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Transcript Overview
| Name | Vigun08g063100.1 |
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| Unique Name | Vigun08g063100.1_Vu_IT97K-499-35_v1.1 |
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| Type | mRNA |
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| Organism | Vigna unguiculata (cowpea) |
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| Sequence length | 1112 |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun08g063100.1 | Vigun08g063100.1_Vu_IT97K-499-35_v1.1-protein | Vigna unguiculata | polypeptide |
| Vigun08g063100.1_Vu_IT97K-499-35_v1.1 | Vigun08g063100.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun08g063100.1.v1.1.five_prime_UTR.1 | Vigun08g063100.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
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| Vigun08g063100.1.v1.1.CDS.1 | Vigun08g063100.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun08g063100.1.v1.1.CDS.2 | Vigun08g063100.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun08g063100.1.v1.1.CDS.3 | Vigun08g063100.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
| Vigun08g063100.1.v1.1.CDS.4 | Vigun08g063100.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Vigun08g063100.1.v1.1.three_prime_UTR.1 | Vigun08g063100.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1 | Vigna unguiculata | three_prime_UTR |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..87 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 56..72 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g063100.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g063100.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g063100.1; organism=Vigna unguiculata; type=mRNA; length=1112bp
TGAGGGAAGATTGTGGTAGCTAAGGCTCCTTATAAAATCCCCTTCAAAGA
CAGATAACGACTGCTTCACTTATCTTACTAAACTAACCCTTCCTTTTTTC
TTCATTCTTGTCTTCTCTCTTTCTCTCTCCCTCAACTCTACAATGCCACC
AGCCAAACGCAAGCCCGCCCAACCGGCGCCGGCTGCGGCGGCTCCGGTGA
GGGTCACTCGTGCGGCAGCCAAGCGCTCCGCCTTGGCCACCTCCGACCCT
CCGCCGGAAGAGAAGAAAGCCAAGAAGGCAAAGAAGGCCAAGGCCAGCAG
TGGCGGTAGgaagaagaagaacgagaaagaagaaagtgctccggttaaag
cagataaagaggaagaaatagaagaagatgaagaagaagGGGCTTCCAGC
AAGACTATCGTTGTTGAACACTGTAAGCAATGTAACCAGTTCAAGATGAG
GGCCAATCTGGTGAAAGAACGTCTGGAGAAAGCGGACTGTGGAGTCAATG
TGATACTGAACCCTGAAAAGCCAAGAAGAGGTTGCTTTGAAATACGGGAA
GAAGGTGGCAAGAAGTTCATCAGTCTCTTGGACATGAAGCGACCATTTAA
ACCAATGAGGGATCTAGACATGGACCAGGTCATTTCGGATATCATTGATG
AGATATCAAACACTTAGTTAACTTTAGTTGTTTCGTATGTTCTATGTTTT
GGCTTGACTTGAAGTGAAGCTACATAAATTGTTCTAATGTTAGAATTCCT
GCAATGGAAACCTGTCCATAATTTGTTTACCAGTTGTATGTGGTTGCTAG
TTTGAGGTTGACACAGTTTGAGAGGAGAGACAGTCTTTTTGGATATGTTG
TTGACTGTCTCAAATGAGTACCAATAGGTTTCAGGTTTCATTTGTGTTTC
AGATTAAATTTACAGGATATGTTATCAAAACATTTTGTATGTTTTTCTAT
TATGGTTTCAGTTGTTTTAGATGCTCTTGTTTGTAATCTCAAAATCCATA
ATTGTGTTGGAAGGTTGAGCAATAGTATCATCTTCCTCTGTTATTGTTCT
GTCACCTTTATGTTTTTTGTGAAACTCAAATTGGGATATGAATTTTCTTT
CATTTTCTGATC back to topprotein sequence of Vigun08g063100.1_Vu_IT97K-499-35_v1.1 >Vigun08g063100.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g063100.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g063100.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=175bp
MPPAKRKPAQPAPAAAAPVRVTRAAAKRSALATSDPPPEEKKAKKAKKAK
ASSGGRKKKNEKEESAPVKADKEEEIEEDEEEGASSKTIVVEHCKQCNQF
KMRANLVKERLEKADCGVNVILNPEKPRRGCFEIREEGGKKFISLLDMKR
PFKPMRDLDMDQVISDIIDEISNT* back to topmRNA from alignment at Vu08:8674672..8677026+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Vigun08g063100.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g063100.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g063100.1; organism=Vigna unguiculata; type=mRNA; length=2355bp; location=Sequence derived from: Vu08:8674672..8677026+ (Vigna unguiculata
TGAGGGAAGATTGTGGTAGCTAAGGCTCCTTATAAAATCCCCTTCAAAGA
CAGATAACGACTGCTTCACTTATCTTACTAAACTAACCCTTCCTTTTTTC
TTCATTCTTGTCTTCTCTCTTTCTCTCTCCCTCAACTCTACAATGCCACC
AGCCAAACGCAAGCCCGCCCAACCGGCGCCGGCTGCGGCGGCTCCGGTGA
GGGTCACTCGTGCGGCAGCCAAGCGCTCCGCCTTGGCCACCTCCGACCCT
CCGCCGGAAGAGAAGAAAGCCAAGAAGGCAAAGAAGGCCAAGGCCAGCAG
TGGCGGTAGGAAGAAGAAGAACGAGAAAGAAGAAAGTGCTCCGGTTAAAG
CAGATAAAGAGGAAGAAATAGAAGAAGATGAAGAAGAAGGGGCTTCCAGC
AAGACTATCGTTGTTGAACACTGGTTCGTCCCTTTCTCCTTCTGCTCGTT
TTGGTTCATGGGTAAATTAAAAATGTTTCTTTTTGTATTCTGTGGCTGTG
TGTGCTTTCATTTATGTGTATTATTTGAAATAACTTTATCAAAATTTTGT
TTGTTTGAAAAAGGTTCTTTAAGTTTTACAAGGTAACGACTTGGTTAATA
GTTTTTTGGGGTTAAAGGAAAGACATAAGAGGAAAATAAGAGTTAGTTGT
TTCCATTAGTTGAATAACTTTGTTAAATGTTTTTGAGAAATTTTTTGTTG
CTGTTATGATAGTATTATTTGGTCTGAAAGTGTTGATATGATGTGTTATT
TGTTGCAGTTTCTCTTCAATATCATTTTATGTATTTATTGTGGGTTGCCA
ATGGGTATTTGATTTTGTTGTTGTTGTTACTTGGTTCATTTGTTGAGGCC
AAAGATCTTGCCTTGTGTGTGTGTGTGTGTGTGTTGGTGATGTTGTTATC
GGCACTTTCTATATAATGTGTTGTTTGTTGTTATTTGTTATTCTTAGTAA
GCAATGTAACCAGTTCAAGATGAGGGCCAATCTGGTGAAAGAACGTCTGG
AGAAAGCGGACTGTGGAGTCAATGTGATACTGAACCCTGAAAAGGTATAT
ATACTGTGATAGTTATTGGTAAATCTTTTGTTTTATCAAGTTTTGGAAGT
GTCTTAAGTCATTGATCTATTTTCTTAAAACTTTTGGTTCAAAATGTGTG
GTGTTTTGTTCAATAGTCTTTCTTGCTACCCACTTATCAAGTGTAACCTT
TGTTTAGATGTTGGGAAAACTTGTGACACCAACAGCTGATGCAGCTCAAT
CGTGAAAGCCCCATTGACTGTGATTTTGTGAATGAAATTGTGGTCATGAA
CTGTTTTTGAAAACCTCAATTATAAGCAAAATGGACTATTGTTCTTTGTA
TATACTATATATTATATACTGTTTAGGGTAGTTTTAATACTGAGTTAGAG
AATGCACTATTGTTTTGTGTAGATCATTGTTAAGACTTCTGAGTTCTGAA
CACAATGATTACTGAGTTTCATATGATATTTTATTTGAGTAATTTTTCTT
CTTTAAGTTTGGTTATAGACAATTTGAACTGATTATTTCTTCTCTCCTTT
TTTATTCAATGAAAAGCCAAGAAGAGGTTGCTTTGAAATACGGGAAGAAG
GTGGCAAGAAGTTCATCAGTCTCTTGGTAATAATGAACTATATTTGGAAA
TCAGTGTGCTGAGTTGTTAATCATCTGAGTTGAATTGAAAGTATTCTGAT
ATAAACTGTTTAACTGAAGATGCATTTCTTCTGGTGAAAATGATTTTGGA
AAGGAAAACAGAACATCAATTTTGCTGTCATCTGAAACATGCAGAGTGGT
TTACAAACTATGTTTTGTTTCAGGACATGAAGCGACCATTTAAACCAATG
AGGGATCTAGACATGGACCAGGTCATTTCGGATATCATTGATGAGATATC
AAACACTTAGTTAACTTTAGTTGTTTCGTATGTTCTATGTTTTGGCTTGA
CTTGAAGTGAAGCTACATAAATTGTTCTAATGTTAGAATTCCTGCAATGG
AAACCTGTCCATAATTTGTTTACCAGTTGTATGTGGTTGCTAGTTTGAGG
TTGACACAGTTTGAGAGGAGAGACAGTCTTTTTGGATATGTTGTTGACTG
TCTCAAATGAGTACCAATAGGTTTCAGGTTTCATTTGTGTTTCAGATTAA
ATTTACAGGATATGTTATCAAAACATTTTGTATGTTTTTCTATTATGGTT
TCAGTTGTTTTAGATGCTCTTGTTTGTAATCTCAAAATCCATAATTGTGT
TGGAAGGTTGAGCAATAGTATCATCTTCCTCTGTTATTGTTCTGTCACCT
TTATGTTTTTTGTGAAACTCAAATTGGGATATGAATTTTCTTTCATTTTC
TGATC back to topCoding sequence (CDS) from alignment at Vu08:8674672..8677026+ >Vigun08g063100.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g063100.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g063100.1; organism=Vigna unguiculata; type=CDS; length=525bp; location=Sequence derived from: Vu08:8674672..8677026+ (Vigna unguiculata
ATGCCACCAGCCAAACGCAAGCCCGCCCAACCGGCGCCGGCTGCGGCGGC
TCCGGTGAGGGTCACTCGTGCGGCAGCCAAGCGCTCCGCCTTGGCCACCT
CCGACCCTCCGCCGGAAGAGAAGAAAGCCAAGAAGGCAAAGAAGGCCAAG
GCCAGCAGTGGCGGTAGGAAGAAGAAGAACGAGAAAGAAGAAAGTGCTCC
GGTTAAAGCAGATAAAGAGGAAGAAATAGAAGAAGATGAAGAAGAAGGGG
CTTCCAGCAAGACTATCGTTGTTGAACACTGTAAGCAATGTAACCAGTTC
AAGATGAGGGCCAATCTGGTGAAAGAACGTCTGGAGAAAGCGGACTGTGG
AGTCAATGTGATACTGAACCCTGAAAAGCCAAGAAGAGGTTGCTTTGAAA
TACGGGAAGAAGGTGGCAAGAAGTTCATCAGTCTCTTGGACATGAAGCGA
CCATTTAAACCAATGAGGGATCTAGACATGGACCAGGTCATTTCGGATAT
CATTGATGAGATATCAAACACTTAG back to top
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