Vigun08g041600.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL5_ARATH (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 1.786e-107 Identity = 185/255 (72.55%), Postives = 221/255 (86.67%), Query Frame = 1 Query: 7 AGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXX-XXXXXXXXXXXXXXXXXXXESKNTKAMQSK-----DEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 753 A Y+PRTVEEVFRDFKGRRA +I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E WEVNLPAEEVPPELPEPALGINFARDGMQ+++WLSLVAVHSDAWLL+V+FYFG+RFGFD+ADRKRLF+MIN++PT++EVVTG A+KQ KE SS + + + ++ RG ESK++K + +K E +EG E EDE+EH ET CGACG++Y SDEFWICCD+CEKWFHG+CVKITPARAEHIK YKCP+CSNKRARP Sbjct: 6 AHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWEVNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRADRKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAKDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPARAEHIKHYKCPTCSNKRARP 260
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL3_ARATH (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 5.259e-107 Identity = 179/248 (72.18%), Postives = 213/248 (85.89%), Query Frame = 1 Query: 7 AGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750 A YNPRTVEEVF+DFKGRR A++KALTTDV+EFYQQCDPEKENLCLYG P+E+WEVNLPAEEVPPELPEPALGINFARDG+ +K+WLSLVA+HSDAWLL+V+FYFG+RF F K +RKRLFNMIND+PTIFEVVTGMAK + + S+ + + + ++ R SE K++K Q K+ED ++ +DE++H ET CGACG+S +DEFWICCD+CEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR Sbjct: 6 ALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWEVNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMINDVPTIFEVVTGMAKAK-DKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEED---EEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 249
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL7_ORYSI (PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07694 PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 2.434e-103 Identity = 168/246 (68.29%), Postives = 199/246 (80.89%), Query Frame = 1 Query: 13 YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750 +N R+ E+VFRDF+ RRA ++KALTTDVE+FY+QCDPEKENLCLYG P+E W+V LPAEEVPPELPEPALGINFARDGM +KDWLSLVAVHSDAWLL+VAFYFGARFGFDK R+RLF MIN LPT++EVVTG+AKKQ K + S + + K + + S SK K Q KDE+D G E+E + CGACGE+Y + EFWICCD+CEKWFHGKCV+ITPA+AEHIKQYKCP CS+KR+R Sbjct: 24 HNARSAEDVFRDFRARRAGIVKALTTDVEKFYRQCDPEKENLCLYGLPNETWDVTLPAEEVPPELPEPALGINFARDGMIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMINGLPTVYEVVTGIAKKQTKVSNGSSKSNKSNPKPSKQSNSNSKPAKPPQPKDEEDSG---PEGAEDEDQAYMCGACGETYANGEFWICCDVCEKWFHGKCVRITPAKAEHIKQYKCPGCSSKRSR 266
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL7_ORYSJ (PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0564100 PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 2.543e-103 Identity = 168/246 (68.29%), Postives = 199/246 (80.89%), Query Frame = 1 Query: 13 YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750 +N R+ E+VFRDF+ RRA ++KALTTDVE+FY+QCDPEKENLCLYG P+E W+V LPAEEVPPELPEPALGINFARDGM +KDWLSLVAVHSDAWLL+VAFYFGARFGFDK R+RLF MIN LPT++EVVTG+AKKQ K + S + + K + + S SK K Q KDE+D G E+E + CGACGE+Y + EFWICCD+CEKWFHGKCV+ITPA+AEHIKQYKCP CS+KR+R Sbjct: 24 HNARSAEDVFRDFRARRAGIVKALTTDVEKFYRQCDPEKENLCLYGLPNETWDVTLPAEEVPPELPEPALGINFARDGMIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMINGLPTVYEVVTGIAKKQTKVSNGSSKSNKSNPKPSKQSNSNSKPAKPPQPKDEEDSG---PEGTEDEDQAYMCGACGETYANGEFWICCDVCEKWFHGKCVRITPAKAEHIKQYKCPGCSSKRSR 266
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL9_ORYSI (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26819 PE=3 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.110e-102 Identity = 185/276 (67.03%), Postives = 204/276 (73.91%), Query Frame = 1 Query: 1 MDAGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEG-------------VTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSC------------SNKRARP 753 MDA YNPRTVEEVFRDFKGRRA L++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPAEEVPPELPEPALGINFARDGMQ+KDWLS+VAVHSDAWLL+VAFYFGARFGFDK DRKRLF MINDLPTIFEVV+G +K + ++ SN S S +K K +EG EEEH ET CGACGESY +DEFWICCDICEKWFHGKCVKITPA+AEHIKQYKCPSC + KRARP Sbjct: 1 MDAQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSGKSKAKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKNEGREEEGGPDDEEGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSGGNGGGGGGSGNGKRARP 276
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL9_ORYSJ (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0608400 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.629e-102 Identity = 185/277 (66.79%), Postives = 204/277 (73.65%), Query Frame = 1 Query: 1 MDAGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEG--------------VTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSC------------SNKRARP 753 MDA YNPRTVEEVFRDFKGRRA L++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPAEEVPPELPEPALGINFARDGMQ+KDWLS+VAVHSDAWLL+VAFYFGARFGFDK DRKRLF MINDLPTIFEVV+G +K + ++ SN S S +K K +EG EEEH ET CGACGESY +DEFWICCDICEKWFHGKCVKITPA+AEHIKQYKCPSC + KRARP Sbjct: 1 MDAQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSGKSKAKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKNEGREEEGGPDDEEGGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSGGNGGGGGVSGNGKRARP 277
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFIN_MEDSA (PHD finger protein Alfin1 OS=Medicago sativa OX=3879 GN=ALFIN-1 PE=1 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 6.100e-100 Identity = 170/246 (69.11%), Postives = 200/246 (81.30%), Query Frame = 1 Query: 19 PRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKA--MQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750 PRTVEEVF D+KGRRA LIKALTTDVE+FYQ DPEKENLCLYGFP+E WEVNLP EEVPPELPEPALGINFARDGMQ+KDWLSLVAVHSD+WLLAVAFYFGARFGF K DRKRLF MINDLPT+FE+ TG AK+ + ++ +N S++K KS+ K TK M + +++ E E++++ + CGACG++Y +DEFWICCD+CEKWFHGKCVKITPA+AEHIKQYKCP CS K+ R Sbjct: 10 PRTVEEVFSDYKGRRAGLIKALTTDVEKFYQLVDPEKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNDRKRLFQMINDLPTVFELATGTAKQSKDQLTAHNNGSNSKYKSSGKSRQSESQTKGVKMSAPVKEEVDSGEEEEEDDDEQGATCGACGDNYGTDEFWICCDMCEKWFHGKCVKITPAKAEHIKQYKCPGCSIKKPR 255
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL6_ORYSJ (PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0887700 PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 1.530e-99 Identity = 174/249 (69.88%), Postives = 203/249 (81.53%), Query Frame = 1 Query: 7 AGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKN-TKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750 A Y RT EEVFRD +GRRA +IKALTTDVE+FY+ CDPEKENLCLYG+P+E WEV LPAEEVPPE+PEPALGINFARDGM +KDWL+LVAVHSD+WLL+VAFYFGARFGFD+ R+RLFNMIN+LPTIFEVVTG AKKQ KEK+ S+ S K S + +ES++ +K KDE+ G E+E++H+ T CG CG + DEFWICCD CEKW+HGKCVKITPARAEHIKQYKCP C+NKRAR Sbjct: 23 APYATRTAEEVFRDLRGRRAGMIKALTTDVEKFYKLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKKQAKEKTPNSSSKSNKPSSKVQSKAESRSKSKLSAPKDEEGSGDDEGEEEEDDHDNTLCGTCGTNDGKDEFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDCTNKRAR 271
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL5_ORYSJ (PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0419100 PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 3.359e-99 Identity = 176/257 (68.48%), Postives = 199/257 (77.43%), Query Frame = 1 Query: 1 MDAG----YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKN---TKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750 MD G Y RT EEVFRDF+GRRA +IKALTTDVE+FYQ CDPEKENLCLYG+P+E WEV LPAEEVPPE+PEPALGINFARDGM +KDWL+LVAVHSD+WLLAVAFYF ARFGFDK R+RLFNMIN+LPTIFEVVTG AKKQ KEK+ S + K S + ES + KD+D+ G E+EEE + T CG+CG + DEFWICCD CE+W+HGKCVKITPARAEHIK YKCP C NKRAR Sbjct: 1 MDGGSGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSKAPKPPAPPKDDDESGDEYADEEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDCGNKRAR 257
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL5_ORYSI (PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19996 PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 3.359e-99 Identity = 176/257 (68.48%), Postives = 199/257 (77.43%), Query Frame = 1 Query: 1 MDAG----YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKN---TKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750 MD G Y RT EEVFRDF+GRRA +IKALTTDVE+FYQ CDPEKENLCLYG+P+E WEV LPAEEVPPE+PEPALGINFARDGM +KDWL+LVAVHSD+WLLAVAFYF ARFGFDK R+RLFNMIN+LPTIFEVVTG AKKQ KEK+ S + K S + ES + KD+D+ G E+EEE + T CG+CG + DEFWICCD CE+W+HGKCVKITPARAEHIK YKCP C NKRAR Sbjct: 1 MDGGSGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSKAPKPPAPPKDDDESGDEYADEEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDCGNKRAR 257 The following BLAST results are available for this feature:
BLAST of Vigun08g041600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g041600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041600.1; organism=Vigna unguiculata; type=mRNA; length=1499bpback to top protein sequence of Vigun08g041600.1_Vu_IT97K-499-35_v1.1 >Vigun08g041600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=252bpback to top mRNA from alignment at Vu08:4269226..4273477+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g041600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041600.1; organism=Vigna unguiculata; type=mRNA; length=4252bp; location=Sequence derived from: Vu08:4269226..4273477+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:4269226..4273477+ >Vigun08g041600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041600.1; organism=Vigna unguiculata; type=CDS; length=756bp; location=Sequence derived from: Vu08:4269226..4273477+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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