Vigun08g049500.3

Transcript Overview
NameVigun08g049500.3
Unique NameVigun08g049500.3_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2684
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:5550652..5554066 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR380Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL091Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL490Pisum sativum Cameor genome v1aPisum sativum
psvuL620Pisum sativum Cameor genome v1aPisum sativum
pvvuL058Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL435Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL772Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL339Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0468Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0469Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL422Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0641Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0928Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0051Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0119Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0363Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0751Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1010Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL532Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL704Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR603Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR609Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL289Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL269Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL456Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL427Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL440Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL561Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL307Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL392Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL474Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL599Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL325Cicer arietinum
carvuL388Cicer arietinum
ccavuL425Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR661Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR677Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR700Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR716Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL229Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL244Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL678Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g049500Vigun08g049500_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g049500.3Vigun08g049500.3_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g049500.3_Vu_IT97K-499-35_v1.1Vigun08g049500.3_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g049500.3.v1.1.CDS.2Vigun08g049500.3.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g049500.3.v1.1.CDS.1Vigun08g049500.3.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g049500.3.v1.1.three_prime_UTR.1Vigun08g049500.3.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g049500.3.v1.1.five_prime_UTR.1Vigun08g049500.3.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUB6 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.502e-21
Identity = 96/319 (30.09%), Postives = 160/319 (50.16%), Query Frame = 1 
Query:  394 MTRRREAAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDES--KNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLV--LFLVNSIGDMEVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVAXXXXXXXXXXXXXAQKRASRILEILRVDKG-------------KQISGSYGLGAAVSAPICGSSSAKP 1299
            + ++ +    VR+L K++ E R  +   G +   +  L+ +   N+         AL NL + N+ NK  ++  G +  + K+I       S       A +L LS L+  KP+IGSS ++SF V  L  L D + +Q K DAL ALYNLS Y  N+  +L ++++  L ++ S G+    E++LA+L NL S+REG++ +   Q  I  L  VL+  D+ E QE+A   L+++   S    Q +++ GV  SL+ +S+ GS   + ++ ++L + R  +              K +S    + A VSAP    S  KP
Sbjct:  438 LAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISC-----SQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLL--LQD-TKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVE-QEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAPRKTVSAPMAIPAPVSAP---ESEVKP 744
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB7_ARATH (U-box domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=PUB7 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.811e-20
Identity = 86/284 (30.28%), Postives = 154/284 (54.23%), Query Frame = 1 
Query:  394 MTRRREAAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDES--KNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLV---LFLVNSIGDMEVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVAXXXXXXXXXXXXXAQKRASRILEILRVDKGKQ 1230
            + ++ +   K+RLL K+D E R  +   G +  L+  L  +   N+     +   AL NL + N+ NK  ++  G +  + K+I S +   S+      A +L LS LD  K +IGSS ++ FLV+ LQ    +  +Q K DAL ALYNLS Y  N+  +L ++++     L+ S G+    E++LA+L NL S++EG+    + Q  I  L  VL+  D+ E QE+A   L+++ +      Q +++ GV  SL+ +S+ G+   ++++ ++L + R ++ ++
Sbjct:  438 LEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSAT-----ALYLNLSCLDEAKSVIGSSQAVPFLVQLLQK---EIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE-QEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQR 712
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.579e-18
Identity = 89/273 (32.60%), Postives = 143/273 (52.38%), Query Frame = 1 
Query:  403 RREAAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDESKNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVL----FLVNSIGDMEVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVAXXXXXXXXXXXXXAQKRASRILEIL 1209
            +R AA ++RLLAK ++  R  +A  GAIP LV +L  S         +    L++   ++ NKA+IV   ++ K+++++++         E   A    LS +D NK  IG++ +I  L+  L       S + K+DA  A++NL IY  N    ++  +V+    FLV+  G M   + AL++LS L    EG K + A  + IP LV+V+  T SP  +E A+ IL ++         A   AGV  +L ELS  G+  A+++AS ILE++
Sbjct:  340 QRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSI---HENNKASIVDSHAIPKIVEVLKT---GSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCD----GSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGM--IDEALSLLSILAGNPEG-KIVIARSEPIPPLVEVIK-TGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELM 598
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.441e-17
Identity = 85/289 (29.41%), Postives = 149/289 (51.56%), Query Frame = 1 
Query:  391 SMTRRREAAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDESKNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVLFLVNSIGDME-VTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVAXXXXXXXXXXXXXAQKRASRILEILRVDKGKQISGSYGLG 1254
            S+  +R+A  ++RLLAK +++ R  +   GAI  LV +L  + +       +    L++   ND NK AI   G++E ++ ++E+     S   E   A    LS ++ NK  IG S +I  LV  L       + + K+DA  AL+NLSI+  N A ++++  V +L++ +     + ++A+A+L+NL +  EGR AI   +  IP+LV+V+    S   +E A+  L+ ++  S      +++ G    L+ LS  G+  A+++A  +L   R     Q  G+ G G
Sbjct:  554 SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSI---NDNNKKAIADAGAIEPLIHVLENGS---SEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLL----GNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGIPLLVEVVEL-GSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFR----NQRHGNAGRG 826
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.766e-15
Identity = 76/243 (31.28%), Postives = 124/243 (51.03%), Query Frame = 1 
Query:  403 RREAAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDESKNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVLFLVNSIGDM--EVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEA 1125
            +R AA ++RLLAK + + R  +A  GAIP LV +L    + +     +    L++    + NK AIV  G++  ++++++          E   A    LS +D NK  IG+  +I  LV  L    ++ + + K+DA  AL+NL IY  N    +   ++  L   + +    + + ALAIL+ L S  EG KAI    D++P LV+ +  T SP  +E A+ +L+   H   GD Q ++EA
Sbjct:  369 QRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSIC---ENNKGAIVSAGAIPGIVQVLKKG---SMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLL----NEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEG-KAIIGSSDAVPSLVEFIR-TGSPRNRENAAAVLV---HLCSGDPQHLVEA 596
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.026e-15
Identity = 84/281 (29.89%), Postives = 152/281 (54.09%), Query Frame = 1 
Query:  400 RRREAAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDESKNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVLFLVNSIGDM--EVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVAXXXXXXXXXXXXXAQKRASRILEILRVDKGKQIS 1236
            ++R AA ++RLLAK +++ R  +A  GAIP LV +L            +    L++   N+ NK AIV  G++  +++++++         E   A    LS +D NK  IG++ +I  L+    SL ++ + + K+DA  A++NL IY  N +  ++  +V  L   + D    + + ALAIL+ L + +EG+ AI A  +SIP+LV+++  T SP  +E A+ IL  +   +        E G   +L EL+  G+  A+++A+ +LE+++  +G  ++
Sbjct:  361 QQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSI---NEGNKGAIVDAGAITDIVEVLKNG---SMEARENAAATLFSLSVIDENKVAIGAAGAIQALI----SLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAI-AEAESIPVLVEIIR-TGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLELIQQTEGVAVT 629
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.837e-15
Identity = 80/268 (29.85%), Postives = 146/268 (54.48%), Query Frame = 1 
Query:  421 KVRLLAKEDLEVRGTLAMLGAIPPLVAMLDES--KNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVLFLVN-SIGDME-VTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVAXXXXXXXXXXXXXAQKRASRILEILR 1212
            ++R+L K+D E R  +   G +  L+  L  +  +N+         AL NL + N+ NK  ++  G +  + +++ +P    S     + A +L LS L+  KP+IGSS ++ F+V  L +   ++  Q K DAL +L++LS YP N+  +L  DLV  L + +I D +  TE++LA+L NLV    G+  + +    +  L  +L+ T  P  QE+A  +L+++ + S    + +++ GV  SL+ +S+ G+   ++RA ++L + R
Sbjct:  445 QIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGS-----VTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWT---ETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILD-TGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFR 703
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.918e-15
Identity = 82/269 (30.48%), Postives = 146/269 (54.28%), Query Frame = 1 
Query:  412 AAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDESKNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIG-SSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVLFLVNSIG-DMEVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVAXXXXXXXXXXXXXAQKRASRILEILR 1212
            AA ++R L    +E R  +   GAI PL+++L   +        +    L++   ++ NKA IV+VG++E ++ ++ +  G D +  E   A+   LS L  N+  IG S+A+I  LV  L     K + + K+DA  AL+NLSI   N A +++   V +LV  +  D+E+ ++A+A+L+NL +  EGR+AI   +  IP+LV+ ++   S   +E A+ +L+ +   S      +++ G    L+ LS  G+  A+++A ++L   R
Sbjct:  492 AAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSI---SELNKAMIVEVGAIEPLVHVLNT--GNDRA-KENSAASLFSLSVLQVNRERIGQSNAAIQALVNLL----GKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAI-VREGGIPLLVETVDL-GSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFR 748
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.149e-14
Identity = 78/278 (28.06%), Postives = 139/278 (50.00%), Query Frame = 1 
Query:  391 SMTRRREAAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDESKNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVLFLVNSIGD-MEVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVAXXXXXXXXXXXXXAQKRASRILEILRVDK 1221
            S+  +REA  ++R+LA+   + R  +A   AIP LV++L  +   +     +    L++   ND NK+ I + G++  ++ ++++  G          A    LS ++  K  IG + +I  LV  L S     S   K+DA  AL+NLSI+  N   V+E   V +LV  +     + E+A+ +L+NL + REG+ AI   +  IP+LV+V+    S   +E A+  L+ +   S      +I  GV   L+ L+  G+   +++A  +L+  +  +
Sbjct:  434 SLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSI---NDNNKSLIAESGAIVPLIHVLKT--GYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGS----GSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGE-EGGIPVLVEVVE-LGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHR 700
[Close]
BLAST of Vigun08g049500.3 vs. DB:Swiss
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.313e-13
Identity = 75/243 (30.86%), Postives = 127/243 (52.26%), Query Frame = 1 
Query:  403 RREAAWKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDESKNXXXXXXXXXXXXXXXGIGNDANKAAIVKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVLFLVNSIGDME--VTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEA 1125
            RR AA ++RLLAK++   R  +A  GAIP LV +L  S ND      ++ ++LNL I  +     +   G+V  ++ +++          E   A    LS +D NK  IG++ +I  LV  L     + S + K+DA  AL+NL I+  N    +   LV  L+  + + E  + + +L+IL+ L S  +G+  + A  D++P+LVD +  + SP  +E ++ +L+   H    ++Q +IEA
Sbjct:  372 RRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTIS-NDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKG---SMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLS----EGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAA-DAVPVLVDFIR-SGSPRNKENSAAVLV---HLCSWNQQHLIEA 601
The following BLAST results are available for this feature:
BLAST of Vigun08g049500.3 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PUB6_ARATH2.502e-2130.09U-box domain-containing protein 6 OS=Arabidopsis t... [more]
PUB7_ARATH1.811e-2030.28U-box domain-containing protein 7 OS=Arabidopsis t... [more]
PUB12_ORYSJ2.579e-1832.60U-box domain-containing protein 12 OS=Oryza sativa... [more]
PUB4_ARATH5.441e-1729.41U-box domain-containing protein 4 OS=Arabidopsis t... [more]
PUB13_ARATH1.766e-1531.28U-box domain-containing protein 13 OS=Arabidopsis ... [more]
PUB14_ARATH2.026e-1529.89U-box domain-containing protein 14 OS=Arabidopsis ... [more]
PUB45_ARATH3.837e-1529.85U-box domain-containing protein 45 OS=Arabidopsis ... [more]
PUB3_ARATH4.918e-1530.48U-box domain-containing protein 3 OS=Arabidopsis t... [more]
PUB2_ARATH6.149e-1428.06U-box domain-containing protein 2 OS=Arabidopsis t... [more]
PUB12_ARATH1.313e-1330.86U-box domain-containing protein 12 OS=Arabidopsis ... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 441..461
NoneNo IPR availableCOILSCoilCoilcoord: 93..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..86
IPR000225ArmadilloSMARTSM00185arm_5coord: 149..191
e-value: 5.3
score: 15.4
coord: 237..281
e-value: 20.0
score: 10.9
coord: 193..236
e-value: 16.0
score: 11.6
coord: 282..320
e-value: 94.0
score: 5.7
coord: 324..363
e-value: 130.0
score: 4.7
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 160..204
score: 11.497
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 83..413
e-value: 1.8E-33
score: 117.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 114..403

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g049500.3_Vu_IT97K-499-35_v1.1 ID=Vigun08g049500.3_Vu_IT97K-499-35_v1.1; Name=Vigun08g049500.3; organism=Vigna unguiculata; type=mRNA; length=2684bp
GCAACTATAAATATTGAAGAGAAGGCAGAAACGTGGACTCAACGGTCCCT
TCTCTCTCTACAAAGTTCCCATTcagaaacaaaaacaagaaaaaaaaaac
acaCTCTCTTCTCTCTAGTTTTTTTTTTTCTCTCTCTGCAATGTAGGTCG
CCGGAGATGGCAAACTTCCACCGTAACAACGTCGAGAACGTGGTCCTCGG
TCACCACCGTTCCAAGAGCACCTCCGTCGCCGGTGGCCACTTCCGCCTAT
GGCACTCCCTCTCCACCGCCTCCTTCCGCCGCCTGGTCTTCGATGCCGTC
AGCTGCGGCGCTAGCTCCCGCTACGCAGAGAGATCGGACACGTCCTCCGA
GAAACACCACCACCAAGCGAAACAACAGCACCGGCACAAGACGAAGCTGA
ATAACGCAAAGTCGGAGAAGCTCTCGGATCTGCTGAACCTCGCGGAGGTC
GAAGCTGATGCGGAAACGAGGAAGAAAGAGGACAAACTCGAGGAGCTGAA
AAGCCTAGTGAAGGAGCTTCATGAGGAGGAAGAGAAAGAAGAAGAATCAA
TGACGCGGAGAAGAGAAGCTGCTTGGAAGGTGAGGTTGCTAGCCAAAGAG
GATTTGGAAGTTAGAGGGACGCTCGCGATGCTTGGAGCTATTCCTCCTCT
CGTCGCAATGCTTGATGAATCCAAAAACGACGTCGATTTGCTCGTTGCTT
CTCTCTACGCGCTGCTCAACCTCGGAATTGGAAACGACGCGAATAAAGCA
GCTATTGTGAAAGTTGGGTCAGTTGAGAAGATGCTGAAGCTGATTGAGTC
TCCAGATGGTGTAGATTCTTCGGTTTCTGAAGCAATTGTTGCGAATTTCC
TTGGACTTAGTGCGTTGGATTCGAATAAGCCCATAATTGGGTCTTCGGCT
TCAATTTCTTTCTTAGTTAGAACCCTTCAGAGTTTAGATGACAAGAGTAG
TTCCCAAGCCAAGCAAGATGCTCTACGGGCATTGTACAATCTTTCGATCT
ACCCAGCCAATGTTGCATTCGTTTTGGAAACAGATTTAGTTCTGTTTCTG
GTGAACTCAATAGGGGACATGGAGGTAACTGAAAGAGCCCTTGCGATTCT
CAGCAACTTGGTGTCGACCCGAGAGGGTAGGAAGGCGATTAGCGCAGTGC
AAGATTCGATTCCGATCCTGGTGGATGTGTTGAATTGGACAGATTCGCCA
GAATGCCAGGAGAAGGCGTCCTACATTTTGATGGTTATGGCACACAAGTC
TTATGGGGACAAACAGGCCATGATTGAGGCAGGGGTTGCGTCATCACTGC
TTGAGTTGTCCCTTTTGGGTTCCACATTGGCTCAGAAAAGGGCTTCAAGG
ATACTAGAAATTTTGAGGGTTGACAAAGGGAAACAGATTTCTGGGAGCTA
TGGCTTGGGTGCTGCCGTCTCTGCCCCTATTTGCGGCTCTTCGTCCGCGA
AGCCGGATGACGGAGGGAGGGAGTGTTATGACGAGGAGGAAGATATGATG
AGTGAGGAAAAGAAAGCAGTGAAGCAACTAGTCCAACAGAGTTTGCAGAA
CAACATGAGGAAAATTGTGAAAAGGGCCAATTTGCCTCACGATATTGTAC
CATCGGATCATTTTAAGTCACTCACATCAAGTTCTACTTCGAAGAGCCTA
CCATTTTGAAGAAATGCAGCAGGGAAGAGAGTAGGTTAAAGAGAATAAAC
CTTGAGTGAAGTTAGTGTTCAAATCATAGTTTTGTTGAATATTGAGATTT
TAGGTTGTAGTTATTTTCTAGATCTGCTAAAGTAGCAATTGCATGTCAAA
ATCTTGATATATAATTATAAATTTAAGTTCCTTTTAAGGTTGCATCCTTT
TTTGGTATGTTTTTCAGATCTTACATCTATGCGAGTAAACCCAGTGTTTT
TGAACTGAAAATGAGACCCTCCAAACTATACAAATGGACAATTATCACGG
TGCTGCATAAGTTGTATGATGGGGTGCCTCCCAATCAAGGGTATGGTCTG
CAAAATTGGCTAATCTTAGGGTTGCTTCAGTCAGGCCATCGTTACAAGCG
TCCCTACCTTCAAGGAGTCACTTTCAAACCACAGTACATGTTTGTCTCCC
TACTGGCCCCTACCATATGTTTTATATAAATTAATCTTGCTGGATAAGTG
GGAAGTGTGGTCATCTTTTTCGTATTTTTATATATACAACAGGGACTATT
CACAGTAGTTCTCTATTTGAGAATCTTTATCCCGTTAGTTTGTCAATTTC
ATGTGTTTGGTTATTTCAGGAATCTTTGGATTAAGAGTTGAATATACGTT
GTTCTTTGTTGTCATGCATTTGCAGTGATATTCTTAGCTGTTAACCCCTT
AAATTTTTTGGTTAAAGAATTGATAAATTACCTCTCTGTTTATTTAATGC
CCACATGAACTAGTCTAATGAATTGTTTCTCTTTCAACCAGACGCAGATC
CAAATGGCGTGGAAGAAAGATTACAATATAGATCTCTGATTGGGATGAAA
AGCTGAGCTGTTCGTCGCAAATAAGTATGAAGGGTCATTTTGTTCCCATT
ATGTAAATGTTTCATGATGCCCTTGTGCTTGTGGGGTACGCTCATTTGTA
ATGTTATCTCCTGCTGGTGGCTTTAATTTTGTTGACTTTAGTGTAAATAT
TTTATTGTCAATGTAGTTTTGGTCTTAATTAATT
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protein sequence of Vigun08g049500.3_Vu_IT97K-499-35_v1.1

>Vigun08g049500.3_Vu_IT97K-499-35_v1.1 ID=Vigun08g049500.3_Vu_IT97K-499-35_v1.1; Name=Vigun08g049500.3_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=501bp
MANFHRNNVENVVLGHHRSKSTSVAGGHFRLWHSLSTASFRRLVFDAVSC
GASSRYAERSDTSSEKHHHQAKQQHRHKTKLNNAKSEKLSDLLNLAEVEA
DAETRKKEDKLEELKSLVKELHEEEEKEEESMTRRREAAWKVRLLAKEDL
EVRGTLAMLGAIPPLVAMLDESKNDVDLLVASLYALLNLGIGNDANKAAI
VKVGSVEKMLKLIESPDGVDSSVSEAIVANFLGLSALDSNKPIIGSSASI
SFLVRTLQSLDDKSSSQAKQDALRALYNLSIYPANVAFVLETDLVLFLVN
SIGDMEVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPEC
QEKASYILMVMAHKSYGDKQAMIEAGVASSLLELSLLGSTLAQKRASRIL
EILRVDKGKQISGSYGLGAAVSAPICGSSSAKPDDGGRECYDEEEDMMSE
EKKAVKQLVQQSLQNNMRKIVKRANLPHDIVPSDHFKSLTSSSTSKSLPF
*
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mRNA from alignment at Vu08:5550652..5554066-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g049500.3_Vu_IT97K-499-35_v1.1 ID=Vigun08g049500.3_Vu_IT97K-499-35_v1.1; Name=Vigun08g049500.3; organism=Vigna unguiculata; type=mRNA; length=3415bp; location=Sequence derived from: Vu08:5550652..5554066- (Vigna unguiculata
GCAACTATAAATATTGAAGAGAAGGCAGAAACGTGGACTCAACGGTCCCT
TCTCTCTCTACAAAGTTCCCATTCAGAAACAAAAACAAGAAAAAAAAAAC
ACACTCTCTTCTCTCTAGTTTTTTTTTTTCTCTCTCTGCAATGTAGGTCG
CCGGAGATGGCAAACTTCCACCGTAACAACGTCGAGAACGTGGTCCTCGG
TCACCACCGTTCCAAGAGCACCTCCGTCGCCGGTGGCCACTTCCGCCTAT
GGCACTCCCTCTCCACCGCCTCCTTCCGCCGCCTGGTCTTCGATGCCGTC
AGCTGCGGCGCTAGCTCCCGCTACGCAGAGAGATCGGACACGTCCTCCGA
GAAACACCACCACCAAGCGAAACAACAGCACCGGCACAAGACGAAGCTGA
ATAACGCAAAGTCGGAGAAGCTCTCGGATCTGCTGAACCTCGCGGAGGTC
GAAGCTGATGCGGAAACGAGGAAGAAAGAGGACAAACTCGAGGAGCTGAA
AAGCCTAGTGAAGGAGCTTCATGAGGAGGAAGAGAAAGAAGAAGAATCAA
TGACGCGGAGAAGAGAAGCTGCTTGGAAGGTGAGGTTGCTAGCCAAAGAG
GATTTGGAAGTTAGAGGGACGCTCGCGATGCTTGGAGCTATTCCTCCTCT
CGTCGCAATGCTTGATGAATCCAAAAACGACGTCGATTTGCTCGTTGCTT
CTCTCTACGCGCTGCTCAACCTCGGAATTGGAAACGACGCGTGGGTTTCT
CTTCCTGTTCTCTTTTTTTTTTTTTGCTTTGTTTTCCTAAGGTTTTGTTT
TTTCATCTTTACTTGGATGAATCATTACGAGTTACGAGGTGTCATTTTCC
ATTAACATTCTTTTTTGTTTGTGGTTAGCTTATTCATTGATGATTGATAC
GTCGCTTCTCATTTCATTTGATCCTCTCTCTTCTTTTCTGATTATTATTA
ATTTTCTTTAAACGTCTGATTATTATTCATTTTCTTTAAACGTCGTCTTT
GCCTGTAAATCCTTCCTTGCTCTTTACTCATTTTATTTTTTTATTTTCTG
TTTTACATTTCTACTTTGCATGAATCAAACATTTTCTTTACACGAGTATT
TAAAAATATTTTTTCCTTACTTTCCAGTTCTGCACATTGTGTGGCCTTTC
ACTGTTTCTTGAATATGTTAGACTAATTCTGATTATTAATTTTTTTTAGC
TGTATAGATATTTCTTGTTCGTTTTTCCGTTCTGCACATGATGTTGCCTT
TGAGTTATTTCTTGAATTCTTTGACTGTAACTTTATGTGATTAACAATAT
AAGTTCGACAATCCTTTTTTCTTCTGTTTAATGTTGGGTGTATTTATATA
CATATATAAATGGTTTATGATTTATTTGTGGTTTTTTACACATGATGTTG
TTGCCGTTCTATTCGTGATTAACGGTAAAGTTATTGATTTGTTTTTAATT
CTTTTGGGTGTGTTTTAACAGGAATAAAGCAGCTATTGTGAAAGTTGGGT
CAGTTGAGAAGATGCTGAAGCTGATTGAGTCTCCAGATGGTGTAGATTCT
TCGGTTTCTGAAGCAATTGTTGCGAATTTCCTTGGACTTAGTGCGTTGGA
TTCGAATAAGCCCATAATTGGGTCTTCGGCTTCAATTTCTTTCTTAGTTA
GAACCCTTCAGAGTTTAGATGACAAGAGTAGTTCCCAAGCCAAGCAAGAT
GCTCTACGGGCATTGTACAATCTTTCGATCTACCCAGCCAATGTTGCATT
CGTTTTGGAAACAGATTTAGTTCTGTTTCTGGTGAACTCAATAGGGGACA
TGGAGGTAACTGAAAGAGCCCTTGCGATTCTCAGCAACTTGGTGTCGACC
CGAGAGGGTAGGAAGGCGATTAGCGCAGTGCAAGATTCGATTCCGATCCT
GGTGGATGTGTTGAATTGGACAGATTCGCCAGAATGCCAGGAGAAGGCGT
CCTACATTTTGATGGTTATGGCACACAAGTCTTATGGGGACAAACAGGCC
ATGATTGAGGCAGGGGTTGCGTCATCACTGCTTGAGTTGTCCCTTTTGGG
TTCCACATTGGCTCAGAAAAGGGCTTCAAGGATACTAGAAATTTTGAGGG
TTGACAAAGGGAAACAGATTTCTGGGAGCTATGGCTTGGGTGCTGCCGTC
TCTGCCCCTATTTGCGGCTCTTCGTCCGCGAAGCCGGATGACGGAGGGAG
GGAGTGTTATGACGAGGAGGAAGATATGATGAGTGAGGAAAAGAAAGCAG
TGAAGCAACTAGTCCAACAGAGTTTGCAGAACAACATGAGGAAAATTGTG
AAAAGGGCCAATTTGCCTCACGATATTGTACCATCGGATCATTTTAAGTC
ACTCACATCAAGTTCTACTTCGAAGAGCCTACCATTTTGAAGAAATGCAG
CAGGGAAGAGAGTAGGTTAAAGAGAATAAACCTTGAGTGAAGTTAGTGTT
CAAATCATAGTTTTGTTGAATATTGAGATTTTAGGTTGTAGTTATTTTCT
AGATCTGCTAAAGTAGCAATTGCATGTCAAAATCTTGATATATAATTATA
AATTTAAGTTCCTTTTAAGGTTGCATCCTTTTTTGGTATGTTTTTCAGAT
CTTACATCTATGCGAGTAAACCCAGTGTTTTTGAACTGAAAATGAGACCC
TCCAAACTATACAAATGGACAATTATCACGGTGCTGCATAAGTTGTATGA
TGGGGTGCCTCCCAATCAAGGGTATGGTCTGCAAAATTGGCTAATCTTAG
GGTTGCTTCAGTCAGGCCATCGTTACAAGCGTCCCTACCTTCAAGGAGTC
ACTTTCAAACCACAGTACATGTTTGTCTCCCTACTGGCCCCTACCATATG
TTTTATATAAATTAATCTTGCTGGATAAGTGGGAAGTGTGGTCATCTTTT
TCGTATTTTTATATATACAACAGGGACTATTCACAGTAGTTCTCTATTTG
AGAATCTTTATCCCGTTAGTTTGTCAATTTCATGTGTTTGGTTATTTCAG
GAATCTTTGGATTAAGAGTTGAATATACGTTGTTCTTTGTTGTCATGCAT
TTGCAGTGATATTCTTAGCTGTTAACCCCTTAAATTTTTTGGTTAAAGAA
TTGATAAATTACCTCTCTGTTTATTTAATGCCCACATGAACTAGTCTAAT
GAATTGTTTCTCTTTCAACCAGACGCAGATCCAAATGGCGTGGAAGAAAG
ATTACAATATAGATCTCTGATTGGGATGAAAAGCTGAGCTGTTCGTCGCA
AATAAGTATGAAGGGTCATTTTGTTCCCATTATGTAAATGTTTCATGATG
CCCTTGTGCTTGTGGGGTACGCTCATTTGTAATGTTATCTCCTGCTGGTG
GCTTTAATTTTGTTGACTTTAGTGTAAATATTTTATTGTCAATGTAGTTT
TGGTCTTAATTAATT
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Coding sequence (CDS) from alignment at Vu08:5550652..5554066-

>Vigun08g049500.3_Vu_IT97K-499-35_v1.1 ID=Vigun08g049500.3_Vu_IT97K-499-35_v1.1; Name=Vigun08g049500.3; organism=Vigna unguiculata; type=CDS; length=1503bp; location=Sequence derived from: Vu08:5550652..5554066- (Vigna unguiculata
ATGGCAAACTTCCACCGTAACAACGTCGAGAACGTGGTCCTCGGTCACCA
CCGTTCCAAGAGCACCTCCGTCGCCGGTGGCCACTTCCGCCTATGGCACT
CCCTCTCCACCGCCTCCTTCCGCCGCCTGGTCTTCGATGCCGTCAGCTGC
GGCGCTAGCTCCCGCTACGCAGAGAGATCGGACACGTCCTCCGAGAAACA
CCACCACCAAGCGAAACAACAGCACCGGCACAAGACGAAGCTGAATAACG
CAAAGTCGGAGAAGCTCTCGGATCTGCTGAACCTCGCGGAGGTCGAAGCT
GATGCGGAAACGAGGAAGAAAGAGGACAAACTCGAGGAGCTGAAAAGCCT
AGTGAAGGAGCTTCATGAGGAGGAAGAGAAAGAAGAAGAATCAATGACGC
GGAGAAGAGAAGCTGCTTGGAAGGTGAGGTTGCTAGCCAAAGAGGATTTG
GAAGTTAGAGGGACGCTCGCGATGCTTGGAGCTATTCCTCCTCTCGTCGC
AATGCTTGATGAATCCAAAAACGACGTCGATTTGCTCGTTGCTTCTCTCT
ACGCGCTGCTCAACCTCGGAATTGGAAACGACGCGAATAAAGCAGCTATT
GTGAAAGTTGGGTCAGTTGAGAAGATGCTGAAGCTGATTGAGTCTCCAGA
TGGTGTAGATTCTTCGGTTTCTGAAGCAATTGTTGCGAATTTCCTTGGAC
TTAGTGCGTTGGATTCGAATAAGCCCATAATTGGGTCTTCGGCTTCAATT
TCTTTCTTAGTTAGAACCCTTCAGAGTTTAGATGACAAGAGTAGTTCCCA
AGCCAAGCAAGATGCTCTACGGGCATTGTACAATCTTTCGATCTACCCAG
CCAATGTTGCATTCGTTTTGGAAACAGATTTAGTTCTGTTTCTGGTGAAC
TCAATAGGGGACATGGAGGTAACTGAAAGAGCCCTTGCGATTCTCAGCAA
CTTGGTGTCGACCCGAGAGGGTAGGAAGGCGATTAGCGCAGTGCAAGATT
CGATTCCGATCCTGGTGGATGTGTTGAATTGGACAGATTCGCCAGAATGC
CAGGAGAAGGCGTCCTACATTTTGATGGTTATGGCACACAAGTCTTATGG
GGACAAACAGGCCATGATTGAGGCAGGGGTTGCGTCATCACTGCTTGAGT
TGTCCCTTTTGGGTTCCACATTGGCTCAGAAAAGGGCTTCAAGGATACTA
GAAATTTTGAGGGTTGACAAAGGGAAACAGATTTCTGGGAGCTATGGCTT
GGGTGCTGCCGTCTCTGCCCCTATTTGCGGCTCTTCGTCCGCGAAGCCGG
ATGACGGAGGGAGGGAGTGTTATGACGAGGAGGAAGATATGATGAGTGAG
GAAAAGAAAGCAGTGAAGCAACTAGTCCAACAGAGTTTGCAGAACAACAT
GAGGAAAATTGTGAAAAGGGCCAATTTGCCTCACGATATTGTACCATCGG
ATCATTTTAAGTCACTCACATCAAGTTCTACTTCGAAGAGCCTACCATTT
TGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding