Vigun06g230600.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.340e-32 Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 82 ALFVVGGRDGWTTTVSSWT-AQVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQKGSSYFISSIPGDCQAGTKVSVT 360 A++VVGG GWT SW + ++AGD LLF Y+P HNVVVV+QGG+++C PAGAK Y +G D I+L KG SYFI + PG CQ+G K++V Sbjct: 1 AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVN 94
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.866e-27 Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 67 DMAHAALFVVGGRDGWTTTVSSWTA-QVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQKGSSYFISSIPGDCQAGTKVSVT 360 ++A + ++ VG GWT S W A + ++AGD L+F Y+P HNVV V GGY SCTA G++ + +G D I L +G++YFI S+PG CQ G K++VT Sbjct: 26 EVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKIAVT 124
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 3.948e-24 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 67 DMAHAALFVVGGRDGWTTTVSSW-TAQVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQKGSSYFISSIPGDCQAGTKVSVT 360 D AA + VG WT W + ++AGD L+F Y+P+ HNVV VD G YN+C P GAK Y +G D I L KG ++FI + P C++ K++VT Sbjct: 29 DYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKIAVT 127
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.296e-17 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 79 AALFVVGGRDGWTTTV----SSW-TAQVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQK-GSSYFISSIPGDCQAGTKVSVTV 363 A + VG GWTT V + W ++ + GD LLF Y+ K HNV+ VDQ + SC + + A +Y +G D I L++ G+ YF+ IPG CQ G KV + V Sbjct: 1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: UCC1_ARATH (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 8.902e-12 Identity = 34/94 (36.17%), Postives = 49/94 (52.13%), Query Frame = 1 Query: 94 VGGRDGWTT--TVSSWTA-QVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQL-QKGSSYFISSIPGDCQAGTKVSVTV 363 +GG GWT ++ +W A Q + GD L+F Y H+VV V + ++SC A T+ G+ + L G YFI +PG C G K+ V V Sbjct: 28 IGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNV 121
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: STEL_TOXVR (Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 7.923e-11 Identity = 29/75 (38.67%), Postives = 39/75 (52.00%), Query Frame = 1 Query: 142 QVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQK-GSSYFISSIPGDCQAGTKVSVTV 363 + + GD L+F YD + HNV V Q Y SC +YNTG + I L+ G Y+I +P C G KV + V Sbjct: 29 KTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: BCP_PEA (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 3.801e-9 Identity = 35/100 (35.00%), Postives = 50/100 (50.00%), Query Frame = 1 Query: 79 AALFVVGGRDGWTT--TVSSWTA-QVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQK-GSSYFISSIPGDCQAGTKVSVTVQ 366 A ++ VG GW S+W + + + GD L+F Y H V V + Y SCT+ T +TG I L+K G YFI +PG G K+S+ V+ Sbjct: 24 ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK 123
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana OX=3702 GN=At2g44790 PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 9.987e-9 Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 112 WTTTV--SSW-TAQVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQK-GSSYFISSIPGDCQ--AGTKVSVTV 363 WTT V S W T + ++ GD L F Y H V VVD+ GY+ C A + + ++ G I L+ G +YFI S PG C+ G K++V V Sbjct: 36 WTTGVDYSGWATGKTFRVGDILEFKYG-SSHTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNV 124
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 1.294e-8 Identity = 36/107 (33.64%), Postives = 52/107 (48.60%), Query Frame = 1 Query: 70 MAHAALFVVGGRDG-WTTTVSS------WTAQV-YKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQK-GSSYFISSIPGDCQAGTKVSVTV 363 +A A VGG+ G W SS W + +K GD ++F Y+ K +V+ V + YNSC Y G ++L + G YFIS G C+ G K+S+ V Sbjct: 25 LAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV 131
BLAST of Vigun06g230600.1 vs. DB:Swiss
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.396e-8 Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 79 AALFVVGGRDGWTTTV--SSW-TAQVYKAGDKLLFYYDPKKHNVVVVDQGGYNSCTAPAGAKTYNTGHDYIQLQK-GSSYFISSIPGDCQAGTKVSVTV 363 AA F VG GWT+ + + W T + ++ GD L F Y H+V VVD+ GY++C + + + G I L G+ +F+ G C+ G K++V V Sbjct: 21 AATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYG-LSHSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPV 118 The following BLAST results are available for this feature:
BLAST of Vigun06g230600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun06g230600.1_Vu_IT97K-499-35_v1.1 ID=Vigun06g230600.1_Vu_IT97K-499-35_v1.1; Name=Vigun06g230600.1; organism=Vigna unguiculata; type=mRNA; length=369bpback to top protein sequence of Vigun06g230600.1_Vu_IT97K-499-35_v1.1 >Vigun06g230600.1_Vu_IT97K-499-35_v1.1 ID=Vigun06g230600.1_Vu_IT97K-499-35_v1.1; Name=Vigun06g230600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=123bpback to top mRNA from alignment at Vu06:33727644..33728282+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun06g230600.1_Vu_IT97K-499-35_v1.1 ID=Vigun06g230600.1_Vu_IT97K-499-35_v1.1; Name=Vigun06g230600.1; organism=Vigna unguiculata; type=mRNA; length=639bp; location=Sequence derived from: Vu06:33727644..33728282+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu06:33727644..33728282+ >Vigun06g230600.1_Vu_IT97K-499-35_v1.1 ID=Vigun06g230600.1_Vu_IT97K-499-35_v1.1; Name=Vigun06g230600.1; organism=Vigna unguiculata; type=CDS; length=369bp; location=Sequence derived from: Vu06:33727644..33728282+ (Vigna unguiculataback to top |