGGCATCTTGCTGTCTTTTGATCTTGTAACTGGTTATCAGGCTATATATA ACAGCATGGCTGGAGTGTGACATGCCATTGATGAATGACATTTTACATGT TTCTGTTAATGCAAGTCAGGGTTTTTACTTTTTGTTTCTACTGTGTATTT ACGTGAGTATAGCAATACATATTTTCTGAAGGCTTGATTTTGGGTGATTA ACGTGTTAGGTTATATTTGTTTGAACTTTTGTTTACTTTTACAGACTAGT ACAAACTCACGGATCGAGGAACGAGTATATTTCTTACAACGTTTTTGGTT CGTTTATTTAAATAAGCAAATTTCACTTTCTCGGGCATAGATTACACTAA GTTGCAATAATATGGTAGGATATGGTGCTATTGGTGTGAAATAATAAAAT CATGTTTTGGAGGTAATTGAATGGGTCTTCGGTGGCAGTGACAACTCTTA TATTTAGTGATACCCCATTAATCCAAAATACTCCAAGCCACAATGTATGC TGGAAACAATTGCTCCATGCGGCTTTTTGTTTTTTGTGAAGAAGTCTATT CTTTTTGGCGAATCAGTACAACATTTGTCTTTGACAACTAAGTTAATTAT CCTGTGTAGTTTCCACTCAAGTATGAGATCTCGGTATTCTGTGTGGATGT ACCTGAAAGGGTATTTCTTCCGATACCTCATTATTTTTTTCTAGAATAAA GCGGTAAGGATCAATCACCTATTGGTGAACATGATTGTCACATTCTGCCA GAAGTTCTAGTCCTCCAGCTACTTTCTTGAATAAATAGAAATAATTTGTT CCCGTGAACACTGTAGCTGGCTGCTGCTTCTATGATCCGGCATTAAAATG CTAGTAGTAATTTATCTATACATTATTTGTTGATTGTCACTCGGAAATAT AAGCTAAACAAAATTATGTTTTCAATATGCAAGTGATTTTTTAAATGCCT GACCAACGTCAGTGCGAAGTGATGAATGGAAATTTGTAATATTTGCTTTT TGTGTAAAAATTTGCATGGAAGATTATGCATATTATAATATGGTTTTACC ATTTTGATTGTAAAAAGTTATAGTGCAGAAAATTGTAATATTTGTTTAAG AGGAAAGCAAAGGAAATTTAAATTCACATTTCTTACTGAGTGATAAGTag atatgaaaagaaaacaaaagaaaaAGGGCCGAGAGGAGAAATTTCTGGTT AAATATCATTGTGGTTGAAAACTTCACAACTATTTATTTTCATATAAGAT TAGTAAGCGCAACATTAGAGAACCCAAAATATTGTCCGAGAAGAGCTAAA ATTTTCAGTCTATCATCGGCTAAATACCCgggtggcaaaaaagttgagtc taatgagttagttcataagctcgtttgaaaagagtcgattccgattgaaa atttaaatccttcagcttattttggtccagttcg back to topprotein sequence of Vigun05g252000.1_Vu_IT97K-499-35_v1.1 >Vigun05g252000.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g252000.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g252000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=1020bp MSDEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHILDMAEKDDTE GRCPACRSPYDKEKIVGMAANCERLVAEVHMEKKMKNQKAKSKSSEARKQ LSSVRVIQRNLVYIVGLPLNLADEDLLQQREYFGQYGKVLKVSMSRTAAG VVQQFPNSTCSVYITYSKEEEAIRCIKNVHGFVLEGRPLRACFGTTKYCH AWLRNMPCSNPDCLYLHEIGSQEDSFTKDEIISAYTRSRVQQITGAANNM QRRTGDVLPPPLDDCTDTSSGKPTVNNVTTVSIVKGSPPNGSSGRPISLS AAAWGTRATNCQPAAGGLLCANGLSRPKPDTINNTLPILSAVEASLNGDV TKRPPSSDGSHSITVGVKDELLKPDKQYSSMDNNSRAGERTSASDVRFSP MKLNNQLSSLPLPKDGDRGSCTAMNAPNSIDITGQSCSFGSEEAIISTSE ETDNLSCNLSSIYIDRNSANDNYSQPKPISSCDNMSAKPIESHESQYNSD KHRDVMITNADTKAAAIDNEVCNVKELCDLSVVSQSQVLSVNTEVEDDVT TFDNQRLKDPEVVSSYLPKSTSFRHVPNHSHPHLLQHGESCNVVNAGSLD ANYEVGDDSLLHANNILCNGYSEKSMSSSSYGFLQDERNEQHIGSLFSET VSIGSDAVMDKGENSIISNILSMEFDAWGDSVTSPQSLAKLLGDKTDKQN GSLKKCSSWKIQSNNQSRFSFARQEESKIQANVHASSGAIQQYPSKGSLH DFVERDFSLDKLGITNGFPSNNLEESGNLGSGQFFPSNNKLSAVSRAQIS VPPGFSVPNRAPPPGFSSLERTGHAFDSVSGNSLRDPSFLLRNSYQTPSN GNIGGPGDIEFMDPAILAVGKGRIQGARNSPLLDMRSNYPEQLNYLENEA RVQLLMQRSLSPQQNLRFSDIGNSFSQFGDSYGISSRLNQSQVSNLAPFP QLSLQQSRNAVLSNGQLDGWNEVQTGNSLGVAELLRNERLGFNKFYRGYD EPKYRIPNSRDLYNRTFGI* back to topmRNA from alignment at Vu05:44640327..44651387+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Vigun05g252000.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g252000.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g252000.1; organism=Vigna unguiculata; type=mRNA; length=11061bp; location=Sequence derived from: Vu05:44640327..44651387+ (Vigna unguiculata GGCAGGAAAGGGAACTGGAAATGGAATACTTGGAACAACAGGAACGCAGG
AGAGAGAGGAAAAAGCCAAAAAGGCCCATCCAAACAAAGCCTTATTCTCT
CTCTTTTTAAAAGACACTTGTGGTTTTCTTTACACTTTGCTCTCGCTCTT
GCTCTCTCACCCTGCGTTATCGTTCGTGCGTGCGCTTCTCGAACAATCTC
CTCTTACCGATCTCATCACTGTAAGCTATGGACTTCCAATCCATCGCCCT
AATTTCTTGATCGAATTCTACAATCAATTATTGTATAGATCCCTAATGCA
TTTGCGGATTATGTTTTGCTATTGATTTCGCGGATCATTGCTGTTGGCCG
TCAATCTATCATCTCTCTGCTGTTTTTCAATTTTTAAATTCATAATTTCT
CTTTGTATTTGGCTTTCGGATTTGTTCGGATTTCGATTTTGTTAGCTTTG
AACAATTGTGATTAGGTCTTCTATTGTCAATTATTCCCTTTCTGTCTGTC
TAATTTTTTGTTCCTATTAGTGTTTGGCTGATGTTAGGTTTCTCAGCTGT
GTACTTCAATCTGCTTGTTTATTTTATTTGGATTTATGTATAAGAATTAA
AGCTGTGTTTTATGATTGTAGTTCACTTTCCTTGTGCCATCGATATTTGT
ATTTCTAAATTTTCATGTTATCAAATGCTCAACATTTTTTATGATATCTA
TTTTTTCATAGTATCTTAAAGTGACTATGTAACAGTGCTAAGCGTTGTTA
TTATGTTGTTGGGTAAAGGGATTGATGATAAGTTGCACCATCATAGTTTT
TGTTGAGTTCCTGAGGCAAAATAGTATTTAGTTTACTGAAAGTAGGCTTT
CCTGCATTTTTTAAGCACATCTCTTGGAAGATTTCTGATTCAAGTTTGAT
CTGCATTGTTTGCAATATCCTGGTGTTTGTTTGACTGTTGACAATGATTT
GTGTTTCTCAGTTTGCTGAATTTTTATCCAGGGAAATCATGAGTGACGAA
GGAGAAAGGACTTGTCCTCTCTGTGCAGAAGAGATGGATTTGACTGATCA
GCAATTGAAACCATGCAAATGTGGTTATGAGGTTCGATTCTATTACTATG
ATTTTGTCATTAGACAATAATCTGTAGGTTTTTATATAATATCATGTGTT
CATTAGAAGAATTATTTAATTTCTTTGTTAATCTGGTCACTATTTATTTT
TGAATATATATTTTACTCTCTTTTCATCTTTTAACATTCGGCATTATTGT
TCTTCTCCTCCTGATTTGAGTACACCATCACCATCTGTTGCTGATTATTG
CTTATTTACTAAATACTGTGGGTTTCTCTCTAACTATTATTGTATCAATG
ATTTTATTTTTTTCTGTTTAGAATAAAATGCCACTCATTTCTTGTATACC
AACATGTATTTAAGACACTGGCTCCGTTGTTTACTTTTGATTTTCCAGTT
GAAATTTTTATACCTGACAGTAATGGTGAATAATGTCTTTTAATCTACAC
TTGACCGTAGATATGTGTCTGGTGTTGGCATCACATACTGGATATGGCTG
AGAAGGATGACACAGAGGGACGATGCCCTGCGTGTCGTTCTCCGTATGAT
AAGGAAAAGATTGTTGGGATGGCTGCAAACTGTGAGAGGTTATTCTGTTA
ACAGTACATTCTTATAGACTTGAAGTGTTGTACTGCTTTCATAAGCCCTT
TTTTCCTTTTTTGTTAAGCATGCGGGCATTTGCATAACCATTCCAACACT
CTAAATAAGCTATCTCTTTAATATTATGCTATATATTACGCAATATACAA
TACATTCCAGTTATCTTTTGTCTTTATGATCGAACAAAAGAAAGTTCCAG
TTGTAAGAATTTTGTTCACAATTTTCTGCCTTACTACCTAGAAACTTGTT
TAAGGTACCAAACTTGGCCATCTTGTTGAGTTTCTCTTGTTAATTAATTC
TTTGCTTAGACTGGTGGCTGAAGTTCATATGGAAAAAAAGATGAAAAACC
AGAAAGCAAAGTCTAAATCATCTGAAGCACGGAAGCAGCTCAGTAGTGTG
CGAGTAATTCAGCGGAACCTTGTTTACATAGTGGGCTTGCCTCTCAATCT
GGCTGATGAAGATGTAAAATTTTTCCTCATGTTTTAAATAGTTGCTATCT
TGTGTATCTGTTTTGCTTTTTGGCTACCTTCCCCTCTCCTTTTCAATTTT
TCTTATTCTATGTGTAAGTTTACTAATATTTTATCAATGTGCAGCTTCTC
CAGCAGCGAGAATATTTTGGTCAGTATGGGAAGGTCTTAAAAGTCTCGAT
GTCTCGTACAGCTGCTGGTGTTGTTCAGCAGTTTCCAAATAGTACATGCA
GTGTGTAAGTTTATGCTGTCCTAAACTTTATAGTTTAGCTTTTTTTTCCT
TAGTGGTACTGTGCTGGATTATTAGTAGCAGCGGTGGTGACTGCCACTAG
TGGCATAGAGCAGAATGACTCACGGATAATCCTAAATGTTTGTAGTGAAG
CACTTTGCTGTTGTGGTCCGTAGTGGCCACTACTCTATTAGGAGTCATAT
TCCTTGTTTCAACCTCTTTAAGATTCACCAGAACGTAATAGTCTTCCCAA
GTTTGACATTAAAAACCTCATTTAGAGATCTGAAATCACTTTGAACGTGC
ATCACACACCTATTTGACTAAGTTCTTGTACTCATATTTAAATAGTGTGC
AATTAATTAGACGCCCCCCCTGTGCTCCTCATTTATGCAGGTCTACCTGT
TTTATACCATCTGACTAGCCTCACTCTGTTCTCTGGCACCATCTCCATTA
TTTTCCGTACCTTCCTGTATTTCCGGCTTTATATGCTCTCTTGAACCATC
TTTGACATTATGCTCCTTTGTTGTTTACTCAGTTCTCTCTCTGTTCCCTG
TTCTCTCTTATTGTTTGGTTGCTGTAATGTTCTCTCTCACTGGTCATTCA
AGATTTCTTCTCTGTTCTCTATTAGCAGCATGTGAATGACTCTCATTTTT
GGCGTTTTCTTTTTCATTTATATTTGAGCGTGTGTATGTGTGCATCATAA
GAATAACAACCATCCTGTGATAGCCATTTTGGGGTTGGCTCCTCTGTGTT
GATTTATAGATTGATACTTTGGTACTCTTTGTTCTCTTTATTTTGTGTTA
TTGCTAATTTTCCATTGACTTCTTCTGGTTGCATGTATTTGTGATCTATT
TTTTTCTCTTATCTTTTAATAATATAAATTTTTAAAATAATACGATTATT
GATTAAATTATTTTTGAAGTTTTCCATTGCAATGGCTTCCTTCTGTTGTT
GTCACTCCTCACTACGCTATTCCACCATAGCTTTTTGGAGGGTGACCACT
ATGCACCCCTTCCTGTCATAGTCTGCCTTGTTATTTTGGTTTTTAACTGG
CTAGCTTCTCATTTTGATTTCTATCGTAAATGCTAGGTAGACCTTTTACT
TTTTCTGGTTTCTTGTCATCCAGACAAACTGGATGTTATTGGTGTATGCA
TTTTTTTTTCTTTCTCTTTTTGATATTTCTCTTTTGTTAGTACTGGATGG
AAGGAAATGACCAGCAAAAGGACTGCACCAAAGCAATTTCTTTTCTTGGA
AATGAAATAGAAAAGCCCATTTACCTTTTTTGGAAAAGTCCTTTTACCTT
CTAAGCGCATGCTTTAATTTAAAGAAGACCAAAAAGGGATTTATGGCTTT
CACCCTCTCCATGATATTCCCTGTTGCGTCTGCTTGCTTACCTTTATAAA
CGAAAATATAGCAGTTCCTGAAAGATTTTTTGCCCCCAGATATATTACTT
ATTCAAAGGAAGAAGAAGCAATTCGATGCATTAAAAATGTACATGGATTC
GTTTTGGAGGGTAGACCTTTAAGGTATCTATATCTGGATTTATTGAAGCT
ATTCATGTATGGATGACTTGCCTATGATAGTCTAATTCGCTGTATTTTTT
GTTTTGTACATCTGCAGGGCTTGCTTTGGAACCACTAAATATTGTCATGC
ATGGCTCAGAAACATGGTATGAAAATTACTAATTCCTCAGATTTTAACTT
TTACAGTCGATGATGGTTAAGCTTGACTGGAGATAGATGTTCATGAACAG
CCTTGCAGCAATCCGGATTGTCTATATCTGCATGAGATTGGCTCTCAAGA
GGATAGTTTCACTAAAGATGAAATAATTTCAGCATACACTAGGTATTTTT
CTTGAATGAATTTTAAAGCAAGACTTATTATGAATGTGTTGAATGATAGA
ATCTATTGTTTATACGATCCCATTATGATTAGATGAAGGATGGTGCTTTA
TCCTTTTCTGGTTAAGAAGAATGTTTTATTTCCTGGTCATATTACTTTTA
AGTTTTAAATTGACATTGGTATATCTGTCAAACCTTTTATGGTACCACAT
ATATGAACATCATAGCTAAAACTTTTATTTGCTTAAGCTTTTCTATAATA
TTATGTTGAATCATCTAAATGTTTATAAATCTTACTGCCCAACACTCCTA
GAAAATCAAGGAAGTAATGAATCATAAAACCAATCCTTGAATTAATTGAA
ACTCCTCATGTATAGCAATCTCTTATTTCAGTGGCCATTGGCAAGGTTTT
TATTTTTGCGGTAAATTAAAAGCTTCGTGTATTTTCTATATTGATTCAGA
ACGGATTCACTTAAGAGTTGATACAAACCAGGCCATCCATTTTTTTCTCT
GTTCTATATTTCCTTTTTACCTTTTGTTATCAAAATCATGTGACCTTGGT
CAAAGGATTGAATCTGTTCATAGTACTCATTGAATTCTAGGTTGCTCTAG
TATATTACATTACATATAAAGGTTTCATTTGCTTTTTGACATTATAATTC
ATCCTGTTTATCCTTTTACAATTATTCATTAATTATTCATTATAAATAAA
TAGATATTTTTAAATTTATAAATAATATTATATTAAAAATCATAATATAT
ATATATATATATATATATATATATATTTAAAATGTAAGTTATGTTTTGGA
GTTGTAATAAATATTTATCAATATACGGTTGTTTTTAAATTGGCATTGAT
ATGTAGTTAAGAAAATTAAGTATACATTTAAAATATAAACAGTTTAGTTT
GAAACGATTGAGAATTTTTTTTGGCTTGTTGCCGAAGTGAAATGCACCTC
CCAAAGTGAGAAGAGTGTTGAGAATTTCTTATAGAGAGAGTTAGCGCTTG
GAACTCCAAGTTATAAATATAACAGTAGTTGTAGATGAATTCAAATAAGG
GTATCCCAATTGGTGAGTCAAATTAAATTTCCTAGTTTGTCTTTGTTTGC
AAACTATATATGCTTGCAATTGCATCCAGTGCTTTTCATTCAATGGTTTA
GTCACTTGCTCTCTTGTTTTGAAGAAGTCGTGTTCAACAAATTACTGGTG
CTGCTAACAACATGCAACGTCGCACTGGTGATGTGTTGCCACCTCCCTTG
GATGATTGCACAGATACTTCATCAGGGAAACCAACTGTGAACAATGTGGT
AGGATTTTCTTCATGCTTTCCTTAATTATTGCTTTGTTATATGACCTCAT
TTTTTTGGCGTGTATCTTTATTTTTGTGCTAGTTTGATATTTAGTTGCTT
TAACTCCCATTTACTATAGGTTCTAACATTCTGTTTTTTATCATGGAGCA
GACCACGGTTAGCATTGTTAAAGGTTCACCTCCTAATGGGAGTTCTGGGA
GACCTATATCTCTTTCTGCTGCTGCATGGTAATGCATATTTTCTTGTATT
CTGCAGTGAAGGTTAAAATAATTTAAATTTATAATTTTAAAAATTTCAAC
TAATGTGTTTGCTAGGGGTACGCGGGCTACAAATTGTCAGCCAGCTGCTG
GTGGTTTATTATGTGCAAATGGATTGTCCAGGCCTAAACCTGATACAATC
AACAACACACTACCCATTTTGTCTGCTGTTGAGGCTTCCTTAAATGGTGA
TGTGACAAAGAGACCACCGTCAAGTGATGGGAGTCATAGCATCACTGTCG
GGGTAAAAGATGAATTATTGAAACCTGATAAACAATATAGTAGCATGGAT
AACAATTCTAGAGCTGGTGAAAGAACTTCAGCTTCTGATGTTCGTTTTTC
ACCTATGAAATTGAACAACCAGTTGTCTTCTCTACCATTACCCAAAGATG
GTGATAGAGGCAGTTGTACTGCTATGAATGCACCAAATTCTATTGATATT
ACTGGACAATCATGCAGCTTTGGTTCTGAGGAAGCAATTATTTCTACCAG
TGAAGAAACTGATAATTTGTCTTGTAATTTGTCTTCTATTTACATTGATA
GAAACTCCGCAAATGATAACTACAGTCAACCCAAACCTATCAGCTCATGT
GATAACATGTCGGCTAAACCAATTGAATCTCATGAATCACAGTATAATTC
TGACAAACATAGAGATGTCATGATTACAAATGCAGACACTAAAGCTGCTG
CAATAGATAATGAGGTTTGTAATGTAAAGGAATTATGTGATTTGTCAGTG
GTTTCTCAATCTCAAGTACTATCAGTTAATACTGAAGTGGAAGATGACGT
AACAACTTTTGATAATCAAAGACTTAAGGATCCAGAAGTTGTTTCTTCAT
ATTTGCCAAAATCAACCAGTTTTCGTCATGTCCCAAATCATTCTCATCCA
CATCTCCTGCAGCATGGTGAATCATGCAATGTTGTAAATGCTGGTTCTTT
AGATGCCAATTATGAAGTTGGGGATGACTCACTATTACATGCAAATAACA
TATTATGCAACGGATATTCTGAGAAATCAATGAGCTCTAGTTCTTATGGT
TTCCTCCAAGATGAAAGGAATGAACAACATATTGGAAGTTTATTCAGTGA
AACGGTTAGTATCGGAAGTGATGCTGTCATGGACAAGGGTGAGAATAGTA
TAATTTCAAATATTTTGTCCATGGAGTTTGACGCCTGGGGTGACTCGGTA
ACATCACCTCAAAGTTTGGCCAAGTTGTTGGGTGACAAAACGGACAAGCA
GAATGGCTCACTAAAAAAATGTAGTTCTTGGAAAATTCAAAGTAACAATC
AGTCCAGATTTTCTTTTGCAAGACAGGAGGAATCCAAAATCCAAGCCAAT
GTACATGCATCTTCTGGTGCCATTCAACAATATCCAAGCAAGGGCTCACT
ACATGATTTCGTGGAAAGAGACTTTTCTTTGGACAAGCTAGGTATCACAA
ATGGCTTCCCCTCCAATAACCTCGAAGAATCTGGAAATCTTGGCAGTGGT
CAATTTTTTCCTTCAAACAATAAGCTTTCTGGTGGGTATTTATAGCTTAC
TTAAATCGGATACCCTAGGTTTTATAGCAACACTTCTTATCATTAGTTCT
TTTGCTGTTCGGTCATTGCCATACCTTTTATTGTGCCATTATTGTTTGTA
GATTCTTGTTGAGTAAACTGTATATTTCGAAAAACATCTTACTTTTGATA
GGATTTGCCAGAACTACCTAGAAGCATTCAGCACAAAAAATTTCAATATT
ATATTTGTGTACATTAAAAGAATTGAGTTTTCATTAGGGTTGGTAAATGA
ACGATTTATTATAATGTACACTTGTATTGCCGTTGCTTAAGTATACTTAT
ATCATCCGAAACCTTCCTGACAGGTCAACTGTTCAGGTATAGTTGATTTT
TGTTTGCTAATTTTGATCGAGTTATGTAACCAAGTTTAAAGTGCAGTGAC
TGCTTTTAGTATCTTATTTTTTTGTATAGATATGTAACGACATTTCTTTA
TCATATTTTTCAGCTGTTTCAAGAGCACAAATTTCTGTACCACCAGGATT
TTCTGTACCAAACAGGGCACCACCTCCTGGTTTCTCTTCTCTTGAGAGAA
CGGGGCACGCTTTTGACTCTGTTTCTGGTTAGTTCTTGTTTTGTTCTACT
TTTTCATGTCTTTCTAGATATTTTGGTTTAATATCATTGTTATCACTTTG
ACAGGGAATTCGTTGCGTGACCCTTCTTTCTTACTGCGAAATTCATATCA
AACACCCTCAAATGGAAATATCGGTGGTCCAGGAGACATTGAATTTATGG
ATCCTGCTATTTTGGCAGTTGGTAAAGGGAGAATTCAAGGTGCACGAAAT
AGCCCATTGCTGGACATGCGGTCCAATTACCCCGAACAGTTAAATTATTT
GGAAAATGAGGCTAGAGTTCAATTATTGATGCAAAGATCTCTATCACCAC
AGCAAAACCTTCGATTTTCTGATATTGGGAATTCCTTTTCTCAGTTTGGT
GATTCCTATGGCATCTCTTCTAGGTTAAATCAATCACAAGTCAGTAATCT
GGCTCCATTTCCTCAGTTGTCTCTTCAGCAGTCTAGAAATGCAGTCTTGT
CAAATGGTCAATTGGATGGATGGAACGAAGTGCAGACCGGAAATAGTTTG
GGTGTGGCCGAGCTTTTAAGAAATGAAAGACTTGGATTTAACAAGTTTTA
TAGAGGATACGATGAACCAAAATATCGGATACCTAATTCTAGGGATCTGT
ACAACAGAACATTTGGGATTTGAAATTATTGGACATATTGACCATGGTAA
AGCAAAGTCAGAATTAGACAAACAGAATTTTTCTGCATTGCCGAAGGTGA
TGAGGCAGGCTCATGACATAAATTGTCTACTGGGCTTCCAGATGATTAAA
CTATGGAGAAGTGCGGTTATAGCTGCAGCTGGTAATCATTTAACCCAAAC
TTACCCTTTTCTTTACTTTTTTTGGTTTAATTCTTGATTCTAAACTTCCG
CTTACATCGGTTTTGTACATTATGCGTACAAGGTGCTAAACTAATTGTCC
TTTAAAACTAGATTTAAAAATATTGTGATTTTGGTACCAAATTTTAAGTA
AACTTTTCCATGAACGCTAATAAGGAGAAGAAAAAAAAATTCTTCATAAA
TTAAAATTGATTTGTAAAGTTAAAAAAACTGTTTAGGGAGAAATTGATAT
GAGAAAACTTGTATGCATTGACTTAGAGATAAACATAATTTTATCTTTTA
TACAAACTTATTTCATTTTTCCATATTTTCTTCCCCGATAAGTATTTATC
TCATCTTGTACGAATTGCTGTTGAGTTTTTGAAATGTACAACACTCAATA
TTTCTCCCTTTTTACTGTGTAGTTCTTGATTTGTGGAAGCAAAGTTGGGT
TGAGATTAAGAAATCAATCATGATGGATCGGAACGTGATATATTTGGCAG
GTAGATCTTAGTTGAGTGTTTTCTCTCTTGGTACAGAGCATGGAAATCTG
TTGATTGACTATCAAATAATTTCTCTCGTATATTTATTGATAATGTAATT
TTTTCTTTTACTGATATTGTGGATATATATATATATATATATATATATAG
AGGTTTGATGAGAATAATTCAATGGAAATAATTTTGGCAGTGGCTTTTTG
TCTTGGTGCGGTGTTTAAATTTTTTTATGTTTGGTATTAAACCCTTATTA
ATTTGAAAAATCTCTTATATGCATAACACCGACTGTTGCTTTGTTCTTTA
TGCATAATTTTTGTAATGGCATTTTATTATGTATATACATAACAAAACAG
TACTAAGAGTTTGGTATTTTAAGTTATATATACACATGAATTACCTGCGC
TAATTACCTTGTTTTGATTTGTTTATCTGGCATCTTGCTGTCTTTTGATC
TTGTAACTGGTTATCAGGCTATATATAACAGCATGGCTGGAGTGTGACAT
GCCATTGATGAATGACATTTTACATGTTTCTGTTAATGCAAGTCAGGGTT
TTTACTTTTTGTTTCTACTGTGTATTTACGTGAGTATAGCAATACATATT
TTCTGAAGGCTTGATTTTGGGTGATTAACGTGTTAGGTTATATTTGTTTG
AACTTTTGTTTACTTTTACAGACTAGTACAAACTCACGGATCGAGGAACG
AGTATATTTCTTACAACGTTTTTGGTTCGTTTATTTAAATAAGCAAATTT
CACTTTCTCGGGCATAGATTACACTAAGTTGCAATAATATGGTAGGATAT
GGTGCTATTGGTGTGAAATAATAAAATCATGTTTTGGAGGTAATTGAATG
GGTCTTCGGTGGCAGTGACAACTCTTATATTTAGTGATACCCCATTAATC
CAAAATACTCCAAGCCACAATGTATGCTGGAAACAATTGCTCCATGCGGC
TTTTTGTTTTTTGTGAAGAAGTCTATTCTTTTTGGCGAATCAGTACAACA
TTTGTCTTTGACAACTAAGTTAATTATCCTGTGTAGTTTCCACTCAAGTA
TGAGATCTCGGTATTCTGTGTGGATGTACCTGAAAGGGTATTTCTTCCGA
TACCTCATTATTTTTTTCTAGAATAAAGCGGTAAGGATCAATCACCTATT
GGTGAACATGATTGTCACATTCTGCCAGAAGTTCTAGTCCTCCAGCTACT
TTCTTGAATAAATAGAAATAATTTGTTCCCGTGAACACTGTAGCTGGCTG
CTGCTTCTATGATCCGGCATTAAAATGCTAGTAGTAATTTATCTATACAT
TATTTGTTGATTGTCACTCGGAAATATAAGCTAAACAAAATTATGTTTTC
AATATGCAAGTGATTTTTTAAATGCCTGACCAACGTCAGTGCGAAGTGAT
GAATGGAAATTTGTAATATTTGCTTTTTGTGTAAAAATTTGCATGGAAGA
TTATGCATATTATAATATGGTTTTACCATTTTGATTGTAAAAAGTTATAG
TGCAGAAAATTGTAATATTTGTTTAAGAGGAAAGCAAAGGAAATTTAAAT
TCACATTTCTTACTGAGTGATAAGTAGATATGAAAAGAAAACAAAAGAAA
AAGGGCCGAGAGGAGAAATTTCTGGTTAAATATCATTGTGGTTGAAAACT
TCACAACTATTTATTTTCATATAAGATTAGTAAGCGCAACATTAGAGAAC
CCAAAATATTGTCCGAGAAGAGCTAAAATTTTCAGTCTATCATCGGCTAA
ATACCCGGGTGGCAAAAAAGTTGAGTCTAATGAGTTAGTTCATAAGCTCG
TTTGAAAAGAGTCGATTCCGATTGAAAATTTAAATCCTTCAGCTTATTTT
GGTCCAGTTCG back to topCoding sequence (CDS) from alignment at Vu05:44640327..44651387+ >Vigun05g252000.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g252000.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g252000.1; organism=Vigna unguiculata; type=CDS; length=3060bp; location=Sequence derived from: Vu05:44640327..44651387+ (Vigna unguiculata ATGAGTGACGAAGGAGAAAGGACTTGTCCTCTCTGTGCAGAAGAGATGGA TTTGACTGATCAGCAATTGAAACCATGCAAATGTGGTTATGAGATATGTG TCTGGTGTTGGCATCACATACTGGATATGGCTGAGAAGGATGACACAGAG GGACGATGCCCTGCGTGTCGTTCTCCGTATGATAAGGAAAAGATTGTTGG GATGGCTGCAAACTGTGAGAGACTGGTGGCTGAAGTTCATATGGAAAAAA AGATGAAAAACCAGAAAGCAAAGTCTAAATCATCTGAAGCACGGAAGCAG CTCAGTAGTGTGCGAGTAATTCAGCGGAACCTTGTTTACATAGTGGGCTT GCCTCTCAATCTGGCTGATGAAGATCTTCTCCAGCAGCGAGAATATTTTG GTCAGTATGGGAAGGTCTTAAAAGTCTCGATGTCTCGTACAGCTGCTGGT GTTGTTCAGCAGTTTCCAAATAGTACATGCAGTGTATATATTACTTATTC AAAGGAAGAAGAAGCAATTCGATGCATTAAAAATGTACATGGATTCGTTT TGGAGGGTAGACCTTTAAGGGCTTGCTTTGGAACCACTAAATATTGTCAT GCATGGCTCAGAAACATGCCTTGCAGCAATCCGGATTGTCTATATCTGCA TGAGATTGGCTCTCAAGAGGATAGTTTCACTAAAGATGAAATAATTTCAG CATACACTAGAAGTCGTGTTCAACAAATTACTGGTGCTGCTAACAACATG CAACGTCGCACTGGTGATGTGTTGCCACCTCCCTTGGATGATTGCACAGA TACTTCATCAGGGAAACCAACTGTGAACAATGTGACCACGGTTAGCATTG TTAAAGGTTCACCTCCTAATGGGAGTTCTGGGAGACCTATATCTCTTTCT GCTGCTGCATGGGGTACGCGGGCTACAAATTGTCAGCCAGCTGCTGGTGG TTTATTATGTGCAAATGGATTGTCCAGGCCTAAACCTGATACAATCAACA ACACACTACCCATTTTGTCTGCTGTTGAGGCTTCCTTAAATGGTGATGTG ACAAAGAGACCACCGTCAAGTGATGGGAGTCATAGCATCACTGTCGGGGT AAAAGATGAATTATTGAAACCTGATAAACAATATAGTAGCATGGATAACA ATTCTAGAGCTGGTGAAAGAACTTCAGCTTCTGATGTTCGTTTTTCACCT ATGAAATTGAACAACCAGTTGTCTTCTCTACCATTACCCAAAGATGGTGA TAGAGGCAGTTGTACTGCTATGAATGCACCAAATTCTATTGATATTACTG GACAATCATGCAGCTTTGGTTCTGAGGAAGCAATTATTTCTACCAGTGAA GAAACTGATAATTTGTCTTGTAATTTGTCTTCTATTTACATTGATAGAAA CTCCGCAAATGATAACTACAGTCAACCCAAACCTATCAGCTCATGTGATA ACATGTCGGCTAAACCAATTGAATCTCATGAATCACAGTATAATTCTGAC AAACATAGAGATGTCATGATTACAAATGCAGACACTAAAGCTGCTGCAAT AGATAATGAGGTTTGTAATGTAAAGGAATTATGTGATTTGTCAGTGGTTT CTCAATCTCAAGTACTATCAGTTAATACTGAAGTGGAAGATGACGTAACA ACTTTTGATAATCAAAGACTTAAGGATCCAGAAGTTGTTTCTTCATATTT GCCAAAATCAACCAGTTTTCGTCATGTCCCAAATCATTCTCATCCACATC TCCTGCAGCATGGTGAATCATGCAATGTTGTAAATGCTGGTTCTTTAGAT GCCAATTATGAAGTTGGGGATGACTCACTATTACATGCAAATAACATATT ATGCAACGGATATTCTGAGAAATCAATGAGCTCTAGTTCTTATGGTTTCC TCCAAGATGAAAGGAATGAACAACATATTGGAAGTTTATTCAGTGAAACG GTTAGTATCGGAAGTGATGCTGTCATGGACAAGGGTGAGAATAGTATAAT TTCAAATATTTTGTCCATGGAGTTTGACGCCTGGGGTGACTCGGTAACAT CACCTCAAAGTTTGGCCAAGTTGTTGGGTGACAAAACGGACAAGCAGAAT GGCTCACTAAAAAAATGTAGTTCTTGGAAAATTCAAAGTAACAATCAGTC CAGATTTTCTTTTGCAAGACAGGAGGAATCCAAAATCCAAGCCAATGTAC ATGCATCTTCTGGTGCCATTCAACAATATCCAAGCAAGGGCTCACTACAT GATTTCGTGGAAAGAGACTTTTCTTTGGACAAGCTAGGTATCACAAATGG CTTCCCCTCCAATAACCTCGAAGAATCTGGAAATCTTGGCAGTGGTCAAT TTTTTCCTTCAAACAATAAGCTTTCTGCTGTTTCAAGAGCACAAATTTCT GTACCACCAGGATTTTCTGTACCAAACAGGGCACCACCTCCTGGTTTCTC TTCTCTTGAGAGAACGGGGCACGCTTTTGACTCTGTTTCTGGGAATTCGT TGCGTGACCCTTCTTTCTTACTGCGAAATTCATATCAAACACCCTCAAAT GGAAATATCGGTGGTCCAGGAGACATTGAATTTATGGATCCTGCTATTTT GGCAGTTGGTAAAGGGAGAATTCAAGGTGCACGAAATAGCCCATTGCTGG ACATGCGGTCCAATTACCCCGAACAGTTAAATTATTTGGAAAATGAGGCT AGAGTTCAATTATTGATGCAAAGATCTCTATCACCACAGCAAAACCTTCG ATTTTCTGATATTGGGAATTCCTTTTCTCAGTTTGGTGATTCCTATGGCA TCTCTTCTAGGTTAAATCAATCACAAGTCAGTAATCTGGCTCCATTTCCT CAGTTGTCTCTTCAGCAGTCTAGAAATGCAGTCTTGTCAAATGGTCAATT GGATGGATGGAACGAAGTGCAGACCGGAAATAGTTTGGGTGTGGCCGAGC TTTTAAGAAATGAAAGACTTGGATTTAACAAGTTTTATAGAGGATACGAT GAACCAAAATATCGGATACCTAATTCTAGGGATCTGTACAACAGAACATT TGGGATTTGA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003676 | nucleic acid binding |
|