Vigun07g066300.1
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL1_ARATH (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.559e-60 Identity = 130/269 (48.33%), Postives = 166/269 (61.71%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNLRVSATPTP---APPGFTLSTPSEF------SNKRGRGKHTAFGN----YQLFSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSFTQNA-HKSQKKKYQREQQTVVSPTSAVPETVTFARPISQANAEGENFLMPMSQIPDQTQRESVSVSSDKQN 1035
KKKRGRPRKY DG + V+ +P P AP L PS S KR + K T N + + GE + G+F PH++TV TGEDV KI+SF+Q+GPR IC+LSANG IS+VT+RQP SSGG LTYEGRFEILSLSGSF D+ G +SRTGG+SVSLA PDGRV+GGG+AGLL AA P+Q+VVGSF H+ QK K + + SPT+A+P ++A + +S +P S++SD +N
Sbjct: 89 KKKRGRPRKYGPDGTV-VALSPKPISSAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTDHQDQKPKKNKHDFMLSSPTAAIP----------ISSAADHRTIHSVSSLPVNNNTWQTSLASDPRN 346
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL10_ARATH (AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AHL10 PE=1 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 3.270e-51 Identity = 107/199 (53.77%), Postives = 134/199 (67.34%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNLRVSATPTPAPPGFTLSTPSEFSN----KRGRGKHTAFGNYQLFSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSFTQNAHKSQKK 855
KK+RGRPRKY D +S P P FT+S PS + KRGR ++ +L + +T G F PHV+TV GEDV+ KI++ GPR +C+LSANGAISNVT+RQ +SGG +TYEGRFEILSLSGSF + +N+G +SRTGGLSVSL+ PDG V+GG VAGLL AA P+QIVVGSF + K K+
Sbjct: 97 KKRRGRPRKYGPDSG-EMSLGLNPGAPSFTVSQPSSGGDGGEKKRGRPPGSSSKRLKL-----QALGSTGIG-FTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGEKEPKQ 288
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL9_ARATH (AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL9 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.025e-50 Identity = 101/208 (48.56%), Postives = 140/208 (67.31%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNLRVSATPTPAPPGFTLSTPSEFSNKRGRGKHTAFGNYQLFSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSFTQNAHKSQKKKYQREQQTVVSPT 894
K+KRGRPRKY DG++ ++ + + + TP+ SNKRGRG+ G Q +S GE+ +++ F PHV+ V GED+A K+++F+Q+GPR IC+LSA+GA+S T+ QP +S G + YEGRFEIL+LS S+ VA + ++RTG LSVSLA PDGRVIGG + G L AA P+Q++VGSF A K + KK + E VV T
Sbjct: 98 KRKRGRPRKYGQDGSVSLALSSSSV----STITPNN-SNKRGRGRPPGSGKKQRMASVGELMPSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAIKYEGRFEILALSTSYIVATDGSFRNRTGNLSVSLASPDGRVIGGAIGGPLIAASPVQVIVGSFIWAAPKIKSKKREEEASEVVQET 300
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL3_ARATH (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.619e-50 Identity = 110/206 (53.40%), Postives = 135/206 (65.53%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNLRVSATPTPAPPGFTLSTPSEFS-NKRGRGK---HTAFGNYQLF----SSFGEVFANTAAGDFI-----PHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSFTQNAHKSQ 849
KKKRGRPRKY+ DG L V+ +P P L+ SEF KRGRG+ + Q+F S A DF+ PHV+ V GEDV KI++F+Q+G R ICILSANG ISNVT+RQ +SGG LTYEGRFEILSL+GSF D+ G +SR GG+SV LAGPDGRV GGG+AGL AAGP+Q++VG+F +SQ
Sbjct: 86 KKKRGRPRKYNPDGTLVVTLSPMPISSSVPLT--SEFPPRKRGRGRGKSNRWLKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVNAGEDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRSRAGGMSVCLAGPDGRVFGGGLAGLFLAAGPVQVMVGTFIAGQEQSQ 289
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL7_ARATH (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.093e-49 Identity = 118/215 (54.88%), Postives = 140/215 (65.12%), Query Frame = 1 Query: 268 GKKKRGRPRKYDADGNLRVSATPTPAPPGFTLSTPSEFSNKRGRGKHTAFGNYQL-----FSSFGEVFANTAA------GDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSF-TQNAHKSQKKKYQREQQ 876
GKK+RGRPRKY+A+G P P S+ KR RGK F ++ F S GE F +F PHV+TV TGED+ +I+SF+Q+GPR ICILSANG ISNVT+RQP S GG LTYEGRFEILSLSGSF +N G K R+GG+SVSLAGPDGRV+GGGVAGLL AA PIQ+VVGSF T + QK + QR +
Sbjct: 55 GKKRRGRPRKYEANG------APLP-------SSSVPLVKKRVRGKLNGFDMKKMHKTIGFHSSGERFGVGGGVGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQPDSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGGMSVSLAGPDGRVVGGGVAGLLIAATPIQVVVGSFITSDQQDHQKPRKQRVEH 256
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL2_ARATH (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.819e-49 Identity = 110/218 (50.46%), Postives = 145/218 (66.51%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNLRVSATPTP----APPGFTLSTPSEFSNKRGRGKH-----TAF--GNYQLFSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSFTQNAHKSQKKKYQREQQTVVSP 891
KK+RGRPRKY DG V+ +P P AP + S S KRG+ K ++F YQ+ + GE ++AA +F PH++TV GEDV +I+SF+Q+G IC+L ANG +S+VT+RQP SSGG LTYEGRFEILSLSG+F +D+ G +SRTGG+SVSLA PDGRV+GGGVAGLL AA PIQ+VVG+F ++ ++ + SP
Sbjct: 72 KKRRGRPRKYGHDG-AAVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPSSFIRPKYQV-ENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGVVSSVTLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAATPIQVVVGTFLGGTNQQEQTPKPHNHNFMSSP 287
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL11_ARATH (AT-hook motif nuclear-localized protein 11 OS=Arabidopsis thaliana OX=3702 GN=AHL11 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.775e-45 Identity = 96/204 (47.06%), Postives = 129/204 (63.24%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNLRVSATPTPAPPGFTLSTPSEFSNKRGRGKHTAFGNYQLFSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSFTQNAHKSQKKKYQREQQTV 882
K+KRGRPRKY DG VS +P ++S S SNKRGRG+ G Q SS GE+ ++ F PHV+ V GED+A K++SF+ +GPR IC+LSA+GA+S T+ QP S G + YEG FE++SLS S+ ++ +RTG L+VSLA PDGRVIGGG+ G L AA +Q++VGSF K + KK + + V
Sbjct: 101 KRKRGRPRKYGQDGG-SVSLALSP-----SISNVSPNSNKRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIVVSIGEDIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYEGLFELISLSTSYLNTTDNDYPNRTGSLAVSLASPDGRVIGGGIGGPLIAASQVQVIVGSFIWAIPKGKIKKREETSEDV 298
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL5_ARATH (AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL5 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.238e-42 Identity = 84/168 (50.00%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNLRVSATPTPAPPGFTLSTPSEF---SNKRGRGKHTAFGNYQLFSSFGEVFANTAAG-DFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVI 762
KKKRGRPRKY DG + + +P P + + S + KR RG+ G Q ++ GE + NT+AG F PHV++V +GED+ K+LSF+QK PR +CI+S G +S+VT+R+P S+ LT+EGRFEILSL GS+ V + G KSRTGGLSVSL+GP+G VI
Sbjct: 105 KKKRGRPRKYVPDGQVSLGLSPMPCVSKKSKDSSSMSDPNAPKRARGRPPGTGRKQRLANLGE-WMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTLREPASTTPSLTFEGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSGPEGHVI 271
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL4_ARATH (AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL4 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.037e-41 Identity = 104/218 (47.71%), Postives = 132/218 (60.55%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNLRVSATPTPAPPGFTLSTPSEFSNKRGRGKHTA--------------------------FGNYQLF-------SSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSF 825
KKKRGRPRKY+ DG+L V+ +P P L+ SEF +++ N Q+F +S G A + F PHV+TV GEDV KI++F+Q+G R ICILSANG ISNVT+RQ +SGG LTYEG FEILSL+GSF +++ G +SR GG+SVSLAG DGRV GGG+AGL AAGP+Q++VGSF
Sbjct: 78 KKKRGRPRKYNPDGSLAVTLSPMPISSSVPLT--SEFGSRKRGRGRGRGRGRGRGRGQGQGSREPNNNNNDNNWLKNPQMFEFNNNTPTSGGGGPAEIVSPSFTPHVLTVNAGEDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGGTRSRAGGMSVSLAGQDGRVFGGGLAGLFIAAGPVQVMVGSF 293
BLAST of Vigun07g066300.1 vs. DB:Swiss
Match: AHL6_ARATH (AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL6 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.701e-41 Identity = 115/292 (39.38%), Postives = 159/292 (54.45%), Query Frame = 1 Query: 271 KKKRGRPRKYDADGNL-----RVSATPTPAPPGFTLSTPSEFSNKRGRGKH----TAFGNYQLFSSFGEV--------FANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIXXXXXXXXXXXXPIQIVVGSF--TQNAHKSQKKKYQREQQ----------------------TVVSPTSAVPETVTFARPISQANAEGENFLMPMSQIPDQTQRESVSVSS 1023
KKKRGRPRKY DG+L R + +PTP LS ++ KRG+ + F +G + +F H TV GEDV K++ ++Q+G R ICILSA G+ISNVT+ QP ++GG LTYEGRFEILSLSGSF +N G K R GG+S+SLAGP+G + GGG+AG+L AAGP+Q+V+GSF A ++QKKK + + T V+ TS TV +P A G + PM+Q+P Q ++ ++++
Sbjct: 76 KKKRGRPRKYAPDGSLNPRFLRPTLSPTPISSSIPLS--GDYQWKRGKAQQQHQPLEFVKKSHKFEYGSPAPTPPLPGLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAICILSATGSISNVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGGTKGRAGGMSISLAGPNGNIFGGGLAGMLIAAGPVQVVMGSFIVMHQAEQNQKKKPRVMEAFAPPQPQAPPQLQQQQPPTFTITTVNSTSPSVNTVEEQKP----QAYGGGIVRPMAQMPSSFQNDNSTMNN 361 The following BLAST results are available for this feature:
BLAST of Vigun07g066300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun07g066300.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g066300.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g066300.1; organism=Vigna unguiculata; type=mRNA; length=1831bpback to top protein sequence of Vigun07g066300.1_Vu_IT97K-499-35_v1.1 >Vigun07g066300.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g066300.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g066300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=378bpback to top mRNA from alignment at Vu07:7749333..7753694- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun07g066300.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g066300.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g066300.1; organism=Vigna unguiculata; type=mRNA; length=4362bp; location=Sequence derived from: Vu07:7749333..7753694- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu07:7749333..7753694- >Vigun07g066300.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g066300.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g066300.1; organism=Vigna unguiculata; type=CDS; length=1134bp; location=Sequence derived from: Vu07:7749333..7753694- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|