Vigun08g041200.1

Transcript Overview
NameVigun08g041200.1
Unique NameVigun08g041200.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2061
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:4212840..4216882 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR372Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL093Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL097Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL621Pisum sativum Cameor genome v1aPisum sativum
psvuL640Pisum sativum Cameor genome v1aPisum sativum
pvvuL061Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL785Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL337Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0583Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL417Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0621Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1122Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0118Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0320Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0360Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0749Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0750Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL529Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL704Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR588Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR608Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL297Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL309Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL276Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL288Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL450Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL421Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL383Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL403Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL560Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR410Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL386Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL470Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL599Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL324Cicer arietinum
carvuL394Cicer arietinum
carvuL404Cicer arietinum
ccavuL327Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL433Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR660Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR669Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR677Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR679Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR680Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR715Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL238Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL253Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL677Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL691Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR463Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g211160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr01.248Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_004498797.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg35575.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
XM_058869013.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-KK1_035465Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_09140Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.03G250300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
LR48_mrnaVigan07g253700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cc_v2.0_11415.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_09853Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014648026.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va07G065170.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr08.336Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.03G156500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Tiffany.R1.3g173800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.001G039100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_03G01745.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat06G0061700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g041200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g041200Vigun08g041200_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g041200.1Vigun08g041200.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g041200.1_Vu_IT97K-499-35_v1.1Vigun08g041200.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g041200.1.v1.1.five_prime_UTR.1Vigun08g041200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g041200.1.v1.1.CDS.1Vigun08g041200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.2Vigun08g041200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.3Vigun08g041200.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.4Vigun08g041200.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.5Vigun08g041200.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.6Vigun08g041200.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.7Vigun08g041200.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.8Vigun08g041200.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.9Vigun08g041200.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041200.1.v1.1.CDS.10Vigun08g041200.1.v1.1.CDS.10_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g041200.1.v1.1.three_prime_UTR.1Vigun08g041200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: ACL5_ARATH (Thermospermine synthase ACAULIS5 OS=Arabidopsis thaliana OX=3702 GN=ACL5 PE=1 SV=1)

HSP 1 Score: 504.212 bits (1297), Expect = 3.058e-179
Identity = 240/337 (71.22%), Postives = 277/337 (82.20%), Query Frame = 1
Query:  106 MGEA-PVFYINGFSKFEHEIXXXXXXXXXXXXSSWYEEIIDEDLKWSFKLNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIANREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDEPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPGHGMAFR 1113
            MGEA  V + NGF +          ++    D  WYEE ID+DLKWSF LNSVLH+  SEYQDI LLDTKRFGK LV+DGKMQSAE DEFIYHECLIHP+LL HPNPKTVFIMGGGEGSAARE L+H ++++VVMCDID+EVVDFC+++L  N +AF NKKL+LVI DAK EL KR+EKFDIIVGDLADP+E GPCYQLYTKSFY+ ILKPKL+ NGIFVTQAGPAGIFTHKEVFTSIYNT+KQVFKYV AYT HVPSFADTWGWVMASD    +  +EMDRRI ER++GEL+YLN   F S+ T+NKT+  +L+ ET VY+EENARFI GHG+A+R
Sbjct:    1 MGEAVEVMFGNGFPEIHKATSPTQTLHSNQQDCHWYEETIDDDLKWSFALNSVLHQGTSEYQDIALLDTKRFGKVLVIDGKMQSAERDEFIYHECLIHPALLFHPNPKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNSDAFCNKKLELVIKDAKAELEKREEKFDIIVGDLADPVEGGPCYQLYTKSFYQNILKPKLSPNGIFVTQAGPAGIFTHKEVFTSIYNTMKQVFKYVKAYTAHVPSFADTWGWVMASDHEFDVEVDEMDRRIEERVNGELMYLNAPSFVSAATLNKTISLALEKETEVYSEENARFIHGHGVAYR 337          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE_SULTO (Polyamine aminopropyltransferase OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=speE PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 5.318e-73
Identity = 126/285 (44.21%), Postives = 173/285 (60.70%), Query Frame = 1
Query:  250 LNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDE--PLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPG 1095
            +  V+ +  + YQ   L++  RFGKAL+LDGK+QS  TDEFIYHE L+HP LL   NP+ + I+GGGEG+  RE L+H+++  V M DID  V+DF KKYL   ++ AF N K  LVI D    + + KEKFD +V DL DP++D P   LYTK FYE++   +++  GI      P+      E F+ IYNTIK VFK V A  T+VP+F   WG+V ASDE  P     EE++ RI ERIDG L + +G    +  ++ K + + L+ E  + T EN   +P 
Sbjct:   21 ITKVIAEEKTPYQRALLVELARFGKALILDGKIQSTITDEFIYHEALVHPLLLSINNPEKILILGGGEGATLREVLKHKTIKNVTMVDIDPVVIDFAKKYLQEWHQGAFDNPKSKLVIEDGYKFIKETKEKFDAVVIDLTDPIKDSPSQMLYTKEFYEEV--KRISKWGIVTQATSPSFSL---ETFSIIYNTIKHVFKKVSAGITYVPAFDGLWGFVYASDEVNPAEFSKEEINNRIKERIDGSLRFYDGETHITMFSIPKHIREVLEKENKISTRENPVAVPA 300          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE_THET8 (Polyamine aminopropyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) OX=300852 GN=speE PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.055e-64
Identity = 107/291 (36.77%), Postives = 180/291 (61.86%), Query Frame = 1
Query:  247 KLNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPL-EDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASD--EPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPGHGMA 1107
            ++  V+    + +QD  L ++K FGK L+LD  +QS E DE+IYHE L+HP++L HP PK V I+GGGEG+  RE L+H ++++ VM DID E+V+  K+++   ++ AF + +  LVI+DA+  L + +E++D+++ DL DP+ ED P   LYT  FY +++K  LN  G+   QAG   + TH  V   ++ T+++ F+YV +Y  H+P F   +G+++ASD  +P +     ++ RI ER +  L +L   +  +   + K + ++L+ ET V T++N  ++   G A
Sbjct:   20 RMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFY-RLVKAHLNPGGVMGMQAG-MILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEARIRER-NLALRHLTAPYLEAMFVLPKDLLEALEKETMVSTDQNPFYVTPEGEA 307          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE_THET2 (Polyamine aminopropyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) OX=262724 GN=speE PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.055e-64
Identity = 107/291 (36.77%), Postives = 180/291 (61.86%), Query Frame = 1
Query:  247 KLNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPL-EDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASD--EPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPGHGMA 1107
            ++  V+    + +QD  L ++K FGK L+LD  +QS E DE+IYHE L+HP++L HP PK V I+GGGEG+  RE L+H ++++ VM DID E+V+  K+++   ++ AF + +  LVI+DA+  L + +E++D+++ DL DP+ ED P   LYT  FY +++K  LN  G+   QAG   + TH  V   ++ T+++ F+YV +Y  H+P F   +G+++ASD  +P +     ++ RI ER +  L +L   +  +   + K + ++L+ ET V T++N  ++   G A
Sbjct:   20 RMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFY-RLVKAHLNPGGVMGMQAG-MILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEARIRER-NLALRHLTAPYLEAMFVLPKDLLEALEKETMVSTDQNPFYVTPEGEA 307          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE_SULSO (Polyamine aminopropyltransferase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=speE PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 9.237e-64
Identity = 120/284 (42.25%), Postives = 178/284 (62.68%), Query Frame = 1
Query:  250 LNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNP-KTVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDEPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPG 1095
            +  VL +  + YQ +TL++  RFGK L++DGK+QS   DE IYHE L+HP LL    P K+V I+GGGEG+  RE L+++S+++ VM DID++V++F KKYL   ++ AF +K+ +LVI D    + + KEK+D I+ DL DP+++   Y LYTK FYEK L+  LN+ G  VTQA         EV+ +IYNTIK+VFK   A  T++ SF   WG+V     P  +  +E+D +I ERIDG+L + +G     S ++ K +    Q  T + TE++  ++P 
Sbjct:   21 IEKVLAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLTKPPKSVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTNLVITDGLKFIKETKEKYDAIILDLTDPIKNSTSYMLYTKEFYEK-LREILNERGGIVTQATSPSF--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVDSKINERIDGQLRFYDGYSHKISFSLPKNIKSEFQKITKISTEKDPIYVPA 301          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE_AERPE (Polyamine aminopropyltransferase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) OX=272557 GN=speE PE=3 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.031e-63
Identity = 114/304 (37.50%), Postives = 185/304 (60.86%), Query Frame = 1
Query:  202 SWYEEIIDEDLKWSFKLNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEK-FDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDEP-LSICGEE--MDRRIAERIDG-ELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPG 1095
            SW+ E +  D      +  V+ +  S +Q+I ++     GK LVLDGK QS+E+DEF+YHE L+HP+++ H +P+ V I+GGGEG+  RE L+HRS+++ VM DID+ VV+  +++L   +R AF + + ++VI+DA   +  + E  FD+++ DL DPLE GP  +LY++ +Y +++K  +N  G+FVTQA      T  E    I NT+ +VFK+V +Y  +VPSF   WG+V+ASD+    I G+    + R++ ++ G EL +L+ A       + K   +++  E    T +N  F+P 
Sbjct:   14 SWFLEWLTPDRATLKHIEDVIFQGRSRFQEIAVVRVSGEGKVLVLDGKTQSSESDEFMYHEALVHPAMILHGSPRKVLILGGGEGATLREVLKHRSVEKAVMVDIDETVVNVAREHLREWHRGAFDDPRAEVVIDDAWNYVASKAETGFDVVIADLVDPLEAGPATRLYSEEYY-RMVKDVMNPGGVFVTQAVSISHLT--EYHAIIRNTVARVFKHVESYGVYVPSFDSMWGFVVASDDKDPRILGDRGFFETRLSHQLQGAELRFLDYASMLHMLNIPKMYREAIAREKRYATLDNQVFLPA 314          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE_SULAC (Polyamine aminopropyltransferase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=speE PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.570e-61
Identity = 111/285 (38.95%), Postives = 165/285 (57.89%), Query Frame = 1
Query:  250 LNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASD--EPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPG 1095
            +  +L +  SE+Q + L +  RFGKAL++DGK+QS   DEFIYHE L+HP L+   +P+ + I+GGGEG+  REALR++S+ +V M DID  V+ F K+ L   +  +F + + +L+I D    + +  EK++ I+ DL DP++D P   LYT  FY   LK  +  NG  VTQA         + F  IY+T+K VFK V A  T+VPSF   WG++ ASD   P  +   +++ RI ER+ G L + +G        + K + + ++NE  V T EN    P 
Sbjct:   21 IKRILIEERSEFQRVILAELFRFGKALIIDGKIQSTLADEFIYHESLVHPLLISLEDPENILILGGGEGATLREALRYKSVRKVTMVDIDPVVIKFAKQNLQEWHMGSFDDSRTNLIIGDGYKFVKETNEKYNAIILDLTDPIQDSPSQLLYTSEFYRD-LKSIITPNGGLVTQATSPSF--SLDTFAIIYSTLKTVFKNVSAGITYVPSFDGLWGFIYASDVTNPAHLNRNQINDRIKERVTGSLRFYDGETHEMLFRVPKYIREKIENEKRVSTRENPVATPA 302          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE2_HYPBU (Polyamine aminopropyltransferase 2 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) OX=415426 GN=speE2 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.129e-58
Identity = 109/275 (39.64%), Postives = 157/275 (57.09%), Query Frame = 1
Query:  277 SEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASD--EPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIP 1092
            + YQ+  + +    GKALVLDGK+QS+  DE  YHE L+HP LL H  P+ V ++GGGEG+  RE LRH  ++ V M DID+E+V+  KK+L   ++ AFS+ KL+LVI D +  +     K+D I+ DL DP+E GP  +LYT  FY + +K  L   G  VTQA    +     V+  I NT+ +VF  V  Y ++V S+   WG+V ASD  +P  +  +E+D  IA RI G+L + +G        +   V Q L       T+E   ++P
Sbjct:   33 TRYQEYMIAELAGIGKALVLDGKVQSSILDEHWYHEALVHPILLAHQCPRKVLVIGGGEGATVREVLRHSCVEHVTMVDIDEELVELAKKHLAEWHQGAFSSDKLELVIGDGRRYVENCHRKYDAIILDLVDPMEGGPAARLYTLEFY-RAVKGCLRPGGAVVTQATSPTL--SPRVYAVIRNTLAKVFTIVRPYVSYVRSYNGLWGFVAASDTVDPAKLSAKEVDELIAARIRGQLRFYDGETHEWMFRLPLPVRQVLSETRDYATDEKPVYVP 304          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE_SULIY (Polyamine aminopropyltransferase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) OX=439386 GN=speE PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.179e-57
Identity = 117/284 (41.20%), Postives = 172/284 (60.56%), Query Frame = 1
Query:  250 LNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPK-TVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDEPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPG 1095
            +  V  +  + YQ +TL++  RFGK L++DGK+QS   DE IYHE L+HP LL  P P   V I+GGGEG+  RE L+++S+++ VM DID++V++F KKYL   ++ AF +K+  LVI D    + + K+K+D I+ DL DP++D   Y LYTK FYEK L+  LN  G  VTQA         EV+ +IYNTIK+VFK   A  T++ SF   WG+V     P  +  +E++ RI ERI G+L + +      S ++ K +    +  T V TE++  ++P 
Sbjct:   21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPKNVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLVITDGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPSF--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRERISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYVPA 301          
BLAST of Vigun08g041200.1 vs. DB:Swiss
Match: SPEE_SULIM (Polyamine aminopropyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) OX=427317 GN=speE PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.179e-57
Identity = 117/284 (41.20%), Postives = 172/284 (60.56%), Query Frame = 1
Query:  250 LNSVLHKAISEYQDITLLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPK-TVFIMGGGEGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIA-NREAFSNKKLDLVINDAKVELVKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDEPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQNETHVYTEENARFIPG 1095
            +  V  +  + YQ +TL++  RFGK L++DGK+QS   DE IYHE L+HP LL  P P   V I+GGGEG+  RE L+++S+++ VM DID++V++F KKYL   ++ AF +K+  LVI D    + + K+K+D I+ DL DP++D   Y LYTK FYEK L+  LN  G  VTQA         EV+ +IYNTIK+VFK   A  T++ SF   WG+V     P  +  +E++ RI ERI G+L + +      S ++ K +    +  T V TE++  ++P 
Sbjct:   21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPKNVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLVITDGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPSF--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRERISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYVPA 301          
The following BLAST results are available for this feature:
BLAST of Vigun08g041200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ACL5_ARATH3.058e-17971.22Thermospermine synthase ACAULIS5 OS=Arabidopsis th... [more]
SPEE_SULTO5.318e-7344.21Polyamine aminopropyltransferase OS=Sulfurisphaera... [more]
SPEE_THET84.055e-6436.77Polyamine aminopropyltransferase OS=Thermus thermo... [more]
SPEE_THET24.055e-6436.77Polyamine aminopropyltransferase OS=Thermus thermo... [more]
SPEE_SULSO9.237e-6442.25Polyamine aminopropyltransferase OS=Sulfolobus sol... [more]
SPEE_AERPE2.031e-6337.50Polyamine aminopropyltransferase OS=Aeropyrum pern... [more]
SPEE_SULAC4.570e-6138.95Polyamine aminopropyltransferase OS=Sulfolobus aci... [more]
SPEE2_HYPBU4.129e-5839.64Polyamine aminopropyltransferase 2 OS=Hyperthermus... [more]
SPEE_SULIY2.179e-5741.20Polyamine aminopropyltransferase OS=Sulfolobus isl... [more]
SPEE_SULIM2.179e-5741.20Polyamine aminopropyltransferase OS=Sulfolobus isl... [more]
back to top
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037163Spermidine synthase, tetramerisation domain superfamilyGENE3D2.30.140.10coord: 49..120
e-value: 3.8E-16
score: 61.1
IPR035246Spermidine synthase, tetramerisation domainPFAMPF17284Spermine_synt_Ncoord: 69..120
e-value: 6.3E-14
score: 51.6
NoneNo IPR availablePFAMPF01564Spermine_synthcoord: 123..301
e-value: 2.9E-39
score: 134.4
NoneNo IPR availableGENE3D3.40.50.150coord: 121..371
e-value: 1.1E-69
score: 236.8
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 148..256
e-value: 2.67612E-6
score: 43.5727
IPR030374Polyamine biosynthesis domainPROSITEPS51006PABS_2coord: 67..304
score: 92.92
IPR001045Spermidine/spermine synthasesHAMAPMF_00198Spermidine_synthcoord: 68..349
score: 30.405
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 68..348

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g041200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041200.1; organism=Vigna unguiculata; type=mRNA; length=2061bp
TTTAAATGATGCAAAATTATTTAATCTTTTTTCTGGTGACATGTCCTTAT
TCACACAAAATCGAATTTTTCATCCACGACGACGTAGTAGTATAAATGGA
AGTGGTGATCACTATTGTCACACCCTACAACTCCATAACCACATTACACT
TTTCATTCAATTCTGAATCCACTTTTCTGTTGATTTTTTCTTCTCCGAAC
ATGGGTGAAGCTCCAGTATTCTACATTAATGGGTTCTCAAAGTTTGAACA
CGAAATCCAACAGCAGAACCATGTCAACGACCAGAACCATGATTCCTCTT
GGTACGAGGAAATCATCGATGAAGATCTGAAATGGTCTTTTAAACTCAAC
AGTGTGCTTCATAAAGCGATTAGTGAGTACCAGGATATAACACTCTTAGA
CACCAAGCGTTTTGGCAAGGCTTTGGTTCTTGATGGGAAGATGCAGAGTG
CAGAAACAGACGAGTTTATCTATCACGAATGCTTGATTCACCCTTCTCTT
TTGTGTCACCCTAATCCGAAGACAGTGTTTATAATGGGAGGAGGTGAAGG
TTCTGCAGCAAGGGAAGCCCTTAGGCACAGGTCAATGGACAGAGTGGTTA
TGTGTGATATCGACAAGGAAGTGGTAGATTTCTGCAAAAAATACTTGATT
GCAAATAGGGAAGCATTTTCTAATAAGAAGCTCGACCTTGTCATCAATGA
TGCCAAGGTTGAATTGGTGAAGAGAAAGGAGAAATTTGATATCATTGTTG
GAGATTTAGCAGATCCACTTGAAGATGGACCTTGTTACCAACTCTACACC
AAATCCTTCTATGAGAAGATACTGAAACCAAAGTTGAATGATAATGGCAT
TTTTGTGACCCAGGCTGGACCAGCAGGTATCTTCACACACAAAGAGGTTT
TCACTTCTATATATAACACAATCAAACAGGTCTTCAAATATGTCATTGCA
TACACAACTCATGTACCATCATTTGCTGACACATGGGGATGGGTCATGGC
TTCGGATGAACCACTATCAATTTGTGGTGAAGAAATGGACAGAAGAATCG
CAGAAAGAATAGATGGGGAACTTCTCTATCTAAATGGTGCTTGGTTCCAT
TCATCCACAACCATGAATAAAACGGTTCACCAATCTCTGCAGAATGAAAC
TCATGTTTACACAGAAGAAAATGCTAGATTTATTCCAGGACATGGAATGG
CTTTTCGACTCTAACGTTTCCACCCATAGATTGAGGGTATTGTTTCGACC
AATAATAGGATGCATTATTAGTTTCATTGCCATTGAAGTATTATCTCCTT
GGACTCTTTAGGTTTTATGGTTTTTTCTTCATAAAATAGGTTTTAAAAAA
TTAAGTGTTTATAAAATTATCTTTAGTCTTCATTCAAATAAATAAAGTTA
AACCTTTTTAAATTATGTTCTGAAATAGTAGTTTTCCTTTGAAACTTAGG
GATTCGAAAACTTTGTTATCAGAAAAAGTTTCACATTGTTTAAAAATTAA
AAAAACATTGCAGATTCGGGATCTCCAAGAAATAAAAGTAGATTTGTAAT
ATATAAATGAATTAAACTTTATTTATAACTCAGTAATAACGTTGAATTAG
GTTAAAAGTCCAATTTTTAAGATGTTATTAGAGTTATTTAAAACATAGAA
ATAAATTAGATTTAGTTTATATAAGTGTGTTTACATAGTCCAAACAGATA
ACCCTTTCAATTCAGTGAAACTATGAATGGAGAAGCTTTGTGGCCGAATA
CAGAAACTCTTGCATACTCTGACTCTCACCTCAAATCATTGCGTGGTACA
GTCCAGGTTTAACTTCGAAGATAATATTGAGAGGGCACGTTCAATTTTTG
TAATCCATGCATATTATGATGCATGTTTTCATTTGTAAATTGGTGTTGGA
GTATGTTGGATTTTGCTGTACAGAATACAGAGATATTGGAAGAAATGAAC
ATTAAAACAAAAAGAGGAGCAACATCAATCGCATAATTCTATCAATGTAT
TCCAATTGTCTTCAATTGCCTTAAGCTACATCCATGCTCCTCCTTCAAAG
TAATTAACAAT
back to top

protein sequence of Vigun08g041200.1_Vu_IT97K-499-35_v1.1

>Vigun08g041200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=373bp
MEVVITIVTPYNSITTLHFSFNSESTFLLIFSSPNMGEAPVFYINGFSKF
EHEIQQQNHVNDQNHDSSWYEEIIDEDLKWSFKLNSVLHKAISEYQDITL
LDTKRFGKALVLDGKMQSAETDEFIYHECLIHPSLLCHPNPKTVFIMGGG
EGSAAREALRHRSMDRVVMCDIDKEVVDFCKKYLIANREAFSNKKLDLVI
NDAKVELVKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDN
GIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWV
MASDEPLSICGEEMDRRIAERIDGELLYLNGAWFHSSTTMNKTVHQSLQN
ETHVYTEENARFIPGHGMAFRL*
back to top

mRNA from alignment at Vu08:4212840..4216882+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g041200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041200.1; organism=Vigna unguiculata; type=mRNA; length=4043bp; location=Sequence derived from: Vu08:4212840..4216882+ (Vigna unguiculata
TTTAAATGATGCAAAATTATTTAATCTTTTTTCTGGTGACATGTCCTTAT TCACACAAAATCGAATTTTTCATCCACGACGACGTAGTAGTATAAATGGA AGTGGTGATCACTATTGTCACACCCTACAACTCCATAACCACATTACACT TTTCATTCAATTCTGAATCCACTTTTCTGTTGATTTTTTCTTCTCCGAAC ATGGGTGAAGCTCCAGTATTCTACATTAATGGGTTCTCAAAGTTTGAACA CGAAATCCAACAGCAGAACCATGTCAACGACCAGAACCATGATTCCTCTT GGTACGAGGAAATCATCGATGAAGATCTGAAATGGTCTTTTAAACTCAAC AGGTTCCTCATTACTTCATCCAATTCAATGTATAACAGTTCAAACAAAAA AGCTTTCTATAAAACCTTAACCTTTTGTTCTTTTCTTTTCTTTTTGTTTC AACAGTGTGCTTCATAAAGCGATTAGTGAGTACCAGGATATAACACTCTT AGACACCAAGCGTTTTGGCAAGGTTAACAACTCTTCTTCTTCTTTTTCTT CTCATAAAGCAGAACAAAAAGAAACCAAATTTGAGATTATGAATTTGTTT TTTCTATTAGTAGTTGTTGTATTAAGAAAAAAACAATACTGAGACATCTG ATATAAGTTTATGAAACAAATTTGACGTCATATTTAATTTAATAGTTCAT AATGTTTTAACTATGTAATAAAAATGTGTTGCATACAGGCTTTGGTTCTT GATGGGAAGATGCAGAGTGCAGAAACAGACGAGTTTATCTATCACGAATG CTTGATTCACCCTTCTCTTTTGTGTCACCCTAAGTAAGAACATGTTTCAT GGTTGAATCATGTCAGAGTTGATTAACTCATCGTATATGCTGTGTCTACA ATGTTACATGGATTTTCTTAAAACTTTAAATGTTTTACACAATTGTTTGA CTTCTAGTAAAACCGTCAATGATTATACATAAATTTCTCATTCACGTGTT TATATTTTATTTTCTAATTTTCTGACATATTTTCAAACTTAACCATTTTA TTACAAAATAAATGAAAACTATTTATAATAAAATTATAAAAATTCTTTTA ATTTTATGATTACAATACATTTATTTCTAATAATATTAAATTACGTATTA TATGCAAGTTGACACACAGTTTGAAAGTAGGTATATGTGTGATATATTTT TATAATAAAACATGAATTAATTATTACTTAGCAATTAACCTTGAAGAATA ATTGTGCTTTACTTCATAAAATCTAGTTTAGAGAATAATAGACATAGATA GTAGTAGAGATGATTACGGTTCTTGGTGCACATGATTGGGCTATGAACCC TTCATTAATCTGAAGAGACAAATGTTAATGATTGTTGCAGTCCGAAGACA GTGTTTATAATGGGAGGAGGTGAAGGTTCTGCAGCAAGGGAAGCCCTTAG GCACAGGTCAATGGACAGAGTGGTTATGTGTGATATCGACAAGGTTTCTT AATTCTCTCTACCATACATTATTCATTTCTTTCTTAGCCGTTCATCAAAT TCAAAAGTTAATTATATCCATAATCATATGGACATAGAATAAGGATGTTT TTTTTAATTTATAAATATAGGCACCCAACTATAAAATATTGTTTTCTCAA CTGTTGCTGGTTTATATAAACTATTATAGTAGCAACTGAATCATTGATGA TATAATGGGTATATTTGGATAATTTTGTATATGAGAAAAATGAGAAATTT ATATAATGTTTTTTAGAAGTTAAAATCAGTTTGAGTTCATTTATAGAATT TTTCTAAATTTTTTATTTTTAGACGTGTATAAAGTAGTCTACTTATTTTA CTGCACTCGGATAGTATGGTTTATTGTAAAGAATATAAATAATATATGGA AAAATTAAAGTAAAATGTTACAACAAGAATTAAAGATACATCCTATTAAT TTTTCAACTGCTAATTCTTGCAGGAAGTGGTAGATTTCTGCAAAAAATAC TTGATTGCAAATAGGGAAGCATTTTCTAATAAGAAGCTCGACCTTGTCAT CAATGATGCCAAGTAAGTAACTTGTTTTTTATAATTCTTCTGATCACAAC TATGTGAGTTTAATGACTGCATACACTCAACTAGTAACAAATTGTTACTA ATATAAGTTTTAAGGTAACTATTATAAATATCAATAACCTTAACAACCAC ACACACACAAACTTACAAATAACAAGATGTAACACTTTTTGAAGGGTTGA ATTGGTGAAGAGAAAGGAGAAATTTGATATCATTGTTGGAGATTTAGCAG ATCCACTTGAAGATGGACCTTGTTACCAACTCTACACCAAATCCTTCTAT GAGAAGATACTGAAACCAAAGTTGAATGATAATGGCATTTTTGTGACCCA GGTAGTTATGACAAAAATTTGGATTCTCTGTTAAATTTTTCTCTATGTTG TTTTATGTTGTTTCTCTGTTGTGTCTTTATCGTTGATTTTGAAACTCTTA GTTTTCATAATCACATACTCAACAAAGTTTGACAAAAAAGTTTGCATCTT GTGTAGGCTGGACCAGCAGGTATCTTCACACACAAAGAGGTTTTCACTTC TATATATAACACAATCAAACAGGTCTTCAAATGTAAGACTATCTTTGTTA TATGGTTCAGGAATTACAGACATCATTAACAGAGTCAAAATAGCACAGGA TGTTCTGTTTAAACTGAAACTACAGAGTTTTTTTTTTTTTTTTTTCTGGT GCAGATGTCATTGCATACACAACTCATGTACCATCATTTGCTGACACATG GGGATGGGTCATGGTATGTGAAAAGAAACCCTTGTTTTTTTTGTACTTAT TGCTAAGTATTCCACAAGTAAAATTTGACAAGAATTTGTATGCTTTGGAT TTAGGCTTCGGATGAACCACTATCAATTTGTGGTGAAGAAATGGACAGAA GAATCGCAGAAAGAATAGATGGGGAACTTCTCTATCTAAATGGTGCTTGG TTCCATTCATCCACAACCATGAATAAAACGGTTCACCAATCGTGAGTATT TTGATATGTTGATACCAAAAGAGTCACTTTATTGGATTTTGACATGATCT TTTCATCATTGTTGCAGTCTGCAGAATGAAACTCATGTTTACACAGAAGA AAATGCTAGATTTATTCCAGGACATGGAATGGCTTTTCGACTCTAACGTT TCCACCCATAGATTGAGGGTATTGTTTCGACCAATAATAGGATGCATTAT TAGTTTCATTGCCATTGAAGTATTATCTCCTTGGACTCTTTAGGTTTTAT GGTTTTTTCTTCATAAAATAGGTTTTAAAAAATTAAGTGTTTATAAAATT ATCTTTAGTCTTCATTCAAATAAATAAAGTTAAACCTTTTTAAATTATGT TCTGAAATAGTAGTTTTCCTTTGAAACTTAGGGATTCGAAAACTTTGTTA TCAGAAAAAGTTTCACATTGTTTAAAAATTAAAAAAACATTGCAGATTCG GGATCTCCAAGAAATAAAAGTAGATTTGTAATATATAAATGAATTAAACT TTATTTATAACTCAGTAATAACGTTGAATTAGGTTAAAAGTCCAATTTTT AAGATGTTATTAGAGTTATTTAAAACATAGAAATAAATTAGATTTAGTTT ATATAAGTGTGTTTACATAGTCCAAACAGATAACCCTTTCAATTCAGTGA AACTATGAATGGAGAAGCTTTGTGGCCGAATACAGAAACTCTTGCATACT CTGACTCTCACCTCAAATCATTGCGTGGTACAGTCCAGGTTTAACTTCGA AGATAATATTGAGAGGGCACGTTCAATTTTTGTAATCCATGCATATTATG ATGCATGTTTTCATTTGTAAATTGGTGTTGGAGTATGTTGGATTTTGCTG TACAGAATACAGAGATATTGGAAGAAATGAACATTAAAACAAAAAGAGGA GCAACATCAATCGCATAATTCTATCAATGTATTCCAATTGTCTTCAATTG CCTTAAGCTACATCCATGCTCCTCCTTCAAAGTAATTAACAAT
back to top

Coding sequence (CDS) from alignment at Vu08:4212840..4216882+

>Vigun08g041200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041200.1; organism=Vigna unguiculata; type=CDS; length=1119bp; location=Sequence derived from: Vu08:4212840..4216882+ (Vigna unguiculata
ATGGAAGTGGTGATCACTATTGTCACACCCTACAACTCCATAACCACATT
ACACTTTTCATTCAATTCTGAATCCACTTTTCTGTTGATTTTTTCTTCTC
CGAACATGGGTGAAGCTCCAGTATTCTACATTAATGGGTTCTCAAAGTTT
GAACACGAAATCCAACAGCAGAACCATGTCAACGACCAGAACCATGATTC
CTCTTGGTACGAGGAAATCATCGATGAAGATCTGAAATGGTCTTTTAAAC
TCAACAGTGTGCTTCATAAAGCGATTAGTGAGTACCAGGATATAACACTC
TTAGACACCAAGCGTTTTGGCAAGGCTTTGGTTCTTGATGGGAAGATGCA
GAGTGCAGAAACAGACGAGTTTATCTATCACGAATGCTTGATTCACCCTT
CTCTTTTGTGTCACCCTAATCCGAAGACAGTGTTTATAATGGGAGGAGGT
GAAGGTTCTGCAGCAAGGGAAGCCCTTAGGCACAGGTCAATGGACAGAGT
GGTTATGTGTGATATCGACAAGGAAGTGGTAGATTTCTGCAAAAAATACT
TGATTGCAAATAGGGAAGCATTTTCTAATAAGAAGCTCGACCTTGTCATC
AATGATGCCAAGGTTGAATTGGTGAAGAGAAAGGAGAAATTTGATATCAT
TGTTGGAGATTTAGCAGATCCACTTGAAGATGGACCTTGTTACCAACTCT
ACACCAAATCCTTCTATGAGAAGATACTGAAACCAAAGTTGAATGATAAT
GGCATTTTTGTGACCCAGGCTGGACCAGCAGGTATCTTCACACACAAAGA
GGTTTTCACTTCTATATATAACACAATCAAACAGGTCTTCAAATATGTCA
TTGCATACACAACTCATGTACCATCATTTGCTGACACATGGGGATGGGTC
ATGGCTTCGGATGAACCACTATCAATTTGTGGTGAAGAAATGGACAGAAG
AATCGCAGAAAGAATAGATGGGGAACTTCTCTATCTAAATGGTGCTTGGT
TCCATTCATCCACAACCATGAATAAAACGGTTCACCAATCTCTGCAGAAT
GAAACTCATGTTTACACAGAAGAAAATGCTAGATTTATTCCAGGACATGG
AATGGCTTTTCGACTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR037163Spermidine_synt_N_sf
IPR035246Spermidine_synt_N
IPR030374PABS
IPR001045Spermi_synthase
IPR029063SAM-dependent_MTases_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity