Vigun05g254300.1

Transcript Overview
NameVigun05g254300.1
Unique NameVigun05g254300.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1098
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu05supercontigVu05:44894611..44895936 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL022Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL094Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL065Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL423Pisum sativum Cameor genome v1aPisum sativum
psvuL444Pisum sativum Cameor genome v1aPisum sativum
pvvuL033Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvuL792Pisum sativum Cameor genome v1aPisum sativum
pvvuL180Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL402Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL044Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0066Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0074Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0802Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL530Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0377Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0894Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1022Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0109Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0280Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0739Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0993Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1056Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1110Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL594Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR395Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR420Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuL218Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL110Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL305Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL246Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR247Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR261Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR275Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR283Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL044Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL498Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL059Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL515Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL039Cicer arietinum
carvuL488Cicer arietinum
ccavuL099Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL387Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR475Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR483Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR494Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR420Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR423Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL352Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL470Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL523Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL486Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL529Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL034Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL161Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL422Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR316Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR337Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.L003700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr05.913Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.model.Chr05.2395Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun05g254300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun05g254300Vigun05g254300_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g254300.1Vigun05g254300.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun05g254300.1_Vu_IT97K-499-35_v1.1Vigun05g254300.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g254300.1.v1.1.CDS.4Vigun05g254300.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun05g254300.1.v1.1.CDS.3Vigun05g254300.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun05g254300.1.v1.1.CDS.2Vigun05g254300.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun05g254300.1.v1.1.CDS.1Vigun05g254300.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g254300.1.v1.1.three_prime_UTR.1Vigun05g254300.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g254300.1.v1.1.five_prime_UTR.1Vigun05g254300.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL373_ARATH (60S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.868e-54
Identity = 79/95 (83.16%), Postives = 89/95 (93.68%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAATTV 285
            MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PR + +A++ 
Sbjct:    1 MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL372_ARATH (60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 8.982e-54
Identity = 79/95 (83.16%), Postives = 88/95 (92.63%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAATTV 285
            M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PR +G A++ 
Sbjct:    1 MTKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL371_ARATH (60S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.494e-53
Identity = 78/94 (82.98%), Postives = 88/94 (93.62%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAATT 282
            MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+ FREGT+A PR + AA++
Sbjct:    1 MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRNVPRRFKTCFREGTQATPRNKAAASS 94
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL371_DROME (Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37a PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.076e-40
Identity = 63/88 (71.59%), Postives = 74/88 (84.09%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRK 264
            M KGT SFGKR NKTHTLC RCGR S+H+QKS CA C +PAA+ R YNWSVKA RRKTTGTGRM++L+ V RRF++GFREGT+A P+K
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPKK 88
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL37A_YEAST (60S ribosomal protein L37-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL37A PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.024e-38
Identity = 59/84 (70.24%), Postives = 70/84 (83.33%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEA 252
            MGKGT SFGKR NK+HTLC RCGRRSFH+QK  C++C +PAA+TR YNW  KA RR TTGTGRMRYL+HV RRFK+GF+ G+ +
Sbjct:    1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPAAKTRSYNWGAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTGSAS 84
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL37B_YEAST (60S ribosomal protein L37-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL37B PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 5.254e-38
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAA 255
            MGKGT SFGKR NK+HTLC RCGRRSFH+QK  C++C +P+A+TR +NW+ KA RR TTGTGRMRYL+HV RRFK+GF+ G+  A
Sbjct:    1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTGSAKA 85
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL37_SPOFR (60S ribosomal protein L37 OS=Spodoptera frugiperda OX=7108 GN=RpL37 PE=3 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 1.952e-37
Identity = 62/93 (66.67%), Postives = 77/93 (82.80%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAAT 279
            M KGT SFGKRRNKTHTLC RCGR S+H+QKS+CA C +PAA+ R Y+WSVKA RRKTTGTGRMR+L+ V RRF++GF+EG +  P+K  A++
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRMRHLKIVRRRFRNGFKEG-KPTPKKAVASS 92
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL37_RAT (60S ribosomal protein L37 OS=Rattus norvegicus OX=10116 GN=Rpl37 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.158e-36
Identity = 60/88 (68.18%), Postives = 69/88 (78.41%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRK 264
            M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA R RKYNWS KA RR TTGTGRMR+L+ V RRF+ GFREGT   P++
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKR 88
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL37_MOUSE (60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=3 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 1.158e-36
Identity = 60/88 (68.18%), Postives = 69/88 (78.41%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRK 264
            M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA R RKYNWS KA RR TTGTGRMR+L+ V RRF+ GFREGT   P++
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKR 88
[Close]
BLAST of Vigun05g254300.1 vs. DB:Swiss
Match: RL37_HUMAN (60S ribosomal protein L37 OS=Homo sapiens OX=9606 GN=RPL37 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.158e-36
Identity = 60/88 (68.18%), Postives = 69/88 (78.41%), Query Frame = 1 
Query:    1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRK 264
            M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA R RKYNWS KA RR TTGTGRMR+L+ V RRF+ GFREGT   P++
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKR 88
The following BLAST results are available for this feature:
BLAST of Vigun05g254300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RL373_ARATH2.868e-5483.1660S ribosomal protein L37-3 OS=Arabidopsis thalian... [more]
RL372_ARATH8.982e-5483.1660S ribosomal protein L37-2 OS=Arabidopsis thalian... [more]
RL371_ARATH5.494e-5382.9860S ribosomal protein L37-1 OS=Arabidopsis thalian... [more]
RL371_DROME2.076e-4071.59Probable 60S ribosomal protein L37-A OS=Drosophila... [more]
RL37A_YEAST2.024e-3870.2460S ribosomal protein L37-A OS=Saccharomyces cerev... [more]
RL37B_YEAST5.254e-3868.2460S ribosomal protein L37-B OS=Saccharomyces cerev... [more]
RL37_SPOFR1.952e-3766.6760S ribosomal protein L37 OS=Spodoptera frugiperda... [more]
RL37_RAT1.158e-3668.1860S ribosomal protein L37 OS=Rattus norvegicus OX=... [more]
RL37_MOUSE1.158e-3668.1860S ribosomal protein L37 OS=Mus musculus OX=10090... [more]
RL37_HUMAN1.158e-3668.1860S ribosomal protein L37 OS=Homo sapiens OX=9606 ... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011331Ribosomal protein L37ae/L37eGENE3D2.20.25.30coord: 1..87
e-value: 3.0E-46
score: 157.5
IPR001569Ribosomal protein L37ePFAMPF01907Ribosomal_L37ecoord: 3..53
e-value: 1.7E-26
score: 92.1
IPR001569Ribosomal protein L37eHAMAPMF_00547Ribosomal_L37ecoord: 2..53
score: 16.273
IPR018267Ribosomal protein L37e, conserved sitePROSITEPS01077RIBOSOMAL_L37Ecoord: 4..23
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 1..55

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun05g254300.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g254300.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g254300.1; organism=Vigna unguiculata; type=mRNA; length=1098bp
GTTTTATAATTGGGCTACATAGTCGGCCCAAACACAAAAATAACCTTAGG
GACTGTGCCGGCACATATGTAAATTCTCTTCCTCTTCTTTCGCAACAATT
AGGTTTCTGCTCTGCTGCTACAATCAATGGGGAAGGGAACAGGGAGTTTC
GGTAAGAGGAGGAACAAGACCCACACCCTCTGTGTCAGATGCGGCCGTCG
CAGCTTCCACCTCCAGAAGAGTCGTTGTGCTGCGTGTGCTTTCCCAGCAG
CGCGCACTAGAAAATATAACTGGAGTGTGAAGGCCATTAGGAGAAAGACC
ACTGGAACCGGAAGAATGAGGTACCTGCGTCACGTGCCTCGCCGATTCAA
GAGCGGCTTCAGAGAGGGTACCGAGGCTGCACCCAGGAAGAGAGGAGCGG
CTACCACTGTCTAAGCTTTGGAAGGTAGCAATTTTATTTTTCTGGATCAT
TCAATTGTTGGAGTTAATCCTTACCTTGTGGAACAATTTTTCTTTCTGTC
GTTTTGATCTCATTTGATATATATGGATTTGTATTTCAACTTGAGGATGG
TATGGAGTTTTGGTTTGATAGTGTTTTTACGTCTATTTTTTAGTTTTCAA
CTAAGGCCTTATTTTTGGTGTTTTGTGGTTGTTGGCAATGAATTAGAATT
TACTAGTTTATGGTAATTGTGCTAATATGGTAGTTTGGATTGTGGCCTTG
GCTTATATTTTGCTACATTAGGAGAATTTGAGATTAGAATATGTCACTAT
TTGATGATTTATCAAAAGGTTATTGGTTTGTGATTATGTAATTTTAAATG
GCTTTCCATCCAAGAAGCTAGAATATTTCAACAAGGAAGAAAACTAAGAC
ATCTCACTGTATGTGGAGGGGGAGATAAGAAAATTACAAATGTAAAAAAT
TCTTCACAATCATGTCTCACCTGATAATGTTCCCTTGATAGAAGAATTTG
AGAATATGCTAGTTTGCGATAGATAACATGTAATGGTAAGAGATAGTCAA
ATATTGGATAGTTTTTGTTTTTGCTAATCAATTTCTCTCAGATAAAGTTA
TACAAATATTGAAGAATTTACTGTTGAATCCCTAGTTGTTCGACACAA
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protein sequence of Vigun05g254300.1_Vu_IT97K-499-35_v1.1

>Vigun05g254300.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g254300.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g254300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=96bp
MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWS
VKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAATTV*
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mRNA from alignment at Vu05:44894611..44895936-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun05g254300.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g254300.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g254300.1; organism=Vigna unguiculata; type=mRNA; length=1326bp; location=Sequence derived from: Vu05:44894611..44895936- (Vigna unguiculata
GTTTTATAATTGGGCTACATAGTCGGCCCAAACACAAAAATAACCTTAGG
GACTGTGCCGGCACATATGTAAATTCTCTTCCTCTTCTTTCGCAACAATT
AGGTTTCTGCTCTGCTGCTACAATCAATGGTATCGTCTTTTTTTCTTTAT
TCTGTGTTGACCTAATACGAATCTGCTTCTGATGGTGTTTGGATTTTGCA
TAAGTGCAGGGGAAGGGAACAGGGAGTTTCGGTAAGAGGAGGAACAAGAC
CCACACCCTCTGTGTCAGATGCGGCCGTCGCAGCTTCCACCTCCAGAAGA
GTCGTTGTGCTGCGTGTGCTTTCCCAGCAGCGCGCACTAGAAAATGTAAC
TCTTTTACTTTCTAAATTTAGGGTTTGTGTTAAGGATTCTGTCTTGATTG
TTCTATGGTTTCAGATAACTGGAGTGTGAAGGCCATTAGGAGAAAGACCA
CTGGAACCGGAAGAATGAGGTACCTGCGTCACGTGCCTCGCCGATTCAAG
AGCGGCTTCAGAGAGGGTATAATCGGTTAATTATTTGAGTGTTTAAATTT
GGGAATTGGTTTAGGGTTTTGGCTAACGTGGTGATTTTGAATCAGGTACC
GAGGCTGCACCCAGGAAGAGAGGAGCGGCTACCACTGTCTAAGCTTTGGA
AGGTAGCAATTTTATTTTTCTGGATCATTCAATTGTTGGAGTTAATCCTT
ACCTTGTGGAACAATTTTTCTTTCTGTCGTTTTGATCTCATTTGATATAT
ATGGATTTGTATTTCAACTTGAGGATGGTATGGAGTTTTGGTTTGATAGT
GTTTTTACGTCTATTTTTTAGTTTTCAACTAAGGCCTTATTTTTGGTGTT
TTGTGGTTGTTGGCAATGAATTAGAATTTACTAGTTTATGGTAATTGTGC
TAATATGGTAGTTTGGATTGTGGCCTTGGCTTATATTTTGCTACATTAGG
AGAATTTGAGATTAGAATATGTCACTATTTGATGATTTATCAAAAGGTTA
TTGGTTTGTGATTATGTAATTTTAAATGGCTTTCCATCCAAGAAGCTAGA
ATATTTCAACAAGGAAGAAAACTAAGACATCTCACTGTATGTGGAGGGGG
AGATAAGAAAATTACAAATGTAAAAAATTCTTCACAATCATGTCTCACCT
GATAATGTTCCCTTGATAGAAGAATTTGAGAATATGCTAGTTTGCGATAG
ATAACATGTAATGGTAAGAGATAGTCAAATATTGGATAGTTTTTGTTTTT
GCTAATCAATTTCTCTCAGATAAAGTTATACAAATATTGAAGAATTTACT
GTTGAATCCCTAGTTGTTCGACACAA
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Coding sequence (CDS) from alignment at Vu05:44894611..44895936-

>Vigun05g254300.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g254300.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g254300.1; organism=Vigna unguiculata; type=CDS; length=288bp; location=Sequence derived from: Vu05:44894611..44895936- (Vigna unguiculata
ATGGGGAAGGGAACAGGGAGTTTCGGTAAGAGGAGGAACAAGACCCACAC
CCTCTGTGTCAGATGCGGCCGTCGCAGCTTCCACCTCCAGAAGAGTCGTT
GTGCTGCGTGTGCTTTCCCAGCAGCGCGCACTAGAAAATATAACTGGAGT
GTGAAGGCCATTAGGAGAAAGACCACTGGAACCGGAAGAATGAGGTACCT
GCGTCACGTGCCTCGCCGATTCAAGAGCGGCTTCAGAGAGGGTACCGAGG
CTGCACCCAGGAAGAGAGGAGCGGCTACCACTGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011331Ribosomal_eL37/eL43
IPR001569Ribosomal_eL37
IPR018267Ribosomal_L37e_CS
IPR011332Ribosomal_zn-bd
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation