Vigun06g153900.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: B561J_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g47530 OS=Arabidopsis thaliana OX=3702 GN=At5g47530 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.250e-40 Identity = 71/166 (42.77%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 76 CMNHTFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISESGGAPRAYTSSIQGYSTQLAEGNISYAISGLRATRENSEITIYATLTLPNGTTNLVH-LWQDGPLSASTPAQHQLATSNLQAKETFDLL 570 C N+ F+ N++F SC DLP L S+LH+TY+ ++ L +A+RH + +WVAWA+NP + + MVGAQA+VA +S G RAYTS I Y T L E +S+ +S L AT +N+E+ IYA L LP +++ +WQDG LS + P H + +N+++ T +L+ Sbjct: 27 CSNYKFSTNRLFESCNDLPVLDSFLHYTYDSSSGNLQIAYRHTKLTPG-KWVAWAVNPTS---TGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLEAELSFNVSQLSATYQNNEMVIYAILNLPLANGGIINTVWQDGSLSGNNPLPHPTSGNNVRSVSTLNLV 188
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: B651B_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g17280 OS=Arabidopsis thaliana OX=3702 GN=At4g17280 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.215e-40 Identity = 75/169 (44.38%), Postives = 107/169 (63.31%), Query Frame = 1 Query: 76 CMNHTFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISESGGAPRAYTSSIQGYSTQLAEGNISYAISGLRATRENSEITIYATLTLP-----NGTTNLVHLWQDGPLSASTPAQHQLATSNLQAKETFDL 567 C + F+ N VF SC DLP L S+LH+TYE +T L +A+RH + S +WVAWA+NP + + MVGAQA+VA +S G R YTS I+ Y T L EG++S+ +SGL AT +N+EI + A+L L GT N V WQDG +S ++ H + +N+++ T +L Sbjct: 34 CSKYKFSSNNVFDSCNDLPFLDSFLHYTYESSTGSLHIAYRHTKLT-SGKWVAWAVNPTS---TGMVGAQAIVAYPQSDGTVRVYTSPIRSYQTSLLEGDLSFNVSGLSATYQNNEIVVLASLKLAQDLGNGGTINTV--WQDGSMSGNSLLPHPTSGNNVRSVSTLNL 196
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: B561Q_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g48750 OS=Arabidopsis thaliana OX=3702 GN=At5g48750 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.453e-39 Identity = 73/167 (43.71%), Postives = 103/167 (61.68%), Query Frame = 1 Query: 76 CMNHTFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISES-GGAPRAYTSSIQGYSTQLAEGNISYAISGLRATRENSEITIYATLTLPNGTTNLVHLWQDGPLS-ASTPAQHQLATSNLQAKETFDLL 570 C +H F + K F SC DLP L S+LH++Y + T L++A+RH I +S W+AW INP + M+GAQ L+A S G RAYTSSI GY+ L EG +S+ ++ L A N E+TI+AT+ P+ TT + HLWQDGPL H ++ ++L++ DLL Sbjct: 34 CDSHNFNNGKHFRSCVDLPVLDSFLHYSYVRETGVLEVAYRHTNIESSS-WIAWGINPTSK---GMIGAQTLLAYRNSTSGFMRAYTSSINGYTPMLQEGPLSFRVTQLSAEYLNREMTIFATMVWPSNTTVVNHLWQDGPLKEGDRLGMHAMSGNHLKSMANLDLL 196
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: B561H_ARATH (Cytochrome b561 and DOMON domain-containing protein At3g59070 OS=Arabidopsis thaliana OX=3702 GN=At3g59070 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.843e-36 Identity = 74/167 (44.31%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 76 CMNHTFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISES-GGAPRAYTSSIQGYSTQLAEGNISYAISGLRATRENSEITIYATLTLPNGTTNLVHLWQDGPLS-ASTPAQHQLATSNLQAKETFDLL 570 C +++F + K F SC DL L SYLH+ Y Q T L++A+ H+ + +S W++WAINP + MVGAQALVA S G RAYTSSI YS L E +S ++ + A N E+ I+ATL LP TT + HLWQDGPL H ++ NL++ + DLL Sbjct: 37 CESYSFNNGKSFRSCTDLLVLNSYLHFNYAQETGVLEIAYHHSNLESSS-WISWAINPTSK---GMVGAQALVAYRNSTSGVMRAYTSSINSYSPMLQESPLSLRVTQVSAEYSNGEMMIFATLVLPPNTTVVNHLWQDGPLKEGDRLGMHAMSGDNLKSMASLDLL 199
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: B561P_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana OX=3702 GN=At5g35735 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.232e-35 Identity = 68/165 (41.21%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 76 CMNHTFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISESG-GAPRAYTSSIQGYSTQLAEGNISYAISGLRATRENSEITIYATLTLPNGTTNLVHLWQDGPLSASTPAQHQLATSNLQAKETFDL 567 C H FT+N F C DL L S+LHWTY + + +A+RH G +AS WVAW +NP++ + MVG QALVA + + +AYTSS+ Y T+L ++S+ +SGL AT + E+TI+ATL L LWQ GP+ PA HQ + N+++ D Sbjct: 29 CNTHRFTNNLAFADCSDLSALGSFLHWTYNEQNGTVSIAYRHPGTSASS-WVAWGLNPSS---TQMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSLSFGVSGLSATLVSGEVTIFATLELSPNLITANQLWQVGPVVNGVPASHQTSGDNMRSSGRIDF 189
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: AIR12_ARATH (Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana OX=3702 GN=AIR12 PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 2.616e-22 Identity = 57/167 (34.13%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 76 CMNHTFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISESGG-APRAYTSSIQGYSTQLAEGNISYAISGLRA-TRENSEITIYATLTLPNGTTNLVHLWQ-DGPLSASTPAQHQLATSNLQAKETFDL 567 C + F SC DLP L SYLH+TY + + L +AF A+ WVAWAINP + M G+QA +A GG AP T +I YS+ L EG +++ LRA + I I+ T+ +P G ++ +WQ G ++ P H NL + Sbjct: 29 CKSQNLNSAGPFDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINPT---GTKMAGSQAFLAYRSGGGAAPVVKTYNISSYSS-LVEGKLAFDFWNLRAESLSGGRIAIFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLGSHRVLSF 191
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: B561C_ARATH (Cytochrome b561 and DOMON domain-containing protein At3g25290 OS=Arabidopsis thaliana OX=3702 GN=At3g25290 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.466e-16 Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 76 CMNHTFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISESG-GAPRAYTSSIQGYSTQLAEGNISYAISGLR---ATRENSEITIYATLTLP-----NGTTNLVHLWQDGPL--SASTPAQHQLATSNLQAKETFDL 567 C + TF+ +K + C DLP L ++LH++Y+ + L + F A W+AWAINP + MVG+Q LVA + G G T +I YS+ L +++ + ++ A R+ + I+A + +P G N +WQ GP +H ++NL + + DL Sbjct: 28 CKSQTFSGDKTYPHCLDLPQLKAFLHYSYDASNTTLAVVFS-APPAKPGGWIAWAINPK---ATGMVGSQTLVAYKDPGNGVAVVKTLNISSYSS-LIPSKLAFDVWDMKAEEAARDGGSLRIFARVKVPADLVAKGKVN--QVWQVGPELGPGGMIGRHAFDSANLASMSSLDL 195
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: B561O_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis thaliana OX=3702 GN=At4g12980 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.588e-12 Identity = 52/170 (30.59%), Postives = 85/170 (50.00%), Query Frame = 1 Query: 88 TFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISE-SGGAPRAYTSSIQGYSTQLAEGNISYAISGLRATR---ENSEITIYATLTLP-----NGTTNLVHLWQDGPLSASTPAQ-HQLATSNLQAKETFDL 567 TF+ K + C DLP L + LH++Y+ + L + F A + W+AWAINP ++ M G+QALVA + S G T +I YS+ L +S+ + ++A + + I+A + +P +G N +WQ GP ++ Q H + NL + + DL Sbjct: 33 TFSGVKSYPHCLDLPDLKAILHYSYDASNTTLAVVFS-APPSKPGGWIAWAINPK---STGMAGSQALVASKDPSTGVASVTTLNIVSYSS-LVPSKLSFDVWDVKAEEAANDGGALRIFAKVKVPADLAASGKVN--QVWQVGPGVSNGRIQAHDFSGPNLNSVGSLDL 195
BLAST of Vigun06g153900.1 vs. DB:Swiss
Match: B561G_ARATH (Cytochrome b561 and DOMON domain-containing protein At2g04850 OS=Arabidopsis thaliana OX=3702 GN=At2g04850 PE=2 SV=2) HSP 1 Score: 62.3882 bits (150), Expect = 1.635e-10 Identity = 46/176 (26.14%), Postives = 78/176 (44.32%), Query Frame = 1 Query: 88 TFTDNKVFTSCRDLPHLTSYLHWTYEQATAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISESGGAPRAYTSSIQGYSTQLAEGNI-------------SYAISG--LRATRENSEITIYATLTLPNGTTNLVHLWQDGP-LSASTPAQHQLATSNLQAKETFDL 567 T T K F C LP + + WTY A LD+ F I+ S WV W INP++ + M G++ L+A + + S +L +G + S ++ G + R + + IYA++ L + T + H+W G + +P H +++L + TFD+ Sbjct: 27 TTTATKSFEKCISLPTQQASIAWTYHPHNATLDLCFFGTFISPSG-WVGWGINPDS--PAQMTGSRVLIAFPDPNSGQLILLPYVLDSSVKLQKGPLLSRPLDLVRLSSSSASLYGGKMATIRNGASVQIYASVKLSSNNTKIHHVWNRGLYVQGYSPTIHPTTSTDLSSFSTFDV 199 The following BLAST results are available for this feature:
BLAST of Vigun06g153900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 9
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun06g153900.1_Vu_IT97K-499-35_v1.1 ID=Vigun06g153900.1_Vu_IT97K-499-35_v1.1; Name=Vigun06g153900.1; organism=Vigna unguiculata; type=mRNA; length=1086bpback to top protein sequence of Vigun06g153900.1_Vu_IT97K-499-35_v1.1 >Vigun06g153900.1_Vu_IT97K-499-35_v1.1 ID=Vigun06g153900.1_Vu_IT97K-499-35_v1.1; Name=Vigun06g153900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=191bpback to top mRNA from alignment at Vu06:27792280..27793822+ Legend: mRNAfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun06g153900.1_Vu_IT97K-499-35_v1.1 ID=Vigun06g153900.1_Vu_IT97K-499-35_v1.1; Name=Vigun06g153900.1; organism=Vigna unguiculata; type=mRNA; length=1543bp; location=Sequence derived from: Vu06:27792280..27793822+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu06:27792280..27793822+ >Vigun06g153900.1_Vu_IT97K-499-35_v1.1 ID=Vigun06g153900.1_Vu_IT97K-499-35_v1.1; Name=Vigun06g153900.1; organism=Vigna unguiculata; type=CDS; length=573bp; location=Sequence derived from: Vu06:27792280..27793822+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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