Vigun08g039300.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HSFA2_ARATH (Heat stress transcription factor A-2 OS=Arabidopsis thaliana OX=3702 GN=HSFA2 PE=1 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 1.257e-103 Identity = 167/350 (47.71%), Postives = 222/350 (63.43%), Query Frame = 1 Query: 91 PQPMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRRVS-QSMQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLV---HKTPQMLDAEINRKRRLIAGQSLENLQQDDPVTLMDYSNQQDLATMEPEMNTFFSPAFDSELGHEI---KESALDSDITAGQSYFGDTXXXXXXXXXXVSGDPKDEVIIGDC---SQIGVPMEDLVAYPDDW---------NHMNHSGSEP 1083 P+PMEGLNE G PPFLTK Y+MVED +TD+VVSWS NSFVVWDSH FST +LPRYFKH+NFSSFIRQLNTYGFRK+DPDRWEFANEGFLAGQ+HLLK IKRRR + Q++ ++G G +CVEVG++G +GE+ERLKRD +L+AE+VRLR Q+ +S+ Q++AME RL TEK+Q +MM FLAKAL NP+F+QQ + + ++ RKRRL + SL +++ + + Q+ M+ +M F+ A D E + + +E L++ V++ D + + V +EDLV P DW + M GSEP Sbjct: 31 PRPMEGLNETGPPPFLTKTYEMVEDPATDTVVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEVERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQQFAVMSKEKKSLFGLDVGRKRRLTSTPSLGTMEE-------NLLHDQEFDRMKDDMEMLFAAAIDDEANNSMPTKEEQCLEA----------------------------MNVMMRDGNLEAALDVKVEDLVGSPLDWDSQDLHDMVDQMGFLGSEP 345
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum OX=4082 GN=HSF30 PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 2.220e-100 Identity = 155/278 (55.76%), Postives = 200/278 (71.94%), Query Frame = 1 Query: 97 PMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRRVSQSMQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLVHKTPQMLDA---EINRKRRLIAGQSLENLQQDDPVTLMDYS-----NQQDLATMEPEMNTFFSPAFDSELGHEIKESALDSDITA 906 PMEGL++VG PPFL+K Y+MVED STD V+SWST+ NSF+VWDSH FST +LPR+FKH+NFSSFIRQLNTYGFRKVDPDRWEFANEGFL GQ+HLLK IKRRR V QSM ++G GAC+E+G +G E ELERLKRD N+LM EIV+LR Q++++R+Q+ AM +++ E+KQ +MM FLAK NP+F+QQ + K D E+ +KRRL S+ D P M+YS ++ +LA++E FS A D+E ++ DS +TA Sbjct: 20 PMEGLHDVGPPPFLSKTYEMVEDSSTDQVISWSTTRNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVGQSMNQQG-SGACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQQQSTRNQIIAMGEKIETQERKQVQMMSFLAKIFSNPTFLQQYLDKQVHRKDKQRIEVGQKRRLTMTPSVTG--SDQP---MNYSSSLQESEAELASIE----MLFSAAMDNESSSNVRP---DSVVTA 284
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HFA2B_ORYSJ (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2B PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 8.642e-90 Identity = 127/216 (58.80%), Postives = 165/216 (76.39%), Query Frame = 1 Query: 91 PQPMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRRVSQSMQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLVHKT---PQMLDAEINRKRRLI 729 P+PMEGL++ G PPFLTK YDMV+D TD+ VSWS + NSFVVWD H F+T +LPR+FKHNNFSSF+RQLNTYGFRKVDPDRWEFANE FL GQRHLLK IKRR+ S + + G +EVG FG + E++RLKRD +LMAE+V+LR +++N++ L AME RLQ TE++Q +MM FLA+ +KNP F++QL+ + ++ DA ++RR I Sbjct: 39 PRPMEGLHDAGPPPFLTKTYDMVDDAGTDAAVSWSATSNSFVVWDPHAFATVLLPRFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANENFLRGQRHLLKNIKRRKPPSHTASNQQSLGPYLEVGHFGYDAEIDRLKRDKQLLMAEVVKLRQEQQNTKANLKAMEDRLQGTEQRQQQMMAFLARVMKNPEFLKQLMSQNEMRKELQDAISKKRRRRI 254
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HFA2D_ORYSJ (Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2D PE=2 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 1.151e-88 Identity = 126/213 (59.15%), Postives = 166/213 (77.93%), Query Frame = 1 Query: 88 TPQPMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRRVSQSMQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLVHKTPQM--LDAEINRKR 720 P+PMEGL+EVG PPFLTK +D+V D +TD VVSW + +SFVVWD H F+ LPR+FKHNNFSSF+RQLNTYGFRK+DPDRWEFAN+GFL GQRHLLK IKRRR +S + G C+EVG+FG + E++RLKRD NIL+AE+V+LRH++++++ + AME RLQ E+KQ +MM FLA+A++NP F QL+H+ +M L+ ++KR Sbjct: 23 APRPMEGLHEVGPPPFLTKTFDLVADPATDGVVSWGRAGSSFVVWDPHVFAAVFLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANDGFLRGQRHLLKMIKRRRPLSYLPGSQQALGTCLEVGQFGLDEEIDRLKRDKNILLAEVVKLRHKQQSTKANMRAMEERLQHAEQKQVQMMGFLARAMQNPDFFHQLIHQQDKMKGLEDTFSKKR 235
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HFA2E_ORYSJ (Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2E PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 1.657e-87 Identity = 126/225 (56.00%), Postives = 172/225 (76.44%), Query Frame = 1 Query: 91 PQPMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRRVSQSMQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLVHKTPQMLDAE----INRKRRLIAGQSLENL 753 P+PM+GL + G PPFLTK YDMV+D +TD+VVSWS + NSFVVWD H F +LPRYFKHNNFSSF+RQLNTYGFRKVDPD+WEFANEGFL GQ+HLLK+IKRR+ + S ++ + G+ +EVG FG EGE+++LKRD ++LMAE+V+LR +++N++ L AME +LQ TE+KQ MM FL++ + NP F++QL ++ + E R+RR+ G L+++ Sbjct: 25 PRPMDGLADGGPPPFLTKTYDMVDDPTTDAVVSWSATNNSFVVWDPHLFGNVLLPRYFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLRGQKHLLKSIKRRKPPNSSPSQQSL-GSFLEVGHFGYEGEIDQLKRDKHLLMAEVVKLRQEQQNTKSDLQAMEQKLQGTEQKQQHMMAFLSRVMHNPEFIRQLFSQSEMRKELEEFVSKKRRRRIDQGPELDSM 248
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2C PE=1 SV=2) HSP 1 Score: 259.61 bits (662), Expect = 5.550e-83 Identity = 133/216 (61.57%), Postives = 170/216 (78.70%), Query Frame = 1 Query: 88 TPQPMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRRVSQS--MQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLVHKTPQM--LDAEINRKRR 723 P+PMEGL+EVG PPFLTK YD+VED +TD VVSWS + NSFVVWD H F+ +LPR FKHNNFSSF+RQLNTYGFRKVDPDRWEFANEGFL GQRHLLK IKRR+ S + Q++ + +C+EVGEFG E E++RLKRD NIL+ E+V+LR +++ ++D + AME RL+A E+KQ +MM FLA+A++NP F QQL + + L+ I++KRR Sbjct: 28 APRPMEGLHEVGPPPFLTKTYDLVEDPATDGVVSWSRAGNSFVVWDPHVFADLLLPRLFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKTIKRRKPPSNAPPSQQQSL-TSCLEVGEFGFEEEIDRLKRDKNILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQVQMMGFLARAMRNPEFFQQLAQQKEKRKELEDAISKKRR 242
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HFA6B_ARATH (Heat stress transcription factor A-6b OS=Arabidopsis thaliana OX=3702 GN=HSFA6b PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 2.535e-82 Identity = 123/232 (53.02%), Postives = 170/232 (73.28%), Query Frame = 1 Query: 91 PQPMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRRVSQS--------MQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLVHKTPQMLDAE--INRKRRLIAGQSLENLQ 756 PQP+EGL+E G PPFLTK YD+VED T+ VVSWS S NSF+VWD FS +LPR+FKHNNFSSF+RQLNTYGFRKV+PDRWEFANEGFL GQ+HLLK I+RR+ + S +++ + C+EVG +G +GE++ L+RD +LM E+VRLR Q+++++ L+ +E +L+ TE KQ +MM FLA+A++NP F+QQLV + + + E I++KR+ Q N++ Sbjct: 48 PQPLEGLHESGPPPFLTKTYDLVEDSRTNHVVSWSKSNNSFIVWDPQAFSVTLLPRFFKHNNFSSFVRQLNTYGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRKTSNNSNQMQQPQSSEQQSLDNFCIEVGRYGLDGEMDSLRRDKQVLMMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAMQNPDFIQQLVEQKEKRKEIEEAISKKRQRPIDQGKRNVE 279
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HFA2A_ORYSJ (Heat stress transcription factor A-2a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2A PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.388e-81 Identity = 120/229 (52.40%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 91 PQPMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRR-----------RVSQSMQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLVHKTP-------QMLDAEINRKRR 723 P+PMEGL E G PPFL K Y++V+D TD+V+SW + NSFVVWD++ F+ +LPRYFKH+NFSSF+RQLNTYGFRKVDPDRWEFANEGFL G++ LLK IKRRR S S ++ AC+EVG+FG +G + RL+RD ++L+AE+V+LR +++ +R Q+ AME R+ A E+KQ +M +FLA+A+KNP F+Q LV + ++L+ +++KRR Sbjct: 40 PRPMEGLGEAGPPPFLCKTYEVVDDPGTDTVISWGFAGNSFVVWDANAFAAVLLPRYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGKKELLKTIKRRRPPPSSPPSSSSSSSSSQHQQQPAAACLEVGQFGRDGVVNRLQRDKSVLIAEVVKLRQEQQTTRAQMQAMEERISAAEQKQQQMTVFLARAMKNPGFLQMLVDRQAGQHGARNRVLEDALSKKRR 268
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana OX=3702 GN=HSFA1D PE=1 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 4.740e-77 Identity = 115/205 (56.10%), Postives = 149/205 (72.68%), Query Frame = 1 Query: 91 PQPMEGLNEVGTPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRR----------RVSQSMQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLV 675 PQP L+ PPFL+K YDMV+DH+TDS+VSWS + NSF+VW F+ ++LP+ FKHNNFSSF+RQLNTYGFRKVDPDRWEFANEGFL GQ+HLL++I RR+ R S + ACVEVG+FG E E+ERLKRD N+LM E+VRLR Q++++ +QL M RLQ E +Q ++M FLAKA+++P F+ Q + Sbjct: 24 PQPAAILSSNAPPPFLSKTYDMVDDHNTDSIVSWSANNNSFIVWKPPEFARDLLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQGQGHQRSQHSNGQNSSVSACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMENRQQQLMSFLAKAVQSPHFLSQFL 228
BLAST of Vigun08g039300.1 vs. DB:Swiss
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana OX=3702 GN=HSFA1A PE=1 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 2.710e-76 Identity = 122/230 (53.04%), Postives = 157/230 (68.26%), Query Frame = 1 Query: 91 PQPMEGLNEVG-TPPFLTKIYDMVEDHSTDSVVSWSTSCNSFVVWDSHNFSTNILPRYFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQRHLLKAIKRRRRV---------------SQSMQERGVGGACVEVGEFGPEGELERLKRDSNILMAEIVRLRHQERNSRDQLSAMETRLQATEKKQHKMMLFLAKALKNPSFMQQLVHKT--PQMLDAEINRKRRL 726 P P LN PPFL+K YDMVED +TD++VSWS + NSF+VWD FS ++LP+YFKHNNFSSF+RQLNTYGFRKVDPDRWEFANEGFL GQ+HLLK I RR+ V SQ +CVEVG+FG E E+E+LKRD N+LM E+V+LR Q++ + ++L + LQ E++Q ++M FLAKA++NP+F+ Q + K M E N+KRRL Sbjct: 38 PHPATLLNANSLPPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAVQNPTFLSQFIQKQTDSNMHVTEANKKRRL 267 The following BLAST results are available for this feature:
BLAST of Vigun08g039300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g039300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g039300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g039300.1; organism=Vigna unguiculata; type=mRNA; length=1831bpback to top protein sequence of Vigun08g039300.1_Vu_IT97K-499-35_v1.1 >Vigun08g039300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g039300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g039300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=362bpback to top mRNA from alignment at Vu08:3846347..3848728+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g039300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g039300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g039300.1; organism=Vigna unguiculata; type=mRNA; length=2382bp; location=Sequence derived from: Vu08:3846347..3848728+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:3846347..3848728+ >Vigun08g039300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g039300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g039300.1; organism=Vigna unguiculata; type=CDS; length=1086bp; location=Sequence derived from: Vu08:3846347..3848728+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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