Vigun08g014500.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.318e-71 Identity = 112/260 (43.08%), Postives = 159/260 (61.15%), Query Frame = 1 Query: 7 FEDLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDIIWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMMNA-SGFHYHPTVISVGVCGGSSNSKYVCLDLNVKDNCLRELQCPRVRSDGWLEIEMGEFFNSG--LKEEQLQIKVMETTSHIQKCGFVLEGIELRPKHV 777 F+ E CI+ I+S T+P DAC + VS+TF S +SD +W FL SSKK LYF+LCN P + D KKSV L+K +GK+C MLSA NL IIWGD Q+W+W +PESRFE VA LR VCWF+I G+ +T LS T Y+ ++VFK ++ GF +VGV G + + +C ++ R + P+ R DGW+EIE+GEFFN G + +++++ +ET +KCG +++GIE+RP + Sbjct: 14 FDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFL-PADYESLIPPSRVFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVGQEPSRRLICFSEAIRRG-RRNVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPAKI 271
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.795e-62 Identity = 107/262 (40.84%), Postives = 156/262 (59.54%), Query Frame = 1 Query: 1 MEFEDLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDIIWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMMNASGFHYHPTVISVGVCGGSS---NSKYVCLDLNVKDNCLRELQCPRVRSDGWLEIEMGEFFNSGLKEEQLQIKVMETTSHIQKCGFVLEGIELRPKHV 777 M F DL E CIA ++S TSP DAC++S VS+ SAA+S+ W FL + + + S S K L+ C P +I+ G+ S ++KR+GKKC+MLSAR LDI+W D+ + W W S+P+SRFE VA L VCWF+I GKIST LS T+Y+ +LVFK F + + V + N++ V L +++ R DGWLEIE+GE++ G +E++++ V+ET K G +++GIE+RPK + Sbjct: 1 MNFLDLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPS-DYRMYIDNSLSRFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRSTRTEVYNNRRVFLKSGTQES----------REDGWLEIELGEYY-VGFDDEEIEMSVLETREGGWKGGIIVQGIEIRPKEL 250
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.914e-58 Identity = 105/258 (40.70%), Postives = 152/258 (58.91%), Query Frame = 1 Query: 7 FEDLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDIIWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMMNA-SGFHYHPTVISVGVCGGSSNSKYVCL---DLNVKDNCLRELQCPRVRSDGWLEIEMGEFFNSGLKEEQLQIKVMETTSHIQKCGFVLEGIELRP 768 F+ L E CI+ I+S TSP DAC + VS+TF SA SD VW FL S +SKK LYF LC++P +I+ GKKS L+K +GK+C MLS++ L I WG + ++W+W S+PESRF +A L VCWF+I GK S LS T Y+ ++VFK + G + P + +G+ G S+ +++ R++ P R DGW+E E+GEFFN + ++++ V+E S K G +++GIE RP Sbjct: 61 FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPP-EYESLVSRSRVFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEFFNEE-RCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 8.832e-58 Identity = 109/270 (40.37%), Postives = 161/270 (59.63%), Query Frame = 1 Query: 4 EFEDLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLL-NLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDIIWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMMNA-SGFHYHPTVISVGVCGGS---SNSKYVCLDLNVKDNCLRE-----LQCPRVRSDGWLEIEMGEFFNSG--LKEEQLQIKVMETTSHIQKCGFVLEGIELRPKHV 777 E +DL E C++ I+S TSP DAC L+ VS+TF SA +SD VW F+ S+I S SKK LYF LC+ +ID GKKS+ ++K K+C M+SA NL I WG++ Q W W P++RFE VA L VC F+I G+I++ +S +T Y+ ++V+K +N GF + VGV G S +Y+C D + + R L P R DGW+EI++GEFFN G L ++++++ +E K G +++GIE+RP ++ Sbjct: 35 ELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFKFLSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQFRRRDRGKNLVKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRPTNI 304
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.323e-58 Identity = 109/304 (35.86%), Postives = 164/304 (53.95%), Query Frame = 1 Query: 7 FEDLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDIIWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMMNAS--GFHYHPTVISVGVCGG-----------------SSNSKYVCLDLNVKDNCLR------------------------ELQCPRVRSDGWLEIEMGEFF--NSGLKE---EQLQIKVMETTSHIQKCGFVLEGIELRPKH 774 F+ L E CI++++SHTSP DAC ++ VS++ SAA+SD VW FL + + SKK ++ +L ++ +++ GKKS ++K +GKKCYMLSA L IIWGD+ +W+W ++PES+FE VA LR VCWF++ GKIS LS THY+V++VFK N GF P VG G S+ S Y + + R + P+ R DGW E+E+G+F+ N G + ++++I +MET + K G +++GIE+RP+ Sbjct: 32 FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPS-EYSSLVLQSANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPER 334
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 5.275e-55 Identity = 102/260 (39.23%), Postives = 149/260 (57.31%), Query Frame = 1 Query: 7 FEDLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSAR-NLDIIWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMMNA-SGFHYHPTVISVGVCGGSSNSK---YVCLDLNVKDNCLRELQCPRVRSDGWLEIEMGEFFN-SGLKEEQLQIKVMETTSHIQKCGFVLEGIELRP 768 F++L E CI+ I+S TSP DAC + VS+TF SA SD VW FL + SSKK LYF +C++P +++ G KS L+K GKKC+MLS + ++ I W Q+W W S+PE+RFE V L VCWF++ G ++T LS T Y+ ++VFK N P +VG+ G S+ + +V +D R++ P R DGW+E E+G+FFN SG + + ++E + K G +++GIE RP Sbjct: 47 FDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPS-DYSSLVPPSRVFSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVGQESSQRHIYFVGPSDQRRDRETRDVTRPTKRKDGWMEAELGQFFNESGC--DVVDTSILEIKTPYWKRGLIIQGIEFRP 303
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 3.175e-53 Identity = 95/254 (37.40%), Postives = 148/254 (58.27%), Query Frame = 1 Query: 13 DLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDIIWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMMNASGFHYHPTVISVGVCGGSSNSKYVCLDLN--VKDNCLRELQCPRVRSDGWLEIEMGEFFNSGLKEEQLQIKVMETTSHIQKCGFVLEGIELRP 768 +L E CIA+ILS T+P+D C+LS VS F SAA SD VW+ FL ++ ++K L+F+L ++P +I+ S L++++G KCYM++AR L+I+WG ++W W SLP +RF VA L V W +I+GKI+ LS +T YA + VFK ++ P S+ + S V + ++D+ E Q P +R DGW E+E+G+FF ++++ + ET +K G ++ GIE+RP Sbjct: 3 NLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFL-PADFPAGFAAPAGLPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLADTESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPYEKKGLIVYGIEIRP 255
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 4.197e-53 Identity = 103/263 (39.16%), Postives = 149/263 (56.65%), Query Frame = 1 Query: 7 FEDLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDI-IWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMM-NASGFHYHPTVISVGVCGGSSNSKYVCLDLNVKDNCLRE--LQCPRVRSDGWLEIEMGEFFNSG--LKEEQLQIKVMETTSHIQKCGFVLEGIELRPKHV 777 + L E CI+ I+S TSP DAC + VS+ F SA +SD VW FL + SSKK LYF+LCN P +I+ GK S+ L+K +GK+C MLSA +++ D +Q + W PESRFE VA LR F+ + +++T LS T Y+V++VFK N GF VG+ G S ++C D + K + + P +R DGW+E E+GEF+N G + ++++I +E QK G V+ GIE+RP + Sbjct: 24 LDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPT-DYESLITPSRVFSSKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPESRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIVFKKADNWCGFKGVSIEAVVGIVGEESFRSFICFDTHGKGQARKRKVVAKPELREDGWMETEIGEFYNEGGLMSSDEVEISTVEGKYAQQKRGLVILGIEIRPAKI 285
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: PP2B6_ARATH (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana OX=3702 GN=PP2B6 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 8.119e-50 Identity = 98/261 (37.55%), Postives = 151/261 (57.85%), Query Frame = 1 Query: 7 FEDLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDIIWGDAAQHWEWTSLPESRFEVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVFKMMNAS-GFHYHPTVISVGVCGGSSNSKYVCLDLN---VKDNCLRELQCPRVRSDGWLEIEMGEFFNSG--LKEEQLQIKVMETTSHIQKCGFVLEGIELRPK 771 F+DL E CI+ I+S TSP D C + VS++F A + D +W FL + + SSKK LYF LC P +++ GKKS L+ +GKKC +L+A+ L I G+ ++W+W L ES FE V L F + G +ST LS THY+V++V+K+ + G P + VG G +++C D + K+ ++L + R DGW+E E+G+FFN G + +++++ +++ TS KCG ++EGIE RPK Sbjct: 45 FDDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPS-EYESLIPPWRVFSSKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEYWQWIELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDERHGLRDLPIQVGVGFKGQEMPKQFICFDESTDKTKEWPKKKLMKSKKRGDGWMEAEIGDFFNDGGLMGFDEVEVSIVDVTSPNLKCGVMIEGIEFRPK 304
BLAST of Vigun08g014500.1 vs. DB:Swiss
Match: PP2B7_ARATH (F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 8.266e-45 Identity = 103/261 (39.46%), Postives = 143/261 (54.79%), Query Frame = 1 Query: 13 DLAEACIAEILSHTSPMDACKLSLVSRTFCSAAESDFVWSAFLLNLTXXXXXXXXXXXXXKKGLYFNLCNHPTIIDQGKKSVQLDKRTGKKCYMLSARNLDIIWGDAAQHWEWTSLPESRF-EVVAVLRAVCWFDISGKISTVGLSSETHYAVFLVF-KMMNASGFHY---HPTVISVGVCGGSSNSKYVCLDLNVKDNCL--RELQCPRVRSDGWLEIEMGEFFNSGL--KEEQLQIKVMETTSHIQKCGFVLEGIELRP 768 DL E CI+ I+S TSP DAC +LVS+TF SA +SD VW F + S SSKK L+F LC+ +I+ KK + ++K TGK+C MLSA L++ W+W + P S + E V L WF+I + +T LS T Y+V++VF K GF Y V VG S +YVC ++ L + L P R DGW+EIE+GEFFN G +++++ V ETT K G +++GIE+RP Sbjct: 42 DLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKF-IPPEYESLLSRSQHFSSKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASALNL---STHHTWKWITNPVSAWLETVPELLTTRWFEIRCRTNTRFLSPRTRYSVYIVFLKADICYGFAYVAMEAVVRMVGHELSESCRRYVCFHEAMEWQFLTRKNLVNPERREDGWMEIEIGEFFNEGAFRNNDEIEMSVSETTQRNTKRGLIIQGIEIRP 298 The following BLAST results are available for this feature:
BLAST of Vigun08g014500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g014500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g014500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g014500.1; organism=Vigna unguiculata; type=mRNA; length=1448bpback to top protein sequence of Vigun08g014500.1_Vu_IT97K-499-35_v1.1 >Vigun08g014500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g014500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g014500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=260bpback to top mRNA from alignment at Vu08:1245221..1247021+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g014500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g014500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g014500.1; organism=Vigna unguiculata; type=mRNA; length=1801bp; location=Sequence derived from: Vu08:1245221..1247021+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:1245221..1247021+ >Vigun08g014500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g014500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g014500.1; organism=Vigna unguiculata; type=CDS; length=780bp; location=Sequence derived from: Vu08:1245221..1247021+ (Vigna unguiculataback to top |