Vigun08g045300.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana OX=3702 GN=WRKY40 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 4.097e-41 Identity = 103/294 (35.03%), Postives = 146/294 (49.66%), Query Frame = 1 Query: 1 MLVQVLNTAVIMDEKVESLKSELQRVREENNTLRVMFEVLSSKYTKLESHLQE-INKEQHKGMNQI--------------------GSVTEPILD-----VNKRRRLEFPTAKKPLQIFVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGALHEPSSST------PRGSSVANQLPSIANDKEAMNILALSALSQTDRRHSEEVMHQHN-----HETNVKVEEYVSSLIKDPDFTMSLAEAVARTITGELKQQD 771 + + V V D +L EL RV EN L M ++ Y L L E +NK +QI G V+E + K++R E +K +++ +T D +L+VKDGYQWRKYGQKVT+DN SPRAYF+C+ AP C KKKVQR + D+S+LVATY+GEHNH + S+ G S + P AN + ++ + ++ D S++V + + VE+ SSL KDP+FT +LA AV TG+L QQ+ Sbjct: 15 LTIGVTRMRVEEDPPTSALVEELNRVSAENKKLSEMLTLMCDNYNVLRKQLMEYVNKSNITERDQISPPKKRKSPAREDAFSCAVIGGVSESSSTDQDEYLCKKQREETVVKEKVSRVYYKTEASDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCACAPSCSVKKKVQRSVEDQSVLVATYEGEHNHPMPSQIDSNNGLNRHISHGGSAST--PVAANRRSSLTV----PVTTVDMIESKKVTSPTSRIDFPQVQKLLVEQMASSLTKDPNFTAALAAAV----TGKLYQQN 298
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=WRKY18 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 6.048e-39 Identity = 100/292 (34.25%), Postives = 137/292 (46.92%), Query Frame = 1 Query: 37 DEKVESLKSELQRVREENNTLRVMFEVLSSKYTKLESHLQEINKEQHKGMNQIGSVTEPILDVNKRRR-----LEFP-------------------------------TAKKPLQ----------IFVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNH-GALHEPSSSTPRGSSVANQLPSIANDKEAMNILALSALSQTDRRHS-EEVMHQHNHETNVKVEEYVSSLIKDPDFTMSLAEAVARTITGELKQQ 768 DE L+ EL RV EN L M + Y +L +HL+++ Q + Q + + KR++ L FP + K+P+ ++V T D SL VKDG+QWRKYGQKVT+DN SPRAYFRCS AP CP KKKVQR D S+LVATY+G HNH G +T +G S L + +N AL + +R ++ +EV+ +++ SSL KD FT +LA A I+G L +Q Sbjct: 43 DESASELREELNRVNSENKKLTEMLARVCESYNELHNHLEKLQSRQSPEIEQTD------IPIKKRKQDPDEFLGFPIGLSSGKTENSSSNEDHHHHHQQHEQKNQLLSCKRPVTDSFNKAKVSTVYVPTETSDTSLTVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNHLGPNASEGDATSQGGSSTVTL-------DLVNGCHRLALEKNERDNTMQEVL----------IQQMASSLTKDSKFTAALAAA----ISGRLMEQ 307
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana OX=3702 GN=WRKY60 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.164e-37 Identity = 89/253 (35.18%), Postives = 120/253 (47.43%), Query Frame = 1 Query: 28 VIMDEKVESLKSELQRVREENNTLRVMFEVLSSKYTKLESHLQEINKEQHKGMNQIGSVTEPILDVNKRRRLEFPTAKKPLQI----------------FVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGALHEPSSSTPRGSSVANQLPSIANDKEAMNILALSALSQTDRRHSEEVMHQHNHETNVKVEEYVSSLIKDPDFTMSLAEAVA 738 ++ DEK L+ E+ RV EN L M + KY L + ++E+ + K + + + K+ EF ++ L + + D SL VKDGYQWRKYGQK+T+DN SPRAYFRCS +P C KKKVQR D S LVATY+G HNH H S T + V L + KE I +EV+ V++ SSL KDP FT +LA A++ Sbjct: 36 LVKDEKRNMLQDEINRVNSENKKLTEMLARVCEKYYALNNLMEEL--QSRKSPESVNFQNKQLTGKRKQELDEFVSSPIGLSLGPIENITNDKATVSTAYFAAEKSDTSLTVKDGYQWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNHTGPHASVSRTVKLDLVQGGLEPVEEKKERGTI--------------QEVL----------VQQMASSLTKDPKFTAALATAIS 262
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK28_ORYSJ (WRKY transcription factor WRKY28 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY28 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.953e-37 Identity = 95/292 (32.53%), Postives = 129/292 (44.18%), Query Frame = 1 Query: 37 DEKVESLKSELQRVREENNTLRVMFEVLSSKYTKLESHLQE---------INKEQHKGMNQIGSVTEP----------ILDVNKRRRLEFP--------TAKKPLQI--------------------------FVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGAL--HEPSSSTPRGSSVANQLPSIANDKEAMNILALSALSQTDRRHSEEVMHQHNHETNVKVEEYVSSLIKDPDFTMSLAEAVARTI 747 D +VE+L++EL+R EEN L M + +KYT+L+ + + +N H+ G P + D R+ P P Q+ FV P D SL+VKDGYQWRKYGQKVTKDN PRAYFRCS AP CP KKKVQR D ++LVATY+GEHNH H+ S T + + P + A ++ S EV + N E+ ++L +DP F +L A++ I Sbjct: 105 DHEVEALEAELRRASEENKKLTEMLRAVVAKYTELQGQVNDMMSAAAAAAVNAGNHQSSTSEGGSVSPSRKRIRSVDSLDDAAHHRKPSPPFVAAAAAAAYASPDQMECTSAAAAAAAKRVVREDCKPKVSKRFVHADPSDLSLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEHNHAQPPHHDAGSKTAAAAKHSQHQPPPS---AAAAVVRQQQEQAAAAGPSTEVAARKN-----LAEQMAATLTRDPGFKAALVTALSGRI 388
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK28_ORYSI (WRKY transcription factor WRKY28 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY28 PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 2.771e-36 Identity = 94/292 (32.19%), Postives = 128/292 (43.84%), Query Frame = 1 Query: 37 DEKVESLKSELQRVREENNTLRVMFEVLSSKYTKLESHLQE---------INKEQHKGMNQIGSVTEP----------ILDVNKRRRLEFP--------TAKKPLQI--------------------------FVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGAL--HEPSSSTPRGSSVANQLPSIANDKEAMNILALSALSQTDRRHSEEVMHQHNHETNVKVEEYVSSLIKDPDFTMSLAEAVARTI 747 D +VE+L++EL+R EEN L M + +KY +L+ + + +N H+ G P + D R+ P P Q+ FV P D SL+VKDGYQWRKYGQKVTKDN PRAYFRCS AP CP KKKVQR D ++LVATY+GEHNH H+ S T + + P + A ++ S EV + N E+ ++L +DP F +L A++ I Sbjct: 105 DHEVEALEAELRRASEENKKLTEMLRAVVAKYPELQGQVNDMMSAAAAAAVNAGNHQSSTSEGGSVSPSRKRIRSVDSLDDAAHHRKPSPPFVAAAAAAAYASPDQMECTSAAAAAAAKRVVREDCKPKVSKRFVHADPSDLSLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEHNHAQPPHHDAGSKTAAAAKHSQHQPPPS---AAAAVVRQQQEQAAAAGPSTEVAARKN-----LAEQMAATLTRDPGFKAALVTALSGRI 388
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK76_ORYSI (WRKY transcription factor WRKY76 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY76 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.413e-35 Identity = 74/170 (43.53%), Postives = 93/170 (54.71%), Query Frame = 1 Query: 271 QIFVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNH-----------GALHEPSSSTPRGSSVANQLPSIAND--KEAMNILALSALSQTDRRHSEEVMHQ--HNHETNVKVEEYVSSLIKDPDFTMSLAEAV 735 ++ R P D SL+VKDGYQWRKYGQKVT+DN SPRAYFRC+ AP CP KKKVQR D S+LVATY+GEHNH A+ S P S+ + P+I D K + + A +EV + VE+ S+L DP FT +LA A+ Sbjct: 151 RVCRRIDPSDTSLVVKDGYQWRKYGQKVTRDNPSPRAYFRCAFAPSCPVKKKVQRSAEDSSLLVATYEGEHNHPHPSPRAGELPAAVGGAGGSLPCSISINSSGPTITLDLTKNGGAVQVVEAAHPPPPPDLKEVCREVASPEFRTALVEQMASALTSDPKFTGALAAAI 320
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK71_ORYSI (WRKY transcription factor WRKY71 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY71 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.125e-35 Identity = 71/166 (42.77%), Postives = 89/166 (53.61%), Query Frame = 1 Query: 271 QIFVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGALHEPSSSTPRGSSVANQLPSIANDKEAMNILALSALSQTDRRHSEEVMHQHNHETNVK-------VEEYVSSLIKDPDFTMSLAEAVARTI 747 +++V P D SL+VKDGYQWRKYGQKVTKDN PRAYFRCS AP CP KKKVQR D +ILVATY+GEHNHG P S + S + + A A A R+H V++ E+ +L +DP F +L A++ I Sbjct: 178 KLYVHADPSDLSLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSAEDNTILVATYEGEHNHGQPPPPLQSAAQNSDGSGK---SAGKPPHAPAAAPPAPVVPHRQHEPVVVNGEQQAAAASEMIRRNLAEQMAMTLTRDPSFKAALVTALSGRI 340
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK71_ORYSJ (WRKY transcription factor WRKY71 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY71 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.293e-35 Identity = 71/166 (42.77%), Postives = 89/166 (53.61%), Query Frame = 1 Query: 271 QIFVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGALHEPSSSTPRGSSVANQLPSIANDKEAMNILALSALSQTDRRHSEEVMHQHNHETNVK-------VEEYVSSLIKDPDFTMSLAEAVARTI 747 +++V P D SL+VKDGYQWRKYGQKVTKDN PRAYFRCS AP CP KKKVQR D +ILVATY+GEHNHG P S + S + + A A A R+H V++ E+ +L +DP F +L A++ I Sbjct: 178 KLYVHADPSDLSLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSAEDNTILVATYEGEHNHGQPPPPLQSAAQNSDGSGK---SAGKPPHAPAAAPPAPVVPHRQHEPVVVNGEQQAAAASEMIRRNLAEQMAMTLTRDPSFKAALVTALSGRI 340
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK76_ORYSJ (WRKY transcription factor WRKY76 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY76 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 6.212e-34 Identity = 75/170 (44.12%), Postives = 93/170 (54.71%), Query Frame = 1 Query: 271 QIFVRTHPMDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNH-------GAL----HEPSSSTPRGSSVANQLPSIAND--KEAMNILALSALSQTDRRHSEEVMHQ--HNHETNVKVEEYVSSLIKDPDFTMSLAEAV 735 ++ R P D SL+VKDGYQWRKYGQKVT+DN SPRAYFRC+ AP CP KKKVQR D S+LVATY+GEHNH G L S P S+ + P+I D K + + A +EV + VE+ S+L DP FT +LA A+ Sbjct: 151 RVCRRIDPSDTSLVVKDGYQWRKYGQKVTRDNPSPRAYFRCAFAPSCPVKKKVQRSAEDSSLLVATYEGEHNHPHPSPRAGELPAAAGGAGGSLPCSISINSSGPTITLDLTKNGGAVQVVEAAHPPPPPDLKEVCREVASPEFRTALVEQMASALTSDPKFTGALAAAI 320
BLAST of Vigun08g045300.1 vs. DB:Swiss
Match: WRK62_ORYSJ (WRKY transcription factor WRKY62 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY62 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.210e-29 Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 313 VKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHG 492 VKDGYQWRKYGQKVT+DN PRAYFRC+ AP CP KKK+QRC D+S+LVATY+GEHNH Sbjct: 143 VKDGYQWRKYGQKVTRDNPYPRAYFRCAFAPSCPVKKKLQRCAEDRSMLVATYEGEHNHA 202 The following BLAST results are available for this feature:
BLAST of Vigun08g045300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g045300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g045300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g045300.1; organism=Vigna unguiculata; type=mRNA; length=1513bpback to top protein sequence of Vigun08g045300.1_Vu_IT97K-499-35_v1.1 >Vigun08g045300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g045300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g045300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=268bpback to top mRNA from alignment at Vu08:4776933..4779170- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g045300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g045300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g045300.1; organism=Vigna unguiculata; type=mRNA; length=2238bp; location=Sequence derived from: Vu08:4776933..4779170- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:4776933..4779170- >Vigun08g045300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g045300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g045300.1; organism=Vigna unguiculata; type=CDS; length=804bp; location=Sequence derived from: Vu08:4776933..4779170- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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