Vigun07g107200.1

Transcript Overview
NameVigun07g107200.1
Unique NameVigun07g107200.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2185
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu07supercontigVu07:19713169..19717244 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL038Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR358Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL247Pisum sativum Cameor genome v1aPisum sativum
psvuL559Pisum sativum Cameor genome v1aPisum sativum
crvuL300Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL048Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL369Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL629Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL223Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0340Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL302Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL309Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0397Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0306Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0809Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0681Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0843Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0909Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1135Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL384Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR484Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR510Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR527Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL397Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL369Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL650Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL607Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL263Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL624Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL528Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL790Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR341Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR364Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR373Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL200Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL267Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL324Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL404Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL223Cicer arietinum
carvuL287Cicer arietinum
ccavuL222Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL320Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR569Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR590Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR596Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR627Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR590Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR599Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR643Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL369Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL579Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL390Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL585Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL049Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL554Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR397Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR423Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR426Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR429Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr01.1008Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va03G069420.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.08G196000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-KK1_029667Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_04G02159.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr01.1333Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.04G302700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-TanjilR_11460Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.5g120120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_08G00554.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_03573.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Tiffany.R1.5g096600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_032372Cajanus cajan Asha genome v1.0Cajanus cajan
jg32641.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_09537.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
XM_058882016.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va02G043000.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cr_06028.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_07804Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_12181Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_24585Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat3g062280.1Pisum sativum Cameor genome v1aPisum sativum
Psat06G0555700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.001G154400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014640046.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat03G0217200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr07.1132Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_014657471.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Ca_09035.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_08G02718.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr07.536Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004493666.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_012714273.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
XM_058918609.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Tiffany.R1.3g052560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vum_08G01793.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr07.2610Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan02g120700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.007G174400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigan.08G232500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058889987.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-TanjilR_01960Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_07308.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
jg1974.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigst.04G191100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat06G0164100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.3g063400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g136800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun07g235700.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun01g136800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun07g107200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun07g003900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun07g235700.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun07g107200Vigun07g107200_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g107200.1Vigun07g107200.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun07g107200.1_Vu_IT97K-499-35_v1.1Vigun07g107200.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g107200.1.v1.1.CDS.7Vigun07g107200.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g107200.1.v1.1.CDS.6Vigun07g107200.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g107200.1.v1.1.CDS.5Vigun07g107200.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g107200.1.v1.1.CDS.4Vigun07g107200.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g107200.1.v1.1.CDS.3Vigun07g107200.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g107200.1.v1.1.CDS.2Vigun07g107200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g107200.1.v1.1.CDS.1Vigun07g107200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g107200.1.v1.1.three_prime_UTR.1Vigun07g107200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g107200.1.v1.1.five_prime_UTR.1Vigun07g107200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
BLAST of Vigun07g107200.1 vs. DB:Swiss
Match: VAB_ARATH (VAN3-binding protein OS=Arabidopsis thaliana OX=3702 GN=VAB PE=1 SV=1)

HSP 1 Score: 401.364 bits (1030), Expect = 1.007e-134
Identity = 312/486 (64.20%), Postives = 368/486 (75.72%), Query Frame = 1
Query:   19 VNCDRNESLKTRTG--THLPESPRVPMEFLSRSWSASALEVSKALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKSEEFSATMCANQFSFASSATSQLVLDRIMSQSTREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRAMSGGTGNA--TPC--SGPKTVGRWLXXXXXXXXXXNRSHNAQLHXXXXXXXXXXXXXXXXXXXXXXXXXXKDEKMA---MSVASAATLVAAQCVEAAEAMGAERDHLXXXXXXXXXXXXHDDISXXXXXXXXXXXXXXXXXXXXXXEVWNINAVTPLEKGAGIXXXXXXXXXXXXXXXXXEI-MNGENLLGACNQEFLARGTALLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCTNLAAWPGRDLVDEGEERRYFGLKTEARGVVEFECRNQREYDIWTQGVSRLLSIVARRQN 1446
            +N  R   + +  G  T LPESPR PMEFLSRSWS SALEVS+AL       +   P      P        E+         ++T  ++QFSFA+SATSQLVL+RIMSQS   EVSPLTSGRLSHSS PLNGG S T TDSPPISPSDEFDDV+K+FR +N+IHPLF+G     G TGN   TP   +GPKTVGRWLK+R+EKKKEE R+ NAQ+HAAVSVAAVA+AVAAV AATAA+S   K+E+MA   M++ASAA LVAAQCVEAAE MGA+RDHL SVVSSAVNV+SHDDI TLTAAAATALRGAATLKARALKEVWNI AV P EKGA    CG+    +S +S SGE+ + GE+ LG CNQE LA+GT LLKRTR G+LHWKIVSVYI++ GQ +LKMKS+HV GT TKKKK++VL+V  ++ AW GRDL + G++  YFGLKTE + V+EFECRNQREY+IWTQGVSRLL+I A ++ 
Sbjct:   11 INSSRRPEIFSSGGSSTQLPESPRGPMEFLSRSWSVSALEVSRALHTAKSASATNRPPSSINTPIPEETLNPEKEECPPE---NSTSVSSQFSFAASATSQLVLERIMSQS---EVSPLTSGRLSHSSGPLNGGGSFTETDSPPISPSDEFDDVIKYFRTHNTIHPLFSGTGGSRGTTGNGSNTPMAGTGPKTVGRWLKDRKEKKKEETRTQNAQVHAAVSVAAVASAVAAVAAATAASSPG-KNEQMARIDMAMASAAALVAAQCVEAAEIMGADRDHLTSVVSSAVNVKSHDDIVTLTAAAATALRGAATLKARALKEVWNIAAVLPAEKGASSALCGQVDTKHSDSSFSGELPVAGEDFLGVCNQELLAKGTELLKRTRGGELHWKIVSVYINKAGQAVLKMKSKHVGGTFTKKKKHMVLEVRKDIPAWAGRDLFN-GDKHHYFGLKTETKRVIEFECRNQREYEIWTQGVSRLLAIAAEKKQ 488          
The following BLAST results are available for this feature:
BLAST of Vigun07g107200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
VAB_ARATH1.007e-13464.20VAN3-binding protein OS=Arabidopsis thaliana OX=37... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008546Domain of unknown function DUF828PFAMPF05703Auxin_canaliscoord: 24..330
e-value: 3.6E-104
score: 348.2
IPR013666Pleckstrin-like, plantPFAMPF08458PH_2coord: 373..477
e-value: 8.1E-41
score: 138.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun07g107200.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g107200.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g107200.1; organism=Vigna unguiculata; type=mRNA; length=2185bp
AACTTATCCTATATCTTATTTATTTTATTCACATGTTTTCCCTCTTTATC
TTTTCCACTTAATAGAAAGATGATATTTTTTTCAATGTTAACAAACCATT
AGAGCTATTGCAATAAAAAAAAAAATGCTCAAGTGGTTCGTAGAGGTAAA
AACGAATTCTTCAATTTAAAATACCATTAGAGTGGGGTTGATTGAGAAAC
AATCGCATAAAAATGACTCTTGTACCAGGATGTGGACGGGTGAAATTATT
TATTGTTGCTTTTAATATAAGGTGAATAGATGAATGTAGATACGTGAACC
TCAACCAAACAGGGTACTGAAATAATATTACCTTTCTACCACAAAGTGTA
AACATATACTTTTAAGTTCTTAAGCGATTTTACCATTAAAGCGTTACTGA
TTTTAAAATCTGCTGCGTATATTAAGCCCCACTGAAAATGACTTCAGCAC
AAAAAGAAAATGTACCATTGGACATGTTCTTACACACTCCTGCTTCTTCA
AAGATTCCACTGTATATATAAATACCACCCCATAAGGAAACGAACCCACC
TCTCTAAGCTTCAAACTTGTTAGACATGGAACCCAAGTTCACAGTGAATT
GTGACCGAAACGAGTCGCTCAAAACCAGAACTGGTACTCATTTGCCAGAG
AGCCCAAGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGC
TCTTGAGGTCTCCAAAGCCCTTGcaccaccaccaccacctccTTCTTATT
ACATACCTTCCAAGCCTCCCATTATACCCTCTTCTATCACCAACTCCATT
TCCGAAGAAACTTCTTCTGCTAAGTCAGAGGAGTTCTCAGCCACCATGTG
CGCCAACCAGTTCTCTTTTGCTTCCTCCGCCACTTCACAGCTCGTCCTTG
ACCGCATTATGTCACAGTCAACTAGAGAGGAAGTGTCTCCATTAACGTCA
GGGAGATTGTCCCACAGCAGTGAACCTTTGAACGGTGGTGCTTCTTTAAC
TGGAACGGACAGTCCACCAATCTCTCCTTCTGACGAGTTTGACGATGTTG
TCAAGTTTTTTCGGGCAAACAACTCCATTCATCCCTTATTCAATGGTGGA
CGAGCCATGAGTGGTGGTACAGGGAATGCCACTCCTTGTTCCGGACCTAA
AACAGTAGGAAGATGGTTgaaagaaagaagagaaaagaagaaagaagaaa
acagaaGCCATAATGCTCAACTTCATGCTGCAGTTTCTGTTGCCGCCGTA
GCAGCTGCAGTTGCAGCTGTCACTGCCGCAACGGCAGCCACTTCTGCAGC
TAGCAAGGATGAGAAGATGGCCATGTCCGTTGCTTCTGCGGCCACTTTAG
TCGCTGCTCAGTGTGTAGAGGCTGCTGAAGCCATGGGAGCTGAGAGAGAT
CACCTTGCTTCTGTCGTTAGCTCTGCCGTCAATGTCCGTTCTCATGATGA
TATTTCAACACTTACAGCTGCAGCTGCCACAGCTCTACGTGGGGCAGCAA
CCTTGAAAGCAAGAGCATTGAAGGAGGTGTGGAATATTAACGCAGTGACT
CCATTAGAGAAAGGAGCAGGTATTGGAAAATGTGGTAAAAGCAAAAACAG
TAATTCTAGCACCAGTGACAGTGGGGAGATTATGAATGGTGAAAATTTGT
TGGGTGCATGCAACCAAGAGTTCCTTGCTAGGGGCACTGCATTACTCAAA
CGGACACGCAAAGGTGATCTTCACTGGAAAATAGTTTCGGTTTATATACA
TCGAACAGGCCAGGTAATGCTGAAAATGAAGAGCAGACACGTTGCAGGAA
CTATCACGAAAAAGAAAAAGAATGTGGTGTTGGATGTGTGCACAAATTTA
GCAGCATGGCCAGGACGGGACCTGGTTGATGAAGGTGAAGAAAGAAGGTA
CTTTGGATTGAAAACAGAAGCAAGGGGAGTTGTGGAGTTTGAATGCAGAA
ATCAAAGAGAATATGATATTTGGACTCAAGGGGTTTCTAGACTTCTTTCC
ATAGTTGCACGCAGACAAAACCTAACCTAACACTGTTTCTACTGCTTCAT
TGTTCAATCTATATGTATGTATTTTGCTGTATCTTACTTTCTTTAACACA
AACTCATGGATTTTGTAACTAAACAATGAACAAATTGCTTATTTTCAGTG
TTATGCATTCATGGATAGTGTTTCATTTTCTCTAA
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protein sequence of Vigun07g107200.1_Vu_IT97K-499-35_v1.1

>Vigun07g107200.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g107200.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g107200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=485bp
MEPKFTVNCDRNESLKTRTGTHLPESPRVPMEFLSRSWSASALEVSKALA
PPPPPPSYYIPSKPPIIPSSITNSISEETSSAKSEEFSATMCANQFSFAS
SATSQLVLDRIMSQSTREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPIS
PSDEFDDVVKFFRANNSIHPLFNGGRAMSGGTGNATPCSGPKTVGRWLKE
RREKKKEENRSHNAQLHAAVSVAAVAAAVAAVTAATAATSAASKDEKMAM
SVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDISTLTAAA
ATALRGAATLKARALKEVWNINAVTPLEKGAGIGKCGKSKNSNSSTSDSG
EIMNGENLLGACNQEFLARGTALLKRTRKGDLHWKIVSVYIHRTGQVMLK
MKSRHVAGTITKKKKNVVLDVCTNLAAWPGRDLVDEGEERRYFGLKTEAR
GVVEFECRNQREYDIWTQGVSRLLSIVARRQNLT*
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mRNA from alignment at Vu07:19713169..19717244-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun07g107200.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g107200.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g107200.1; organism=Vigna unguiculata; type=mRNA; length=4076bp; location=Sequence derived from: Vu07:19713169..19717244- (Vigna unguiculata
AACTTATCCTATATCTTATTTATTTTATTCACATGTTTTCCCTCTTTATC TTTTCCACTTAATAGAAAGATGATATTTTTTTCAATGTTAACAAACCATT AGAGCTATTGCAATAAAAAAAAAAATGCTCAAGTGGTTCGTAGAGGTAAA AACGAATTCTTCAATTTAAAATACCATTAGAGTGGGGTTGATTGAGAAAC AATCGCATAAAAATGACTCTTGTACCAGGATGTGGACGGGTGAAATTATT TATTGTTGCTTTTAATATAAGGTGAATAGATGAATGTAGATACGTGAACC TCAACCAAACAGGGTACTGAAATAATATTACCTTTCTACCACAAAGTGTA AACATATACTTTTAAGTTCTTAAGCGATTTTACCATTAAAGCGTTACTGA TTTTAAAATCTGCTGCGTATATTAAGCCCCACTGAAAATGACTTCAGCAC AAAAAGAAAATGTACCATTGGACATGTTCTTACACACTCCTGCTTCTTCA AAGATTCCACTGTATATATAAATACCACCCCATAAGGAAACGAACCCACC TCTCTAAGCTTCAAACTTGTTAGACATGGAACCCAAGTTCACAGTGAATT GTGACCGAAACGAGTCGCTCAAAACCAGAACTGGTACTCATTTGCCAGAG AGCCCAAGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGC TCTTGAGGTCTCCAAAGCCCTTGCACCACCACCACCACCTCCTTCTTATT ACATACCTTCCAAGCCTCCCATTATACCCTCTTCTATCACCAACTCCATT TCCGAAGAAACTTCTTCTGCTAAGTCAGAGGAGTTCTCAGCCACCATGTG CGCCAACCAGTTCTCTTTTGCTTCCTCCGCCACTTCACAGCTCGTCCTTG ACCGCATTATGTCACAGTCAACTAGAGAGGTGTTCCTTCACCATCTCACA TTGTTTTTCTTTCATACAAAAGTTCTATAGTTTTGTTTTTTTCACCTCGT TTTGGTTTGGACATGACTGAATGTGTAATGTTTGAGACAGGAAGTGTCTC CATTAACGTCAGGGAGATTGTCCCACAGCAGTGAACCTTTGAACGGTGGT GCTTCTTTAACTGGAACGGACAGTCCACCAATCTCTCCTTCTGACGAGTT TGACGATGTTGTCAAGGTATCTCTCTGTTCCTTTCCTCTTTCTTTTCCAC CTAGGTGGGACCCTCACAAGTACAATAATATTTTTGTAACTATTCTCTCA CTTTTCTTCTTCTTTGTTCCTCTTCCCAATCTCACTTTTCAATGCTGCTG TATCTTTCTTGCTTCCTAAAACTATGCTAAGTGTGTAATAATAGTATATT TCAGCAGTTATTTTTGAAATGCTGGATGTGCTTTAAATTAGCCTTAAACA TGTTTAACTGATTTCGATAATATCCATGTGGGGGCGTTGCTATTACTGTG TTGATTTATTATGGAAAAGATTGTTTGCTAGTGTCTGTACTTACAAAAAG CTTTGATTTTTTTCTTTTTTTATCTGTCTTTAGGTGTCAGATTACTGTTT TTTTAACTTTCTTTTTCTTGCTTATAAATAATTGTAGAAAAGACTTTCTT CATAAAACTTGAATTACATTAGGATTTTAGGAGGGTTACTATCATGTTCA CCTGCACCCTAAAGAAAAAAACTGTAAAAATAATTTACTAAAGAAAGGAA CTTGAGGGCCCCAACTGATTTTAGTTTCCATGGCTGCATGGAAGAAATAT CTGTGTTCATGGCTATTCAACATTTTTCATGAGTTAGTAAAATCACCTCT ACTTTATTTGACCCACTATCACACCTAAAGAAGGTGGTAGAGCCTAAAGT TGTGGAGGGGTTATGACTTTTCATTGAAAAGATGAAAATTTTGAAGTTTG AATGGGACCTGGTGAGTGTTGAACTGTTGAAGTGGGTAATGACGCACGCT GCTATTGTTACTGATACGGTTTCCAGTTAAGTTATCTTACCTGCCAGGTG ATTGCCTCACAACAGGACAAAGGTTTTGACTGTTCAGTGTACCTTATCTT CGCATTCACGCAAACAAAACAATCTTCTTATTTTGGAAATTTTGCTAGCA GATACAAAAAGTTCAATTTGTCCTTTTTACTAGAAAGGAACCGAAGCTAG AGTTGGCACAGGAAAAGACTAGTAGGATTTTCTCTGCAAGTCCAAAATCT GTTTAATGTTCTTACCCATATCACAGGAACTATTAAATGAAAGATTGGTC GAATTAGATTCTTCTAAATCATGCTGAAATAGCAATTATGTTTCTTTTTA ATCTGAATTTAAACAATTTTAGATATTTTTACACTTAAAGGAAATTTTAT GTTAAAGCTTTAAAAATCAGTTTAGCCAACGATGGAGAACAATTTGATAA TGTTGTATGAATCTACTGCAGTTTTTTCGGGCAAACAACTCCATTCATCC CTTATTCAATGGTGGACGAGCCATGAGTGGTGGTACAGGGAATGCCACTC CTTGTTCCGGACCTAAAACAGTAGGAAGATGGTTGAAAGAAAGAAGAGAA AAGAAGAAAGAAGAAAACAGAAGCCATAATGCTCAACTTCATGCTGCAGT TTCTGTTGCCGCCGTAGCAGCTGCAGTTGCAGCTGTCACTGCCGCAACGG CAGCCACTTCTGCAGCTAGCAAGGATGAGAAGATGGCCATGTCCGTTGCT TCTGCGGCCACTTTAGTCGCTGCTCAGTGTGTAGAGGCTGCTGAAGCCAT GGGAGCTGAGAGAGATCACCTTGCTTCTGTCGTTAGCTCTGCCGTCAATG TCCGTTCTCATGATGATATTTCAACACTTACAGCTGCAGCTGCCACAGGT AAACTTTACCACTCTTATCATTACGAGTTCAATGATCCTGAACTAACACC TTTCAGAAACTCTTCTTAAGTGACTTGAATAAAGGTTTTGTTAGATTGAA TTAGACAAAGTTCACTTTTTAACATGGTATAAGAGTTATTTAAAGCTTAT CCTAATTAAGTTGCATTAACGGTAAAGAACCAAGTAGGATCTGTAGTTTC ATTGTTGATTGATCCCTTAAGAAGGAGGTGAATGTGATCCTTGAATGTGC AGCTCTACGTGGGGCAGCAACCTTGAAAGCAAGAGCATTGAAGGAGGTGT GGAATATTAACGCAGTGACTCCATTAGAGAAAGGAGCAGGTATTGGAAAA TGTGGTAAAAGCAAAAACAGTAATTCTAGCACCAGTGACAGTGGGGAGAT TATGAATGGTGAAAATTTGTTGGGTGCATGCAACCAAGAGTTCCTTGCTA GGGGCACTGCATTACTCAAACGGACACGCAAAGGTAATTTCAGTGACTGA CAAACACAGCTATAGATCAGCAAAATGGAATTTTTCTCTTATTTACAGAA TTATTCAACTCAATTTTGGTGATTGCTGTAGGTGATCTTCACTGGAAAAT AGTTTCGGTTTATATACATCGAACAGGCCAGGTATTTTTATTCTTCAAAT ATTGATATCAGATGGAATTGAATATGTGTCCATTATTCATCACAATGCAA GCAACAATTTCAGGTAATGCTGAAAATGAAGAGCAGACACGTTGCAGGAA CTATCACGAAAAAGAAAAAGAGTAATCAATCACCTAATACTAGCCCAACA GCATATCCTTGGAAGCCATAAAAGCAGTTGATCATAACTTTTGGTTTAAA TTGTATTTGCAGATGTGGTGTTGGATGTGTGCACAAATTTAGCAGCATGG CCAGGACGGGACCTGGTTGATGAAGGTGAAGAAAGAAGGTACTTTGGATT GAAAACAGAAGCAAGGGGAGTTGTGGAGTTTGAATGCAGAAATCAAAGAG AATATGATATTTGGACTCAAGGGGTTTCTAGACTTCTTTCCATAGTTGCA CGCAGACAAAACCTAACCTAACACTGTTTCTACTGCTTCATTGTTCAATC TATATGTATGTATTTTGCTGTATCTTACTTTCTTTAACACAAACTCATGG ATTTTGTAACTAAACAATGAACAAATTGCTTATTTTCAGTGTTATGCATT CATGGATAGTGTTTCATTTTCTCTAA
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Coding sequence (CDS) from alignment at Vu07:19713169..19717244-

>Vigun07g107200.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g107200.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g107200.1; organism=Vigna unguiculata; type=CDS; length=1455bp; location=Sequence derived from: Vu07:19713169..19717244- (Vigna unguiculata
ATGGAACCCAAGTTCACAGTGAATTGTGACCGAAACGAGTCGCTCAAAAC
CAGAACTGGTACTCATTTGCCAGAGAGCCCAAGAGTACCAATGGAGTTTC
TGTCAAGATCATGGAGTGCCTCTGCTCTTGAGGTCTCCAAAGCCCTTGCA
CCACCACCACCACCTCCTTCTTATTACATACCTTCCAAGCCTCCCATTAT
ACCCTCTTCTATCACCAACTCCATTTCCGAAGAAACTTCTTCTGCTAAGT
CAGAGGAGTTCTCAGCCACCATGTGCGCCAACCAGTTCTCTTTTGCTTCC
TCCGCCACTTCACAGCTCGTCCTTGACCGCATTATGTCACAGTCAACTAG
AGAGGAAGTGTCTCCATTAACGTCAGGGAGATTGTCCCACAGCAGTGAAC
CTTTGAACGGTGGTGCTTCTTTAACTGGAACGGACAGTCCACCAATCTCT
CCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGGGCAAACAACTC
CATTCATCCCTTATTCAATGGTGGACGAGCCATGAGTGGTGGTACAGGGA
ATGCCACTCCTTGTTCCGGACCTAAAACAGTAGGAAGATGGTTGAAAGAA
AGAAGAGAAAAGAAGAAAGAAGAAAACAGAAGCCATAATGCTCAACTTCA
TGCTGCAGTTTCTGTTGCCGCCGTAGCAGCTGCAGTTGCAGCTGTCACTG
CCGCAACGGCAGCCACTTCTGCAGCTAGCAAGGATGAGAAGATGGCCATG
TCCGTTGCTTCTGCGGCCACTTTAGTCGCTGCTCAGTGTGTAGAGGCTGC
TGAAGCCATGGGAGCTGAGAGAGATCACCTTGCTTCTGTCGTTAGCTCTG
CCGTCAATGTCCGTTCTCATGATGATATTTCAACACTTACAGCTGCAGCT
GCCACAGCTCTACGTGGGGCAGCAACCTTGAAAGCAAGAGCATTGAAGGA
GGTGTGGAATATTAACGCAGTGACTCCATTAGAGAAAGGAGCAGGTATTG
GAAAATGTGGTAAAAGCAAAAACAGTAATTCTAGCACCAGTGACAGTGGG
GAGATTATGAATGGTGAAAATTTGTTGGGTGCATGCAACCAAGAGTTCCT
TGCTAGGGGCACTGCATTACTCAAACGGACACGCAAAGGTGATCTTCACT
GGAAAATAGTTTCGGTTTATATACATCGAACAGGCCAGGTAATGCTGAAA
ATGAAGAGCAGACACGTTGCAGGAACTATCACGAAAAAGAAAAAGAATGT
GGTGTTGGATGTGTGCACAAATTTAGCAGCATGGCCAGGACGGGACCTGG
TTGATGAAGGTGAAGAAAGAAGGTACTTTGGATTGAAAACAGAAGCAAGG
GGAGTTGTGGAGTTTGAATGCAGAAATCAAAGAGAATATGATATTTGGAC
TCAAGGGGTTTCTAGACTTCTTTCCATAGTTGCACGCAGACAAAACCTAA
CCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008546VAN3-bd-like_auxin_canal
IPR013666PH_pln