Vigun08g024900.1

Transcript Overview
NameVigun08g024900.1
Unique NameVigun08g024900.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1955
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:2145780..2154749 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL090Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL485Pisum sativum Cameor genome v1aPisum sativum
psvuL624Pisum sativum Cameor genome v1aPisum sativum
psvuL643Pisum sativum Cameor genome v1aPisum sativum
pvvuL057Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL424Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL771Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL337Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0475Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0595Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL423Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anvuL0752Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0920Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1014Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL198Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL704Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR597Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR608Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL288Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL268Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL450Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL421Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL390Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL379Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL560Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR399Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL391Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL473Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL599Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL324Cicer arietinum
carvuL387Cicer arietinum
ccavuL432Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL549Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR657Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR677Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR690Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR715Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL227Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL242Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL677Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR466Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr09.1000425Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_10787.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Ca_01549Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Tiffany.R1.2g134240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr09.1379.1.62113176Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat05G0146700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cc_v2.0_15310.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_02G00386.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_004501504.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigan.03G270000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_03G01903.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.02G045000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat5g042600.1Pisum sativum Cameor genome v1aPisum sativum
XM_058925211.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_14891.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cr_02787.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Hedin2.R1.2g165760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan09g016300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va04G068110.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.001G022500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr01.1000172Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.03G171700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va07G068300.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.009G065600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg54929.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigst.02G037600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g237800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun09g237800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun08g024900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g024900Vigun08g024900_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g024900.1Vigun08g024900.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g024900.1_Vu_IT97K-499-35_v1.1Vigun08g024900.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g024900.1.v1.1.CDS.5Vigun08g024900.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g024900.1.v1.1.CDS.4Vigun08g024900.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g024900.1.v1.1.CDS.3Vigun08g024900.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g024900.1.v1.1.CDS.2Vigun08g024900.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g024900.1.v1.1.CDS.1Vigun08g024900.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g024900.1.v1.1.three_prime_UTR.1Vigun08g024900.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g024900.1.v1.1.five_prime_UTR.1Vigun08g024900.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THO5B_ARATH (THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1)

HSP 1 Score: 452.595 bits (1163), Expect = 3.433e-150
Identity = 286/464 (61.64%), Postives = 356/464 (76.72%), Query Frame = 1 
Query:  115 ESPHESLRKTKASIENAVAEIIALKKHAEPKPXXXXXXXXXXXXXXXHFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDG--QRRSKRPRRFQGKESLDQPGIFQVHPLTVNLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVGIKASNVGPENDILSNLFPDDTGLELPHQSAKLYVGDAVMFNGDRTSRPYKWAQHLAGIDFLPEVAPLLLARRETPDGGEGAKGEDFLPSLSHYRQHNRLQTVLQKIRSRIKARLVL 1500
            +SP E LR++K S+E  VA+++++KK    K      +RELLTQ FL+FV LRQANR+IL EE+  + ETERAKAP++ TT QL NLMYEKSHYVKAIKAC DFKSKYPDI++V E +FFR AP+ +KD  L S S H L+ KRLNFEL QRKELCK   +LEQ+KK+LLETIA RKKFLSSLP HLKSLKKASLPVQN LG+QHTKKLK+H+ AELLPPPLYV+YSQLLAQKEAF ESI++E+VGS+KDAQ +A  Q+ KD+G+S+  ES +LE+D PD+D   QRR KRP++   KE  D+ G++QVHPL + LHIYDDE+ D +S KLV L FEY+++LN++CVG + S  GPE +I  NLFPDD GLE PHQS KL +GD   F+ +RTSRPYKW QHLAGID    ++P+LL   +     + AK + F+P LS YRQ +R+QTVL++IR R KA L L
Sbjct:   35 KSPLELLRESKTSVEEIVAKMLSMKKQGNHK----SEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFELHQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSSNTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFDENRTSRPYKWVQHLAGID----ISPVLLG--QEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRKKAHLAL 488
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THO5A_ARATH (THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.850e-132
Identity = 259/467 (55.46%), Postives = 341/467 (73.02%), Query Frame = 1 
Query:  106 SEEESPHESLRKTKASIENAVAEIIALKKHAEPKPXXXXXXXXXXXXXXXHFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQPGIFQVHPLTVNLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVGIKASNVGPENDILSNLFPDDTGLELPHQSAKLYVGDAVMFNGDRTSRPYKWAQHLAGIDFLPEVAPLLLARR-ETPDGGEG-AKGEDFLPSLSHYRQHNRLQTVLQKIRSRIKARLVL 1500
            + E+SP E L++TKAS+E  +A+++++K+   PK       RELLTQ FL+F+ LRQANRSIL+EEE  RTETE AK+P++ TT +L NLMYEKSHY+KA KA  DFKS+YP+I+++SE +FF DAP+ +K   L + S H+L+LKRLNFEL QRKELCKL  +LEQ+KK+LLE+ A R KFLSSLP HLKSLKKASLPVQ+QL +Q+ KKLK H+ AELLPPPLYVIYSQ +A KEAF E+IDVE+ GS+KDAQ +A  QA +++      ES +LE      D +R+ KR ++       D+ G++QVHPL V LH+YDDE++D +S +LV L FEY+++LN++CVGI+ S  G E +IL NLFPDD+GLE PHQSAKL +G+  +F+  RTSRPYKWAQHLAGI+ LPE++P    +  +  D  +G A   D          H  +QTVLQ+IRS+ K +L L
Sbjct:   12 TAEKSPLELLQQTKASVEAIIAKMLSIKQQGTPK----SENRELLTQMFLNFINLRQANRSILIEEEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFSDAPEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLSSLPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENIDVEVSGSLKDAQTYARQQAEQNS------ESLRLE---VGVDEERQRKRLKKVGS----DEGGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNILCNLFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDKDIQYSDTAKGYASASD----------HRNVQTVLQRIRSQKKTKLTL 451
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THOC5_DANRE (THO complex subunit 5 homolog OS=Danio rerio OX=7955 GN=thoc5 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.500e-29
Identity = 120/382 (31.41%), Postives = 190/382 (49.74%), Query Frame = 1 
Query:  256 HFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQ-PGIFQVHPLTVNLHIYDDEVSDLESAKLVTLNFEYMMQLNIICV------------GIKASNVGPENDILSNLFPDDTGLELPHQSAKLYVGDAVMFN--GDRTS---RPYKWAQHLAGIDFLPEVA 1347
            HF+TL++ NR   +  +  R +T  AK  +++   QLQNL+YE  H  K I  C +FKS++ +IE+VSE EFF+DAP ++    +     H L L RL++EL QRK L + +      K+ + + I  ++++LSSL   L ++ +ASLPVQ  L +      K+   A  LPPPLYV++ Q  A  +A  +++ V I G V +A+  +              +S   E+D   E+ Q+ +KR R   G +  D+   + + HPL++ + +        +   ++ L F Y+M LNI+ V             I A  +     +L+ L+  D G E P+  A  Y  D V      D  S    PY W Q L+G+ F  + A
Sbjct:   94 HFITLKKLNRLAHMRLKKGRDQTHEAKQRVDVLHLQLQNLLYEVMHLQKEIGKCLEFKSQHEEIELVSEDEFFQDAPAEISRPQVTREDHHQLTLARLDWELDQRKRLAEQYKTSLSSKEKIQKAIEQKREYLSSLQPGLHNIMQASLPVQEYLSMPFEHMQKQAEVARHLPPPLYVLFVQAGAYGQACDKNLTVSIRGDVDEAKALSR----------PPEDSQDDESDSDAEEEQQNTKRRRPTVGVQLDDKRKEMLRRHPLSLGIDL------KCKDGSVLHLYFYYLMNLNILTVKTKVSTSVDLSGAISAGELLNSESLLNCLYASDHGNETPN-PANRYQFDKVGITTFADYVSDLGHPYVWVQKLSGLQFSSDAA 458
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THOC5_HUMAN (THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.955e-28
Identity = 133/438 (30.37%), Postives = 219/438 (50.00%), Query Frame = 1 
Query:  256 HFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQ-PGIFQVHPLTV--NLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVG------------IKASNVGPENDILSNLFPDDTGLELPHQSAK--------LYVGDAVMFNGDRTSRPYKWAQHLAGIDFLPEVAPLLLARRETPDGGEGAKGEDFLPSLSHYRQHNRLQTVLQKIRSRIKARLVL 1500
            HF+TL++ NR   +  +  R +T  AK  ++    QLQNL+YE  H  K I  C +FKSK+ +I++VS  EF+++AP D+  + +     H   L RL++EL QRK L + + +    K+ +L+ I  +K++LSSL   L S+ +ASLPVQ  L +   +  K++ +A  LPPPLYV++ Q  A  +A  +++ V I GSV +A+            +    E  + +  + D + ++ +KR R   G +  D+   + + HPL+V  +L   DD V        + L F Y+M LNI+ V             I A ++   + +LS L+P D G + P+ + +        L + D V+  G     PY W Q L G+ F           +E P     A   D   S SH      ++T ++ +++R+++RL L
Sbjct:   94 HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAK-----------ALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSV--------LHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQYQFDKVGILTLSDYVLELG----HPYLWVQKLGGLHF----------PKEQPQQTVIA---DHSLSASH------METTMKLLKTRVQSRLAL 489
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THOC5_BOVIN (THO complex subunit 5 homolog OS=Bos taurus OX=9913 GN=THOC5 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.719e-27
Identity = 133/435 (30.57%), Postives = 214/435 (49.20%), Query Frame = 1 
Query:  256 HFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQ-PGIFQVHPLTV--NLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVG------------IKASNVGPENDILSNLFPDDTGLELPHQSAKLYVGDAVMFNGDR-----TSRPYKWAQHLAGIDFLPEVAPLLLARRETPDGGEGAKGEDFLPSLSHYRQHNRLQTVLQKIRSRIKARLVL 1500
            HF+TL++ NR   +  +  R +T  AK  ++    QLQNL+YE  H  K I  C +FKSK+ +I++VS  EF+++AP D+  + +     H   L RL++EL QRK L + + +    K+ +L+ I  +K++LSSL   L S  +ASLPVQ  L +   +  K++ +A  LPPPLYV++ Q  A  +A  + + V I GSV +A+            +    E  + +  + D + ++ +KR R   G +  D+   + + HPL+V  +L   DD V        + L F Y+M LNI+ V             I A ++   + +LS L+P D G + P+  A  Y  D V     R        PY W Q L G+ F P+  P            +     D   S SH      ++T ++ +++R+++RL L
Sbjct:   94 HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSNMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKMLSVAIEGSVDEAK-----------ALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVLLDLKCKDDSV--------LHLTFYYLMNLNIMTVKARVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPN-PANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHF-PKEQP------------QHTVITDHSLSASH------METTMKLLKTRVQSRLAL 489
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THOC5_RAT (THO complex subunit 5 homolog OS=Rattus norvegicus OX=10116 GN=Thoc5 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.599e-27
Identity = 132/433 (30.48%), Postives = 209/433 (48.27%), Query Frame = 1 
Query:  256 HFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQN-FAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQPGIFQVHPLTVNLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVG------------IKASNVGPENDILSNLFPDDTGLELPHQSAKLYVGDAVMFNGDR-----TSRPYKWAQHLAGIDFLPEVAPLLLARRETPDGGEGAKGEDFLPSLSHYRQHNRLQTVLQKIRSRIKARLVL 1500
            HF+TL++ NR   +  +  R +T  AK  ++    QLQNL+YE  H  K I  C +FKSK+ +I++VS  EF+ +AP ++  + +     H   L RL++EL QRK L + + +    K+ +L+ I  +K++LSSL   L S+ +ASLPVQ  L +   +  K++ +A  LPPPLYV++ Q  A  +A  +++ V I GSV +A+  F   +  +D    +  E  +     P    Q   KR      KE L +      HPL+V L +   + S L       L F Y+M LNI+ V             I A ++   + +LS L+P D G + P+  A  Y  D V     R        PY W Q L G+ F           +E P     A          H +  + ++T ++ +++R+++RL L
Sbjct:   94 HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYSEAPPNISKAEITMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTRRRPTLGVQLDDKR------KEMLKR------HPLSVLLDLKCKDNSVLH------LTFFYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPN-PANQYQFDKVGILTLRDYVLELGHPYLWVQKLGGLHF----------PKEQPQHTVMA---------DHSQSASHMETTMKLLKTRVQSRLAL 488
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THOC5_MOUSE (THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 7.250e-27
Identity = 131/433 (30.25%), Postives = 214/433 (49.42%), Query Frame = 1 
Query:  256 HFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQ-PGIFQVHPLTVNLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVG------------IKASNVGPENDILSNLFPDDTGLELPHQSAKLYVGDAVMFNGDR-----TSRPYKWAQHLAGIDFLPEVAPLLLARRETPDGGEGAKGEDFLPSLSHYRQHNRLQTVLQKIRSRIKARLVL 1500
            HF+TL++ NR   +  +  R +T  AK  ++    QLQNL+YE  H  K I  C +FKSK+ +I++VS  EF+ +AP  +  + +     H   L RL++EL QRK L + + +    K+ +L+ I  ++ +LSSL   L S+ +ASLPVQ  L +   +  K++ +A  LPPPLYV++ Q  A  +A  +++ V I GSV +A+            +    E  + +  + D + ++ +KR R   G +  D+   + + HPL+V L +   + S L       L F Y+M LNI+ V             I A ++   + +LS L+P D G + P+  A  Y  D V     R        PY W Q L G+ F P+  P    +   PD  + A         SH      ++T ++ +++R+++RL L
Sbjct:   94 HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYSEAPPSISKAEITMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKRDYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAK-----------ALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVLLDLKCKDNSVLH------LTFYYLMNLNIMTVKAKVTTAVELITPISAGDLLSPDSVLSCLYPGDHGKKTPN-PANQYQFDKVGILTLRDYVLELGHPYLWVQKLGGLHF-PKEQP---QQTVMPDHSQSA---------SH------METTMKLLKTRVQSRLAL 489
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THOC5_CHICK (THO complex subunit 5 homolog OS=Gallus gallus OX=9031 GN=THOC5 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.459e-26
Identity = 139/446 (31.17%), Postives = 218/446 (48.88%), Query Frame = 1 
Query:  256 HFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQ-PGIFQVHPL--TVNLHIYDDEVSDLESAKLVTLN--------FEYMMQLNIICV------------GIKASNVGPENDILSNLFPDDTGLELPHQSAK--------LYVGDAVMFNGDRTSRPYKWAQHLAGIDFLPEVAPLLLARRETPDGGEGAKGEDFLPSLSHYRQHNRLQTVLQKIRSRIKARLVL 1500
            HF+TL++ NR   +  +  R +T  AK  ++    QLQNL+YE  H  K I  C +FKSK+ +IE+VS  EF+ +AP ++    +     H   L RL++EL QRK L + + + +  K+ +L+ I  +K++LSSL   L S+ +ASLPVQ  L +   +  K++ +A  LPPPLYV++ Q  A  +A  + + V I GSV++A+       +K    S   ES     +E      + +KR R   G +  D+   + + HPL  TV+L   D+ V  L    L+ LN        F Y+M LNI+ V             I A ++   + +LS L+P D G + P+ + +        L + D V   G     PY W Q L G+ F P+  P       T D    A         SH      ++  ++ +R+R+++RL L
Sbjct:   93 HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSEAPTEISRPDITLTEPHQQTLARLDWELEQRKRLAERYKECQTIKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL-----YKPPEDSQDDESDSDMEEE------QTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDENVLHLTFYYLMNLNIMTVLHLTFYYLMNLNIMTVKTKVTTAAELTTAISAGDLLSPDSLLSCLYPGDHGKKTPNPANQFQFDKVGILTLSDYVTELG----HPYVWVQKLGGLHF-PKDQP---QHTVTADNSLSA---------SH------MEMTMKLLRTRLQSRLAL 504
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THO5B_XENLA (THO complex subunit 5 homolog B OS=Xenopus laevis OX=8355 GN=thoc5-b PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 9.646e-26
Identity = 120/377 (31.83%), Postives = 191/377 (50.66%), Query Frame = 1 
Query:  256 HFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQ-PGIFQVHPLTVNLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVGIK------------ASNVGPENDILSNLFPDDTGLELPHQSAKLYVGD--AVMFNGDRTSR---PYKWAQHLAGIDF 1332
            HF+TL++ NR   +  + AR +T  AK  ++    QLQNL+YE  H  K I  C +FKSK+ +IE+VS  EF+ DAP  +    + S   H   L RL++EL QRK L + + +    K+ +L+ I  +K++L++L   L S+ +ASLPVQ  L +      K++ +A  LP PLYV++ Q  A  +A  + + V I G+V++A+            +    E  + +  + D + ++ +KR R   G +  D+   + + HPL V L +   E S L      TL F ++M LNI+ V +K            A ++   + IL  L+  D G   P+ + K Y  D   ++   D  S    PY WAQ + G+ F
Sbjct:   89 HFMTLKKLNRLANIRLKKARDQTHEAKQKVDAYNLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYSDAPAAISKPEITSTDPHQQTLSRLDWELEQRKRLAEKYKECLASKEKILKEIEIKKEYLNTLQPQLNSIMQASLPVQEYLSMPFDCMHKQYETARHLPAPLYVLFVQASAYSQACDQKLVVAIEGNVEEAR-----------ALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLCVTLTLMCKEGSTL------TLTFYFLMNLNILTVKVKIQPAFELSTAISAGDLLNPDLILGCLYQGDDGKTTPNPANK-YQFDKIGILSLSDYISELGHPYVWAQTMGGLHF 447
[Close]
BLAST of Vigun08g024900.1 vs. DB:Swiss
Match: THOC5_XENTR (THO complex subunit 5 homolog OS=Xenopus tropicalis OX=8364 GN=thoc5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.315e-25
Identity = 120/377 (31.83%), Postives = 189/377 (50.13%), Query Frame = 1 
Query:  256 HFVTLRQANRSIXXXXXXXXXXXXXXKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDXXXXXXXXXXXXIANRXXXXXXXXXXXXXXXXXXXPVQNQLGVQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKDTGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQ-PGIFQVHPLTVNLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVGIK------------ASNVGPENDILSNLFPDDTGLELPHQSAKLYVGD--AVMFNGDRTSR---PYKWAQHLAGIDF 1332
            HF+TL++ NR   +  + AR +T  AK  ++    QLQNL+YE  H  K I  C +FKSK+ +IE+VS  EF+ +AP  +    + S   H   L RL++EL QRK L + + +    K+ +L+ I  +K++L+SL   L S+ +ASLPVQ  L +      K++ +A  LPPPLYV++ Q  A  +A    + V I G+V++A+            +    E  + +  + D + ++ +KR R   G +  D+   + + HPL V L +   E S L       L F ++M LNI+ V +K            A ++   + ILS L+  D G   P+  A  Y  D   ++   D  S    PY W Q + G+ F
Sbjct:   89 HFMTLKKLNRLAHIRLKKARDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYSEAPATISKPEITSTDSHQQTLSRLDWELEQRKRLAEKYKECLASKEKILKEIEIKKEYLNSLQPQLNSIMQASLPVQEYLSMPFDCMHKQYETARHLPPPLYVLFVQASAYSQACDRKLVVTIEGNVEEAR-----------ALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLCVTLTLKCKEGSTL------NLTFYFLMNLNILTVKVKIQPALELSTAISAGDLLNPDLILSCLYQGDDGKTTPN-PANRYQFDKIGILSLNDYISELGHPYIWVQTMGGLHF 447
The following BLAST results are available for this feature:
BLAST of Vigun08g024900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
THO5B_ARATH3.433e-15061.64THO complex subunit 5B OS=Arabidopsis thaliana OX=... [more]
THO5A_ARATH6.850e-13255.46THO complex subunit 5A OS=Arabidopsis thaliana OX=... [more]
THOC5_DANRE8.500e-2931.41THO complex subunit 5 homolog OS=Danio rerio OX=79... [more]
THOC5_HUMAN6.955e-2830.37THO complex subunit 5 homolog OS=Homo sapiens OX=9... [more]
THOC5_BOVIN3.719e-2730.57THO complex subunit 5 homolog OS=Bos taurus OX=991... [more]
THOC5_RAT5.599e-2730.48THO complex subunit 5 homolog OS=Rattus norvegicus... [more]
THOC5_MOUSE7.250e-2730.25THO complex subunit 5 homolog OS=Mus musculus OX=1... [more]
THOC5_CHICK1.459e-2631.17THO complex subunit 5 homolog OS=Gallus gallus OX=... [more]
THO5B_XENLA9.646e-2631.83THO complex subunit 5 homolog B OS=Xenopus laevis ... [more]
THOC5_XENTR8.315e-2531.83THO complex subunit 5 homolog OS=Xenopus tropicali... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..334
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
IPR019163THO complex, subunit 5PFAMPF09766FmiP_Thoc5coord: 89..444
e-value: 7.1E-108
score: 361.1

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g024900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g024900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g024900.1; organism=Vigna unguiculata; type=mRNA; length=1955bp
AATTTAGCGTAAAACTTCTAAATCACTCACAATTTCAATTTCCTTAGAGA
CTCAAACACGCTCTCCACGGTGAAACCATTACCGGTGCATAGAGTAACAA
TGGAAGACGGCGAAACGACGGAGGAGGTGGTTGTCGTTCCGGTTTCCAAT
AGCGACGGCGTCGGTGACGAGCAAATGTTTCCGCATTCCCCACGACAATG
CGATTCGGAAGAGGAGTCTCCGCACGAATCGTTGCGTAAAACGAAAGCTT
CAATAGAAAACGCCGTCGCCGAGATTATCGCTCTGAAGAAACATGCCGAA
CCCAAACCGCTCCTCACTCTCCGACTCAGAGAGCTGCTCACTCAAACGTT
CCTCCATTTCGTCACTCTTCGCCAGGCCAATCGCTCCATCTTGTTGGAGG
AGGAGCATGCGAGAACGGAAACTGAGCGTGCGAAGGCGCCTCTGGAACTC
ACCACGCAGCAGCTTCAGAACCTGATGTACGAGAAGAGTCACTACGTGAA
GGCAATAAAGGCGTGTAACGATTTCAAGTCCAAGTATCCTGATATTGAGG
TGGTGTCGGAGGGAGAGTTTTTTCGTGACGCACCGCAGGACATGAAGGAC
TCCGTTTTGTGTAGCCACAGTGAACATAATCTCGTGCTGAAGAGACTCAA
TTTTGAGTTGTTTCAGCGCAAAGAGCTTTGCAAGCTTCATGACAAACTGG
AGCAGAAAAAGAAAACTCTTTTGGAGACAATTGCAAACCGAAAGAAGTTC
TTGTCTAGCCTCCCTTCACATCTCAAGTCTCTAAAGAAAGCATCCTTGCC
AGTGCAAAATCAACTAGGAGTTCAGCATACTAAGAAACTAAAGCGGCATC
ACTCAGCAGAGTTGCTTCCACCACCTCTTTATGTGATTTACTCACAACTG
TTGGCTCAAAAGGAGGCGTTTGGAGAATCTATTGATGTGGAGATTGTAGG
AAGTGTCAAAGATGCTCAAAATTTTGCCCACATTCAAGCTCACAAGGACA
CTGGCATTTCCACTACGGTAGAGAGTCCGAAATTGGAAAATGATGAACCT
GATGAAGATGGTCAGAGACGGAGTAAAAGGCCAAGGAGGTTTCAAGGCAA
GGAGAGCCTTGACCAACCAGGAATATTTCAAGTTCACCCACTTACAGTCA
ATCTCCATATTTATGATGACGAAGTCTCTGATTTAGAGTCTGCTAAACTT
GTTACTCTAAATTTTGAGTACATGATGCAGTTGAATATTATATGTGTCGG
GATCAAAGCATCTAATGTTGGTCCTGAGAATGACATCTTAAGCAATTTGT
TTCCTGATGACACAGGTCTCGAGCTTCCTCACCAGTCAGCTAAGCTCTAT
GTTGGGGATGCTGTAATGTTTAATGGCGATAGAACTTCACGTCCTTACAA
ATGGGCTCAGCACCTGGCCGGTATTGATTTCTTGCCCGAGGTGGCTCCAT
TGCTGCTTGCTAGACGTGAAACTCCAGACGGTGGTGAAGGAGCCAAAGGC
GAAGATTTCTTACCTAGTCTTTCACATTATCGCCAGCATAACCGATTGCA
GACAGTTCTGCAGAAAATTCGCTCAAGGATAAAAGCACGTTTGGTTCTTC
AATAACGTGTCATTGTTCTTGTATTTTTACAGTTTTAGAATAGGAAGGAT
CCTCCTGGGTGTTCATTGAACTGAAAATAATGCAGTCAGCCAGCCGAAAA
GCTTGCTTTTGATCTATGCTTTGGGTGTATTATTGTAACTGACATCTTAG
TTATTTGGTCTACCTGCTGTAAATACTTGTAACCTATATTTTTTAGGATT
TTGTTTTTTTATCCCTTGGTTGAAATTACATTTTGTTTTGGAGGAACCAA
GGTATCATGCTTGTAACCGTGGCTTCTGAAGATTATTACTTCATGAAGAA
AAAATATGCAAATTTTATTTTTTCATAAGttaaaattaaagattactttt
tttat
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protein sequence of Vigun08g024900.1_Vu_IT97K-499-35_v1.1

>Vigun08g024900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g024900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g024900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=502bp
MEDGETTEEVVVVPVSNSDGVGDEQMFPHSPRQCDSEEESPHESLRKTKA
SIENAVAEIIALKKHAEPKPLLTLRLRELLTQTFLHFVTLRQANRSILLE
EEHARTETERAKAPLELTTQQLQNLMYEKSHYVKAIKACNDFKSKYPDIE
VVSEGEFFRDAPQDMKDSVLCSHSEHNLVLKRLNFELFQRKELCKLHDKL
EQKKKTLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGVQHTKKLKRH
HSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKD
TGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQPGIFQVHPLTV
NLHIYDDEVSDLESAKLVTLNFEYMMQLNIICVGIKASNVGPENDILSNL
FPDDTGLELPHQSAKLYVGDAVMFNGDRTSRPYKWAQHLAGIDFLPEVAP
LLLARRETPDGGEGAKGEDFLPSLSHYRQHNRLQTVLQKIRSRIKARLVL
Q*
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mRNA from alignment at Vu08:2145780..2154749-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g024900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g024900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g024900.1; organism=Vigna unguiculata; type=mRNA; length=8970bp; location=Sequence derived from: Vu08:2145780..2154749- (Vigna unguiculata
AATTTAGCGTAAAACTTCTAAATCACTCACAATTTCAATTTCCTTAGAGA
CTCAAACACGCTCTCCACGGTGAAACCATTACCGGTGCATAGAGTAACAA
TGGAAGACGGCGAAACGACGGAGGAGGTGGTTGTCGTTCCGGTTTCCAAT
AGCGACGGCGTCGGTGACGAGCAAATGTTTCCGCATTCCCCACGACAATG
CGATTCGGAAGAGGAGTCTCCGCACGAATCGTTGCGTAAAACGAAAGCTT
CAATAGAAAACGCCGTCGCCGAGATTATCGCTCTGAAGAAACATGCCGAA
CCCAAACCGCTCCTCACTCTCCGACTCAGAGAGCTGCTCACTCAAACGTT
CCTCCATTTCGTCACTCTTCGCCAGGTTCCTCACGCGCTAGGGTTTTATC
TTCGCAATGCGACGTCGTAACGGAACTAACTAACGCGCGTTTCACTTTTC
AGGCCAATCGCTCCATCTTGTTGGAGGAGGAGCATGCGAGAACGGAAACT
GAGCGTGCGAAGGCGCCTCTGGAACTCACCACGCAGCAGCTTCAGAACCT
GATGTACGAGAAGAGTCACTACGTGAAGGCAATAAAGGCGTGTAACGATT
TCAAGTCCAAGTATCCTGATATTGAGGTGGTGTCGGAGGGAGAGTTTTTT
CGTGACGCACCGCAGGACATGAAGGACTCCGTTTTGTGTAGCCACAGTGA
ACATAATCTCGTGCTGAAGAGACTCAATTTTGAGTTGTTTCAGGTGAGTT
GCATTTGCCTATTTTTATTCAATCAGACATGGTTAAGAGTTGTTAAAGCC
TTAGGAGTTGGAAATGTTTGAAGTTCTAGTTACTGTTTTGTTGCGTGTTG
GATTTTGTGGATGAGTGCTGTCAATGTGGCCACAATTGCGGTATCGCTGT
GTTCCTTGATATTGGGGATAAATACGGTGAATGTGACGATAACTACAATC
CTGTTACGGTCATGAGCATCGTAAAATTCGTGACAATAATATTGAATCGT
GATTGCACATAGTTGTAGTTGTGTTGCGGGCGAAACAATCTTAAAACTTT
GACTATAACTTCGAAATTGCAGCTGCGGTTTAAAACCTTGTACGCACTCT
AGAAAAATTTAATGTATGCTATGTTGAGCCTACACTTAATATATTGTGCT
CTTGGGGTATTCGATTCTTCATATTAGATTTTTAATACGCTAAAGAAACT
TTGGGATATTGTAGTTTGGCAAGTTCCAGGATTTACCTATGTCTCAGTAT
TATTATGGAATCTAATTTTTGTCCAAAAAAGGAACCAAGAGAATGGAAAT
ATTTGATTTTCAGATGTTGGTAAATGTTGAATTGTACTATTGTGGTCATA
AATGGTTTTGCTTCCGGCACAAGTTTTGTATTGACAAGCTAAAATGTTCT
TTTAAAGAAGGATTGGAGGGTAAATAGATGGGGGCGCCCTGTGTCAACTT
GTCTCTGTACTTATATTTGCAATGTTGTATTGTATCAGCGCAAAGAGCTT
TGCAAGCTTCATGACAAACTGGAGCAGAAAAAGAAAACTCTTTTGGAGAC
AATTGCAAACCGAAAGAAGTTCTTGTCTAGCCTCCCTTCACATCTCAAGT
CTCTAAAGAAAGCATCCTTGCCAGTGCAAAATCAACTAGGAGTTCAGCAT
ACTAAGAAACTAAAGCGGCATCACTCAGCAGAGTTGCTTCCACCACCTCT
TTATGTGATTTACTCACAACTGTTGGCTCAAAAGGAGGCGTTTGGAGAAT
CTATTGATGTGGAGATTGTAGGAAGTGTCAAAGATGCTCAAAATTTTGCC
CACATTCAAGCTCACAAGGACACTGGTAATTTAGAGTTGATGTGTTAATT
CTAGCATTTTATCAATTGGAATCTATGTTATCCATTATCCAGTATTATTT
GCAGCTTCAGTGTATTTGCTATTGCAGGACTATAAACTTTAATGTTTCAG
TATCTCGTAGGTGATTCAACTCCGGTCCCCTGAATATCACTCCTATATAT
TATCTGAGATTTAGCTGGTGTTTACAGTGGGTTATTAAATAGTTTCAACA
CTAATCACCGGATAATCAGTAAACGAATAGAAGTTTATTACTAGATTTAA
AGTACCATTGTTATTTGTTCTTGATCGGAACCAAATTGTCTCAAGAGCCT
TTTGTCCTTTGCCTCCTCCTCCTAAAACTCGCCTTTGAGTCACTCCTGGA
TTGCGCTCCGGGGGTGGGGTACTTGCAGGCACTCCGACGCTCAAGTCAGT
AATGCTTCAATGGAATGTGTATATTAAAACTTAGTTGAATTCGTCCCTTT
ACCTTTTAATACTAGACCTAATTTTATACTACCTGGTTTCGATCCTGACT
TTATTGCTTTCATAGTCGTTGCCCTTCTTTCATAAATGGTAATAAACCCC
CTGAATATTCTATCATGAATATCCTATCTTAACTGCTTTGGACTTGAATG
TACCGTTACACCGTCATATCTCGCCTGAAATTGCGCTGCCTACTCCCACA
TTAAGCCATATTCATCTGCCTCTTCATCTGGGCCGGGGTGTAGTCAGCCC
ACTAGGCCGAGTAGTAGTAGGCCATGCTGGATGAGATATTCCCAACCCTT
TTCTGTGCAAACCTCTCACCACACCCTCCACTTGGATTTCCTACGTGCCC
CTCTGTACCAGTCCATGCTTCCTCCCCCTACATTGTTGGGCCGAGTATAC
CACGGTTTCCTTGGGTCGGGTATATCCCTGCCCTGCCTATATACCAGCCC
CCTAGGTTTGCACTGCACGAAGTAATAAAAGAGCCTTGATTGTGATCTCC
CACTCCCTCGTACTTTGTAGGGCTAGTAAGCCGATGCATAAAAGATTGAA
TGGGAAAAGAAAAAGGTCTTGTATGCACGGTATTCGAGATCTTTGACATG
ATGGCAGTACGAAAAGTCGTGCCACCCTTGGATGTGGCGAGATCTAACGA
TGTTGATGCCTACGCATGAGAGAGTGTAGGACCACTATAAATATGGGTAG
GGTCCTATGTTAGGGTACACGTGCTTGCTTGAGAGGAGAACCATCCCCGG
CCGAGATATAGTCGTAGGTCGCCACTCCCAAGGTATGTCGTCCTCCTCTG
TTTATTCTCCTTCCAGTAGGCATTGCTATTCAGAGGAAGAGTGGAATGTA
TCCCATTGTACTAGTAGCGCAAACTCTAAGAGGGATAGCAACCACGTTGT
TGGTGCTGAGGATTTCTCGGTCCTACGCCACCCGGGTTACGAATGGGTAG
ATCCTAGGGTGAAACTACCATTGTCTAGGTTCGGAAAGTCCTCAGCCGTA
GCTTCCTTGTGCAATAAAGTGGAGATGATAGCTAGCACTGTAGATGAAAA
CATTGTAAGCATAGAGCGAACCAAGAGTGGAGATAGTGTTTGTCACGACC
GAGAGGGTCATTCTCATGACTTCTTCTACATGTACTCGACCTTAGTAACA
AACTTGCATGTGTGCCTCCCCTTGGATGACTTCACAATGGGAGTCTTGAG
GGTATTGAACATGGCCCCCAACCAACTACATCCCAATAGTTGGGCTTCCC
TCCACGCGATCAGACTTATCGAGTGTTCCACTTGAAACCTTCTCCCCAAG
TATTCCTACAATATTATTGCACCCGACCGGGAGAGTTGGTTATTGCTAGT
GGGCCAAAGCCACCACTGCCTCTTAAAGTCCTATACCTAGTCCTTTAAAA
AGTTTAAGACTAGGTTTTATAAGTAGTCATAAGGTTTGTTAAGGCTTAAC
ATTTTTACTTTGACAATGGTGAGCCAAATTTTCCTTTCTACTGGACCCAA
ATTCTGACCCAATACCGTAACTGGTCGAGAACATGCCTTACCTCGGAGGA
TCGGTATGTGTTGTCGTACCTGGATCAAATGCCCAAGAAACTTTCCTCCA
AGAAAATTATTGGGGATTTTAGGTCCTCCCATCCGCGAGATGATCTGTTT
GGTATGTATGCTTGATTGACTGTATGCAACTGATCTACCAATAATCCTAG
TTAACATTTGCTTCTTGTTGCAGATATTATGGCTGCTGCTGGTCCGTCCA
GAAGAGAAGTTTTCCTCGAGCTGAGAAGAAAAAGACTAGAGGAGGAAAAA
AGAAGAACATGTGAAAGCTCCCATCGCTCTGGTACTGAATCTGACGCTCA
GAGGGGTGACTTGCTGCCCCCTCCAGCTGAAAAGAAGAAAAGCAAGCACA
AGGACTGCCCTTCCAAGCCTAGTACCCCTCAACCTCCTTCACCCAAGAAG
ACTTGGGGAAGTGTTTCAAATGAAAGCATGCCAGACTCCTTTGTAACCCT
GTTTGACTCCCAACTGAAGATTAGCGAAGGCATAGAAGTGTCCCTCTCGG
CAGAGGAAGTTGACATTGTCTCGGCCCTGCACGCAAAAACTGTACTGTAT
GTGCTAAATGAATTTCAGGCTAGGGCCATGGTGATGGGCCGCCACCTGGA
AACAGTCTTGAGCAAACTGCCCGATGCAAACAAGTTGGGAGCTGAAATAA
AGACCCTACAGAGTGAGTTGGCCGAGGCAAACAGGCAGATGCAGGAAATG
TCCCTATAGCTTGAAAATGTGAGGGATGAGAGATCTCAGCTTTTGTCTGA
ATGCAATGCCCTGAAGGTGCACTGTCGGGACTTAGAGAAGAAGGGTGAAA
AGTCACAGGCCACTCTGGAGCTAATAGAGGAAGAACTAGCGGCCTCTAAG
AAAGAGTACAAAGAAGCGTTGGGCAGGATTTACCAGCTAAAAGGATATGT
GATGTCCCAACATGAAGAGGGTTTCTACAAGGGTCTACGCTAAGCTTCCC
ATTTCTACAATATAAATGCCGAGGATGAGCGCTTTGACATTGACAAAGAC
ATGCACGATGGCACCTTCATGGCCATTGAGGACATCCCCCTTGCTACCTT
TGCTCATAACCTAGATGAGCGAGAGAGACCCGCCACTCCCCCAGACGCCT
GATGAAGCCTTGTGTTCCTTCTTTAGGTTATTATTTCTTCTTATTAATGT
TGTATGTAACAAACTGTATGGGTTCTGGTCACCCTCTTTCGGTATGTACC
GTATGTACTGTATTGATGCACTCTAGTCTTTATGTACGGAATTAGCACTT
AGTTTCTTGTTTGTCACGCGTATACTTGTTTACCACTGTCATGCTTGGTC
CTTGGTACCTACCTGTCACAACATGAAGGTGTTTACGAGAGTTGGTTGAG
ATATGGTCGGCCTGGAAATGGCTGTGATGATGTCGACTTATTCATTGGCC
TAGTTGTACTCAACCCTGGGTGCCAGTCGAGTCTATAAATGCATTGGAGT
ATGAGATGTCTTGAATAACAAGTCTCCTTCATTGATTCCTTGACGTTTGT
ATGGGGGGATCATCTTGAGCGAGAAGCATCCTTTCCCATTGATACAGATG
GGGGATCATCTCGTTGGATGAAGTTTCCTTTCCCATTGATACAAATGGGG
GATCATCTCGTTGGATGAAGCTTTCTTTCCCATTGACAAAAAGTGCTCGA
AAGTATCCGATTGAAATGAGATGATCTATTCACACATGCGTGCTAAAAAT
GTAATCATAGGATAAAGGAAGGTGAAAAATATTGTATTTATTGGTACGAT
GCCTCATTAAAATCTTCTTGACCAAAATCCTCCTTAGGAAAAAAAGATTA
AGGTAGGAAAGAGTACATTGTTTATCATGTGAACAACCCACACATTAAAT
AGAAAATTTGTACCGTAAACAATCACCAAACAAATCAACTATATTAGAAC
TTGAGGTGTGACGCGTTCTAGGTTGCTGGAATAGGAAGTGCTCCAGCCTG
TATGCCCCCTCTTTGACACAAAACAGGTCCTCCCATTTGGGCAAAAACTT
TCCTTCATGCTTTCGAGCCGCACTCGCCATTCACAACACCAGGTCCCCCT
AGTGGAAGGCTCTAGGTTTAACTTTGGAGTTGTATTGTCACTAGTCATGG
TCCCTGTGTTCCTAGACTAGGTCCAGACTTGTGAGCATGCTTTCTTCATC
AAGGTGAATATCAAACAGACTCTTCCGTAGGGTGGGTTCCTCTATCTCTA
CGGGGATCATCGCATCAACCCCATATGTCAGGTTGTATGGCATTTCTTGC
GTTGTAGACTGTGGGGTGCAATGATAAGCCCACAAGACCTTTATCAACTC
ATCAACCCATTTGCCCTTGGCATTGCCTAATCTCTTCTTCAATTTCCGTA
ATATAACTTTATTAGCCGCTTTGGCCTGGCCATTTGTCTGTGGATGTTCC
ACCGAGCTAGTAATATGGCATATATGGAGTCCCTTGTAGAACTCAGTTAA
ACTTTTGTCAATGAATTGTCTGCCATTGTCAGTTATTATGGTGTTCGGAA
CTCCAAACTTGCACACGATATTCTTCCAGACGAACTTTTGTGCCTGTTGA
GCTATAATAGTAGCTAGAGGTTCCGCCTCAATCCACCCTGGTGAAGTAAT
CTATTGCTACCAGCAGGAATTTGACCTGTCCCTTCGCCGGACTAAATGAC
CCTAAGATGTCCATGCCCCACCTTGCGAATGGCCACGGGGACGTAACGCC
ATGCAATTCCTCAAGCTTTAAATGTATCATATTGCCATGTTGCTGACACT
TTACACACTTCCTGATGTATTTGTCGCAGTCTGCCTTTACAATTGGCCAA
TAATATCCAGCCTGCAAGACTCGAGTCGCCATGGATCTTGTCCCAGAATG
CAGACCACAAATTCCCGAGTGTAACTCTTCAAGAATATACTGGGCTTGTT
GGTCCGTGATGCACTTCAGAAGAGGGTTTGAGAACCTTCGCTTATACAAT
TCCCCGCTAATTAATATGAATTGGGAGGCATTCTTTCGCATGGTTGGGTT
GTCACCTCCTGACTCCTCTCCACTCTGGATGAACTAGATAATAGGAGTCA
TCCATCCCACATCTTTTAACCCTGCCCCCTCTATAGCGTTGCTATCCACC
AGGGTTACAGTGGGATGATTGAGCGTGGCATGAATCATTGTGCGATGCTG
ACCTTTCAACTTTGCGGTTGCCAATTTTGAGAGTAAGTCAGCCCTAAAAT
TTTGGGACCTGCTTACATGCGTCACACTGGCAGTCCTAAACTTACTCATC
ATACTCTGCACCACATGATAATAGCGCAGTAGAAGAGGGTCCTTCACCTG
GAAAGTGCCTTCTAAGTGCCCCACTACCAACTGAGAATCTGTTTTGCACG
TGAGGACCTTGGCCCCCGTGTCTGCAGCAAGGAGTAGGCATGCTATCAAC
ACTTCATATTCTGCTTGATTGTTCGAAGGTTTGAGGCCAAAGCGTAGAGA
TTGTTCCAGCAACAAATTGTTCGGCCCCTGTAACACAATGTCGGCCCCTC
CCCCTTTTCCATTAGAGGAACCATCCACTGAAAGGATCCATGCCCCTTCA
TTCAGATCGGGAACTCCAACTAACTCGTTAACGAAATCGGCCAGGCACTG
TGCCTTGATGGATTCACGTGCCTCACATTGGATGTTGTACTTTGATAACT
CTACGGCCCATCCTACCATCCGGCTTGCCAAGTCGGGCCTTCTCAACACT
TTTGTAGATTGGGTAATTGGATTTAACGATGGCCTAATACCCTTGAAAGT
ATGACTGCAATTGTCTTGTTGTTGTTATTAGCCCGAGGGCCACCTTTTCT
ACCGTCTGGATGAGATGTTCCCAGCCCTTTTTTGCGCCAACCTCTCACCA
CACCCTCCACTTGGATTTCCTAAGTGCCCCTCCGTATCAGTCCATGCTTC
CTCCCCCTGCACTGTTGGGCCGAGTATACCACGGTTTCCTTGGGCCGGGT
ATATCTCGGCCCTGCCTATACATTATTATCAATGGTTTTCACTCTTGTTA
CTTTTAATATTTGCCATATTTCTTAATTTGTTTGTTTGTGGTTTTATCTC
AGGCATTTCCACTACGGTAGAGAGTCCGAAATTGGAAAATGATGAACCTG
ATGAAGATGGTCAGAGACGGAGTAAAAGGCCAAGGAGGTTTCAAGGCAAG
GAGAGCCTTGACCAACCAGGAATATTTCAAGTTCACCCACTTACAGTCAA
TCTCCATATTTATGATGACGAAGTCTCTGATTTAGAGTCTGCTAAACTTG
TTACTCTAAATTTTGAGTACATGATGCAGTTGAATATTATATGTGTCGGG
ATCAAAGCATCTAATGTTGGTCCTGAGAATGACATCTTAAGCAATTTGTT
TCCTGATGACACAGGTCTCGAGCTTCCTCACCAGGTAAGGGCATCTTGTT
TACTTGTTGATGCGTCTTTAATCTGTCTATCTGCAACTTTCGTTTATTCT
ATCCCCGTTGCATTTATATGCCATTTGTTTTTGTTTGGATTGCGATGCAG
TCAGCTAAGCTCTATGTTGGGGATGCTGTAATGTTTAATGGCGATAGAAC
TTCACGTCCTTACAAATGGGCTCAGCACCTGGCCGGTATTGATTTCTTGC
CCGAGGTGGCTCCATTGCTGCTTGCTAGACGTGAAACTCCAGACGGTGGT
GAAGGAGCCAAAGGCGAAGATTTCTTACCTAGTCTTTCACATTATCGCCA
GCATAACCGATTGCAGACAGTTCTGCAGAAAATTCGCTCAAGGATAAAAG
CACGTTTGGTTCTTCAATAACGTGTCATTGTTCTTGTATTTTTACAGTTT
TAGAATAGGAAGGATCCTCCTGGGTGTTCATTGAACTGAAAATAATGCAG
TCAGCCAGCCGAAAAGCTTGCTTTTGATCTATGCTTTGGGTGTATTATTG
TAACTGACATCTTAGTTATTTGGTCTACCTGCTGTAAATACTTGTAACCT
ATATTTTTTAGGATTTTGTTTTTTTATCCCTTGGTTGAAATTACATTTTG
TTTTGGAGGAACCAAGGTATCATGCTTGTAACCGTGGCTTCTGAAGATTA
TTACTTCATGAAGAAAAAATATGCAAATTTTATTTTTTCATAAGTTAAAA
TTAAAGATTACTTTTTTTAT
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Coding sequence (CDS) from alignment at Vu08:2145780..2154749-

>Vigun08g024900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g024900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g024900.1; organism=Vigna unguiculata; type=CDS; length=1506bp; location=Sequence derived from: Vu08:2145780..2154749- (Vigna unguiculata
ATGGAAGACGGCGAAACGACGGAGGAGGTGGTTGTCGTTCCGGTTTCCAA
TAGCGACGGCGTCGGTGACGAGCAAATGTTTCCGCATTCCCCACGACAAT
GCGATTCGGAAGAGGAGTCTCCGCACGAATCGTTGCGTAAAACGAAAGCT
TCAATAGAAAACGCCGTCGCCGAGATTATCGCTCTGAAGAAACATGCCGA
ACCCAAACCGCTCCTCACTCTCCGACTCAGAGAGCTGCTCACTCAAACGT
TCCTCCATTTCGTCACTCTTCGCCAGGCCAATCGCTCCATCTTGTTGGAG
GAGGAGCATGCGAGAACGGAAACTGAGCGTGCGAAGGCGCCTCTGGAACT
CACCACGCAGCAGCTTCAGAACCTGATGTACGAGAAGAGTCACTACGTGA
AGGCAATAAAGGCGTGTAACGATTTCAAGTCCAAGTATCCTGATATTGAG
GTGGTGTCGGAGGGAGAGTTTTTTCGTGACGCACCGCAGGACATGAAGGA
CTCCGTTTTGTGTAGCCACAGTGAACATAATCTCGTGCTGAAGAGACTCA
ATTTTGAGTTGTTTCAGCGCAAAGAGCTTTGCAAGCTTCATGACAAACTG
GAGCAGAAAAAGAAAACTCTTTTGGAGACAATTGCAAACCGAAAGAAGTT
CTTGTCTAGCCTCCCTTCACATCTCAAGTCTCTAAAGAAAGCATCCTTGC
CAGTGCAAAATCAACTAGGAGTTCAGCATACTAAGAAACTAAAGCGGCAT
CACTCAGCAGAGTTGCTTCCACCACCTCTTTATGTGATTTACTCACAACT
GTTGGCTCAAAAGGAGGCGTTTGGAGAATCTATTGATGTGGAGATTGTAG
GAAGTGTCAAAGATGCTCAAAATTTTGCCCACATTCAAGCTCACAAGGAC
ACTGGCATTTCCACTACGGTAGAGAGTCCGAAATTGGAAAATGATGAACC
TGATGAAGATGGTCAGAGACGGAGTAAAAGGCCAAGGAGGTTTCAAGGCA
AGGAGAGCCTTGACCAACCAGGAATATTTCAAGTTCACCCACTTACAGTC
AATCTCCATATTTATGATGACGAAGTCTCTGATTTAGAGTCTGCTAAACT
TGTTACTCTAAATTTTGAGTACATGATGCAGTTGAATATTATATGTGTCG
GGATCAAAGCATCTAATGTTGGTCCTGAGAATGACATCTTAAGCAATTTG
TTTCCTGATGACACAGGTCTCGAGCTTCCTCACCAGTCAGCTAAGCTCTA
TGTTGGGGATGCTGTAATGTTTAATGGCGATAGAACTTCACGTCCTTACA
AATGGGCTCAGCACCTGGCCGGTATTGATTTCTTGCCCGAGGTGGCTCCA
TTGCTGCTTGCTAGACGTGAAACTCCAGACGGTGGTGAAGGAGCCAAAGG
CGAAGATTTCTTACCTAGTCTTTCACATTATCGCCAGCATAACCGATTGC
AGACAGTTCTGCAGAAAATTCGCTCAAGGATAAAAGCACGTTTGGTTCTT
CAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019163THO_Thoc5