Vigun08g010600.1

Transcript Overview
NameVigun08g010600.1
Unique NameVigun08g010600.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1450
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:911848..913680 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR378Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL470Pisum sativum Cameor genome v1aPisum sativum
psvuL622Pisum sativum Cameor genome v1aPisum sativum
pvvuL057Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL434Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL531Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL778Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL779Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL337Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0474Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL407Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0582Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL691Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0233Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1133Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0115Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0318Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0364Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0484Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0743Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0753Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0919Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL198Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL690Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL708Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR581Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR594Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR608Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL299Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL278Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL452Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL423Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL390Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL439Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL393Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL560Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR399Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL376Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL473Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL592Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL324Cicer arietinum
carvuL397Cicer arietinum
ccavuL432Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL549Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL552Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR657Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR662Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR677Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR691Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR703Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR715Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL227Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL242Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL295Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL685Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR466Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR470Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vum_02G00098.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat05G0046700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan09g028900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vum_02G00267.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058929670.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_014647982.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014644800.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004499156.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat05G0013800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigan.02G030900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_15166.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_03G02037.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cr_07761.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-KK1_031803Cajanus cajan Asha genome v1.0Cajanus cajan
Vigan.03G287500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va04G069550.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr08.619.1.6211316eVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.03G184900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
PvulFLAVERTChr01.1000088Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_08665.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.009G014100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va07G070660.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr09.1264Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat06G0014400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.001G009700.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.02G025900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cc_v2.0_10951.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
XM_058869360.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_14960.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_10766Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.3g234480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g191240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan07g282200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
PvulFLAVERTChr09.200Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058929419.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-KK1_033650Cajanus cajan Asha genome v1.0Cajanus cajan
jg35129.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_31033Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g268800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun08g010600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g268800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun09g250600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g250600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g010600Vigun08g010600_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g010600.1_Vu_IT97K-499-35_v1.1Vigun08g010600.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide
Vigun08g010600.1Vigun08g010600.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g010600.1.v1.1.CDS.3Vigun08g010600.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g010600.1.v1.1.CDS.2Vigun08g010600.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g010600.1.v1.1.CDS.1Vigun08g010600.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g010600.1.v1.1.three_prime_UTR.1Vigun08g010600.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g010600.1.v1.1.five_prime_UTR.1Vigun08g010600.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: BBX21_ARATH (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.680e-72
Identity = 152/336 (45.24%), Postives = 192/336 (57.14%), Query Frame = 1 
Query:    1 MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLRPKQH----PLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGVKLXXXXXXXXXXXXXX---------XAPDSLFHVSNQKTI--PLSSTVSKVGVEAMGS-----------ASASSISEYLIETLPGWQVEDFLDSYSVAFGFSKS---DEALPRFDGDMESHLG--------------SFSTENVGIWVPQAXXXXXXXXQMNRVIGQNETNNI------------------------KGSSRSRLKDD-NFTVPQISPQ--SNSKRGRFLW 798
            MKI+CDVC+K +ASVFCTADEA LC GCDH++HHANKLASKH RFSLL P       PLCD+CQ+++A  FCQQDRAILC++CD SIH+ANEHT KHDRFLLTGVKLSA+SS  +  S S+         S P S   +SN   +  PLS+      ++                S S+ISEYL++TLPGW VEDFLDS    +GFSKS   D  LP  + + +++                S  ++N+GIWVPQ P  L SS   N+   Q+  NNI                        +G +  R  DD  FTVPQI+P   S++K+ R  W
Sbjct:    1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGS--SISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISEYLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDGVLPYMEPEDDNNTKRNNNNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYP-NQYFSQD--NNIQFGMYNKETSPEVVSFAPIQNMKQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRSFW 331
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: BBX20_ARATH (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 7.886e-51
Identity = 107/202 (52.97%), Postives = 125/202 (61.88%), Query Frame = 1 
Query:    1 MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLRP--KQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGVKLXXXXXXXXXXXXXXXAPDSLFHVSNQKTIPLSSTVSK-------------------VGVE---------AMGSASASSISEYLIETLPGWQVEDFLD 516
            MKI C VC+K +ASVFC ADEA LC+GCD  +H ANKLA KH RFSL  P  K  PLCD+C ERRA  FCQ+DRAILCRECD+ IH ANEHT KH+RFLLTGVK+SAS S+    S SNSA  + F  +  +   +SS V                      G+E           GS    SISEYL+ETLPGW+VED L+
Sbjct:    1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNSA--AAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGCTGSISEYLMETLPGWRVEDLLE 200
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 6.285e-36
Identity = 61/104 (58.65%), Postives = 72/104 (69.23%), Query Frame = 1 
Query:    1 MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSL-LRPKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGVKL 309
            MKIQC+VC   +A+V C ADEA LC  CD +IH ANKLA KHQR  L       P CD+CQE   F FC QDRA+LCR+CDV+IH+ N H   H RFLLTG+K+
Sbjct:    1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.254e-35
Identity = 63/104 (60.58%), Postives = 73/104 (70.19%), Query Frame = 1 
Query:    1 MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLR-PKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGVKL 309
            MKIQCDVC K  A+V C ADEA LC  CD  IH ANKLASKHQR  L     + P CD+CQE+ AF FC +DRA+LCR+CD SIH AN  +  H RFL TG+K+
Sbjct:    1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKV 104
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.596e-31
Identity = 93/261 (35.63%), Postives = 131/261 (50.19%), Query Frame = 1 
Query:    1 MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSL-LRPKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGVKLXXXXXXXXXXXXXXXAPDSLFHVSNQKTIPLSSTVSKVGVEAMGSASASSISEYLIETLPGWQVEDFLDSYSVAFGFSKSDEALPRFDGDMESHLGSFSTENVGIWVPQAXXXXXXXXQM------NRVIGQNETNNIKG-SSRSRLKDDNFTVPQI 759
            MKIQCDVC K  A++ C ADEA LC  CD  +H ANKLASKHQR  L     + P CD+C E+ AF FC +DRA+LCR+CD + H+ N  +  H RFL TG++++ SS+S       N      F  SNQ+++      SK   +   + S            P W  ++F  SYS     +K  E L   + D  + +G F  +     +P A  P LS S +      NR +  N  N  +    R   ++++F VP +
Sbjct:    1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNH-----FDPSNQQSL------SKPPTQQPAAPS------------PLWATDEFF-SYSDLDCSNKEKEQLDLGELDWLAEMGLFGDQPDQEALPVAEVPELSFSHLAHAHSYNRPMKSNVPNKKQRLEYRYDDEEEHFLVPDL 237
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: BBX23_ARATH (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.980e-30
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 1 
Query:    1 MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLR-------PKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGVKL 309
            MKIQC+VC K +A V C +DEAVLC  CD ++H ANKL  +H R +L +           PLCD+CQER+ + FC +DRA+LC +CD +IH+ N     H RFLL+GV++
Sbjct:    1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGAPLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQV 106
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: BBX19_ARATH (B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.951e-24
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 1 
Query:    1 MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLRPKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLL 294
            M+I CD C    A +FC ADEA LC  CD ++H  NKLAS+H R  L  P   P CD+C+   AF +C+ D + LC +CD+ +H   + T  H RFLL
Sbjct:    1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HGRFLL 96
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: BBX18_ARATH (B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.381e-22
Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 1 
Query:    1 MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLRPKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLL 294
            M+I CD C    A VFC ADEA LC  CD ++H  NKLAS+H R  L  P   P CD+C+   AF +C+ D + LC +CD+ +H   + T  H RFLL
Sbjct:    1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HRRFLL 96
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.846e-18
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 1 
Query:   13 CDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLRPKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLT 297
            CD C    A++FC AD A LC  CD +IH ANKLAS+H+R          LC+VC++  A   C+ D A LC  CD  IHSAN  + +H+R  +T
Sbjct:    8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVW--------LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94
[Close]
BLAST of Vigun08g010600.1 vs. DB:Swiss
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 3.969e-16
Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = 1 
Query:   13 CDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLRPKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLT 297
            CD C    A+++C  D A LC  CD ++H ANKLAS+H R          +C+VC++  A   C+ D A LC  CD  IHSAN    +H+R  +T
Sbjct:    6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVW--------MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
The following BLAST results are available for this feature:
BLAST of Vigun08g010600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
BBX21_ARATH6.680e-7245.24B-box zinc finger protein 21 OS=Arabidopsis thalia... [more]
BBX20_ARATH7.886e-5152.97B-box zinc finger protein 20 OS=Arabidopsis thalia... [more]
BBX22_ARATH6.285e-3658.65B-box zinc finger protein 22 OS=Arabidopsis thalia... [more]
BBX24_ARATH7.254e-3560.58B-box zinc finger protein 24 OS=Arabidopsis thalia... [more]
BBX25_ARATH1.596e-3135.63B-box zinc finger protein 25 OS=Arabidopsis thalia... [more]
BBX23_ARATH1.980e-3049.09B-box zinc finger protein 23 OS=Arabidopsis thalia... [more]
BBX19_ARATH5.951e-2445.92B-box zinc finger protein 19 OS=Arabidopsis thalia... [more]
BBX18_ARATH1.381e-2246.94B-box zinc finger protein 18 OS=Arabidopsis thalia... [more]
COL3_ARATH2.846e-1845.26Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis... [more]
COL4_ARATH3.969e-1641.05Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 51..98
e-value: 9.0E-12
score: 55.1
coord: 4..47
e-value: 9.0E-6
score: 35.2
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 52..92
e-value: 2.9E-6
score: 27.3
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 1..47
score: 10.509
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 51..98
score: 10.239
IPR000315B-box-type zinc fingerCDDcd00021BBOXcoord: 54..98
e-value: 6.00052E-10
score: 51.5191
IPR000315B-box-type zinc fingerCDDcd00021BBOXcoord: 3..47
e-value: 1.21706E-5
score: 39.578
NoneNo IPR availableGENE3D3.30.40.200coord: 1..93
e-value: 1.2E-7
score: 34.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..266

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g010600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g010600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g010600.1; organism=Vigna unguiculata; type=mRNA; length=1450bp
TTTGATTGGAGAGACAATAGAAAATTCCCATCTTAGACTATTAAGGTTTC
TAAAAATCAACAAAACTAAATCTTAAAAAACTCTTTGAGGTTGTTTCCAT
CTCCAACGAAAGTAGTATATTTTCTTTCTCTTTTGAGGAAAAAATCTACA
GCAAGAAGAAGAAGAagtgaacgagtgagtgagtgagtgggtgagtTATG
ACGATTTGACCATATTTATGCATCTCAATCACTTCCCACTTTTCATAAGC
ATTACACAACTAAACCCCACGCTTCCTTTATTCTCCTTCTTCTCAAAACT
TCACTTCATTCTCTCACACAAAAAAAAAAAAAATCAAACCTTTAAACCAT
GAAGATCCAATGCGACGTGTGTAACAAACACGATGCATCGGTCTTTTGCA
CCGCCGATGAAGCCGTCCTCTGCGACGGCTGCGACCACCGCATCCACCAC
GCCAACAAACTCGCCTCCAAACACCAACGTTTCTCTCTTCTTCGACCCAA
ACAACACCCTCTCTGCGATGTTTGTCAGGAGAGAAGAGCCTTCACGTTCT
GTCAGCAAGATAGGGCGATTCTGTGCAGAGAGTGTGACGTGTCGATTCAC
TCTGCGAACGAACACACCCTTAAGCATGATAGGTTCCTTCTCACTGGTGT
GAAACTTTCTGCTTCTTCTTCATCGCAGGAAACCCCTTCTCCTTCAAACT
CTGCCCCTGATTCTCTTTTTCACGTTTCGAATCAAAAAACAATACCTTTA
TCTTCCACCGTGAGTAAGGTTGGTGTTGAAGCAATGGGTTCCGCAAGTGC
TAGCAGCATATCGGAGTATCTGATAGAGACTCTTCCTGGGTGGCAGGTTG
AAGACTTTCTCGATTCATATTCTGTTGCCTTTGGTTTCTCCAAGAGTGAT
GAAGCGTTGCCACGGTTTGATGGTGACATGGAGAGTCATCTGGGTTCTTT
CTCAACAGAGAACGTGGGAATATGGGTTCCTCAAGCGCCGCCACCTCTTC
TGAGTTCTTCACAGATGAACAGAGTGATTGGTCAAAACGAAACCAACAAC
ATCAAAGGTAGCAGCAGATCGAGGTTGAAGGATGATAATTTCACTGTGCC
ACAGATTAGTCCTCAGTCAAATTCCAAGAGAGGAAGGTTTCTGTGGTAGA
AACAAAAGAAGCCTCAGTTTCCATATCTCATGAGCAAGAACAACCTCTTT
CTTTTGTTTTGTTCTTAGGTTACTCTGTCAATGTTTTTAATTTAGTTCTG
TGTTCTTCCTCCTTCATCTTTCCCTGCTGGTTTTTTGGTTTTTGATGAAT
CTGTGTAACTTTCTGCTGGTGATTGTAAATACAAACTTTTCCAAATGCAT
GTTATTTTTGACACATGTTTAGAAGGGAAAAAGTGTTATATGCAGAGAGA
ATGTAATGTAAGACATCTCCATCATCTCATACATTTTAAGACCATAATTG
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protein sequence of Vigun08g010600.1_Vu_IT97K-499-35_v1.1

>Vigun08g010600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g010600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g010600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=267bp
MKIQCDVCNKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLRP
KQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTG
VKLSASSSSQETPSPSNSAPDSLFHVSNQKTIPLSSTVSKVGVEAMGSAS
ASSISEYLIETLPGWQVEDFLDSYSVAFGFSKSDEALPRFDGDMESHLGS
FSTENVGIWVPQAPPPLLSSSQMNRVIGQNETNNIKGSSRSRLKDDNFTV
PQISPQSNSKRGRFLW*
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mRNA from alignment at Vu08:911848..913680-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g010600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g010600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g010600.1; organism=Vigna unguiculata; type=mRNA; length=1833bp; location=Sequence derived from: Vu08:911848..913680- (Vigna unguiculata
TTTGATTGGAGAGACAATAGAAAATTCCCATCTTAGACTATTAAGGTTTC
TAAAAATCAACAAAACTAAATCTTAAAAAACTCTTTGAGGTTGTTTCCAT
CTCCAACGAAAGTAGTATATTTTCTTTCTCTTTTGAGGAAAAAATCTACA
GCAAGAAGAAGAAGAAGTGAACGAGTGAGTGAGTGAGTGGGTGAGTTATG
ACGATTTGACCATATTTATGCATCTCAATCACTTCCCACTTTTCATAAGC
ATTACACAACTAAACCCCACGCTTCCTTTATTCTCCTTCTTCTCAAAACT
TCACTTCATTCTCTCACACAAAAAAAAAAAAAATCAAACCTTTAAACCAT
GAAGATCCAATGCGACGTGTGTAACAAACACGATGCATCGGTCTTTTGCA
CCGCCGATGAAGCCGTCCTCTGCGACGGCTGCGACCACCGCATCCACCAC
GCCAACAAACTCGCCTCCAAACACCAACGTTTCTCTCTTCTTCGACCCAA
ACAACACCCTCTCTGCGATGTTTGTCAGGTACAAAAATGCTAAAACAAAA
ACAAAAATGCAAAAAAAAAAAAAGAAACTTTTTTTGTTCAGATATTTGAA
ATTGTTGAAGATGGTTTCTTTTTGTAGGAGAGAAGAGCCTTCACGTTCTG
TCAGCAAGATAGGGCGATTCTGTGCAGAGAGTGTGACGTGTCGATTCACT
CTGCGAACGAACACACCCTTAAGCATGATAGGTTCCTTCTCACTGGTGTG
AAACTTTCTGCTTCTTCTTCATCGCAGGAAACCCCTTCTCCTTCAAACTC
TGCCCCTGATTCTCTTTTTCACGTTTCGAATCAAAAAACAATACCTTTAT
CTTCCACCGTGAGTAAGGTTGGTGTTGAAGCAATGGGTTCCGCAAGTGCT
AGCAGCATATCGGAGTATCTGATAGAGACTCTTCCTGGGTGGCAGGTTGA
AGACTTTCTCGATTCATATTCTGTTGCCTTTGGTTTCTCCAAGGTTTCCA
CTTTCCTCCTTTCTCTCTTCTTTCGATCATCCAAATCCATTCATTCATCT
ATTCTATTACATTGAAAACATAAAAATGGTATGTTTTCTGTGATGGATCA
TTTGGGTAATACTATACACTTTGATGTGATACTACATATGTTACCGGAAG
AAATTTCAATTCTGATAGTATTTCTAAAATTGTTATGCTGAATAAGTGAA
AACATTAAAAGGGTTTATGAAACTGCATGAAAAAATTGTTTTTTTTTTTG
TTGGATCTGAGATTTGATGAACTGCAGAGTGATGAAGCGTTGCCACGGTT
TGATGGTGACATGGAGAGTCATCTGGGTTCTTTCTCAACAGAGAACGTGG
GAATATGGGTTCCTCAAGCGCCGCCACCTCTTCTGAGTTCTTCACAGATG
AACAGAGTGATTGGTCAAAACGAAACCAACAACATCAAAGGTAGCAGCAG
ATCGAGGTTGAAGGATGATAATTTCACTGTGCCACAGATTAGTCCTCAGT
CAAATTCCAAGAGAGGAAGGTTTCTGTGGTAGAAACAAAAGAAGCCTCAG
TTTCCATATCTCATGAGCAAGAACAACCTCTTTCTTTTGTTTTGTTCTTA
GGTTACTCTGTCAATGTTTTTAATTTAGTTCTGTGTTCTTCCTCCTTCAT
CTTTCCCTGCTGGTTTTTTGGTTTTTGATGAATCTGTGTAACTTTCTGCT
GGTGATTGTAAATACAAACTTTTCCAAATGCATGTTATTTTTGACACATG
TTTAGAAGGGAAAAAGTGTTATATGCAGAGAGAATGTAATGTAAGACATC
TCCATCATCTCATACATTTTAAGACCATAATTG
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Coding sequence (CDS) from alignment at Vu08:911848..913680-

>Vigun08g010600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g010600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g010600.1; organism=Vigna unguiculata; type=CDS; length=801bp; location=Sequence derived from: Vu08:911848..913680- (Vigna unguiculata
ATGAAGATCCAATGCGACGTGTGTAACAAACACGATGCATCGGTCTTTTG
CACCGCCGATGAAGCCGTCCTCTGCGACGGCTGCGACCACCGCATCCACC
ACGCCAACAAACTCGCCTCCAAACACCAACGTTTCTCTCTTCTTCGACCC
AAACAACACCCTCTCTGCGATGTTTGTCAGGAGAGAAGAGCCTTCACGTT
CTGTCAGCAAGATAGGGCGATTCTGTGCAGAGAGTGTGACGTGTCGATTC
ACTCTGCGAACGAACACACCCTTAAGCATGATAGGTTCCTTCTCACTGGT
GTGAAACTTTCTGCTTCTTCTTCATCGCAGGAAACCCCTTCTCCTTCAAA
CTCTGCCCCTGATTCTCTTTTTCACGTTTCGAATCAAAAAACAATACCTT
TATCTTCCACCGTGAGTAAGGTTGGTGTTGAAGCAATGGGTTCCGCAAGT
GCTAGCAGCATATCGGAGTATCTGATAGAGACTCTTCCTGGGTGGCAGGT
TGAAGACTTTCTCGATTCATATTCTGTTGCCTTTGGTTTCTCCAAGAGTG
ATGAAGCGTTGCCACGGTTTGATGGTGACATGGAGAGTCATCTGGGTTCT
TTCTCAACAGAGAACGTGGGAATATGGGTTCCTCAAGCGCCGCCACCTCT
TCTGAGTTCTTCACAGATGAACAGAGTGATTGGTCAAAACGAAACCAACA
ACATCAAAGGTAGCAGCAGATCGAGGTTGAAGGATGATAATTTCACTGTG
CCACAGATTAGTCCTCAGTCAAATTCCAAGAGAGGAAGGTTTCTGTGGTA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding