Vigun05g263200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP2_ARATH (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 2.817e-123 Identity = 166/188 (88.30%), Postives = 177/188 (94.15%), Query Frame = 1 Query: 421 SRINKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGIDCFDQDDEAASEIEH-ENVNESLLS 981 SR+NKGQYWIPTP+QILIGPTQFSCP+CFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPCYCCAP C+NNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKC KAFAVRGDWRTHEKNCGKLWYC CGSDFKHKRSLKDHIKAFGNGH A+GID FD++DE ASE+E +N +ES+ S Sbjct: 195 SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHESMQS 382
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 4.524e-118 Identity = 197/346 (56.94%), Postives = 228/346 (65.90%), Query Frame = 1 Query: 1 MTHPFCSNHFNSWFDLNXXXXXXXXXXXXXXXXXXXXXXXXXXTF---HHNQSSSPP----KEALPLLNLSPARGEDLESSFSAMKVNREKEREASIXXXXXXXXMDDETVTVALHLGLPNXXXXXXXXXXXXXXXPHKEKACEYS-----------------PSRINKGQ-YWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGIDCFDQDDE----AASEIE 951 M++P CSN FN+ D NS +S S +S + H S+SP +EALPLL+LSP R ++ + M ++ ++SN +DD VTV LHLGLPN S S+ + E+ ++ +++G YWIPTP+QILIGPTQF+CPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT MLRLPC+CCAP CKNNIDHPRAKPLKDFRTLQTHYKRKHG KPF CR C KAFAV+GDWRTHEKNCGKLWYCSCGSDFKHKRSLKDH+KAFGNGH GID F D E AAS+IE Sbjct: 1 MSNPACSNLFNNGCDHNSFNYSTSLSYIYNSHGSYYYSNTTNPNYINHTHTTSTSPNSPPLREALPLLSLSPIRHQEQQDQHYFMDTHQ----------ISSSNFLDDPLVTVDLHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYDAASDIE 336
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP4_ARATH (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 3.501e-111 Identity = 179/293 (61.09%), Postives = 210/293 (71.67%), Query Frame = 1 Query: 151 SSPPKEALPLLNLSPARGEDLESSFSAMKVNREKEREASIXXXXXXXXMDD--ETVTVALHLGLPNXXXXXXXXXXXXXXXP---------HKEKACEYSPSR--------INKG----QYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHK-AFGIDCFDQDDEAASEIEHE 957 S P +EALPLL+LSP E + + + + E S +SN D VTV LHLGLPN S+ S S H+++ E + + + +G +WIPTP+QIL+GPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAML+LPCYCCAP CKNNIDHPRA+PLKDFRTLQTHYKRKHG++PF CR+C KAFAV+GDWRTHEKNCGKLWYCSCGSDFKHKRSLKDH+KAFGNGH GID +++EAAS++E + Sbjct: 122 SPPLREALPLLSLSPIHKHQ-EPTANHHEYYFMETTETSSNSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGNHLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGID--HEEEEAASDVEQQ 411
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP6_ARATH (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 3.269e-95 Identity = 137/202 (67.82%), Postives = 160/202 (79.21%), Query Frame = 1 Query: 310 VTVALHLGLPNXXXXXXXXXXXXXXXPHKEKACEYSPSRINKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQ-PTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCC-KAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGI 909 VTVALH+G P++ + ++ ++ GQYWIP+ +QIL+GPTQFSC +C KTFNR+NNMQMHMWGHGSQYRKGPESLRGT+ +++LRLPCYCCA CKNNIDHPR+KPLKDFRTLQTHYKRKHG KPF CRK C K FAVRGDWRTHEKNCGKLW+C CGSDFKHKRSLKDH++AFG+GH A + Sbjct: 54 VTVALHIGPPSSDKETLSGGNNQEGLTARQ------------GQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTV 243
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: ZWIP3_ARATH (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.675e-91 Identity = 125/172 (72.67%), Postives = 147/172 (85.47%), Query Frame = 1 Query: 439 QYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGT-QPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHK---AFGIDCFDQDDEAAS 942 ++WIP+PAQI +GP QF+C +C KTFNRYNNMQMHMWGHGS++RKG +SL+GT QP A+LRLPCYCCA CKNNI+HPR+KPLKDFRTLQTHYKRKHG KPF C KC KA AV+GDWRTHEKNCGKLWYC+CGSDFKHKRSLKDHI++FG+GH + D F++D E + Sbjct: 164 RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEEDTECVT 335
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.946e-91 Identity = 136/222 (61.26%), Postives = 154/222 (69.37%), Query Frame = 1 Query: 310 VTVALHLGLPNXXXXXXXXXXXXXXXPHKEKACEYSPSRINKG--------QYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGIDCFDQDDEAASEIE 951 V V LH+GLP ++ K E + KG YWIP P QILIG T FSC +CFKTFNRYNN+QMHMWGHGSQYRKGPESL+GTQP AML +PCYCC C+N+IDHPR+KPLKDFRTLQTHYKRKHG KPF CR C K AV+GDWRTHEKNCGK W C CGSDFKHKRSLKDH+KAFG+GH + F++ +S E Sbjct: 83 VDVDLHIGLPGFGKPSNDAKQLK-----KRNGKEIATYDAGKGIENELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGLFEEQASNSSVSE 299
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana OX=3702 GN=STOP1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 8.366e-24 Identity = 64/172 (37.21%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 427 INKGQYWIPTPAQIL-------IGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGP-------ESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKC-CKAFAVRGDWRTHEKNCGK-LWYCSCGSDFKHKRSLKDHIKAFGNGH 894 + +G+ P +IL + P C +C K F R N++MHM GHG +Y+ ES+ G++P + R C CK N +H + +PLK ++ HYKR H K F C +C K F+V D +THEK+CGK W CSCG+ F K L HI F GH Sbjct: 217 VEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLG--CKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALF-QGH 385
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: STOP1_ORYSJ (Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0871200 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.201e-21 Identity = 54/153 (35.29%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 469 LIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC--YCCA-PECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKC-CKAFAVRGDWRTHEKNCGK-LWYCSCGSDFKHKRSLKDHIKAFGNGHKAFGID 912 ++ P C +C K F R N++MHM GHG +Y+ + ++ +++ P Y C CK N +H + +PLK ++ HYKR H K + C +C K F+V D +THEK+CG+ W CSCG+ F K L H+ F A +D Sbjct: 276 ILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMD 428
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: STOP2_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 OS=Arabidopsis thaliana OX=3702 GN=STOP2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.970e-20 Identity = 60/151 (39.74%), Postives = 80/151 (52.98%), Query Frame = 1 Query: 460 AQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAM-------LRLPCYCCAPE-CKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKC-CKAFAVRGDWRTHEKNCGKL-WYCSCGSDFKHKRSLKDHIKAF 882 A +L T + C +C K F R N++MHM HG +Y K E+L PT+ L+ Y C C+ N H + +PLK + HYKR H K +MCR+C K F+V D RTHEK+CG + W CSCG+ F K L H+ F Sbjct: 209 ADLLAKYTHY-CQICGKGFKRDANLRMHMRAHGDEY-KTREAL--ISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLF 355
BLAST of Vigun05g263200.1 vs. DB:Swiss
Match: IDD10_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana OX=3702 GN=JKD PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.633e-17 Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 469 LIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWY-CSCGSDFKHKRSLKDHIKAF 882 L+ +F C +C K F R N+Q+H GH P L+ +++ Y C K + H ++ L D ++ HY RKHG K + C KC K +AV+ DW+ H K CG Y C CG+ F K S H +AF Sbjct: 76 LMATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRSKQEVIKKKVYICP--IKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITH-RAF 206 The following BLAST results are available for this feature:
BLAST of Vigun05g263200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g263200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g263200.1; organism=Vigna unguiculata; type=mRNA; length=1375bpback to top protein sequence of Vigun05g263200.1_Vu_IT97K-499-35_v1.1 >Vigun05g263200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=331bpback to top mRNA from alignment at Vu05:45570311..45572774+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun05g263200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g263200.1; organism=Vigna unguiculata; type=mRNA; length=2464bp; location=Sequence derived from: Vu05:45570311..45572774+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu05:45570311..45572774+ >Vigun05g263200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g263200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g263200.1; organism=Vigna unguiculata; type=CDS; length=993bp; location=Sequence derived from: Vu05:45570311..45572774+ (Vigna unguiculataback to top |