Vigun08g211300.1

Transcript Overview
NameVigun08g211300.1
Unique NameVigun08g211300.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1403
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:37299540..37301638 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL346Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL166Pisum sativum Cameor genome v1aPisum sativum
crvuL191Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL557Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL701Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL135Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0194Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0770Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0814Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0636Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1011Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1203Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL199Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL706Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR570Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR596Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL088Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL081Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL286Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL267Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL081Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL447Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL383Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL825Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL828Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR389Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR398Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL128Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL120Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL598Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL138Cicer arietinum
carvuL386Cicer arietinum
ccavuL423Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL658Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR678Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR693Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR689Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR736Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL287Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL435Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL438Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL301Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL459Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL481Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL616Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR447Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.1g227640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_00827Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014647223.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
XM_058890717.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan07g010500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.1g281520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr08.1001788Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Psat02G0017100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.03G011800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr08.824Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va07G002380.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg226.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_12658.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.03G017100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_006111Cajanus cajan Asha genome v1.0Cajanus cajan
Psat2g006800.1Pisum sativum Cameor genome v1aPisum sativum
Vum_03G00138.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g211300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g211300Vigun08g211300_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g211300.1Vigun08g211300.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g211300.1_Vu_IT97K-499-35_v1.1Vigun08g211300.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g211300.1.v1.1.CDS.2Vigun08g211300.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g211300.1.v1.1.CDS.1Vigun08g211300.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g211300.1.v1.1.three_prime_UTR.1Vigun08g211300.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g211300.1.v1.1.five_prime_UTR.1Vigun08g211300.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
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BLAST of Vigun08g211300.1 vs. DB:Swiss
Match: RCCR_ARATH (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RCCR PE=1 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 5.185e-97
Identity = 152/282 (53.90%), Postives = 206/282 (73.05%), Query Frame = 1 
Query:  160 ETQETHH-HGRSKFIDFPFVSSAQKNLMVELVSMLEDRFHSQLLPCALPSDVQYYQSQTGTAQASLHIRSATDDSPVDFVLGSWVHSELPTGGSLDITSLSAYLNSSTDAPNFVFEMIRSSPTMLVLILDLTPRKDLVLWPDDLKTFYEDTQLDTHRQALERVPEVQPYFSSSLYIRTVSSPTAIMVRIVTENGGVERMEEIIRDHLDPISKQVLGIWLDHCACAKRD---VGEAERAYLKKRDGLIRNKTIEIDLGSSFPRLFGPEVANRVLEAIKGYFTV 993
            ++ E H  H R KF++FP+VS  +K LMV+L+S +E+R  SQLLPC LP DV+ + +  G+A+ASLHIRS    SP+DFV+GSW+H ++PTG SL+ITS+S +LNSST APNFV E+I+SS   LVLILDL  RKDLVL PD LK +Y+DT LD+HRQ+L ++PEV PY S SL++R+  SPTA M++I  E    +++EEI+RDH+ P +K+VL +WL+ C   + +   VGE ER  L++RD   R K+IE DL   FPR+FG EV++RV+ AIK  F V
Sbjct:   39 QSMEDHDDHLRRKFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGDKSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEEE--DKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSIEDDLDLQFPRMFGEEVSSRVVHAIKEAFGV 318
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BLAST of Vigun08g211300.1 vs. DB:Swiss
Match: RCCR_HORVU (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare OX=4513 GN=rccR PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.245e-61
Identity = 92/203 (45.32%), Postives = 141/203 (69.46%), Query Frame = 1 
Query:  385 VDFVLGSWVHSELPTGGSLDITSLSAYLNSSTDAPNFVFEMIRSSPTMLVLILDLTPRKDLVLWPDDLKTFYEDTQLDTHRQALERVPEVQPYFSSSLYIRTVSSPTAIMVRIVTENGGVERMEEIIRDHLDPISKQVLGIWLDHCACAKRDVGEAERAYLKKRDGLIRNKTIEIDLGSSFPRLFGPEVANRVLEAIKGYFTV 993
            +DF+L S +H ++P G ++DITSL   LN+STDAP+F+ E I+ SPT +V++LDL PRKDL L P+ ++ +YEDT++D  R+ +E++P+ +PY S SL++R+  SPTA+   I    GG   +EEI+  HL  + K +L IWLD CA    ++ E ER  + KRD  +R+K+IE+DL ++ PR+FGP+V+ R++  I+  F V
Sbjct:    1 IDFMLQSSLHCKVPNG-AIDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKDLALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKGGEGTLEEIVHGHLASVVKGILQIWLDTCASDASEMEEGEREIMVKRDRTVRSKSIEVDLTANLPRMFGPDVSGRIIAEIRKAFGV 202
The following BLAST results are available for this feature:
BLAST of Vigun08g211300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
RCCR_ARATH5.185e-9753.90Red chlorophyll catabolite reductase, chloroplasti... [more]
RCCR_HORVU1.245e-6145.32Red chlorophyll catabolite reductase (Fragment) OS... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1500.20coord: 59..331
e-value: 1.4E-104
score: 350.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..52
IPR009439Red chlorophyll catabolite reductasePFAMPF06405RCC_reductasecoord: 75..326
e-value: 1.2E-121
score: 404.7

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g211300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g211300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g211300.1; organism=Vigna unguiculata; type=mRNA; length=1403bp
GAACTCATAATGAATAACGTGAAGAAAGAAAACAGTGTGAAAGTATGAAA
ACAGTGCGAGAGAGAGAGTAAAGCAGAGTTGTGGAATAATAGTTACAGGT
GATGGAAGTGATGATCTGTGACCATTTTCGGTGTTCACCACTCTCCATCT
TATCTTCTTTTTCTCCTTCAACACGTTACCCTCTCTCTCTACCTTCTTAT
TCTTCTTCTTCTTTAAGGTTTAAACCTTCTTCTTCATCTCTCTCTTCCTC
TCGCATGGAGGAGACCCAGGAGACCCACCACCATGGCCGCTCCAAATTCA
TCGACTTTCCGTTTGTTTCATCTGCCCAGAAGAATCTCATGGTCGAACTC
GTATCGATGCTTGAGGATCGTTTTCATTCTCAGCTTCTTCCTTGCGCACT
TCCCTCTGATGTTCAGTATTACCAAAGCCAAACTGGCACTGCCCAAGCTT
CCCTTCATATCAGATCAGCCACTGATGACTCTCCGGTAGATTTTGTGTTG
GGAAGCTGGGTGCACTCTGAGTTACCAACAGGAGGGTCCTTAGATATAAC
TAGTCTTTCAGCCTATCTTAACAGTTCTACTGATGCACCAAATTTTGTGT
TTGAAATGATCCGCAGTAGTCCAACAATGCTAGTTCTCATTCTTGATTTG
ACTCCCCGGAAAGACCTTGTGCTTTGGCCAGATGACCTCAAAACTTTCTA
TGAAGACACTCAATTGGATACTCACAGGCAGGCTCTGGAAAGAGTTCCAG
AGGTTCAACCATATTTCTCTTCTTCCCTTTACATCCGCACTGTTTCCTCC
CCTACAGCCATAATGGTTCGCATTGTGACTGAAAATGGTGGAGTAGAACG
CATGGAGGAGATCATCAGGGACCATTTGGACCCCATTTCAAAGCAAGTAC
TGGGGATCTGGTTGGATCATTGTGCTTGTGCCAAGCGAGATGTTGGAGAG
GCAGAAAGAGCTTATCTGAAAAAAAGGGATGGTCTCATTAGAAACAAGAC
AATTGAGATTGATCTTGGTTCAAGCTTCCCCAGGTTGTTTGGTCCAGAAG
TAGCAAACCGAGTACTGGAAGCTATCAAGGGATATTTTACTGTCTAGGAT
TCTAATTTATTTGAAATTGTTGGACATTCTGTGTTACATACATGTATCTA
ATTAGCCTTGTAGTCAAATGAGGCttcagtattcgatgtatctgtattct
gtagtcaagtatGAAATCCATAAATGATTATGATAGTTTCTGCTTTCTAC
TTTCTCCCTTCTTTTCTTTGCCAGTCTAAGGATGATTCATATGACAACGG
CACTTTTCTAAGCCTTTATTGAAATCATTCCAAGCTCTTTCTAGGACTTG
AGTTAGAAATCCCTCGACTAACTTCCTGAACTAGAAGCAAAATTTTTAAA
TTG
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protein sequence of Vigun08g211300.1_Vu_IT97K-499-35_v1.1

>Vigun08g211300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g211300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g211300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=332bp
MEVMICDHFRCSPLSILSSFSPSTRYPLSLPSYSSSSLRFKPSSSSLSSS
RMEETQETHHHGRSKFIDFPFVSSAQKNLMVELVSMLEDRFHSQLLPCAL
PSDVQYYQSQTGTAQASLHIRSATDDSPVDFVLGSWVHSELPTGGSLDIT
SLSAYLNSSTDAPNFVFEMIRSSPTMLVLILDLTPRKDLVLWPDDLKTFY
EDTQLDTHRQALERVPEVQPYFSSSLYIRTVSSPTAIMVRIVTENGGVER
MEEIIRDHLDPISKQVLGIWLDHCACAKRDVGEAERAYLKKRDGLIRNKT
IEIDLGSSFPRLFGPEVANRVLEAIKGYFTV*
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mRNA from alignment at Vu08:37299540..37301638-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g211300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g211300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g211300.1; organism=Vigna unguiculata; type=mRNA; length=2099bp; location=Sequence derived from: Vu08:37299540..37301638- (Vigna unguiculata
GAACTCATAATGAATAACGTGAAGAAAGAAAACAGTGTGAAAGTATGAAA
ACAGTGCGAGAGAGAGAGTAAAGCAGAGTTGTGGAATAATAGTTACAGGT
GATGGAAGTGATGATCTGTGACCATTTTCGGTGTTCACCACTCTCCATCT
TATCTTCTTTTTCTCCTTCAACACGTTACCCTCTCTCTCTACCTTCTTAT
TCTTCTTCTTCTTTAAGGTTTAAACCTTCTTCTTCATCTCTCTCTTCCTC
TCGCATGGAGGAGACCCAGGAGACCCACCACCATGGCCGCTCCAAATTCA
TCGACTTTCCGTTTGTTTCATCTGCCCAGAAGAATCTCATGGTCGAACTC
GTATCGATGCTTGAGGATCGTTTTCATTCTCAGCTTCTTCCTTGCGCACT
TCCCTCTGATGTTCAGTATTACCAAAGCCAAACTGGCACTGCCCAAGCTT
CCCTTCATATCAGATCAGCCACTGATGACTCTCCGGTGAATTTTTCCTTC
TCAACTTCCTCAATTTCAATACAAAGTTTTCATCTTTCTTTTCTCTTGTG
TTTATTTTTCCTCCCAATGTCGTTTTTTTCCTTGTTTTTTAGTGATTGAT
GGATTTTTAAATCAAGTATTGGCGTTAGAAAGAGATCAGAGTTTTGGGTT
GAGAATTAGGTACTCAATCTACTACCATGTCCGGATTAGATTCTGAAGCA
AATTCGCAATCTAGTATTTTTGTCCTTTTCTGTGCTTCAATGAATAAACC
ATTGAATTCATCCCTAAACTATTACTATCTCTCTGTAGTACATAAATTAT
ATAATCTAGCACGAAAGTAAATGTGAGCAATGATTTGATGGGAACAAAAG
AAGCATATTCTCTAGCACATTCCTTCTTAGACTCTTCCTTGTTGATTGAA
ATTTATACTGAAAAATGACAAAATCAGGTGACAATTATTAAATAATGGGG
GAAACCCACCAAAGTTGGTGTTTCCTTAATGATTTTCAATAAATTACAAA
GAGTATGATGCTAACATTATTCCAGAAAGAATCTGTTTCCTCATTGTGAA
TTCCTGGTTTTGTTCTTTGTTAACCTTGTGCTATCACTAAATTTTCTCTA
CCTTCTTCCCAGTGGATTTAGAAGAAAAATGACGGCACTTGTTTTGTACT
GAATTTACTCTTCTTTTTATGTTTGTCTCAGGTAGATTTTGTGTTGGGAA
GCTGGGTGCACTCTGAGTTACCAACAGGAGGGTCCTTAGATATAACTAGT
CTTTCAGCCTATCTTAACAGTTCTACTGATGCACCAAATTTTGTGTTTGA
AATGATCCGCAGTAGTCCAACAATGCTAGTTCTCATTCTTGATTTGACTC
CCCGGAAAGACCTTGTGCTTTGGCCAGATGACCTCAAAACTTTCTATGAA
GACACTCAATTGGATACTCACAGGCAGGCTCTGGAAAGAGTTCCAGAGGT
TCAACCATATTTCTCTTCTTCCCTTTACATCCGCACTGTTTCCTCCCCTA
CAGCCATAATGGTTCGCATTGTGACTGAAAATGGTGGAGTAGAACGCATG
GAGGAGATCATCAGGGACCATTTGGACCCCATTTCAAAGCAAGTACTGGG
GATCTGGTTGGATCATTGTGCTTGTGCCAAGCGAGATGTTGGAGAGGCAG
AAAGAGCTTATCTGAAAAAAAGGGATGGTCTCATTAGAAACAAGACAATT
GAGATTGATCTTGGTTCAAGCTTCCCCAGGTTGTTTGGTCCAGAAGTAGC
AAACCGAGTACTGGAAGCTATCAAGGGATATTTTACTGTCTAGGATTCTA
ATTTATTTGAAATTGTTGGACATTCTGTGTTACATACATGTATCTAATTA
GCCTTGTAGTCAAATGAGGCTTCAGTATTCGATGTATCTGTATTCTGTAG
TCAAGTATGAAATCCATAAATGATTATGATAGTTTCTGCTTTCTACTTTC
TCCCTTCTTTTCTTTGCCAGTCTAAGGATGATTCATATGACAACGGCACT
TTTCTAAGCCTTTATTGAAATCATTCCAAGCTCTTTCTAGGACTTGAGTT
AGAAATCCCTCGACTAACTTCCTGAACTAGAAGCAAAATTTTTAAATTG
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Coding sequence (CDS) from alignment at Vu08:37299540..37301638-

>Vigun08g211300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g211300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g211300.1; organism=Vigna unguiculata; type=CDS; length=996bp; location=Sequence derived from: Vu08:37299540..37301638- (Vigna unguiculata
ATGGAAGTGATGATCTGTGACCATTTTCGGTGTTCACCACTCTCCATCTT
ATCTTCTTTTTCTCCTTCAACACGTTACCCTCTCTCTCTACCTTCTTATT
CTTCTTCTTCTTTAAGGTTTAAACCTTCTTCTTCATCTCTCTCTTCCTCT
CGCATGGAGGAGACCCAGGAGACCCACCACCATGGCCGCTCCAAATTCAT
CGACTTTCCGTTTGTTTCATCTGCCCAGAAGAATCTCATGGTCGAACTCG
TATCGATGCTTGAGGATCGTTTTCATTCTCAGCTTCTTCCTTGCGCACTT
CCCTCTGATGTTCAGTATTACCAAAGCCAAACTGGCACTGCCCAAGCTTC
CCTTCATATCAGATCAGCCACTGATGACTCTCCGGTAGATTTTGTGTTGG
GAAGCTGGGTGCACTCTGAGTTACCAACAGGAGGGTCCTTAGATATAACT
AGTCTTTCAGCCTATCTTAACAGTTCTACTGATGCACCAAATTTTGTGTT
TGAAATGATCCGCAGTAGTCCAACAATGCTAGTTCTCATTCTTGATTTGA
CTCCCCGGAAAGACCTTGTGCTTTGGCCAGATGACCTCAAAACTTTCTAT
GAAGACACTCAATTGGATACTCACAGGCAGGCTCTGGAAAGAGTTCCAGA
GGTTCAACCATATTTCTCTTCTTCCCTTTACATCCGCACTGTTTCCTCCC
CTACAGCCATAATGGTTCGCATTGTGACTGAAAATGGTGGAGTAGAACGC
ATGGAGGAGATCATCAGGGACCATTTGGACCCCATTTCAAAGCAAGTACT
GGGGATCTGGTTGGATCATTGTGCTTGTGCCAAGCGAGATGTTGGAGAGG
CAGAAAGAGCTTATCTGAAAAAAAGGGATGGTCTCATTAGAAACAAGACA
ATTGAGATTGATCTTGGTTCAAGCTTCCCCAGGTTGTTTGGTCCAGAAGT
AGCAAACCGAGTACTGGAAGCTATCAAGGGATATTTTACTGTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR009439RCC_reductase
Vocabulary: Molecular Function
TermDefinition
GO:0051743red chlorophyll catabolite reductase activity