Vigun08g042500.1

Transcript Overview
NameVigun08g042500.1
Unique NameVigun08g042500.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length747
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:4384891..4386273 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR372Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL097Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL061Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL785Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL337Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0583Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvuL0118Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0320Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0360Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0750Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL529Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL704Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR588Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR608Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL309Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL288Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL421Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL390Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL560Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR410Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL386Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL470Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL599Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL324Cicer arietinum
carvuL404Cicer arietinum
ccavuL327Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL433Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR669Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR677Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR679Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR680Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR715Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL253Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL691Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR463Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan04g233600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.009G080000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.001G039900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.2g174720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_02G00533.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Tiffany.R1.2g141120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0123400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_09845Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr08.323Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004498790.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_02890.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
LR48_mrnaVigan07g251800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va07G064870.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_11405.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
XM_058925115.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_07097.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.02G063000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
jg35585.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_15100.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
PvulFLAVERTChr09.1000519Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_027334649.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat06G0062800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
XM_058925133.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va04G065940.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_09134Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.03G155500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg55139.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigan.03G248400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.3g210400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_014647898.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
XM_058869004.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_03G01733.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr09.1502Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g042500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g222700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g222700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g042500Vigun08g042500_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g042500.1_Vu_IT97K-499-35_v1.1Vigun08g042500.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide
Vigun08g042500.1Vigun08g042500.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g042500.1.v1.1.five_prime_UTR.1Vigun08g042500.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g042500.1.v1.1.CDS.1Vigun08g042500.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g042500.1.v1.1.CDS.2Vigun08g042500.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g042500.1.v1.1.CDS.3Vigun08g042500.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g042500.1.v1.1.three_prime_UTR.1Vigun08g042500.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.916e-39
Identity = 78/154 (50.65%), Postives = 95/154 (61.69%), Query Frame = 1
Query:   70 FELSEYLQFDDNQWMQDDIPSFSSENVSNQVHQASN--GSYFEGSSS----------------RDTGERENRQVVRE-----RFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHPS 462
            FE  E L   D +WM DD+ S  S    +  +Q S+  G+ F GSSS                  T   +N+    +     R AFKT SE+EVLDDG++WRKYGKKMVKN+P+PRNYY+CSVDGC VKKRVERD+DDP  VITTYEG+H H S
Sbjct:   20 FEFPE-LDLSD-EWMDDDLVSAVSGMNQSYGYQTSDVAGALFSGSSSCFSHPESPSTKTYVAATATASADNQNKKEKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNHSS 171          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.610e-33
Identity = 60/102 (58.82%), Postives = 72/102 (70.59%), Query Frame = 1
Query:  163 HQASNGSYFEGSSSRDTGERENRQVVRE-RFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHPSS 465
            H   N +     SS    + + R+ VRE RF FKT+SE++VLDDGYRWRKYG+K+VKN  +PR+YYRC+ D C VKKRVER  DDPR VITTYEG H H  S
Sbjct:  181 HDKHNTASLGVVSSLKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADDPRMVITTYEGRHLHSPS 282          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.724e-32
Identity = 65/145 (44.83%), Postives = 89/145 (61.38%), Query Frame = 1
Query:   52 FCNQWPFELSEYLQFDDNQWMQDDIPS----FSSENVSNQVHQASNGSYFEGSSSRDTGERENRQV--VRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHPSSS 468
            F N   F++ E     +N  ++++I S     SSE  + +   + + +      S + G +E+ Q      R AF+T S+I+V+DDG++WRKYGKK VKNN N RNYY+CS +GC+VKKRVERD DD   VITTYEG H H S S
Sbjct:   29 FSNLMFFDIDE---GGNNGLIEEEISSPTSIVSSETFTGESGGSGSATTLSKKESTNRGSKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGVHNHESLS 170          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.919e-31
Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 1
Query:  247 RFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHP 459
            RFAF T S+I+ LDDGYRWRKYG+K VKN+P PR+YYRC+  GC VKKRVER  DDP  V+TTYEG HTHP
Sbjct:  208 RFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHP 278          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK24_ORYSI (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.280e-28
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 1
Query:  226 NRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456
            NR V   R   +T+S+I++LDDGYRWRKYG+K+VK NPNPR+YY+C+  GC V+K VER   D R VITTYEG H H
Sbjct:  365 NRTVREPRVVVQTMSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDLRAVITTYEGKHNH 441          

HSP 2 Score: 67.0106 bits (162), Expect = 2.449e-12
Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 1
Query:  286 DDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456
            DDGY WRKYG+K VK + NPR+YY+C+   C  KK+VER  D  +     Y+G H H
Sbjct:  220 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDG-QITEIVYKGTHNH 275          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK24_ORYSJ (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.917e-28
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 1
Query:  226 NRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456
            NR V   R   +T+S+I++LDDGYRWRKYG+K+VK NPNPR+YY+C+  GC V+K VER   D R VITTYEG H H
Sbjct:  365 NRTVREPRVVVQTMSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDLRAVITTYEGKHNH 441          

HSP 2 Score: 66.6254 bits (161), Expect = 2.671e-12
Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 1
Query:  286 DDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456
            DDGY WRKYG+K VK + NPR+YY+C+   C  KK+VER  D  +     Y+G H H
Sbjct:  220 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDG-QITEIVYKGTHNH 275          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.555e-28
Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = 1
Query:  217 ERENRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456
            ++  +++ + RFAF T S+++ L+DGYRWRKYG+K VKN+P PR+YYRC+   C VKKRVER  DDP  VITTYEG H H
Sbjct:  124 KKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSSDDPSIVITTYEGQHCH 203          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK46_HORVU (WRKY transcription factor SUSIBA2 OS=Hordeum vulgare OX=4513 GN=WRKY46 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.715e-28
Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1
Query:  247 RFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456
            R   +T+SE+++LDDGYRWRKYG+K+VK NPNPR+YY+C+  GC V+K VER   DP+ VITTYEG H H
Sbjct:  350 RVVVQTVSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCPVRKHVERASHDPKSVITTYEGKHNH 419          

HSP 2 Score: 65.855 bits (159), Expect = 6.032e-12
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1
Query:  286 DDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVIT--TYEGNHTHP 459
            DDGY WRKYG+K VK + NPR+YY+C+   C VKK +ER  D    +IT   Y+G H HP
Sbjct:  189 DDGYNWRKYGQKHVKGSENPRSYYKCTHPNCEVKKLLERAVDG---LITEVVYKGRHNHP 245          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.457e-28
Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 1
Query:  226 NRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456
            +R V   R   +T SE+++LDDGYRWRKYG+K+VK NP PR+YY+C+  GC V+K VER   DP+ V+TTYEG H H
Sbjct:  389 HRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNH 465          

HSP 2 Score: 70.4774 bits (171), Expect = 1.502e-13
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 1
Query:   79 SEYLQFDDNQWMQDDIPSFSSENVSNQVHQASNGSYFEGSSSRDTGERENRQV-VRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTH 456
            ++ +Q + N   Q + P  S      QV   S+G     +S+    +RE   V + E  + + ++  +  DDGY WRKYG+K VK +  PR+YY+C+  GC VKK+VER  D  +     Y+G H H
Sbjct:  165 AQAVQANANMQPQTEYPPPS------QVQSFSSGQAQIPTSAPLPAQRETSDVTIIEHRSQQPLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVERSLDG-QVTEIIYKGQHNH 284          
BLAST of Vigun08g042500.1 vs. DB:Swiss
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.238e-28
Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 1
Query:  244 ERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNHTHP 459
            +R+AF+T S++++LDDGYRWRKYG+K VKNN  PR+YYRC+  GC VKK+V+R   D   V+TTYEG H+HP
Sbjct:   53 QRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHP 124          
The following BLAST results are available for this feature:
BLAST of Vigun08g042500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
WRK50_ARATH1.916e-3950.65Probable WRKY transcription factor 50 OS=Arabidops... [more]
WRK13_ARATH7.610e-3358.82Probable WRKY transcription factor 13 OS=Arabidops... [more]
WRK51_ARATH4.724e-3244.83Probable WRKY transcription factor 51 OS=Arabidops... [more]
WRK48_ARATH7.919e-3171.83Probable WRKY transcription factor 48 OS=Arabidops... [more]
WRK24_ORYSI4.280e-2861.04WRKY transcription factor WRKY24 OS=Oryza sativa s... [more]
WRK24_ORYSJ4.917e-2861.04WRKY transcription factor WRKY24 OS=Oryza sativa s... [more]
WRK57_ARATH6.555e-2858.75Probable WRKY transcription factor 57 OS=Arabidops... [more]
WRK46_HORVU6.715e-2862.86WRKY transcription factor SUSIBA2 OS=Hordeum vulga... [more]
WRKY4_ARATH8.457e-2857.14Probable WRKY transcription factor 4 OS=Arabidopsi... [more]
WRK75_ARATH9.238e-2861.11Probable WRKY transcription factor 75 OS=Arabidops... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 95..154
e-value: 2.5E-36
score: 136.7
IPR003657WRKY domainPFAMPF03106WRKYcoord: 96..153
e-value: 3.6E-25
score: 88.0
IPR003657WRKY domainPROSITEPS50811WRKYcoord: 90..155
score: 31.146
IPR036576WRKY domain superfamilyGENE3D2.20.25.80coord: 80..156
e-value: 1.1E-31
score: 110.3
IPR036576WRKY domain superfamilySUPERFAMILY118290WRKY DNA-binding domaincoord: 88..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..77

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g042500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042500.1; organism=Vigna unguiculata; type=mRNA; length=747bp
CTTCTCATTACCTTTGAAACTTCCTAGATTTCTAGCTCCTAGGAAGCTAC
CATGAAGCACCCTTTCTAATAAAACTATATCACTGTGGCGTGCCTTTATA
TATTGTCTCCGCCGTGATCCTTTCTTTTCATATTATTCAGTGTGGTGCCA
AAATGACAGACAACAATCCAAAACCACCACCTGATACACCCGACAGTGAT
GATTTCTGCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGCAATTCGA
TGATAACCAGTGGATGCAGGATGATATCCCGTCTTTTTCTTCTGAGAATG
TCTCAAACCAGGTTCATCAAGCCAGTAATGGAAGCTACTTTGAAGGGTCT
TCTAGCAGAGATACTGGTGAACGTGAGAATCGGCAAGTTGTTAGAGAGAG
ATTTGCATTCAAAACAATTTCTGAGATTGAAGTGCTAGATGATGGATACA
GATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAATCCCAATCCAAGG
AATTACTATAGATGTTCAGTGGATGGGTGCGCTGTGAAGAAGAGAGTGGA
GAGAGATAAAGATGACCCTAGGTGTGTAATAACAACCTACGAAGGCAACC
ACACTCATCCAAGTTCTTCCTAGGTTGAATATGAAGAAGTTTTGGCACTG
TAATAAGCTTTTTTTGCCACAGCTACAACTAGTACTTTCGTATTAACGCT
GCAAGTACTCTTGCCAAGTTTTATCATGTTCATTCATGTTTGATTTC
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protein sequence of Vigun08g042500.1_Vu_IT97K-499-35_v1.1

>Vigun08g042500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=157bp
MTDNNPKPPPDTPDSDDFCNQWPFELSEYLQFDDNQWMQDDIPSFSSENV
SNQVHQASNGSYFEGSSSRDTGERENRQVVRERFAFKTISEIEVLDDGYR
WRKYGKKMVKNNPNPRNYYRCSVDGCAVKKRVERDKDDPRCVITTYEGNH
THPSSS*
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mRNA from alignment at Vu08:4384891..4386273+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g042500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042500.1; organism=Vigna unguiculata; type=mRNA; length=1383bp; location=Sequence derived from: Vu08:4384891..4386273+ (Vigna unguiculata
CTTCTCATTACCTTTGAAACTTCCTAGATTTCTAGCTCCTAGGAAGCTAC CATGAAGCACCCTTTCTAATAAAACTATATCACTGTGGCGTGCCTTTATA TATTGTCTCCGCCGTGATCCTTTCTTTTCATATTATTCAGTGTGGTGCCA AAATGACAGACAACAATCCAAAACCACCACCTGATACACCCGACAGTGAT GATTTCTGCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGCAATTCGA TGATAACCAGTGGATGCAGGATGATATCCCGTCTTTTTCTTCTGAGAATG TCTCAAACCAGGTTCATCAAGCCAGTAATGGAAGCTACTTTGAAGGGTCT TCTAGCAGTAAGCATATATTAAACATATGTAGTAGTTCTTCAAGACATGA AAGTGTGCTTTGTTTTGTAGCTTCAGTATGTTTATTTAGCCATTTTCATT GACTGATTCAATTGATTACTACAGTAACTGATATGAACATTTTTAAATAT TTGTCTCCCTTTTGCTTATAGTTATTGACTGATGCGAACATGTGTGTGAT TTTAGGAGATACTGGTGAACGTGAGAATCGGCAAGTTGTTAGAGAGAGAT TTGCATTCAAAACAATTTCTGAGATTGAAGTGCTAGATGATGGATACAGA TGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAATCCCAATCCAAGGTA TGTAGTATATGCTTATGATAGAATATGTTATTTTTGTTCATATAGTTAAT TATCATGCTGCTAATTAAACGTAAACAACTGATGAAATAGATTAACGAAA CCAATTACGCGATGAGAGAAAAGGTAAACTAAACACATAAAATCACATAC TTGCATGTCAGAGCTAATTAGCACATGTTTTGGTTATGCTTCTATACCAA GTGTTATCCACTTTCTATCTTGAAGCTACAGCTTCTGCATTATTCTAAGA TTTTGACGTGAAAATTGAAGGGTAGATGCATTCAAAAAGGTTTCTCACAC GTACCCTAATGAACAAATATAGGTTGCAATACTACATAAAACGTAGAAAG ATGAAGATACAAATTTCTTTGGAAATATTTGTTTTCATTTTTTCTGTTTT TATATGGCTAAATTAGCATATACTCATCATTACAGGAATTACTATAGATG TTCAGTGGATGGGTGCGCTGTGAAGAAGAGAGTGGAGAGAGATAAAGATG ACCCTAGGTGTGTAATAACAACCTACGAAGGCAACCACACTCATCCAAGT TCTTCCTAGGTTGAATATGAAGAAGTTTTGGCACTGTAATAAGCTTTTTT TGCCACAGCTACAACTAGTACTTTCGTATTAACGCTGCAAGTACTCTTGC CAAGTTTTATCATGTTCATTCATGTTTGATTTC
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Coding sequence (CDS) from alignment at Vu08:4384891..4386273+

>Vigun08g042500.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042500.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042500.1; organism=Vigna unguiculata; type=CDS; length=471bp; location=Sequence derived from: Vu08:4384891..4386273+ (Vigna unguiculata
ATGACAGACAACAATCCAAAACCACCACCTGATACACCCGACAGTGATGA
TTTCTGCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGCAATTCGATG
ATAACCAGTGGATGCAGGATGATATCCCGTCTTTTTCTTCTGAGAATGTC
TCAAACCAGGTTCATCAAGCCAGTAATGGAAGCTACTTTGAAGGGTCTTC
TAGCAGAGATACTGGTGAACGTGAGAATCGGCAAGTTGTTAGAGAGAGAT
TTGCATTCAAAACAATTTCTGAGATTGAAGTGCTAGATGATGGATACAGA
TGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAATCCCAATCCAAGGAA
TTACTATAGATGTTCAGTGGATGGGTGCGCTGTGAAGAAGAGAGTGGAGA
GAGATAAAGATGACCCTAGGTGTGTAATAACAACCTACGAAGGCAACCAC
ACTCATCCAAGTTCTTCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
IPR036576WRKY_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity