Vigun05g263200.1

Transcript Overview
NameVigun05g263200.1
Unique NameVigun05g263200.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1375
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu05supercontigVu05:45570311..45572774 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL094Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL103Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL065Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL423Pisum sativum Cameor genome v1aPisum sativum
psvuL782Pisum sativum Cameor genome v1aPisum sativum
pvvuL180Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL198Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL044Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0066Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL522Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0377Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0422Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0108Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0280Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0738Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0994Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1056Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1110Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL125Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL594Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR395Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR412Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL201Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL173Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL724Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL734Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL682Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL693Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL220Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL305Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL244Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR261Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR275Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL044Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL491Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL059Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL515Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL039Cicer arietinum
carvuL488Cicer arietinum
ccavuL099Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL387Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR483Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR489Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR494Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR418Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR450Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR469Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL470Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL523Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL486Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL529Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL161Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL422Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR316Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR337Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat5g287080.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.06G206800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_004486897.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.L010143.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_05926Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058924345.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan05g194400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014666536.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr05.2478Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014641946.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_07G00355.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va05G051950.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.06G178400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-KK1_028844Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_02652Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_23499.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
jg10115.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_04480Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_06G01426.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.011G058600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr05.965Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-KK1_013890Cajanus cajan Asha genome v1.0Cajanus cajan
PvulFLAVERTChr11.1000381Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.model.Chr11.1514Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan08g161700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Tiffany.R1.1g020560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0791800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va08G065760.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.07G044900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_09203.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_01101.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.07G033300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_06G00059.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.1g030760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun11g161500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun11g161500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun11g004300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun05g263200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun05g263200Vigun05g263200_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g263200.1Vigun05g263200.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun05g263200.1_Vu_IT97K-499-35_v1.1Vigun05g263200.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g263200.1.v1.1.five_prime_UTR.1Vigun05g263200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g263200.1.v1.1.CDS.1Vigun05g263200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun05g263200.1.v1.1.CDS.2Vigun05g263200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g263200.1.v1.1.three_prime_UTR.1Vigun05g263200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP2_ARATH (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 2.817e-123
Identity = 166/188 (88.30%), Postives = 177/188 (94.15%), Query Frame = 1
Query:  421 SRINKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGIDCFDQDDEAASEIEH-ENVNESLLS 981
            SR+NKGQYWIPTP+QILIGPTQFSCP+CFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPCYCCAP C+NNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKC KAFAVRGDWRTHEKNCGKLWYC CGSDFKHKRSLKDHIKAFGNGH A+GID FD++DE ASE+E  +N +ES+ S
Sbjct:  195 SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHESMQS 382          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 4.524e-118
Identity = 197/346 (56.94%), Postives = 228/346 (65.90%), Query Frame = 1
Query:    1 MTHPFCSNHFNSWFDLNXXXXXXXXXXXXXXXXXXXXXXXXXXTF---HHNQSSSPP----KEALPLLNLSPARGEDLESSFSAMKVNREKEREASIXXXXXXXXMDDETVTVALHLGLPNXXXXXXXXXXXXXXXPHKEKACEYS-----------------PSRINKGQ-YWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGIDCFDQDDE----AASEIE 951
            M++P CSN FN+  D NS    +S S   +S             +    H  S+SP     +EALPLL+LSP R ++ +     M  ++           ++SN +DD  VTV LHLGLPN     S  S+    +   E+  ++                     +++G  YWIPTP+QILIGPTQF+CPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPC+CCAP CKNNIDHPRAKPLKDFRTLQTHYKRKHG KPF CR C KAFAV+GDWRTHEKNCGKLWYCSCGSDFKHKRSLKDH+KAFGNGH   GID F  D E    AAS+IE
Sbjct:    1 MSNPACSNLFNNGCDHNSFNYSTSLSYIYNSHGSYYYSNTTNPNYINHTHTTSTSPNSPPLREALPLLSLSPIRHQEQQDQHYFMDTHQ----------ISSSNFLDDPLVTVDLHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYDAASDIE 336          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP4_ARATH (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 3.501e-111
Identity = 179/293 (61.09%), Postives = 210/293 (71.67%), Query Frame = 1
Query:  151 SSPPKEALPLLNLSPARGEDLESSFSAMKVNREKEREASIXXXXXXXXMDD--ETVTVALHLGLPNXXXXXXXXXXXXXXXP---------HKEKACEYSPSR--------INKG----QYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHK-AFGIDCFDQDDEAASEIEHE 957
            S P +EALPLL+LSP      E + +  +    +  E S +SN      D     VTV LHLGLPN     S+ S     S          H+++  E + +         + +G     +WIPTP+QIL+GPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAML+LPCYCCAP CKNNIDHPRA+PLKDFRTLQTHYKRKHG++PF CR+C KAFAV+GDWRTHEKNCGKLWYCSCGSDFKHKRSLKDH+KAFGNGH    GID   +++EAAS++E +
Sbjct:  122 SPPLREALPLLSLSPIHKHQ-EPTANHHEYYFMETTETSSNSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGNHLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGID--HEEEEAASDVEQQ 411          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP6_ARATH (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.269e-95
Identity = 137/202 (67.82%), Postives = 160/202 (79.21%), Query Frame = 1
Query:  310 VTVALHLGLPNXXXXXXXXXXXXXXXPHKEKACEYSPSRINKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQ-PTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCC-KAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGI 909
            VTVALH+G P++     +  ++      ++            GQYWIP+ +QIL+GPTQFSC +C KTFNR+NNMQMHMWGHGSQYRKGPESLRGT+  +++LRLPCYCCA  CKNNIDHPR+KPLKDFRTLQTHYKRKHG KPF CRK C K FAVRGDWRTHEKNCGKLW+C CGSDFKHKRSLKDH++AFG+GH A  +
Sbjct:   54 VTVALHIGPPSSDKETLSGGNNQEGLTARQ------------GQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTV 243          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP3_ARATH (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.675e-91
Identity = 125/172 (72.67%), Postives = 147/172 (85.47%), Query Frame = 1
Query:  439 QYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGT-QPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHK---AFGIDCFDQDDEAAS 942
            ++WIP+PAQI +GP QF+C +C KTFNRYNNMQMHMWGHGS++RKG +SL+GT QP A+LRLPCYCCA  CKNNI+HPR+KPLKDFRTLQTHYKRKHG KPF C KC KA AV+GDWRTHEKNCGKLWYC+CGSDFKHKRSLKDHI++FG+GH    +   D F++D E  +
Sbjct:  164 RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEEDTECVT 335          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.946e-91
Identity = 136/222 (61.26%), Postives = 154/222 (69.37%), Query Frame = 1
Query:  310 VTVALHLGLPNXXXXXXXXXXXXXXXPHKEKACEYSPSRINKG--------QYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGIDCFDQDDEAASEIE 951
            V V LH+GLP     ++           K    E +     KG         YWIP P QILIG T FSC +CFKTFNRYNN+QMHMWGHGSQYRKGPESL+GTQP AML +PCYCC   C+N+IDHPR+KPLKDFRTLQTHYKRKHG KPF CR C K  AV+GDWRTHEKNCGK W C CGSDFKHKRSLKDH+KAFG+GH  +    F++    +S  E
Sbjct:   83 VDVDLHIGLPGFGKPSNDAKQLK-----KRNGKEIATYDAGKGIENELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGLFEEQASNSSVSE 299          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana OX=3702 GN=STOP1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.366e-24
Identity = 64/172 (37.21%), Postives = 88/172 (51.16%), Query Frame = 1
Query:  427 INKGQYWIPTPAQIL-------IGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGP-------ESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKC-CKAFAVRGDWRTHEKNCGK-LWYCSCGSDFKHKRSLKDHIKAFGNGH 894
            + +G+   P   +IL       + P    C +C K F R  N++MHM GHG +Y+          ES+ G++P  + R  C      CK N +H + +PLK    ++ HYKR H  K F C +C  K F+V  D +THEK+CGK  W CSCG+ F  K  L  HI  F  GH
Sbjct:  217 VEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLG--CKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALF-QGH 385          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: STOP1_ORYSJ (Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0871200 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.201e-21
Identity = 54/153 (35.29%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  469 LIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC--YCCA-PECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKC-CKAFAVRGDWRTHEKNCGK-LWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGID 912
            ++ P    C +C K F R  N++MHM GHG +Y+      + ++ +++   P   Y C    CK N +H + +PLK    ++ HYKR H  K + C +C  K F+V  D +THEK+CG+  W CSCG+ F  K  L  H+  F     A  +D
Sbjct:  276 ILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMD 428          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: STOP2_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 OS=Arabidopsis thaliana OX=3702 GN=STOP2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.970e-20
Identity = 60/151 (39.74%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  460 AQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAM-------LRLPCYCCAPE-CKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKC-CKAFAVRGDWRTHEKNCGKL-WYCSCGSDFKHKRSLKDHIKAF 882
            A +L   T + C +C K F R  N++MHM  HG +Y K  E+L    PT+        L+   Y C    C+ N  H + +PLK     + HYKR H  K +MCR+C  K F+V  D RTHEK+CG + W CSCG+ F  K  L  H+  F
Sbjct:  209 ADLLAKYTHY-CQICGKGFKRDANLRMHMRAHGDEY-KTREAL--ISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLF 355          
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: IDD10_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana OX=3702 GN=JKD PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.633e-17
Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 1
Query:  469 LIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWY-CSCGSDFKHKRSLKDHIKAF 882
            L+   +F C +C K F R  N+Q+H  GH       P  L+      +++   Y C    K  + H  ++ L D   ++ HY RKHG K + C KC K +AV+ DW+ H K CG   Y C CG+ F  K S   H +AF
Sbjct:   76 LMATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRSKQEVIKKKVYICP--IKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITH-RAF 206          
The following BLAST results are available for this feature:
BLAST of Vigun05g263200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ZWIP2_ARATH2.817e-12388.30Zinc finger protein WIP2 OS=Arabidopsis thaliana O... [more]
ZWIP5_ARATH4.524e-11856.94Zinc finger protein WIP5 OS=Arabidopsis thaliana O... [more]
ZWIP4_ARATH3.501e-11161.09Zinc finger protein WIP4 OS=Arabidopsis thaliana O... [more]
ZWIP6_ARATH3.269e-9567.82Zinc finger protein WIP6 OS=Arabidopsis thaliana O... [more]
ZWIP3_ARATH1.675e-9172.67Zinc finger protein WIP3 OS=Arabidopsis thaliana O... [more]
TT1_ARATH9.946e-9161.26Protein TRANSPARENT TESTA 1 OS=Arabidopsis thalian... [more]
STOP1_ARATH8.366e-2437.21Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Ara... [more]
STOP1_ORYSJ2.201e-2135.29Zinc finger protein STOP1 homolog OS=Oryza sativa ... [more]
STOP2_ARATH3.970e-2039.74Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 OS=Ara... [more]
IDD10_ARATH1.633e-1735.25Zinc finger protein JACKDAW OS=Arabidopsis thalian... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..132
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 165..185
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 163..190
score: 9.66
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 136..185
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 229..267

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun05g263200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g263200.1; organism=Vigna unguiculata; type=mRNA; length=1375bp
CTCCCCTTTCTTTACTTTATTGGGTCTGCTTTACCAACATTGGATTTCTA
ACTCCTCTTCTTCCTCACTCTTCCATTATGCTTATTATTTTCTTAACTCT
CAAACTTATCTTTTGCTTACCTTTATTTAtctacctctccctcaactcct
cctccaccactaccacactacctcttctctctTTCATAATAACCTAATCC
TTTCTACACTCTCATCATCATCATGACTCACCCCTTTTGCTCCAATCACT
TCAATTCTTGGTTTGACCTCAATTCTCCATTCCTTTTCtcttcttcttct
tcttcttcttcttcATCACCTTGCTCCAACCCTCCATTCTATTTTCCTTC
TACTTTTCATCACAATCAATCTTCTTCTCCCCCCAAAGAAGCACTTCCTC
TCCTTAACCTTAGCCCTGCAAGGGGTGAAGATCTTGAATCTTCCTTCAGT
GCCATGAAAGTCAACAGAGAGAAGGAGAGAGAAGCAAGCATATCGTCCAA
TAATAACTCCAACTCCATGGATGATGAAACTGTCACCGTGGCTTTGCACT
TAGGGCTTCCAAACACTACTGCTTCTGCTTCTGCTGATTCATCTTCAAAC
ACATACTCACCACACAAAGAAAAAGCTTGTGAGTATTCTCCCAGTAGAAT
TAACAAGGGCCAATATTGGATCCCTACCCCTGCTCAAATTCTCATCGGTC
CAACACAGTTCTCCTGCCCCCTTTGTTTCAAGACTTTCAACAGATACAAC
AACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGAAAGGGGCC
AGAGTCTCTGAGAGGAACTCAACCAACAGCAATGCTTAGACTTCCTTGCT
ATTGTTGTGCACCTGAATGCAAGAACAACATTGATCATCCAAGAGCAAAG
CCACTCAAAGATTTTAGGACCCTCCAAACTCATTACAAGAGAAAGCATGG
AATCAAGCCCTTCATGTGCAGAAAATGCTGCAAAGCTTTTGCTGTTAGGG
GTGATTGGAGGACCCATGAGAAGAACTGTGGCAAGTTATGGTATTGCTCT
TGTGGCTCTGATTTCAAGCACAAACGCTCTCTCAAAGATCATATCAAGGC
TTTTGGGAATGGACATAAAGCTTTTGGAATCGATTGTTTTGACCAGGACG
ATGAAGCTGCCTCTGAAATTGAGCATGAAAATGTCAATGAATCTTTACTT
TCTAGTCATAGTTGATGTGTCACATTTGAGGATTCTCATGTTTTCAAACT
GATATTAAATTCTTCACTGTCTCACTCCCTTCTCTAACCATTTCTTGTTT
CTTCATTCTGCATAATCAAATTTCTGTAACTTCTTCTTTTCTCTCATTTT
GCTTCTGGTTTCTATGTTCAAATTT
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protein sequence of Vigun05g263200.1_Vu_IT97K-499-35_v1.1

>Vigun05g263200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=331bp
MTHPFCSNHFNSWFDLNSPFLFSSSSSSSSSSPCSNPPFYFPSTFHHNQS
SSPPKEALPLLNLSPARGEDLESSFSAMKVNREKEREASISSNNNSNSMD
DETVTVALHLGLPNTTASASADSSSNTYSPHKEKACEYSPSRINKGQYWI
PTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQ
PTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR
KCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKA
FGIDCFDQDDEAASEIEHENVNESLLSSHS*
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mRNA from alignment at Vu05:45570311..45572774+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun05g263200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g263200.1; organism=Vigna unguiculata; type=mRNA; length=2464bp; location=Sequence derived from: Vu05:45570311..45572774+ (Vigna unguiculata
CTCCCCTTTCTTTACTTTATTGGGTCTGCTTTACCAACATTGGATTTCTA ACTCCTCTTCTTCCTCACTCTTCCATTATGCTTATTATTTTCTTAACTCT CAAACTTATCTTTTGCTTACCTTTATTTATCTACCTCTCCCTCAACTCCT CCTCCACCACTACCACACTACCTCTTCTCTCTTTCATAATAACCTAATCC TTTCTACACTCTCATCATCATCATGACTCACCCCTTTTGCTCCAATCACT TCAATTCTTGGTTTGACCTCAATTCTCCATTCCTTTTCTCTTCTTCTTCT TCTTCTTCTTCTTCATCACCTTGCTCCAACCCTCCATTCTATTTTCCTTC TACTTTTCATCACAATCAATCTTCTTCTCCCCCCAAAGAAGCACTTCCTC TCCTTAACCTTAGCCCTGCAAGGGGTGAAGATCTTGAATCTTCCTTCAGT GCCATGAAAGTCAACAGAGAGAAGGAGAGAGAAGCAAGCATATCGTCCAA TAATAACTCCAACTCCATGGATGATGAAACTGTCACCGTGGCTTTGCACT TAGGGCTTCCAAACACTACTGCTTCTGCTTCTGCTGATTCATCTTCAAAC ACATACTCACCACACAAAGAAAAAGCTTGTGAGTATTCTCCCAGTAGAAT TAACAAGGGCCAATATTGGATCCCTACCCCTGCTCAAATTCTCATCGGTC CAACACAGTTCTCCTGCCCCCTTTGTTTCAAGACTTTCAACAGATACAAC AACATGCAGGTACTTAAAAACCATCAAACCATTCATTCAAGATGGTTCAT ATATAGAAGGAAAAGAAAAAGAATGTTATCACTTTCTTTCTTTTGATTAT TGTTTTTTTCACTCCTACAATAATCCTACCACATACTTTCCCAGATCTTA CTTTTGTGGAAAATTGTTGAAAAGAAAATTTCCATTTGTAAATATCATCA CTTTTAATTATTTTTAGCCTATAACCTATGCTGTCTTCAATTCCTTACGG GAGCACTTGTGTAATTTAGGGTTTTTGTAACAACTATTGCATGTCCTTTA TTTTTTTATCTTAAGCTAATCAATCAATCTCAAAGGTTTTTTACCATGCC CCTTTTGTAGTCGAAGAGACGAAAATGGAAAAATCCCACTCCAATGAAAG ATCAGTACTATTTATTAAGGCTATATTTTGAGGACCTGCAAAGTGTTATT AACTGGTGTTAAACAGAAAACGGCAGGGACTAACTATTGATATCTAGGGC TTATTTTAAATCTTATGCTAAAGATGTTACATAGAGAGAACAACAACGTT AACACCAACAACACGAGGTGACATAAAGTGAAACAACATCAATAAATTAA GTTTTCATTATTAGTACAACACGCATGGAGTGAGTTTTTATTTTGATCTC TACAAACATAAACAAAAATAGCTGTCCAATATTCCCTTGTTGGGCTTCCG AGCTACTACTTTATTAGGATGCCCTACATTGTTACCTTTTTTCTTTACTC CTAGACCATATAGGTGACTAAGAAGTATTGAAACATGTTGAAAAAGACGC GGGTCCTTGATTATACATATATGTATATATATATATCCTTAGGCTTTCTG ACTCAAAATCTTGGCCTGTTCGGGAAAATAATTCTTAATCTTAACAATGT TACATGCAATGCAACAAACAAAGATAGTGTTTGTAGGGAATCCGATTTCA CAGTGAGGCTTTTGGACTGTATCGATGGTTCCAAATATTTAACATGTGAA TGTGAGTGAGTGAATGAATGATTTTCACCACACCCCTTTTGAACTGTTTT GGTGTTGAATGATGATGATGATGTTGCTCCAAAAATTAACCTTTGCAGAT GCATATGTGGGGGCATGGATCTCAATATAGAAAGGGGCCAGAGTCTCTGA GAGGAACTCAACCAACAGCAATGCTTAGACTTCCTTGCTATTGTTGTGCA CCTGAATGCAAGAACAACATTGATCATCCAAGAGCAAAGCCACTCAAAGA TTTTAGGACCCTCCAAACTCATTACAAGAGAAAGCATGGAATCAAGCCCT TCATGTGCAGAAAATGCTGCAAAGCTTTTGCTGTTAGGGGTGATTGGAGG ACCCATGAGAAGAACTGTGGCAAGTTATGGTATTGCTCTTGTGGCTCTGA TTTCAAGCACAAACGCTCTCTCAAAGATCATATCAAGGCTTTTGGGAATG GACATAAAGCTTTTGGAATCGATTGTTTTGACCAGGACGATGAAGCTGCC TCTGAAATTGAGCATGAAAATGTCAATGAATCTTTACTTTCTAGTCATAG TTGATGTGTCACATTTGAGGATTCTCATGTTTTCAAACTGATATTAAATT CTTCACTGTCTCACTCCCTTCTCTAACCATTTCTTGTTTCTTCATTCTGC ATAATCAAATTTCTGTAACTTCTTCTTTTCTCTCATTTTGCTTCTGGTTT CTATGTTCAAATTT
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Coding sequence (CDS) from alignment at Vu05:45570311..45572774+

>Vigun05g263200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g263200.1; organism=Vigna unguiculata; type=CDS; length=993bp; location=Sequence derived from: Vu05:45570311..45572774+ (Vigna unguiculata
ATGACTCACCCCTTTTGCTCCAATCACTTCAATTCTTGGTTTGACCTCAA
TTCTCCATTCCTTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCATCACCTT
GCTCCAACCCTCCATTCTATTTTCCTTCTACTTTTCATCACAATCAATCT
TCTTCTCCCCCCAAAGAAGCACTTCCTCTCCTTAACCTTAGCCCTGCAAG
GGGTGAAGATCTTGAATCTTCCTTCAGTGCCATGAAAGTCAACAGAGAGA
AGGAGAGAGAAGCAAGCATATCGTCCAATAATAACTCCAACTCCATGGAT
GATGAAACTGTCACCGTGGCTTTGCACTTAGGGCTTCCAAACACTACTGC
TTCTGCTTCTGCTGATTCATCTTCAAACACATACTCACCACACAAAGAAA
AAGCTTGTGAGTATTCTCCCAGTAGAATTAACAAGGGCCAATATTGGATC
CCTACCCCTGCTCAAATTCTCATCGGTCCAACACAGTTCTCCTGCCCCCT
TTGTTTCAAGACTTTCAACAGATACAACAACATGCAGATGCATATGTGGG
GGCATGGATCTCAATATAGAAAGGGGCCAGAGTCTCTGAGAGGAACTCAA
CCAACAGCAATGCTTAGACTTCCTTGCTATTGTTGTGCACCTGAATGCAA
GAACAACATTGATCATCCAAGAGCAAAGCCACTCAAAGATTTTAGGACCC
TCCAAACTCATTACAAGAGAAAGCATGGAATCAAGCCCTTCATGTGCAGA
AAATGCTGCAAAGCTTTTGCTGTTAGGGGTGATTGGAGGACCCATGAGAA
GAACTGTGGCAAGTTATGGTATTGCTCTTGTGGCTCTGATTTCAAGCACA
AACGCTCTCTCAAAGATCATATCAAGGCTTTTGGGAATGGACATAAAGCT
TTTGGAATCGATTGTTTTGACCAGGACGATGAAGCTGCCTCTGAAATTGA
GCATGAAAATGTCAATGAATCTTTACTTTCTAGTCATAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding