Vigun08g018200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana OX=3702 GN=At1g75040 PE=1 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 1.509e-96 Identity = 148/234 (63.25%), Postives = 171/234 (73.08%), Query Frame = 1 Query: 142 FLLSLLGNVA-SATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDCAGGLRCTGGGIPPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCSGSDYVIAFCP 840 FL+ + +A AT FTL+N C TVW GTL G G LGDGGF L PG QLTAP+GWSGR WARTGC+FD SG G C TGDC GGLRC GGG+PP TLAEFT+ +G KDFYDVSLVDGYNV +GI + G+GDC+YAGC +DLNA CP+ L+V D VVACKSAC FNT +CC G + P+TC T YS IFKNACP AYSYAYDD +ST TC+G++Y I FCP Sbjct: 11 FLVFITSGIAVMATDFTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDC-GGLRCNGGGVPPVTLAEFTL--VGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMDQNN-VVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTGANYEITFCP 239
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g18250 PE=2 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 1.502e-79 Identity = 123/226 (54.42%), Postives = 145/226 (64.16%), Query Frame = 1 Query: 169 ASATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDCAGGLRCTG-GGIPPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRD-GGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCSGSDYVIAFCP 840 ASA+ N+C + VWPG G L GGF L L P WSGR W R GC+FD SG G C TGDC G L C G GG PPATLAE T+G DFYDVSLVDGYN+ + I+ +G+G C YAGC +DLN +CP LQVR G VVACKSAC+AFN+ +CCTG PQ+C T YS+IFK ACP AYSYAYDD +S TCS ++Y++ FCP Sbjct: 18 ASASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLG----PELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYIVTFCP 239
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium OX=42229 PE=1 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.228e-76 Identity = 126/241 (52.28%), Postives = 151/241 (62.66%), Query Frame = 1 Query: 127 FTLACFLLSLLGNVASATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDCAGG-LRCTG-GGIPPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCS-GSDYVIAFCP 840 +L+ +LS G A A + +N C Y VWPGTLT + L GF L QL P W+GR WARTGCS D SG C T DCA G + C G G IPPATLAEF + + G +DFYDVSLVDG+N+ + + GTGDC+ A C A++NAVCP ELQ + G+VVAC SAC F T +CCT TP+TC T+YSEIF NACP AYSYAYDD T TC+ G +Y I FCP Sbjct: 9 LSLSLTILSFGG--AHAATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNI--PAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica OX=3760 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 8.613e-76 Identity = 125/235 (53.19%), Postives = 150/235 (63.83%), Query Frame = 1 Query: 145 LLSLLGNVASATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDC-AGGLRCTG-GGIPPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCSGSD-YVIAFCP 840 L L + A A T N+CSYTVWPGTLTG+ L GF L G + APS WSGR + RT CS D SG TC T DC +G + C G G PPATL E T+ ASNG +DFYDVSLVDG+N+ + + GTG C+ + C AD+N VCP LQV+ G+V+ACKSAC AFN +CCT + P+TC YS++FK CP AYSYAYDD SST TCSG Y+I FCP Sbjct: 14 LAILFFSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITI--ASNGGQDFYDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica OX=3750 GN=TL1 PE=1 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 3.662e-75 Identity = 122/235 (51.91%), Postives = 151/235 (64.26%), Query Frame = 1 Query: 145 LLSLLGNVASATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDC-AGGLRCTGGG-IPPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCS-GSDYVIAFCP 840 L L + A A T N C TVWPGTLTG+ L GF L + APS WSGR W RT CS D +G TC T DC +G + C G G +PPATL E T+ A+NG +D+YDVSLVDG+N+ + + GTG+C+ + C A++N VCP LQV+ G+V++CKSAC AF S +CCT + TP+TC T YSEIF+ CP AYSYAYDD +ST TCS G DYVI FCP Sbjct: 14 LAILFFSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITI--AANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa OX=21020 GN=TL1 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.561e-72 Identity = 127/253 (50.20%), Postives = 155/253 (61.26%), Query Frame = 1 Query: 91 MKVMGLNPNSKDFTLACFLLSLLGNVASATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDCA-GGLRCTG-GGIPPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCSGS-DYVIAFCP 840 MK + L TLA F LS A + T N C T+WPGTLT + L + GF L + L + W GR WART C+ + SG TC T DC+ G + C G G IPPA+L E + A+N DFYDVSLVDGYN+ + + GTGDC+ C A++NAVCP ELQV+ +V+ACKSAC AFN +CCTG T +TC AT YS IFK CP AYSYAYDD++ST TCSG+ DYVI FCP Sbjct: 2 MKTLAL----YGLTLALFFLS----GAHSAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVE--INIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: THLP1_ARATH (Thaumatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 2.551e-71 Identity = 125/249 (50.20%), Postives = 158/249 (63.45%), Query Frame = 1 Query: 127 FTLACFL----LSLLGNVASATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDG-SGIGTCTTGDC-AGGLRCTGGGI-PPATLAEFTVGFASNG---NKDFYDVSLVDGYNVGIGILATRGT-GDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCSGSDYVIAFCP 840 F + FL L L+G + T+ NRCS+TVWPG L+ +G +G GF L PG AP+ WSGR WARTGC+F+ +G GTC TGDC + + C G G PPATLAEFT+G +DFYDVSLVDGYNV + + A+ G+ G C GC DLN CP EL+ G ACKSAC AF + +CC+G +A+P C + YSEIFK+ACP +YSYA+DDA+ST TC+ +DY I FCP Sbjct: 14 FIILSFLFFHALHLVG--SDGATITIVNRCSFTVWPGILSNSGSGDIGTTGFELVPGGSRSFQAPASWSGRFWARTGCNFNSDTGQGTCLTGDCGSNQVECNGAGAKPPATLAEFTIGSGPADPARKQDFYDVSLVDGYNVPMLVEASGGSEGTCLTTGCVTDLNQKCPTELRFGSGS----ACKSACEAFGSPEYCCSGAYASPTECKPSMYSEIFKSACPRSYSYAFDDATSTFTCTDADYTITFCP 256
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica OX=3750 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.038e-70 Identity = 112/213 (52.58%), Postives = 142/213 (66.67%), Query Frame = 1 Query: 211 TVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDC-AGGLRCTGGG-IPPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCS-GSDYVIAFCP 840 TVWPGTLTG+ L F L + APS WSGR W RT CS D +G +C T DC +G + C G G +PPATL E T+ A+NG +D+YDVSLVDG+N+ + + GTG+C+ + C A++N CP +LQV+ G+V++CKSAC AF S +CCT + TP+TC T YSEIF+ CP AYSYAYDD +ST TCS G DYVI FCP Sbjct: 2 TVWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITI--AANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia OX=3767 GN=TL1 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.152e-67 Identity = 124/239 (51.88%), Postives = 149/239 (62.34%), Query Frame = 1 Query: 133 LACFLLSLLGNVASATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDC-AGGLRCTGGGI-PPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTC-SGSDYVIAFCP 840 L LS V SA FT N+C TVWPGTLTG G L GF L G LT + WSGR W R+ CS D SG C+TGDC +G + C G G PPA+L E T+ A+NG +DFYDVSLVDG+N+ I + G+GDC CAA++N VCP EL + G+V+ CKSAC A N +CCTG + TP TC T +S++FKN CP AYSYAYDD SST TC G +Y I FCP Sbjct: 9 LVLVFLSEHAGVYSAK-FTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTL--ATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNSTSCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244
BLAST of Vigun08g018200.1 vs. DB:Swiss
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica OX=3760 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 9.799e-66 Identity = 113/227 (49.78%), Postives = 135/227 (59.47%), Query Frame = 1 Query: 169 ASATVFTLQNRCSYTVWPGTLTGNGVATLGDGGFPLEPGTEVQLTAPSGWSGRLWARTGCSFDGSGIGTCTTGDC-AGGLRCTGG-GIPPATLAEFTVGFASNGNKDFYDVSLVDGYNVGIGILATRGTGDCQYAGCAADLNAVCPEELQVRDGGGAVVACKSACAAFNTSVFCCTGEHATPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCS-GSDYVIAFCP 840 A A + +N C YTVWP + G L GF L QL P WSGR WART CS D SG C T DC +G L C G GIPPATLAEFT+ A+ G +DFYDVSLVDG+N+ + + GTG C+ CAA++N VCP ELQ G+VVAC SAC F +CCT T + C T+YS+IF CP AYSYA+DD TCS G +Y+I FCP Sbjct: 21 AHAATMSFKNNCPYTVWPASF---GNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTI--AAGGGQDFYDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242 The following BLAST results are available for this feature:
BLAST of Vigun08g018200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g018200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g018200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g018200.1; organism=Vigna unguiculata; type=mRNA; length=1391bpback to top protein sequence of Vigun08g018200.1_Vu_IT97K-499-35_v1.1 >Vigun08g018200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g018200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g018200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=281bpback to top mRNA from alignment at Vu08:1546120..1548125- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g018200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g018200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g018200.1; organism=Vigna unguiculata; type=mRNA; length=2006bp; location=Sequence derived from: Vu08:1546120..1548125- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:1546120..1548125- >Vigun08g018200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g018200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g018200.1; organism=Vigna unguiculata; type=CDS; length=843bp; location=Sequence derived from: Vu08:1546120..1548125- (Vigna unguiculataback to top |