Vigun08g041600.1

Transcript Overview
NameVigun08g041600.1
Unique NameVigun08g041600.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1499
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:4269226..4273477 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR372Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL097Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL640Pisum sativum Cameor genome v1aPisum sativum
pvvuL061Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL785Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL337Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0583Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL417Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL1122Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0118Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0320Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0360Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0749Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0750Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL529Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL704Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR588Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR608Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL309Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL288Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL450Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL421Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL383Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL390Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL560Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR410Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL386Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL470Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL599Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL324Cicer arietinum
carvuL404Cicer arietinum
ccavuL327Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL433Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR669Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR677Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR679Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR680Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR715Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL238Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL253Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL691Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR463Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g210960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.03G249600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va04G065720.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr08.332Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_30669Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va07G065060.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr09.1506Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan07g252700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat6g022280.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_014644748.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
PvulFLAVERTChr01.250Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vum_02G00536.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_07092.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.02G063600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Phvul.009G080400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.001G039500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr09.1000522Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Tiffany.R1.3g173720.1Vicia faba cv. Tiffany genome v1.0Vicia faba
XM_058872687.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan04g232800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_09137Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-KK1_035471Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_11410.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014649733.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat06G0062300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.03G156100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg35579.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_03G01738.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_12457Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.02G050600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g222200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun09g222300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun08g041600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g041600Vigun08g041600_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g041600.1Vigun08g041600.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g041600.1_Vu_IT97K-499-35_v1.1Vigun08g041600.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g041600.1.v1.1.five_prime_UTR.1Vigun08g041600.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g041600.1.v1.1.CDS.1Vigun08g041600.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041600.1.v1.1.CDS.2Vigun08g041600.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041600.1.v1.1.CDS.3Vigun08g041600.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041600.1.v1.1.CDS.4Vigun08g041600.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g041600.1.v1.1.CDS.5Vigun08g041600.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g041600.1.v1.1.three_prime_UTR.1Vigun08g041600.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL5_ARATH (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 1.786e-107
Identity = 185/255 (72.55%), Postives = 221/255 (86.67%), Query Frame = 1
Query:    7 AGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXX-XXXXXXXXXXXXXXXXXXXESKNTKAMQSK-----DEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP 753
            A Y+PRTVEEVFRDFKGRRA +I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E WEVNLPAEEVPPELPEPALGINFARDGMQ+++WLSLVAVHSDAWLL+V+FYFG+RFGFD+ADRKRLF+MIN++PT++EVVTG A+KQ KE  SS + + +    ++  RG ESK++K + +K      E +EG   E EDE+EH ET CGACG++Y SDEFWICCD+CEKWFHG+CVKITPARAEHIK YKCP+CSNKRARP
Sbjct:    6 AHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWEVNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRADRKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAKDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPARAEHIKHYKCPTCSNKRARP 260          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL3_ARATH (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 5.259e-107
Identity = 179/248 (72.18%), Postives = 213/248 (85.89%), Query Frame = 1
Query:    7 AGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750
            A YNPRTVEEVF+DFKGRR A++KALTTDV+EFYQQCDPEKENLCLYG P+E+WEVNLPAEEVPPELPEPALGINFARDG+ +K+WLSLVA+HSDAWLL+V+FYFG+RF F K +RKRLFNMIND+PTIFEVVTGMAK +  + S+ + + +    ++  R SE K++K  Q K+ED     ++ +DE++H ET CGACG+S  +DEFWICCD+CEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR
Sbjct:    6 ALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWEVNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMINDVPTIFEVVTGMAKAK-DKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEED---EEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 249          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL7_ORYSI (PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07694 PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 2.434e-103
Identity = 168/246 (68.29%), Postives = 199/246 (80.89%), Query Frame = 1
Query:   13 YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750
            +N R+ E+VFRDF+ RRA ++KALTTDVE+FY+QCDPEKENLCLYG P+E W+V LPAEEVPPELPEPALGINFARDGM +KDWLSLVAVHSDAWLL+VAFYFGARFGFDK  R+RLF MIN LPT++EVVTG+AKKQ K  +  S  + +  K + +  S SK  K  Q KDE+D G       E+E +   CGACGE+Y + EFWICCD+CEKWFHGKCV+ITPA+AEHIKQYKCP CS+KR+R
Sbjct:   24 HNARSAEDVFRDFRARRAGIVKALTTDVEKFYRQCDPEKENLCLYGLPNETWDVTLPAEEVPPELPEPALGINFARDGMIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMINGLPTVYEVVTGIAKKQTKVSNGSSKSNKSNPKPSKQSNSNSKPAKPPQPKDEEDSG---PEGAEDEDQAYMCGACGETYANGEFWICCDVCEKWFHGKCVRITPAKAEHIKQYKCPGCSSKRSR 266          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL7_ORYSJ (PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0564100 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 2.543e-103
Identity = 168/246 (68.29%), Postives = 199/246 (80.89%), Query Frame = 1
Query:   13 YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750
            +N R+ E+VFRDF+ RRA ++KALTTDVE+FY+QCDPEKENLCLYG P+E W+V LPAEEVPPELPEPALGINFARDGM +KDWLSLVAVHSDAWLL+VAFYFGARFGFDK  R+RLF MIN LPT++EVVTG+AKKQ K  +  S  + +  K + +  S SK  K  Q KDE+D G       E+E +   CGACGE+Y + EFWICCD+CEKWFHGKCV+ITPA+AEHIKQYKCP CS+KR+R
Sbjct:   24 HNARSAEDVFRDFRARRAGIVKALTTDVEKFYRQCDPEKENLCLYGLPNETWDVTLPAEEVPPELPEPALGINFARDGMIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMINGLPTVYEVVTGIAKKQTKVSNGSSKSNKSNPKPSKQSNSNSKPAKPPQPKDEEDSG---PEGTEDEDQAYMCGACGETYANGEFWICCDVCEKWFHGKCVRITPAKAEHIKQYKCPGCSSKRSR 266          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL9_ORYSI (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26819 PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.110e-102
Identity = 185/276 (67.03%), Postives = 204/276 (73.91%), Query Frame = 1
Query:    1 MDAGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEG-------------VTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSC------------SNKRARP 753
            MDA YNPRTVEEVFRDFKGRRA L++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPAEEVPPELPEPALGINFARDGMQ+KDWLS+VAVHSDAWLL+VAFYFGARFGFDK DRKRLF MINDLPTIFEVV+G +K +    ++ SN  S  S         +K  K        +EG                    EEEH ET CGACGESY +DEFWICCDICEKWFHGKCVKITPA+AEHIKQYKCPSC            + KRARP
Sbjct:    1 MDAQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSGKSKAKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKNEGREEEGGPDDEEGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSGGNGGGGGGSGNGKRARP 276          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL9_ORYSJ (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0608400 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.629e-102
Identity = 185/277 (66.79%), Postives = 204/277 (73.65%), Query Frame = 1
Query:    1 MDAGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKAMQSKDEDDEG--------------VTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSC------------SNKRARP 753
            MDA YNPRTVEEVFRDFKGRRA L++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPAEEVPPELPEPALGINFARDGMQ+KDWLS+VAVHSDAWLL+VAFYFGARFGFDK DRKRLF MINDLPTIFEVV+G +K +    ++ SN  S  S         +K  K        +EG                     EEEH ET CGACGESY +DEFWICCDICEKWFHGKCVKITPA+AEHIKQYKCPSC            + KRARP
Sbjct:    1 MDAQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSGKSKAKPPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVKNEGREEEGGPDDEEGGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSGGNGGGGGVSGNGKRARP 277          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFIN_MEDSA (PHD finger protein Alfin1 OS=Medicago sativa OX=3879 GN=ALFIN-1 PE=1 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 6.100e-100
Identity = 170/246 (69.11%), Postives = 200/246 (81.30%), Query Frame = 1
Query:   19 PRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKNTKA--MQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750
            PRTVEEVF D+KGRRA LIKALTTDVE+FYQ  DPEKENLCLYGFP+E WEVNLP EEVPPELPEPALGINFARDGMQ+KDWLSLVAVHSD+WLLAVAFYFGARFGF K DRKRLF MINDLPT+FE+ TG AK+   + ++ +N S++K KS+ K       TK   M +  +++     E E++++ +   CGACG++Y +DEFWICCD+CEKWFHGKCVKITPA+AEHIKQYKCP CS K+ R
Sbjct:   10 PRTVEEVFSDYKGRRAGLIKALTTDVEKFYQLVDPEKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNDRKRLFQMINDLPTVFELATGTAKQSKDQLTAHNNGSNSKYKSSGKSRQSESQTKGVKMSAPVKEEVDSGEEEEEDDDEQGATCGACGDNYGTDEFWICCDMCEKWFHGKCVKITPAKAEHIKQYKCPGCSIKKPR 255          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL6_ORYSJ (PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0887700 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 1.530e-99
Identity = 174/249 (69.88%), Postives = 203/249 (81.53%), Query Frame = 1
Query:    7 AGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKN-TKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750
            A Y  RT EEVFRD +GRRA +IKALTTDVE+FY+ CDPEKENLCLYG+P+E WEV LPAEEVPPE+PEPALGINFARDGM +KDWL+LVAVHSD+WLL+VAFYFGARFGFD+  R+RLFNMIN+LPTIFEVVTG AKKQ KEK+  S+  S K  S  +  +ES++ +K    KDE+  G     E+E++H+ T CG CG +   DEFWICCD CEKW+HGKCVKITPARAEHIKQYKCP C+NKRAR
Sbjct:   23 APYATRTAEEVFRDLRGRRAGMIKALTTDVEKFYKLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKKQAKEKTPNSSSKSNKPSSKVQSKAESRSKSKLSAPKDEEGSGDDEGEEEEDDHDNTLCGTCGTNDGKDEFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDCTNKRAR 271          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL5_ORYSJ (PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0419100 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 3.359e-99
Identity = 176/257 (68.48%), Postives = 199/257 (77.43%), Query Frame = 1
Query:    1 MDAG----YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKN---TKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750
            MD G    Y  RT EEVFRDF+GRRA +IKALTTDVE+FYQ CDPEKENLCLYG+P+E WEV LPAEEVPPE+PEPALGINFARDGM +KDWL+LVAVHSD+WLLAVAFYF ARFGFDK  R+RLFNMIN+LPTIFEVVTG AKKQ KEK+  S +   K  S  +   ES +         KD+D+ G     E+EEE + T CG+CG +   DEFWICCD CE+W+HGKCVKITPARAEHIK YKCP C NKRAR
Sbjct:    1 MDGGSGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSKAPKPPAPPKDDDESGDEYADEEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDCGNKRAR 257          
BLAST of Vigun08g041600.1 vs. DB:Swiss
Match: ALFL5_ORYSI (PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19996 PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 3.359e-99
Identity = 176/257 (68.48%), Postives = 199/257 (77.43%), Query Frame = 1
Query:    1 MDAG----YNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWXXXXXXXXXXXXXXXXXXGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGXXXXXXXXXXXXXXXXXXXXXXESKN---TKAMQSKDEDDEGVTLXXXXXXXXXXTFCGACGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 750
            MD G    Y  RT EEVFRDF+GRRA +IKALTTDVE+FYQ CDPEKENLCLYG+P+E WEV LPAEEVPPE+PEPALGINFARDGM +KDWL+LVAVHSD+WLLAVAFYF ARFGFDK  R+RLFNMIN+LPTIFEVVTG AKKQ KEK+  S +   K  S  +   ES +         KD+D+ G     E+EEE + T CG+CG +   DEFWICCD CE+W+HGKCVKITPARAEHIK YKCP C NKRAR
Sbjct:    1 MDGGSGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSKAPKPPAPPKDDDESGDEYADEEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDCGNKRAR 257          
The following BLAST results are available for this feature:
BLAST of Vigun08g041600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ALFL5_ARATH1.786e-10772.55PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis tha... [more]
ALFL3_ARATH5.259e-10772.18PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis tha... [more]
ALFL7_ORYSI2.434e-10368.29PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa su... [more]
ALFL7_ORYSJ2.543e-10368.29PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa su... [more]
ALFL9_ORYSI1.110e-10267.03PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa su... [more]
ALFL9_ORYSJ1.629e-10266.79PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa su... [more]
ALFIN_MEDSA6.100e-10069.11PHD finger protein Alfin1 OS=Medicago sativa OX=38... [more]
ALFL6_ORYSJ1.530e-9969.88PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa su... [more]
ALFL5_ORYSJ3.359e-9968.48PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa su... [more]
ALFL5_ORYSI3.359e-9968.48PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa su... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 197..245
e-value: 1.6E-9
score: 47.6
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 197..246
e-value: 1.8E-10
score: 40.5
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 195..247
score: 9.712
IPR021998AlfinPFAMPF12165Alfincoord: 9..136
e-value: 7.3E-68
score: 226.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 190..250
e-value: 4.6E-24
score: 85.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..191
NoneNo IPR availableCDDcd15613PHD_AL_plantcoord: 197..247
e-value: 7.57452E-32
score: 109.507
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 198..244
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 188..248

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g041600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041600.1; organism=Vigna unguiculata; type=mRNA; length=1499bp
TTTTTTCTTTTAAACGTAAAAAGTGCAAGAAAAAAATAAAAACGTATCCG
GTTCAAGTGTGAAACGGATTCGATGGGCTTTTATCAAATCCGGTTAATTC
AATCCAATTGTTTCCGATTCAAATCCGGGTTATAAAAAGCCTGTGTTTTC
TCTGTTTCACTATTACTACACTACTCCTATTTTCATGTGTGTTGTGTTGT
GTTTTGTTTCACACACTACACACAGAAACATAAACATAGAGAGTGAGAAA
AGGGTCAAATAGTTTACTTGTTTTTCTTTCCCTCCATTCTTTTCAACTCT
GCAACACTGCCTTCGGACATGGACGCAGGATACAATCCTCGTACGGTCGA
AGAGGTCTTTAGGGATTTCAAAGGTCGCAGAGCTGCTCTGATTAAAGCTC
TCACCACTGATGTTGAAGAGTTCTACCAGCAGTGTGATCCCGAGAAGGAA
AATCTTTGCCTTTATGGATTTCCAAGTGAGCAGTGGGAAGTCAATTTGCC
AGCTGAGGAGGTGCCTCCAGAGCTTCCAGAGCCAGCATTAGGCATTAACT
TTGCCAGAGATGGGATGCAAGATAAGGACTGGCTGTCTTTGGTTGCTGTA
CACAGTGATGCTTGGTTACTTGCTGTGGCTTTTTATTTTGGTGCTAGGTT
TGGGTTTGACAAGGCTGATAGGAAGCGACTATTTAACATGATTAATGATC
TTCCAACTATATTTGAGGTTGTTACTGGGATGGCCAAGAAACAAGGAAAG
GAAAAGTCATCAGTTTCAAATCATAGCAGTACCAAATCAAAATCAAACTC
TAAGCGAGGTTCTGAATCAAAGAACACAAAAGCAATGCAATCAAaagacg
aggatgatgagggtgtgactttggaagctgaagatgaagaggagcatgaa
gaGACTTTCTGTGGGGCATGTGGAGAGAGCTATACTTCTGATGAGTTCTG
GATTTGCTGTGACATTTGTGAGAAATGGTTCCATGGAAAGTGTGTGAAGA
TTACACCTGCAAGAGCTGAACACATCAAGCAGTACAAATGTCCATCCTGC
AGCAACAAGAGAGCTAGACCTTGACCATGTGGCTAGCATGGTTGTGACTA
TAATCTTGGCAATTTTATGACTACTAATTTGTTTAGTAGGTCAAGTTTAT
TAGTCTTGCTGTGAATTTCAGGTATATTATTCCAGATAAAAACATTAGGT
TTATGAGCTGCTGTTGATTTACCTACCATTAGGATAGTTATTTCATAAGC
AGACTTTATGTTTTTGTTAAGTACTTTCTTAAATTTAATGTAGTTGTAAC
TGTGTTGTGTCCATAGCTTGCTCAAGTTCATACTCACATCCCTTGTCATA
GGAATCTCTTTTCAATTTTTTCACTTAACCTTTTTCGAATTCAAGTTCAT
TTTCTAAACGTTGGTGAAAATATTGAATGTGTAACCTCCCAGCTTTGTTA
AATAGAGCATGCTCAAATTTGGAACATTTGAAGCAAGTTTTTATAAAAT
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protein sequence of Vigun08g041600.1_Vu_IT97K-499-35_v1.1

>Vigun08g041600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=252bp
MDAGYNPRTVEEVFRDFKGRRAALIKALTTDVEEFYQQCDPEKENLCLYG
FPSEQWEVNLPAEEVPPELPEPALGINFARDGMQDKDWLSLVAVHSDAWL
LAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGMAKKQGKEKSSVS
NHSSTKSKSNSKRGSESKNTKAMQSKDEDDEGVTLEAEDEEEHEETFCGA
CGESYTSDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR
P*
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mRNA from alignment at Vu08:4269226..4273477+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g041600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041600.1; organism=Vigna unguiculata; type=mRNA; length=4252bp; location=Sequence derived from: Vu08:4269226..4273477+ (Vigna unguiculata
TTTTTTCTTTTAAACGTAAAAAGTGCAAGAAAAAAATAAAAACGTATCCG GTTCAAGTGTGAAACGGATTCGATGGGCTTTTATCAAATCCGGTTAATTC AATCCAATTGTTTCCGATTCAAATCCGGGTTATAAAAAGCCTGTGTTTTC TCTGTTTCACTATTACTACACTACTCCTATTTTCATGTGTGTTGTGTTGT GTTTTGTTTCACACACTACACACAGAAACATAAACATAGAGAGTGAGAAA AGGGTCAAATAGTTTACTTGTTTTTCTTTCCCTCCATTCTTTTCAACTCT GCAACACTGCCTTCGGACATGGACGCAGGATACAATCCTCGTACGGTCGA AGAGGTCTTTAGGGATTTCAAAGGTCGCAGAGCTGCTCTGATTAAAGCTC TCACCACTGGTTCTTACTTCTTATCCTTTTCCATTCCAATCCTTTCTTTT TCTTTGCGTTTAAAGAATAAAAAATTGAAAAGAATTGACCTTTTTCACCT TCCTAATGTTTTTCTTTTCCACTTCTATGTGGGTATTCCAGATGTTGAAG AGTTCTACCAGCAGTGTGATCCCGGTAACGTTTTGTTCCGTACAAAACTG TTTTTTTGTTGTTTTTATTTTGGTCGGTTTTTATGATGTATCTTTTCCAG TCTGGTCCATTGAATTGGGTTGATTTCTGAAGTGGAAAGTGAAGATTATT TTGAGTTTGGGTTTTGTTGGTTTCAATTTGGAGAGAAATTTGAATTTAGG TGGGTGCGAAACTATGTTTGGATTAGATTTTGGGAAGTACTTTTGAGAAT TGGAACGCACAATAACGAATTCCAGTGCAGCACACGACTGAGGGGAAAAA TGTTGCTTTCGGAGTAAAAGTATTTTTGGGTTGTCCCAGCTTCAATCCCA ACATGCACTGGGGATGGGATTTTCGAACTTTAATTTTGAAAATATGGGAA AGCGTGTATACCTAATTTTCTTACTCTGACAATTTTGTAATGGCTATTCG TTGAAGTTTACATTTTTCTTATCTAATAAACACTGTGCTCGTGCAATGGG GTCATTAGAGGATTTCTATTTCTATTTCTTTGTAGTTGTTATGTAGCTAT AATGTAGCATGGACTGAAGTTGCCTTATGCTACCATAAATGGAAGAAACT CAATTGAAAAATATTCAGTTGGTAGCTTTCAAATTTAGCGTGCATCATTA TGTTTCATTGTACTTGGGCCCATAATTTGTTTGCCTGACAGGGCTATGCT TGCACCTGTTAAAATATGGTGAAATGGTTTCATTTTGCCACCCTTCCTTT CATATGAAGTATATTTGGTGGGACTCAGAATGAAGCTAAATTTTATTTGC ATTTTATATTCTTTCAGGACCATTTGTTCTAATCCTTACCCTTTTGGGAT GTATGAATATGACATGACTCTAAATGAGTGCCTGTGTGCTTGTTATTACT TGATATATTTTTTGTTTAATGTTAATGTACTTCAGACTCACCTTTCGTAA ACTATGATTTTGGGTTAAAGGGGTGTGCTAATAGCCATTAGGTTGGTCTT TAATGGACTGCAGCCAACGCATGATATGTAGATCTCTTGGGTATATTTGG GAGTTGGAAGGGGAAGTAATTGTAAAAAAAATGATGAGGAAGTGTACGAG CCTTTTTTGGATGTTTAATTCAAAATAATGAAAGATTCTAGGATTGTGGG TTATGAGACTGTCTTATCCCCTCCATAAGGAAAAACCTCAAATGCCAGGA ATCTTTTAAATTTCATTTTTCTGCCTATCCAATGTAATTAATGCCGTGAA TGAATATTTTCTTTTGGGGTATTTGATCTAATGTGTGATTGATATAAGCT GTTTCAACAGGCTACCATAATGCCATAACTCAGTTGCTGATTATAGTGTT GTTCTTATTGCATTTAACAGTTCTTAGTATTTGTTGAAAATGAGACTTTA AATGTGAACTTATATGAGCTCTGTGGTACAGAGAAGGAAAATCTTTGCCT TTATGGATTTCCAAGTGAGCAGTGGGAAGTCAATTTGCCAGCTGAGGAGG TGCCTCCAGAGCTTCCAGAGCCAGCATTAGGCATTAACTTTGCCAGAGAT GGGATGCAAGATAAGGACTGGCTGTCTTTGGTTGCTGTACACAGTGATGC TTGGTTACTTGCTGTGGCTTTTTATTTTGGTGCTAGGTTTGGGTTTGACA AGGCTGATAGGTACGTACTTTCCTTTCTCTTCTACATATATGGGTTTAGA TTATTATTTTTTTAGGATCATTGGATGTTGTTTTCACATTATTCTAAATT TTAAACTCAAGGATACTTGAACCTATTCTTTGAATATGATTCTTTTGCTG TTTTGCTTGCATGTAAATTAACAAGAGTATTGGAGTAAAGAAAGAATTGA TTAGACACAAAAGTGTAATAGGGAGTATCAGATTTTCTAGTGCGTAATGT CCTCAATTTCCTCTTGTAATGTTGTCTACCTGGACAGTCACTATTAGTTA TCCGTATGGTGTTATTTGGTTCGGTTGAGGAAAAGATAACTGAGTTGAAA TAAAGTAGGGACGTGTTGAATTGTTAATGGGAATTTTTGGTTGGTGTCTT CATTACTCTACTTTGGAGTCCATGTTATGCTCAAGTTATTTTTGGTCGTT AATTTTGAAACTCTGAAATTTTTGAAAGATGTTTCTTACCTTTTAATAGT TCCTTGATGGTTTTTCACTATCTGATTCTAACAAAATCAGATGGAAGGAT ACTGGAGAGGGTATGAATAATATCATACACCCTCACCACCATGTGTTTCC ATAAGATACTTGGGAAGTTCAATTTTTTCTGTTACTTGTGCACATAATTA CTAGATTGCAACGTATGAATATGATAGTGTAACAGGACTAGTTATGAGGG GTAGAACATGAGAGTGTTTTTTTAGTCCCCATTCAGTCTGTTGAACTGTT TTCTGTTTCTGAATAATTTTTTTCATTTTAGAAGAAAACCCTTTTCCCAT GACCTAGGTACCCATCTAATGCTGTACGGCTCAAATTTTAAGAAGTATTA ACTAGAGAATCTTTTGCTTTTAAGAAAAGCAAACTTTTCTATACCTGTCT TGAATTCATTTCTTAGCAATTCTAATTAAAGATGTTGATGTGTTTTTCTA TCTCCCCTAGTTTGTCAACAGTGTTTCAGTTTGCATTCTTTTGTGACTTG TTGATTATTTTACCTATCTTAGTTGTGATTAATTGGAGAAGTTGGCATCT TTCAGTAATATTTATTTTTCTTCCATGCAGGAAGCGACTATTTAACATGA TTAATGATCTTCCAACTATATTTGAGGTTGTTACTGGGATGGCCAAGAAA CAAGGAAAGGAAAAGTCATCAGTTTCAAATCATAGCAGTACCAAATCAAA ATCAAACTCTAAGGTATGTGTTTGAAAACCTAGCTGCTTTTACATGCAGT CATTAGAACTAGGAGTGAAAAAGTATTCTGCTATTTGTAATGTGATCTGG TTTCTGATCAGTATTTGACTATATTCTTTTTCTGATCTTCTGGGTTGGCA AATGCAGCGAGGTTCTGAATCAAAGAACACAAAAGCAATGCAATCAAAAG ACGAGGATGATGAGGGTGTGACTTTGGAAGCTGAAGATGAAGAGGAGCAT GAAGAGACTTTCTGTGGGGCATGTGGAGAGAGCTATACTTCTGATGAGTT CTGGATTTGCTGTGACATTTGTGAGAAATGGTTCCATGGAAAGTGTGTGA AGATTACACCTGCAAGAGCTGAACACATCAAGCAGTACAAATGTCCATCC TGCAGCAACAAGAGAGCTAGACCTTGACCATGTGGCTAGCATGGTTGTGA CTATAATCTTGGCAATTTTATGACTACTAATTTGTTTAGTAGGTCAAGTT TATTAGTCTTGCTGTGAATTTCAGGTATATTATTCCAGATAAAAACATTA GGTTTATGAGCTGCTGTTGATTTACCTACCATTAGGATAGTTATTTCATA AGCAGACTTTATGTTTTTGTTAAGTACTTTCTTAAATTTAATGTAGTTGT AACTGTGTTGTGTCCATAGCTTGCTCAAGTTCATACTCACATCCCTTGTC ATAGGAATCTCTTTTCAATTTTTTCACTTAACCTTTTTCGAATTCAAGTT CATTTTCTAAACGTTGGTGAAAATATTGAATGTGTAACCTCCCAGCTTTG TTAAATAGAGCATGCTCAAATTTGGAACATTTGAAGCAAGTTTTTATAAA AT
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Coding sequence (CDS) from alignment at Vu08:4269226..4273477+

>Vigun08g041600.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g041600.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g041600.1; organism=Vigna unguiculata; type=CDS; length=756bp; location=Sequence derived from: Vu08:4269226..4273477+ (Vigna unguiculata
ATGGACGCAGGATACAATCCTCGTACGGTCGAAGAGGTCTTTAGGGATTT
CAAAGGTCGCAGAGCTGCTCTGATTAAAGCTCTCACCACTGATGTTGAAG
AGTTCTACCAGCAGTGTGATCCCGAGAAGGAAAATCTTTGCCTTTATGGA
TTTCCAAGTGAGCAGTGGGAAGTCAATTTGCCAGCTGAGGAGGTGCCTCC
AGAGCTTCCAGAGCCAGCATTAGGCATTAACTTTGCCAGAGATGGGATGC
AAGATAAGGACTGGCTGTCTTTGGTTGCTGTACACAGTGATGCTTGGTTA
CTTGCTGTGGCTTTTTATTTTGGTGCTAGGTTTGGGTTTGACAAGGCTGA
TAGGAAGCGACTATTTAACATGATTAATGATCTTCCAACTATATTTGAGG
TTGTTACTGGGATGGCCAAGAAACAAGGAAAGGAAAAGTCATCAGTTTCA
AATCATAGCAGTACCAAATCAAAATCAAACTCTAAGCGAGGTTCTGAATC
AAAGAACACAAAAGCAATGCAATCAAAAGACGAGGATGATGAGGGTGTGA
CTTTGGAAGCTGAAGATGAAGAGGAGCATGAAGAGACTTTCTGTGGGGCA
TGTGGAGAGAGCTATACTTCTGATGAGTTCTGGATTTGCTGTGACATTTG
TGAGAAATGGTTCCATGGAAAGTGTGTGAAGATTACACCTGCAAGAGCTG
AACACATCAAGCAGTACAAATGTCCATCCTGCAGCAACAAGAGAGCTAGA
CCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR021998Alfin_N
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding