Vigun07g104300.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 1.898e-114 Identity = 191/254 (75.20%), Postives = 201/254 (79.13%), Query Frame = 1 Query: 1 MVFEETELRLGLGLPGNGXXXXXXXXXXXXXXGVRKRGFSETET-----ETTTVDLKLNLSPKEVSSADGT--DPRNKPNTSPKEKTXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKKMVEESEKNNSPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAI--GLAPRAMEKCKNRS 735 M FEETELRLGL PGNG T +RKRGFSETET TTVDL LNLS KE ++ DP +K T PKEKTLL DPAKPPAK QVVGWPPVR+FRKNM A QK + EESEKN+SPNASFVKVSMDGAPYLRKVDLKMY SY +LSD+LGKMFSSFT GNCESQG KDFMNESKL DLLNSSD VPTYED+DGDWMLVGDVPWEMFVESCKRLRIMKGKEAI GLAPRAM KCKNRS Sbjct: 1 MGFEETELRLGL--PGNGGTEEVL---------IRKRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAAADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 1.329e-84 Identity = 146/258 (56.59%), Postives = 165/258 (63.95%), Query Frame = 1 Query: 7 FEETELRLGLGLPGNGXXXXXXXXXXXXXXGVRKRGFSETETETTTVDLKLNLSPKEVSSADGTDPRNKPNTSPKEKTXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKKMVEESEKNNS---------------PNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 735 FE TELRLGL PG KRGFSET VDLKLNLS + S D N KEK + P A QVVGWPPVR+FRKN+ + QK ++ + N ++VKVSMDGAPYLRK+DLK+Y +Y LS+AL KMFSSFTIGN QG KDFMNESKL+DLLN SD VPTYED+DGDWMLVGDVPWEMFV+SCKR+RIMKG EAIGLAPRA+EKCKNRS Sbjct: 4 FEATELRLGL--PGGNHGGEMAGKNNG------KRGFSET------VDLKLNLSSTAMDSVSKVDLENM-----KEKVVKPPAKA------QVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2) HSP 1 Score: 253.832 bits (647), Expect = 3.502e-84 Identity = 151/247 (61.13%), Postives = 167/247 (67.61%), Query Frame = 1 Query: 1 MVFEETELRLGLGLPGNGXXXXXXXXXXXXXXGV-RKRGFSETETETTTVDLKLNLSPKEVSSADGTDPRNKPNTSPKEKTXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKK-MVEESEKNNSPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 735 M +ETEL LGLPG + A GV KRGFSET VDLKLNL + D N +PKEKT L P QVVGWPPVR +RKN+ A QK EE+ + +FVKVSMDGAPYLRKVDLKMY SY LSDAL KMFSSFT+G+ +QG DFMNESK+MDLLNSS+ VP+YED+DGDWMLVGDVPW MFVESCKRLRIMKG EAIGLAPRAMEK KNRS Sbjct: 1 MNLKETEL--CLGLPGG-----TETVESPAKSGVGNKRGFSET------VDLKLNLQSNKQGHVDLNT-----NGAPKEKTFLKDPSKPPAKA-QVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 1.567e-80 Identity = 146/246 (59.35%), Postives = 163/246 (66.26%), Query Frame = 1 Query: 28 LGLGLPGNGXXXXXXXXXXXXXXGVRKRGFSETETETTTVDLKLNLSPKEVSSADGTDPRNKPNTSPKEKTXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKKMVEESEKNN---------SPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEK-CKNRS 735 L LGLPG P +A + KRGFSET VDL LNL S+ +G+ + PKEKT L P QVVGWPPVR +RKNM QK E ++ + A VKVSMDGAPYLRKVDLKMY SY LSDAL KMFSSFT+GN +QG DFMNESKLM+LLNSS+ VP+YED+DGDWMLVGDVPWEMFVESCKRLRIMKG EA+GLAPRAMEK CKNRS Sbjct: 13 LCLGLPGGAEAVESPAKSAVGS----KRGFSET------VDLMLNLQ----SNKEGSVDLKNVSAVPKEKTTLKDPSKPPAKA-QVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS 243
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.572e-75 Identity = 148/284 (52.11%), Postives = 169/284 (59.51%), Query Frame = 1 Query: 1 MVFEETELRLGLGLPGNGXXXXXXXXXXXXXXGVRKRGFSETETETTTVDLKLNLSPK----------------------EVSSADGTDPRNKPNT-------SPKEK---TXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKKMVEESE-------KNNSPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 735 + FE TELRLGL PG G AA ++ G KRGF+ET +DLKL L P ++ AD D SP + T K QVVGWPPVR++RKN+ A Q +++ + A+FVKVSMDGAPYLRKVDLKMY SY +LS AL KMFSSFTIGNC S G + MNESK+ DLLN S+ VPTYED+DGDWMLVGDVPWEMFVESCKRLRIMKG EAIGLAPRAMEKCKNRS Sbjct: 5 LAFEATELRLGL--PGGGGDGDAAAAAARSSSG--KRGFAET------IDLKLKLEPAAAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGV-NGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.644e-74 Identity = 137/240 (57.08%), Postives = 166/240 (69.17%), Query Frame = 1 Query: 19 ELRLGLGLPGNGXXXXXXXXXXXXXXGVRKRGFSETETETTTVDLKLNLSPKEVSSADGTDPRNKPNTSPKEKTXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKKMVEESEKNNSPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIG-NCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 735 E L LGLPG A KRGFSET VDLKLNL+ E ++ +G+ + KEK+ DPAKPPAK QVVGWPPVR++RKN+ + +K E A+FVKVSMDGAPYLRK+DL+MY SY +LS+AL MFSSFT+G + +G DFMNE KLMDL+NS D VP+YED+DGDWMLVGDVPW MFV++CKRLR+MKG +AIGLAPRAMEKCK+R+ Sbjct: 11 ETELCLGLPGGDTVAPVTG---------NKRGFSET------VDLKLNLN-NEPANKEGSTTHDVVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEA-----AAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA 229
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA11 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 6.823e-65 Identity = 125/261 (47.89%), Postives = 147/261 (56.32%), Query Frame = 1 Query: 7 FEETELRLGLGLPGNGXXXXXXXXXXXXXXGVRKRGFSETETETTTVDLKLNLSPKEVSSADGTD--------------------PRNKPNTSPKEKTXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKKMVEESEKNNSPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKN 729 F+ETELRLGL PG G A KRGF+ET +DLKL L P ++ G + + + T K QVVGWPPVR+FRKN+ A + K A+ VKVSMDGAPYLRK+D+ MY SYP+LS A MF+SFTIG C S + +KL D L + VPTYED+DGDWMLVGDVPWEMFVESCKRLRIMKG EAIGLAPRA+EKCK+ Sbjct: 6 FDETELRLGL--PGAGELAARSSG---------KRGFAET------IDLKLKLQPAAPAAVSGEEGAQEDKEDADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEKCK-----------AAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSH--QQLKESNKLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKS 233
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.264e-62 Identity = 112/219 (51.14%), Postives = 145/219 (66.21%), Query Frame = 1 Query: 106 KRGFSETETE----TTTVDLKLNLSPKEVSSADGTDPRNKPNTSPK-EKTXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKKMVEESEKNNSPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGF--KDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGL--APRAMEKCKNRS 735 KRGFS+T + ++V + N E ++ ++ P PK + + + P AK Q+VGWPPVR++RKN A K +E + A FVKVSMDGAPYLRKVDL+ Y +Y +LS AL KMF++FT+G C S G KD ++E+KL DLLN D V TYED+DGDWMLVGDVPWEMF++ CK+L+IMKG +AIGL APRAMEK K R+ Sbjct: 120 KRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMRA 338
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 7.129e-61 Identity = 111/213 (52.11%), Postives = 135/213 (63.38%), Query Frame = 1 Query: 130 TETTTVDLKLNLSPKEVSSADG-TDPRNKPNTSPKEKTXXXXXXXXXXXXEQVVGWPPVRAFRKNMFAAQKKM-------VEESEKNNSPNAS--FVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGF--KDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNR 732 + T T D+ P+ DG + KP KEK P +K QVVGWPP+R+FRKN A+ + EE+E + P +VKVSM+GAPYLRK+DLK Y SY +LS AL KMFS FTIG S G +D +NES+L DLL S+ V TYED+D DWMLVGDVPWEMF+ SCK+LRIMK EAIGLAPR MEKC++R Sbjct: 95 STTATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEK---KSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSR 304
BLAST of Vigun07g104300.1 vs. DB:Swiss
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.871e-58 Identity = 108/225 (48.00%), Postives = 143/225 (63.56%), Query Frame = 1 Query: 106 KRGFSETETETTTVD--------LKLNLSPK--EVSSA---DGTDPRNKPNTSPKEKTXXXXXXXXXXXXEQVVGWPPVRAFRKN-MFAAQKKMVEESEKNNSPNASFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGF--KDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNR 732 KRGF++T E + V + + LSPK +VS + + + + N +P K QVVGWPP+R++RKN M ++ K +E + FVKVSMDGAPYLRKVDL+ Y SY QLS AL KMFS FT+G C G ++ M+E KL DLL+ S+ V TYED+DGDWMLVGDVPWE+F E+C++L+IMKG ++IGLAP A+EK KN+ Sbjct: 107 KRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKA-------------QVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318 The following BLAST results are available for this feature:
BLAST of Vigun07g104300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun07g104300.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g104300.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g104300.1; organism=Vigna unguiculata; type=mRNA; length=1413bpback to top protein sequence of Vigun07g104300.1_Vu_IT97K-499-35_v1.1 >Vigun07g104300.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g104300.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g104300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=246bpback to top mRNA from alignment at Vu07:19036245..19038793+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun07g104300.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g104300.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g104300.1; organism=Vigna unguiculata; type=mRNA; length=2549bp; location=Sequence derived from: Vu07:19036245..19038793+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu07:19036245..19038793+ >Vigun07g104300.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g104300.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g104300.1; organism=Vigna unguiculata; type=CDS; length=738bp; location=Sequence derived from: Vu07:19036245..19038793+ (Vigna unguiculataback to top |