Vigun08g042500.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.916e-39 Identity = 78/154 (50.65%), Postives = 95/154 (61.69%), Query Frame = 1 Query: 70 FELSEYLQFDDNQWMQDDIPSFSSENVSNQVHQASN--GSYFEGSSS----------------RDTGERENRQVVRE-----RFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHPS 462 FE E L D +WM DD+ S S + +Q S+ G+ F GSSS T +N+ + R AFKT SE+EVLDDG++WRKYGKKMVKN+P+PRNYY+CSVDGC VKKRVERD+DDP VITTYEG+H H S Sbjct: 20 FEFPE-LDLSD-EWMDDDLVSAVSGMNQSYGYQTSDVAGALFSGSSSCFSHPESPSTKTYVAATATASADNQNKKEKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNHSS 171
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.610e-33 Identity = 60/102 (58.82%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 163 HQASNGSYFEGSSSRDTGERENRQVVRE-RFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHPSS 465 H N + SS + + R+ VRE RF FKT+SE++VLDDGYRWRKYG+K+VKN +PR+YYRC+ D C VKKRVER DDPR VITTYEG H H S Sbjct: 181 HDKHNTASLGVVSSLKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADDPRMVITTYEGRHLHSPS 282
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.724e-32 Identity = 65/145 (44.83%), Postives = 89/145 (61.38%), Query Frame = 1 Query: 52 FCNQWPFELSEYLQFDDNQWMQDDIPS----FSSENVSNQVHQASNGSYFEGSSSRDTGERENRQV--VRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHPSSS 468 F N F++ E +N ++++I S SSE + + + + + S + G +E+ Q R AF+T S+I+V+DDG++WRKYGKK VKNN N RNYY+CS +GC+VKKRVERD DD VITTYEG H H S S Sbjct: 29 FSNLMFFDIDE---GGNNGLIEEEISSPTSIVSSETFTGESGGSGSATTLSKKESTNRGSKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGVHNHESLS 170
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.919e-31 Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 247 RFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHP 459 RFAF T S+I+ LDDGYRWRKYG+K VKN+P PR+YYRC+ GC VKKRVER DDP V+TTYEG HTHP Sbjct: 208 RFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHP 278
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK24_ORYSI (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY24 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.280e-28 Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 226 NRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456 NR V R +T+S+I++LDDGYRWRKYG+K+VK NPNPR+YY+C+ GC V+K VER D R VITTYEG H H Sbjct: 365 NRTVREPRVVVQTMSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDLRAVITTYEGKHNH 441 HSP 2 Score: 67.0106 bits (162), Expect = 2.449e-12 Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 1 Query: 286 DDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456 DDGY WRKYG+K VK + NPR+YY+C+ C KK+VER D + Y+G H H Sbjct: 220 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDG-QITEIVYKGTHNH 275
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK24_ORYSJ (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY24 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.917e-28 Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 226 NRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456 NR V R +T+S+I++LDDGYRWRKYG+K+VK NPNPR+YY+C+ GC V+K VER D R VITTYEG H H Sbjct: 365 NRTVREPRVVVQTMSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDLRAVITTYEGKHNH 441 HSP 2 Score: 66.6254 bits (161), Expect = 2.671e-12 Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 1 Query: 286 DDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456 DDGY WRKYG+K VK + NPR+YY+C+ C KK+VER D + Y+G H H Sbjct: 220 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDG-QITEIVYKGTHNH 275
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.555e-28 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 217 ERENRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456 ++ +++ + RFAF T S+++ L+DGYRWRKYG+K VKN+P PR+YYRC+ C VKKRVER DDP VITTYEG H H Sbjct: 124 KKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSSDDPSIVITTYEGQHCH 203
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK46_HORVU (WRKY transcription factor SUSIBA2 OS=Hordeum vulgare OX=4513 GN=WRKY46 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.715e-28 Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 247 RFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456 R +T+SE+++LDDGYRWRKYG+K+VK NPNPR+YY+C+ GC V+K VER DP+ VITTYEG H H Sbjct: 350 RVVVQTVSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCPVRKHVERASHDPKSVITTYEGKHNH 419 HSP 2 Score: 65.855 bits (159), Expect = 6.032e-12 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 286 DDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVIT--TYEGNHTHP 459 DDGY WRKYG+K VK + NPR+YY+C+ C VKK +ER D +IT Y+G H HP Sbjct: 189 DDGYNWRKYGQKHVKGSENPRSYYKCTHPNCEVKKLLERAVDG---LITEVVYKGRHNHP 245
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 8.457e-28 Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 226 NRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456 +R V R +T SE+++LDDGYRWRKYG+K+VK NP PR+YY+C+ GC V+K VER DP+ V+TTYEG H H Sbjct: 389 HRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNH 465 HSP 2 Score: 70.4774 bits (171), Expect = 1.502e-13 Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 79 SEYLQFDDNQWMQDDIPSFSSENVSNQVHQASNGSYFEGSSSRDTGERENRQV-VRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456 ++ +Q + N Q + P S QV S+G +S+ +RE V + E + + ++ + DDGY WRKYG+K VK + PR+YY+C+ GC VKK+VER D + Y+G H H Sbjct: 165 AQAVQANANMQPQTEYPPPS------QVQSFSSGQAQIPTSAPLPAQRETSDVTIIEHRSQQPLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVERSLDG-QVTEIIYKGQHNH 284
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.238e-28 Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 244 ERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHP 459 +R+AF+T S++++LDDGYRWRKYG+K VKNN PR+YYRC+ GC VKK+V+R D V+TTYEG H+HP Sbjct: 53 QRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHP 124 The following BLAST results are available for this feature:
BLAST of Vigun08g042500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g042500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042500.1; organism=Vigna unguiculata; type=mRNA; length=747bpback to top protein sequence of Vigun08g042500.1_Vu_IT97K-499-35_v1.1 >Vigun08g042500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=157bpback to top mRNA from alignment at Vu08:4384891..4386273+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g042500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042500.1; organism=Vigna unguiculata; type=mRNA; length=1383bp; location=Sequence derived from: Vu08:4384891..4386273+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:4384891..4386273+ >Vigun08g042500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042500.1; organism=Vigna unguiculata; type=CDS; length=471bp; location=Sequence derived from: Vu08:4384891..4386273+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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