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Transcript Overview
Name | Vigun06g099500.2 |
Unique Name | Vigun06g099500.2_Vu_IT97K-499-35_v1.1 |
Type | mRNA |
Organism | Vigna unguiculata (cowpea) |
Sequence length | 1879 |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun06g099500.2 | Vigun06g099500.2_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
Vigun06g099500.2_Vu_IT97K-499-35_v1.1 | Vigun06g099500.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun06g099500.2.v1.1.three_prime_UTR.3 | Vigun06g099500.2.v1.1.three_prime_UTR.3_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
Vigun06g099500.2.v1.1.three_prime_UTR.2 | Vigun06g099500.2.v1.1.three_prime_UTR.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
Vigun06g099500.2.v1.1.three_prime_UTR.1 | Vigun06g099500.2.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun06g099500.2.v1.1.CDS.11 | Vigun06g099500.2.v1.1.CDS.11_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.10 | Vigun06g099500.2.v1.1.CDS.10_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.9 | Vigun06g099500.2.v1.1.CDS.9_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.8 | Vigun06g099500.2.v1.1.CDS.8_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.7 | Vigun06g099500.2.v1.1.CDS.7_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.6 | Vigun06g099500.2.v1.1.CDS.6_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.5 | Vigun06g099500.2.v1.1.CDS.5_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.4 | Vigun06g099500.2.v1.1.CDS.4_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.3 | Vigun06g099500.2.v1.1.CDS.3_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.2 | Vigun06g099500.2.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
Vigun06g099500.2.v1.1.CDS.1 | Vigun06g099500.2.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Vigun06g099500.2.v1.1.five_prime_UTR.1 | Vigun06g099500.2.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
Homology
BLAST of Vigun06g099500.2 vs. DB:Swiss
Match: HGNAT_MOUSE (Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus OX=10090 GN=Hgsnat PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.345e-22 Identity = 105/374 (28.07%), Postives = 175/374 (46.79%), Query Frame = 1
Query: 37 SEALPLSDTKLPKSKRVAS-----LDIFRGLTVALMILVDDAGGQWPMIGHAPWNGCNLADFVMPFFLFIVGMAIPLALKRIPNRXXXXXXXXXRTXXXXXXXXXXXXXFSHAPDNLTYGVDMKHIRWCGILQRIALAYLVVALVEIFSRSAEDRDPEPTQLSIFKLY----YW-HWLVGACILAVYLALLYGMYVPDWQFTVHNPDSIYNGTTFTVTCGVRGKLDPPCN--VVGYIDREVLGINHMYKRPAWRRSEACTEKSPYEGPFKRSAPSWCYAPFEPEGXXXXXXXXXXXXXXXHFGHVLVHLQDHS----SRLKHWI-LVGLTLLGSGLILHFTHAIPLNKQLYTLSYVCVTSGAAALVFSAFYIVV 1107
S A PLS P+++R ++ +D FRGL + LM+ V+ GG++ H+ WNG +AD V P+F+FI+G +I L++ I R + K++ + + F + + + P+ + +R G+LQR+ + Y VVA++E F D + S F L W WL + +++LAL + + VP P I G GK P C GYIDR +LG NH+Y+ P+ + ++PEG+L +I++I+ +G+ G +LV+ +D + +R W ++GL + + IP+NK L+++SYV S A + Y VV
Sbjct: 240 SRADPLSADYQPETRRSSANRLRCVDTFRGLALVLMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQRGCSKLKLLGKIVWRSFLLICIGVIIVN-PNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLEFFFWKPVP-DSCTLESSCFSLRDITSSWPQWLTILTLESIWLALTFFLPVPGCPTGYLGPGGI----------GDLGKY-PHCTGGAAGYIDRLLLGDNHLYQHPS------------------STVLYHTEVAYDPEGVLGTINSIVMAFLGVQAGKILVYYKDQTKAILTRFAAWCCILGLISIVLTKVSANEGFIPINKNLWSISYVTTLSCFAFFILLILYPVV 582
BLAST of Vigun06g099500.2 vs. DB:Swiss
Match: HGNAT_HUMAN (Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens OX=9606 GN=HGSNAT PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 7.236e-20 Identity = 98/353 (27.76%), Postives = 168/353 (47.59%), Query Frame = 1
Query: 82 RVASLDIFRGLTVALMILVDDAGGQWPMIGHAPWNGCNLADFVMPFFLFIVGMAIPLALKRIPNRXXXXXXXXXRTXXXXXXXXXXXXXFSHAPDNLTYGVDMKHIRWCGILQRIALAYLVVALVEI-FSRSA-EDRDPEPTQLSIFKLYY-W-HWLVGACILAVYLALLYGMYVPDWQFTVHNPDSIYNGTTFTVTCGVRGKLDPPCN--VVGYIDREVLGINHMYKRPAWRRSEACTEKSPYEGPFKRSAPSWCYAPFEPEGXXXXXXXXXXXXXXXHFGHVLVHLQDHSS----RLKHWI-LVGLTLLGSGLILHFTHAIPLNKQLYTLSYVCVTSGAAALVFSAFYIVV 1107
R+ S+D FRG+ + LM+ V+ GG++ HA WNG +AD V P+F+FI+G +I L++ I R + +++ + F + + + P+ + +R G+LQR+ + Y VVA++E+ F++ E E + LS+ + W WL+ + ++L L + + VP P I G GK P C GYIDR +LG +H+Y+ P S A + ++PEG+L +I++I+ +G+ G +L++ + + R W ++GL + + IP+NK L++LSYV S A + Y VV
Sbjct: 267 RLRSVDTFRGIALILMVFVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQRGCSKFRLLGKIAWRSFLLICIGIIIVN-PNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLELLFAKPVPEHCASERSCLSLRDITSSWPQWLLILVLEGLWLGLTFLLPVPGCPTGYLGPGGI----------GDFGKY-PNCTGGAAGYIDRLLLGDDHLYQHP----SSAVLYHTE--------------VAYDPEGILGTINSIVMAFLGVQAGKILLYYKARTKDILIRFTAWCCILGLISVALTKVSENEGFIPVNKNLWSLSYVTTLSSFAFFILLVLYPVV 589
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR012429 | Domain of unknown function DUF1624 | PFAM | PF07786 | DUF1624 | coord: 28..152 e-value: 1.1E-6 score: 28.3 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun06g099500.2_Vu_IT97K-499-35_v1.1 ID=Vigun06g099500.2_Vu_IT97K-499-35_v1.1; Name=Vigun06g099500.2; organism=Vigna unguiculata; type=mRNA; length=1879bp GATTCATATCCTCATTTGTTGATTAATAACAATAATTTGAAAATCATGAA GATATGCACAGAGTAGCTAAATTGTTTTCTTAATCAACTATGTTATAGTA ATTATTCTGCACTAGAATCAGAAATTAGCACAGTAAAGAAAGAGACTTGA GAGTAGCATAATCCAATTCAAGTTGGAGTTTGAGTAAAAGAATTCACAAA CAGCATGGCCGAAATCAAAGGCGAACACAGCCTCAATGTTTCCGAAGCGC TTCCTCTTTCAGACACAAAGCTGCCTAAATCAAAGCGTGTCGCGTCGCTA GACATCTTTCGCGGCCTCACTGTTGCGTTAATGATCTTGGTTGATGATGC CGGAGGGCAATGGCCTATGATTGGCCATGCGCCGTGGAATGGCTGCAACC TTGCTGATTTTGTGATGCCTTTCTTTTTGTTCATTGTGGGGATGGCCATT CCTCTGGCTCTCAAGAGAATACCAAATAGAGTTGTAGCTGTAAAAAAGGT TGTGGTTAGAACACTCAAACTCCTCTTCTGGGGATTGCTCTTGCAAGGTG GTTTCTCTCATGCTCCGGATAATCTAACATATGGTGTTGACATGAAACAC ATAAGGTGGTGTGGCATTCTTCAGAGAATTGCTCTGGCATATTTGGTTGT GGCACTAGTGGAGATATTTTCAAGAAGTGCAGAAGATAGAGATCCAGAAC CCACCCAACTCTCAATATTCAAGTTGTACTATTGGCATTGGCTAGTGGGG GCTTGCATACTTGCTGTTTACTTGGCTTTACTATATGGAATGTATGTTCC GGACTGGCAATTCACTGTCCATAACCCAGACAGCATATACAATGGGACAA CTTTTACTGTGACCTGTGGTGTCAGGGGAAAACTCGATCCCCCTTGTAAT GTTGTGGGATATATTGACAGAGAGGTGCTTGGAATCAACCACATGTATAA GCGTCCAGCGTGGAGAAGATCTGAAGCTTGCACAGAGAAATCCCCATATG AAGGACCTTTTAAAAGAAGTGCACCTTCATGGTGTTATGCTCCTTTTGAG CCAGAAGGACTTTTAAGCTCAATATCTGCTATTCTCTCCACAATCATTGG ATTGCATTTTGGACATGTACTCGTACACTTACAGGATCACTCTTCTAGGT TGAAGCACTGGATTCTCGTTGGCTTAACACTCCTTGGTTCAGGACTTATT CTTCACTTCACTCATGCCATTCCTTTGAATAAACAGTTGTACACACTAAG CTATGTTTGTGTGACATCTGGAGCAGCAGCATTAGTTTTTTCAGCCTTCT ACATTGTGGTATTTTATTCGTAATACTAGAAATTGTGCCTTTCTTCTATT AAGGTTGATATTTGGGGTTTGACATTGTTGTTCTTGCCTTTGAAATGGAT TGGTATGAATGCCATGCTTGTTTATGTCATGGCAGCTGAAGGAATCTTCG CAGGATTCATCAATGGGTGGTACTATGATGACCCTCATAATACACTGACT TATTGGATACAAAAGCATGTCTTCATTAATGTTTGGCATTCGAAGAGAGT AGGAATCCTGTTGTATGTTATCTTTGCGGAGATCCTATTCTGGGCCTTTG TTGCAGGCATTTTGCACCGATTGGGTATATATTGGAAGCTTTGAATTTCT TTTTTGTTTTTCTCAAAATCTGTTGCtattattattattattttaCTGGG TGTCTGCGTAATTGTTGTATATTGTATTTGATGAATGACTGAAGAGCCAT TTCAACTTGGAAACTTGTGTGTTGTTATCATTGATACAATAATTTGACTA AAAATTGTATATGACAAACTATTGAGATAAAACTCAAGTGCAGTTACTCA TCTTATAATCTCCCAATCAAAATTATACT back to topprotein sequence of Vigun06g099500.2_Vu_IT97K-499-35_v1.1 >Vigun06g099500.2_Vu_IT97K-499-35_v1.1 ID=Vigun06g099500.2_Vu_IT97K-499-35_v1.1; Name=Vigun06g099500.2_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=373bp MAEIKGEHSLNVSEALPLSDTKLPKSKRVASLDIFRGLTVALMILVDDAG GQWPMIGHAPWNGCNLADFVMPFFLFIVGMAIPLALKRIPNRVVAVKKVV VRTLKLLFWGLLLQGGFSHAPDNLTYGVDMKHIRWCGILQRIALAYLVVA LVEIFSRSAEDRDPEPTQLSIFKLYYWHWLVGACILAVYLALLYGMYVPD WQFTVHNPDSIYNGTTFTVTCGVRGKLDPPCNVVGYIDREVLGINHMYKR PAWRRSEACTEKSPYEGPFKRSAPSWCYAPFEPEGLLSSISAILSTIIGL HFGHVLVHLQDHSSRLKHWILVGLTLLGSGLILHFTHAIPLNKQLYTLSY VCVTSGAAALVFSAFYIVVFYS* back to topmRNA from alignment at Vu06:22998427..23003968- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Vigun06g099500.2_Vu_IT97K-499-35_v1.1 ID=Vigun06g099500.2_Vu_IT97K-499-35_v1.1; Name=Vigun06g099500.2; organism=Vigna unguiculata; type=mRNA; length=5542bp; location=Sequence derived from: Vu06:22998427..23003968- (Vigna unguiculata GATTCATATCCTCATTTGTTGATTAATAACAATAATTTGAAAATCATGAA
GATATGCACAGAGTAGCTAAATTGTTTTCTTAATCAACTATGTTATAGTA
ATTATTCTGCACTAGAATCAGAAATTAGCACAGTAAAGAAAGAGACTTGA
GAGTAGCATAATCCAATTCAAGTTGGAGTTTGAGTAAAAGAATTCACAAA
CAGCATGGCCGAAATCAAAGGCGAACACAGCCTCAATGTTTCCGAAGCGC
TTCCTCTTTCAGACACAAAGCTGCCTAAATCAAAGCGTGTCGCGTCGCTA
GACATCTTTCGCGGCCTCACTGTTGCGGTGCTTCTCTCTTCTTTCTTAAT
TTTGCAGTTCAACTGTGTTTTTAGAACATTATAGAGATTGCTAAGGTTAT
GAACTGTTATAAATGAAAGCCTATGAAAATTGCTATAAAAATAGGAATAA
TATGAAGAATGCTTTGGGATTAGAGTCTATTATAGAGAACTGGTATTGGT
CACTTGTTCAATTACTTACTTGGTTACTTATTGTGTTTCTTTTTCATTTA
TATTGTTAGTATATTGAATGGTATATAAGAAAAACAAAACCGATAAAAGT
GAAAAAGTCGAATGGCATATAAGAAAAACAAGACCATAAACATTAAAGAT
TGAAGTTTCAGGTTTGAAGTAGTATATATGAGTTGTTTTTCCTTCGTTCA
GTGTTATCATGTATCATTTTGCTTATTTTTTTAGACGTGTATATCGTTAT
GATTTCGCTTTAACATGTTCTGAATCTATGTGATGTAGTTAATGATCTTG
GTTGATGATGCCGGAGGGCAATGGCCTATGATTGGCCATGCGCCGTGGAA
TGGCTGCAACCTTGCTGATTTTGTGATGCCTTTCTTTTTGTTCATTGTGG
GGATGGCCATTCCTCTGGCTCTCAAGGTTAGCTCCGAATGAGAAAATAGG
TGTCTATGAATGCTTCAAGCGTTAGTTTCTATGTTTCTTCTTTTTGATTC
AAACCAGCCCTTTGTTGATGCTTCCATTTATCTACAGAGAATACCAAATA
GAGTTGTAGCTGTAAAAAAGGTTGTGGTTAGAACACTCAAACTCCTCTTC
TGGGGATTGCTCTTGCAAGGTTAGTTTTTCTCATGCATTTCCTTTTACCC
TCCTTTTTCAAATCAGCATAACTAAATAGTTCCACTGTTCAGGAGGGGGT
GAGAAAAGGAATCGGGAACTTCTTATTTGATGTTACATACACTTCGCTGA
AATATGCTCGATCTTTTGAAAGTTATTCTTCTATAATGTGCAATACTAAT
TGAATCTAGATTTCATTTTAGCAAATCTAATTCTGGTAACATCTAAGCCA
TGCCTTGTTTTTGTATGATGGATGACCTCAATGATGAAGGTGGTTTCTCT
CATGCTCCGGATAATCTAACATATGGTGTTGACATGAAACACATAAGGTG
GTGTGGCATTCTTCAGGTGATTTTGAGATAAGGAAAATAATTCTTTGACA
ACTAAATTTTGACGACTTTATCTTACAATCTGAGATGGTATCTGTTCTTA
AGGGACCAAGTTGTACTCCACATCTGGTGTTGGGTTGTCAGTTGGGTATC
TTCTTACTCCGATGAAGCTCCGATGTCAGTACAGGGGTGCCTGCAAAAGA
CACTCTGATGCTTAAGTTAGCACTGATGATGTCAGAGATTTAGAAAATAT
TTTAATGCGTATACTCCTTTTTACCTGTGGGTCCTACCTGGAGTGGGCCT
TTGGGCCCAAATACCTCTTTTGGTTGTTTCTGGATCTAGTGGCGATGGGT
GAAATTACTAAGAAGTTCCTCGAGAATCACTGGCAAGCGGTTGTGGGTCA
CGAATGCTGGATACCGCATACTCTGAAGGGTGTTCATAGTATGCAGTACC
CAGTAAGCGATCATGTGGATCTGAATGGCTGGGTACTTCTTGGTCGCTTA
GTCGTTTGGGTGACTATGGCTGGTTATGGGCTACTTGTTCTATACTCTGA
GGGCTCTTTGGCACAAAGTAGGCGGCCTAAGGGTGTTGTTAGTGGTTGCA
TACTATGTAATAAGGGAATCCTCAGTACAGAGTATGCGGCCTAGGGGGTT
GCTAGCGGCTGCATACTATACTGAGGGAATACTTAGTACGGAGTACGCGG
TCCAAGGGTTTGCTAGTGGCTACATACTATACTGAGGGGATACTCAATAC
GGAGTATGCGGCCCAAGGGTTTGCTAGTGGCTGCATACTATACTGAGGGG
ATACTCAGTACAGAGTATACGACACAGGGAGTTGCTAGTTGGCCGTGTAT
TATATGTGTGCCTTATAGTTGAGAATAGGTGGCCTGGGCAGGTTGCTCAC
TTGGCCGCATACCGTATACTATGCGCATTTGCCCTTGGTTCGTGGTATGG
TTGGGGTAGTTGGGACAGGATCTTCTAAGTAACTTCTCATTTTTCCATTT
TTTCATTTTTCTATATTCCAAAATTACTTAGAAGATGTCACTCCAGATTG
TAAGAGAAAGTTGTCAAACTTTAGTTGTAAAAACATCATTGTCCCTTTGA
TACTGTTTTCCAGCACATTTTCATTAGAGTATATTTTAGCTGATAAGTCT
AAGTACAAAAAGAATAACACTTGTGTTTGAACCATTCTAGAGAATTGCTC
TGGCATATTTGGTTGTGGCACTAGTGGAGATATTTTCAAGAAGTGCAGAA
GATAGAGATCCAGAACCCACCCAACTCTCAATATTCAAGTTGTACTATTG
GCATTGGTTAGTGTGTGAAAGTATGGTTCTGGTTAATTGATAATATTATA
TGCTTTTGAACATTTATTTGTTAAAATTTCAGGCTAGTGGGGGCTTGCAT
ACTTGCTGTTTACTTGGCTTTACTATATGGAATGTATGTTCCGGACTGGC
AATTCACTGTCCATAACCCAGACAGCATATACAATGGGACAACTTTTACT
GTAAGCTTCCCGTTGGTTGTCTCTCATACTCTCAAACACTATTGATACTC
TCTCTGTACACAAAAACACATGAAGTGGGAATATCAATAAAGTAGTATTT
GGTTTTAAATCCTGGTGATGATCTCACTTGAGCTCATGTTAAACACCAGT
GTGGACTGTATTATGGTTTTTGCATTAAATGAGTTTTTTTGTTTCATTCT
TGCTAGTTTTTAACATATTTACAGTTTTCTTTCTGTAAAAATAAGTATTA
GACACCGACACACACAACAATTATTGGTAAAATGTGTAAAATGTCCAATT
TGAAACACATTTTTTAGTCTCGAACATAATTTTGACATGGTTCCAACATA
ATATTAATAACTACGGATACAGTGGTTTTCTGAAAAACTTATGAACTTGT
AAATTTGTTACATAAGTTTTTATTATGATTATAGAAATAAGGAACAAATC
TGATATGATGACTACTTTTCACTTTTTGAATATTAGATATATATATTAGA
TTATTTTTTTATTAGCTGATAATTTGTTTGGATTATTATATTTGACTAAT
CTTATTTATAGATGATTTTGAGTATTTAAATACATAATGATCTAATATAT
TGATTTGTGTCCTTATGTCCTACATTTCGGAGATTAAAAGTGTCGAAGTG
TCCATATCTGTGTTAGTATATGTGCTACTTACTGTATTTCTAAATTTTTC
TCTGCTCTGGCTAATTTGTTTTCTCTGTCAATCTTAGGTGACCTGTGGTG
TCAGGGGAAAACTCGATCCCCCTTGTAATGTTGTGGGATATATTGACAGA
GAGGTGCTTGGAATCAACCACATGTATAAGCGTCCAGCGTGGAGAAGATC
TGAAGTGTGTTGCTATCTTCTACTCTAAAATTGAAAGACTTGCTCTATGT
CTGTAGGAATTTTCAGACACTAATTGCCTTTTGAGTGCTGCAGGCTTGCA
CAGAGAAATCCCCATATGAAGGACCTTTTAAAAGAAGTGCACCTTCATGG
TGTTATGCTCCTTTTGAGCCAGAAGGACTTTTAAGGTCTGTTTGTGATCT
CCAAACCCTCTTAGTGTGTATCTTTGTTTAGCTGAACTCACAAACATCCT
ATAAACAGACTTCAATCAGTTCTTGACAACGTTAGCTTTGTTTTATTTGA
AATAGATGCTGTCATTATATGTGATTAAATAATTGAAAATGACACTCATA
TTAGTAAGAAAGAGTTGAGAACTTCCATATTCACTCTTCCTTTGTTCAAC
TTCAGCAGCTTGGTTAGCGCAAGCCACTTGATTTTTTCTCAAAATTTTGA
AAATCTCAGTGACCCTTTTGAGGACTGTGTAAGATAATGAATTCACCTTT
GTATGTGTAACTTGTTCTGCGGATCCTAATAGCAAAGTAGGTGTAACTGC
AGCTCAATATCTGCTATTCTCTCCACAATCATTGGATTGCATTTTGGACA
TGTACTCGTACACTTACAGGTGAAGCCTTTTCACTCGAAGTAAAAAGTGC
TTGAAAATTACAATCCTTTAACACATGCTTACTCCTTCAATTTTGTGACT
TTAGGATCACTCTTCTAGGTTGAAGCACTGGATTCTCGTTGGCTTAACAC
TCCTTGGTTCAGGACTTATTCTTCACTTCACTCATGGTGTGAATTCTTAA
CTCAGTGTTGACTAAAACTTACCATGGAACTATTAGTTGCTTACTTTGAT
TTCACCCCTGCCTTCCATTTGTTGCAGCCATTCCTTTGAATAAACAGTTG
TACACACTAAGCTATGTTTGTGTGACATCTGGAGCAGCAGCATTAGTTTT
TTCAGCCTTCTACATTGTGGTATTTTATTCGTAATACTAGAAATTGTGCC
TTTCTTCTATTAAGGTCTTCTTCTAGTTTCTTTTTCAGTTCAGGTTTACC
CCTTTGATTAATGTCACACATTTCTCATATGGACGGATTTAGCATTATCC
TTGCAGGTTGATATTTGGGGTTTGACATTGTTGTTCTTGCCTTTGAAATG
GATTGGTATGAATGCCATGCTTGTTTATGTCATGGCAGCTGAAGGAATCT
TCGCAGGATTCATCAATGGGTGGTACTATGATGACCCTCATAATACACTG
GTAAATTCACATCCTCATAATGTCTTTTAGTTAAACCTCCATTTATTTGA
TAATTTCTGTAATTTTCTTTCGTATATTCGAATTTGATGAGGTTGTAACT
TTTTCGACAGACTTATTGGATACAAAAGCATGTCTTCATTAATGTTTGGC
ATTCGAAGAGAGTAGGAATCCTGTTGTATGTTATCTTTGCGGAGATCCTA
TTCTGGGCCTTTGTTGCAGGCATTTTGCACCGATTGGGTATATATTGGAA
GCTTTGAATTTCTTTTTTGTTTTTCTCAAAATCTGTTGCTATTATTATTA
TTATTTTACTGGGTGTCTGCGTAATTGTTGTATATTGTATTTGATGAATG
ACTGAAGAGCCATTTCAACTTGGAAACTTGTGTGTTGTTATCATTGATAC
AATAATTTGACTAAAAATTGTATATGACAAACTATTGAGATAAAACTCAA
GTGCAGTTACTCATCTTATAATCTCCCAATCAAAATTATACT back to topCoding sequence (CDS) from alignment at Vu06:22998427..23003968- >Vigun06g099500.2_Vu_IT97K-499-35_v1.1 ID=Vigun06g099500.2_Vu_IT97K-499-35_v1.1; Name=Vigun06g099500.2; organism=Vigna unguiculata; type=CDS; length=1119bp; location=Sequence derived from: Vu06:22998427..23003968- (Vigna unguiculata ATGGCCGAAATCAAAGGCGAACACAGCCTCAATGTTTCCGAAGCGCTTCC TCTTTCAGACACAAAGCTGCCTAAATCAAAGCGTGTCGCGTCGCTAGACA TCTTTCGCGGCCTCACTGTTGCGTTAATGATCTTGGTTGATGATGCCGGA GGGCAATGGCCTATGATTGGCCATGCGCCGTGGAATGGCTGCAACCTTGC TGATTTTGTGATGCCTTTCTTTTTGTTCATTGTGGGGATGGCCATTCCTC TGGCTCTCAAGAGAATACCAAATAGAGTTGTAGCTGTAAAAAAGGTTGTG GTTAGAACACTCAAACTCCTCTTCTGGGGATTGCTCTTGCAAGGTGGTTT CTCTCATGCTCCGGATAATCTAACATATGGTGTTGACATGAAACACATAA GGTGGTGTGGCATTCTTCAGAGAATTGCTCTGGCATATTTGGTTGTGGCA CTAGTGGAGATATTTTCAAGAAGTGCAGAAGATAGAGATCCAGAACCCAC CCAACTCTCAATATTCAAGTTGTACTATTGGCATTGGCTAGTGGGGGCTT GCATACTTGCTGTTTACTTGGCTTTACTATATGGAATGTATGTTCCGGAC TGGCAATTCACTGTCCATAACCCAGACAGCATATACAATGGGACAACTTT TACTGTGACCTGTGGTGTCAGGGGAAAACTCGATCCCCCTTGTAATGTTG TGGGATATATTGACAGAGAGGTGCTTGGAATCAACCACATGTATAAGCGT CCAGCGTGGAGAAGATCTGAAGCTTGCACAGAGAAATCCCCATATGAAGG ACCTTTTAAAAGAAGTGCACCTTCATGGTGTTATGCTCCTTTTGAGCCAG AAGGACTTTTAAGCTCAATATCTGCTATTCTCTCCACAATCATTGGATTG CATTTTGGACATGTACTCGTACACTTACAGGATCACTCTTCTAGGTTGAA GCACTGGATTCTCGTTGGCTTAACACTCCTTGGTTCAGGACTTATTCTTC ACTTCACTCATGCCATTCCTTTGAATAAACAGTTGTACACACTAAGCTAT GTTTGTGTGACATCTGGAGCAGCAGCATTAGTTTTTTCAGCCTTCTACAT TGTGGTATTTTATTCGTAA back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
Vocabulary: INTERPRO
Term | Definition |
IPR012429 | HGSNAT_cat |
|