Vigun08g027300.2
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: FB37_ARATH (F-box protein At1g47056 OS=Arabidopsis thaliana OX=3702 GN=At1g47056 PE=2 SV=1) HSP 1 Score: 593.193 bits (1528), Expect = 0.000e+0 Identity = 303/438 (69.18%), Postives = 361/438 (82.42%), Query Frame = 1 Query: 190 DYISDLPNECLASVFQFLSSADRNRCSLVCQRWLQIEGQSRHRLSLNAESELFSAIPSLFSRFDSVTKLALKCDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERLQISDIGLQAIANYSNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGCPNLXXXXXXXXXXXTPEGGDWLRRTRGSVAVNLDTGEAELQEASASD--GGAQENGLEFPQM 1497 DY S LP+ECLA VFQFL+S +R RC+LVC+RW+ +EGQ+R+RLSL+A S+L ++IPSLFSRFDSVTKL+LKCDRRSVSI D++LV IS RC NL RLKLRACRELTD GM FA+NCK LK SCGSC FG+KG+ AVLD+C+ LEELS+KRLRG TD A E IGPGVA SSLK+ICLKELYNGQCFG +I+GAKNLK+LKLFRCSGDWD L Q M+ + +VE+HLER+Q+SD+ L AI+ S+LE LHLVKTPEC++ GL AIA++CK LRKLHIDGWKAN IGD+GL+ VAK C L ELVLIGVNPT SL MLA+ C NLERLALCG D+ GDPE+SCIAAKC AL+KLCIK+CP+SD G+E LANGCP L KVK+KKCKGV DWLR R ++VN DT E E +EA+++D GG+QENG+EFPQ+ Sbjct: 38 DYTSSLPDECLALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLFSRFDSVTKLSLKCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTDIAP-EMIGPGVAASSLKSICLKELYNGQCFGPVIVGAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIHLERMQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIENLANGCPGLTKVKIKKCKGVLGGCADWLRTVRPMLSVNADTMEQEHEEAASNDVVGGSQENGIEFPQL 474
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: FBL8_ARATH (Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana OX=3702 GN=FBL8 PE=4 SV=1) HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0 Identity = 298/491 (60.69%), Postives = 367/491 (74.75%), Query Frame = 1 Query: 40 RRERDQGNRSVNISKTRSTASVSPMVSYSCGSGEGDSENRRVEAVTDGTTDYISDLPNECLASVFQFLSSADRNRCSLVCQRWLQIEGQSRHRLSLNAESELFSAIPSLFSRFDSVTKLALKCDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERLQISDIGLQAIANYSNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGCPNLXXXXXXXXXXXTPEGGDWLRRTRGSVAVNLDTGEAELQEASASDGGAQENGLEFP----QMP 1500 RR Q SKT T+ V P + R + D DYIS+LP+ECL+ +FQ L+ AD RCSLVC+RWL IEGQ RHRLSL A+S+L S IPSLF+RFDSVTKL L+ DRRS+ I D++ V+IS RC NLTRLKLR C E++D G+ F +NC+ LKK+S GSC FG KGMNA+L+ C LEELSVKRLRGI A AE IGPG A SLK ICLKEL+NGQCF L+ GAK L+ LK+FRCSGDWDR+F+ + D++ +VE+HLER+Q+SD+GL A++ S +E+LHLVKTP+C+++GL +A+RCKLLRKLHIDGWK NRIGD+GLI VAK C NL ELVLIGVNPTK SLE + SNC NLERLALCGSD+VGD E+ CIA KC+AL+KLCIK+CP++D G++AL NGCPNL+KVKVKKC+GVT +G D LR+ R + VNLD E + E S +GGAQEN +EFP Q+P Sbjct: 35 RRRMGQSTSKFRRSKTTFTSPVLPNL-------------REQNSGADEPYDYISNLPDECLSLIFQSLTCADLKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLFTRFDSVTKLVLRSDRRSLGICDNAFVMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRSLKKVSFGSCGFGVKGMNALLNTCLGLEELSVKRLRGI--GAGAELIGPGGAAGSLKVICLKELHNGQCFAPLLSGAKGLRILKIFRCSGDWDRVFEAVRDKVNAIVEIHLERIQMSDLGLTALSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGVNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCIKNCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRRALLVVNLDAPETPIVEGSVGEGGAQENAVEFPPSRLQIP 510
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: SKIP2_ARATH (F-box protein SKIP2 OS=Arabidopsis thaliana OX=3702 GN=SKIP2 PE=1 SV=1) HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0 Identity = 274/436 (62.84%), Postives = 342/436 (78.44%), Query Frame = 1 Query: 190 DYISDLPNECLASVFQFLSSADRNRCSLVCQRWLQIEGQSRHRLSLNAESELFSAIPSLFSRFDSVTKLALKCDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERLQISDIGLQAIANYSNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGCPNLXXXXXXXXXXXTPEGGDWLRRTRGSVAVNLDTGEAELQEASASDGGAQENGLEFPQM 1497 D+ DLP+ECLA VFQFL + DR RCSLVC+RWL ++GQSRHRLSL+A+ E+ S + S+F+RFDSVTKLAL+CDR+SVS+ D++L +IS RC NLTR+KLR CRE+TD GME FAKNCK LKKLS GSC FG+KG+NA+L++C LLEELSVKRLRGI +AA + + SSL++ICLKEL NGQ F L+ + LKTLK+ RC GDWD++ Q++A+ + + E+HLERLQ+SDIGL AI+ SN+E LH+VKTPECS+ GL+ +A+RCKLLRKLHIDGW+ NRIGD+GL+ VAK C NL ELVLIGVN T SL +ASNC+ LERLALCGS ++GD EI+CIA KC AL+K CIK CPVSD+G+EALA GCPNLVK+KVKKCK VT E GDWLR R ++ V++D E EA G E +E P++ Sbjct: 41 DFTGDLPDECLAHVFQFLGAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMFNRFDSVTKLALRCDRKSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICLKELVNGQVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIANGKSSLSEIHLERLQVSDIGLSAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGEIGDWLREQRRTLVVSMDGDET---EAVVVVDGEVETVVEEPRV 473
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: FBL16_ARATH (F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana OX=3702 GN=FBL16 PE=2 SV=1) HSP 1 Score: 489.96 bits (1260), Expect = 4.075e-168 Identity = 248/431 (57.54%), Postives = 332/431 (77.03%), Query Frame = 1 Query: 178 DGTTDYISDLPNECLASVFQFLSSADRNRCSLVCQRWLQIEGQSRHRLSLNAESELFSAIPSLFSRFDSVTKLALKCDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERLQISDIGLQAIANYSNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGCPNLXXXXXXXXXXXTPEGGDWLRRTRGSVAVNLDTGEAELQEASASDGGAQ 1470 DG D+ ++LP++CLA +FQFLS+ DR RCSLV +RWL ++GQ+RHRLSL+A+SE+ +P +F+RFDSVTKLAL+CDRRS S+ D++L ++S RC NL R+KLR CRE+TD GME FA+NCK L+KLSCGSCTFG+KG+NA+L++C +LEELS+KR+RG+ + A EPI ++ +SL+++ LKEL NGQ FG+L+ + LK +K+ RC G+WDR+F++ + + + E+ LERLQ++DIGL I+ SNLE LH+VKTP+CS++GL ++ +RCKLLRKLHIDGW+ RIGD GL+ VAK C NL ELVLIGV+ T SL +ASNC+ LERLALCGS ++GD EI CIA KCV L+K CIK C +SD G++ALA GCP LVK+KVKKC VT E +WLR R ++ V++D + E DGG Q Sbjct: 35 DGDYDFTANLPDDCLAHIFQFLSAGDRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIFNRFDSVTKLALRCDRRSFSLSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCGSCTFGAKGINAMLEHCKVLEELSLKRIRGLHELA--EPIKLSLS-ASLRSVFLKELVNGQVFGSLV-ATRTLKKVKIIRCLGNWDRVFEMNGNGNSSLTEIRLERLQVTDIGLFGISKCSNLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKLERLALCGSGTIGDAEIGCIAEKCVTLRKFCIKGCLISDVGVQALALGCPKLVKLKVKKCSLVTGEVREWLRERRMTLVVSMD--DDETNGVGLVDGGDQ 459
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: FBL4_ARATH (F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana OX=3702 GN=FBL4 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.206e-25 Identity = 123/447 (27.52%), Postives = 184/447 (41.16%), Query Frame = 1 Query: 205 LPNECLASVFQFLSSA-DRNRCSLVCQRWLQIEGQSRHRLSLNAESELFSAIPSLFSRFDSVTKLALKCDRR-------------------------------------------SVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPI--------GPGVAGSSLKTICLKELYNGQCFGTLIL-----------------GAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERLQ-ISDIGLQAIANYS-NLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVNPT-KASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSC-PVSDQGMEALANGCPNL 1326 LP E + +F+ L S +R+ CSLVC+RWL +E SR L + A I L RF +T + + D R S S+ D L ++ P + L L C ++ G+ A+ C LK L C G +G+ AV C LEEL+++ G+TD + + GVA S+ T E C +L G LK LKL +C D F + + T + + L Q +D G++AI S L+ L L S GL AIA CK L ++ I+G + IG G+ + K CP L EL L+ ++L+ + C++LE L L +GD + IA C LKKL I+ C + ++G+ ++ C +L Sbjct: 11 LPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLSRRFLYITSIHV--DERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKL-QCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING--CHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSL 452 HSP 2 Score: 89.7373 bits (221), Expect = 1.341e-17 Identity = 91/323 (28.17%), Postives = 144/323 (44.58%), Query Frame = 1 Query: 394 LALKCDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSCTFGS-KGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQC--FGTLIL-----GAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLER-LQISDIGLQAIANY-SNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLEL-VLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCP-VSDQGMEALANGCPNL 1326 L L+C VS+ D + + + C +L RL L + + TD GM K K LK L+ C F S KG+ A+ C LE + + I E IG LKEL C G L G K+L+ L L CSG D +A + ++H+ R +I + G+ +I + +L L L + + L+AI C L ++L++ G N+I D G+ +A+GCP L L + + N L L C L+ L L + D ++ + KC L+ + CP ++ G+ + + CP++ Sbjct: 274 LKLQC----VSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNI-GTRGIEAIGKSCPR-------LKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSL-QQLNVSG--CNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHI 581
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: FBXL7_MOUSE (F-box/LRR-repeat protein 7 OS=Mus musculus OX=10090 GN=Fbxl7 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.664e-21 Identity = 101/386 (26.17%), Postives = 162/386 (41.97%), Query Frame = 1 Query: 196 ISDLPNECLASVFQFLSSADRNRCSLVCQRWLQIEGQSRHRLSLNAESELFSAIPSLFSRFDSVTKLALKCDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSC-TFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQCF-------GTLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERLQ-ISDIGLQAIANY-SNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVNP--TKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGC 1317 I LP+ + +F FL + RC+ VC+RW + R ++ E + ALK R + ++ L+ L + + CR LTD G+ A+ C L++L C ++ + V+ C LE L V +T + ++ K I ++ L CF T+ L L L RC D + + T + E+ + + +SD GL+ IA S L L + +D+G+ +A C LR L+ G + I D G+ +AK C L L IG P + LE LA NC NL+RL+L +S+ + +AA C L+ L ++ C VS + + + C Sbjct: 114 IDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETINV------------DRALKVLTRRLCQDTPNVCLM------LETVIVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNARGCEG--ITDHGVEYLAKNCTKLKSLD-IGKCPLVSDTGLESLALNCFNLKRLSLKSCESITGQGLQIVAANCFDLQMLNVQDCEVSVEALRFVKRHC 478
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: FBXL7_HUMAN (F-box/LRR-repeat protein 7 OS=Homo sapiens OX=9606 GN=FBXL7 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.292e-20 Identity = 100/386 (25.91%), Postives = 161/386 (41.71%), Query Frame = 1 Query: 196 ISDLPNECLASVFQFLSSADRNRCSLVCQRWLQIEGQSRHRLSLNAESELFSAIPSLFSRFDSVTKLALKCDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSC-TFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQCF-------GTLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERLQ-ISDIGLQAIANY-SNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVNP--TKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGC 1317 I LP+ + +F FL + RC+ VC+RW + R ++ E + ALK R + ++ L+ L + + CR LTD G+ A+ C L++L C ++ + V+ C LE L V +T + ++ K I ++ L CF T+ L L L RC D + + + E+ + + +SD GL+ IA S L L + +D+G+ +A C LR L+ G + I D G+ +AK C L L IG P + LE LA NC NL+RL+L +S+ + +AA C L+ L ++ C VS + + + C Sbjct: 114 IDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETINV------------DRALKVLTRRLCQDTPNVCLM------LETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNARGCEG--ITDHGVEYLAKNCTKLKSLD-IGKCPLVSDTGLECLALNCFNLKRLSLKSCESITGQGLQIVAANCFDLQTLNVQDCEVSVEALRFVKRHC 478
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: YKK7_CAEEL (Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis elegans OX=6239 GN=C02F5.7 PE=4 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 7.276e-19 Identity = 100/379 (26.39%), Postives = 172/379 (45.38%), Query Frame = 1 Query: 205 LPNECLASVFQFLSSADRNRCSLVCQRW--LQIEGQSRHRLSL-NAESELFSAIPSLFSRF--DSVTKLALK-CDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSC-TFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLER-LQISDIGLQAIAN-YSNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVN-PTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKC-VALKKLCIKSCP-VSDQGMEAL 1305 LP E L VF FL + R + VC+ W L ++G + R+ L + ++ +A+ +R + +L+LK C+ ++ D +L + RCPNL L L C+ +TDA E + C L L+ +C + + M + D C L L++ I D ++ K+L TL L C G + +F + M + +++L + Q++DI +Q IAN + LE L + + SD LV++ L+ L + G +GD+G I +A+GC L L + + + ++ LA+NC L L+L + + D I +A+K L L + +CP ++D + L Sbjct: 60 LPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKTAVVENLARRCGGFLKELSLKGCE----NVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQ---------------------------IILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSG--CTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESIQNLASKHRETLNVLELDNCPQLTDSTLSHL 405
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: FBXL7_DANRE (F-box/LRR-repeat protein 7 OS=Danio rerio OX=7955 GN=fbxl7 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.318e-18 Identity = 97/391 (24.81%), Postives = 160/391 (40.92%), Query Frame = 1 Query: 205 LPNECLASVFQFLSSADRNRCSLVCQRWLQIEGQSRHRLSLNAESELFSAIPSLFSRFDSVTKLALKCDRRSVSIRDDSLVLISQR--------CPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSC-TFGSKGMNAVLDNCALLEELSVKRLRGITDAAAAEPIGPGVAGSSLKTICLKELYNGQCFG-------TLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERLQ-ISDIGLQAIANYS-NLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKGCPNLLELVLIGVNP--TKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGC 1317 LP+ +F L + RC+ VC+RW + R R +T L DR +L ++++R C + + + CR LTD G+ A++C L++L C ++ + V+ C LE L V +T + + ++ + I ++ L CF T+ L L L RC D + + + E+ + + ISD GL+ IA L L + +D+G+ +A C LR L+ G + + D G+ +AK C L L IG P + A LE LA N NL+RL+L +S+ + +AA C L+ L ++ C VS + + + C Sbjct: 115 LPDHAFLQIFTHLPTNQLCRCARVCRRWYNLAWDPR------------------LWRTIRLTGDVLHVDR--------ALRVLTRRLCQDTPNVCLTVETVMVSGCRRLTDRGLYTVAQSCPELRRLEVAGCYNVSNEAVFEVVSRCPNLEHLDVSGCSKVTCISLTRDVSVKLSPLHGQQISIRFLDMTDCFALEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRFLVIYCPGVRELSVSDCRFISDFGLREIAKLEGRLRYLSIAHCSRITDVGVRYVAKYCSRLRYLNARGCEG--LTDHGIEHLAKSCLKLKSLD-IGKCPLVSDAGLEQLALNSFNLKRLSLKSCESITGRGLQVVAANCFDLQLLNVQDCDVSLEALRFVKRHC 476
BLAST of Vigun08g027300.2 vs. DB:Swiss
Match: FXL20_HUMAN (F-box/LRR-repeat protein 20 OS=Homo sapiens OX=9606 GN=FBXL20 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.555e-13 Identity = 99/370 (26.76%), Postives = 163/370 (44.05%), Query Frame = 1 Query: 205 LPNECLASVFQFLSSADRNRCSLVCQRW--LQIEGQSRHRLSL-----NAESELFSAIPSLFSRFDSVTKLALKCDRRSVSIRDDSLVLISQRCPNLTRLKLRACRELTDAGMEVFAKNCKGLKKLSCGSCT-FGSKGMNAVLDNCALLEELSVK-----------------------RLRGIT--DAAAAEPIG---PGVAGSSLKTICLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRMTKMVEVHLERL-QISDIGLQAIA-NYSNLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDDGLIGVAKG--CPNLLELVLIGVNP--TKASLEMLASNCQNLERLAL 1188 LP E L +F FL RC+ V + W L ++G + R+ L + E + I F + KL+L R + + D++L +Q C N+ L L C + TDA +K C L+ L SCT + + A+ + C LLE+L++ L+G T + A + IG P + +L+T CL+ G T+ G L++L CS D + + ++ + + R Q++D+G +A N LE + L + + +D L+ ++ C L+ L + I DDG+ + G + LE++ + P T ASLE L S C +LER+ L Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGF--LRKLSL---RGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQT-CLQITDEG--LITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLS--HCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKS-CHSLERIEL 386 The following BLAST results are available for this feature:
BLAST of Vigun08g027300.2 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g027300.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g027300.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g027300.2; organism=Vigna unguiculata; type=mRNA; length=3085bpback to top protein sequence of Vigun08g027300.2_Vu_IT97K-499-35_v1.1 >Vigun08g027300.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g027300.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g027300.2_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=551bpback to top mRNA from alignment at Vu08:2448639..2451860- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g027300.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g027300.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g027300.2; organism=Vigna unguiculata; type=mRNA; length=3222bp; location=Sequence derived from: Vu08:2448639..2451860- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:2448639..2451860- >Vigun08g027300.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g027300.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g027300.2; organism=Vigna unguiculata; type=CDS; length=1653bp; location=Sequence derived from: Vu08:2448639..2451860- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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